data_1ZI4 # _entry.id 1ZI4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZI4 pdb_00001zi4 10.2210/pdb1zi4/pdb RCSB RCSB032750 ? ? WWPDB D_1000032750 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1ZHJ 'Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with Galactose' unspecified PDB 1ZI1 'Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with Lactose' unspecified PDB 1ZI3 'Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with N-acetyllactosamine' unspecified PDB 1ZJO 'Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with Galactose-grease' unspecified PDB 1ZI5 'Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with H type I Trisaccharide' unspecified PDB 1ZIZ 'Crystal Structure of Human Galactosyltransferase (GTB) Complexed with Galactose' unspecified PDB 1ZJ0 'Crystal Structure of Human Galactosyltransferase (GTB) Complexed with Lactose' unspecified PDB 1ZJ1 'Crystal Structure of Human Galactosyltransferase (GTB) Complexed with N-acetyllactosamine' unspecified PDB 1ZJ2 'Crystal Structure of Human Galactosyltransferase (GTB) Complexed with H type I Trisaccharide' unspecified PDB 1ZJ3 'Crystal Structure of Human Galactosyltransferase (GTB) Complexed with H type II Trisaccharide' unspecified PDB 1ZJP 'Crystal Structure of Human Galactosyltransferase (GTB) Complexed with Galactose-grease' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZI4 _pdbx_database_status.recvd_initial_deposition_date 2005-04-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Letts, J.A.' 1 'Rose, N.L.' 2 'Fang, Y.R.' 3 'Barry, C.H.' 4 'Borisova, S.N.' 5 'Seto, N.O.' 6 'Palcic, M.M.' 7 'Evans, S.V.' 8 # _citation.id primary _citation.title 'Differential Recognition of the Type I and II H Antigen Acceptors by the Human ABO(H) Blood Group A and B Glycosyltransferases.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 281 _citation.page_first 3625 _citation.page_last 3632 _citation.year 2006 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16326711 _citation.pdbx_database_id_DOI 10.1074/jbc.M507620200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Letts, J.A.' 1 ? primary 'Rose, N.L.' 2 ? primary 'Fang, Y.R.' 3 ? primary 'Barry, C.H.' 4 ? primary 'Borisova, S.N.' 5 ? primary 'Seto, N.O.' 6 ? primary 'Palcic, M.M.' 7 ? primary 'Evans, S.V.' 8 ? # _cell.entry_id 1ZI4 _cell.length_a 52.400 _cell.length_b 150.100 _cell.length_c 79.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZI4 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histo-blood group ABO system transferase (NAGAT) Includes: Glycoprotein-fucosylgalactoside alpha-N- acetylgalactosaminyltransferase' 34323.609 1 2.4.1.40 ? ? ? 2 branched man 'alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 529.490 1 ? ? ? ? 3 non-polymer syn 'MERCURY (II) ION' 200.590 4 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 154 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase (Histo-blood group A transferase) (A transferase)' 2 'H type 2 antigen, beta anomer' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EFMVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKH FMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHV GVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVW HDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP ; _entity_poly.pdbx_seq_one_letter_code_can ;EFMVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKH FMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHV GVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVW HDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PHE n 1 3 MET n 1 4 VAL n 1 5 SER n 1 6 LEU n 1 7 PRO n 1 8 ARG n 1 9 MET n 1 10 VAL n 1 11 TYR n 1 12 PRO n 1 13 GLN n 1 14 PRO n 1 15 LYS n 1 16 VAL n 1 17 LEU n 1 18 THR n 1 19 PRO n 1 20 CYS n 1 21 ARG n 1 22 LYS n 1 23 ASP n 1 24 VAL n 1 25 LEU n 1 26 VAL n 1 27 VAL n 1 28 THR n 1 29 PRO n 1 30 TRP n 1 31 LEU n 1 32 ALA n 1 33 PRO n 1 34 ILE n 1 35 VAL n 1 36 TRP n 1 37 GLU n 1 38 GLY n 1 39 THR n 1 40 PHE n 1 41 ASN n 1 42 ILE n 1 43 ASP n 1 44 ILE n 1 45 LEU n 1 46 ASN n 1 47 GLU n 1 48 GLN n 1 49 PHE n 1 50 ARG n 1 51 LEU n 1 52 GLN n 1 53 ASN n 1 54 THR n 1 55 THR n 1 56 ILE n 1 57 GLY n 1 58 LEU n 1 59 THR n 1 60 VAL n 1 61 PHE n 1 62 ALA n 1 63 ILE n 1 64 LYS n 1 65 LYS n 1 66 TYR n 1 67 VAL n 1 68 ALA n 1 69 PHE n 1 70 LEU n 1 71 LYS n 1 72 LEU n 1 73 PHE n 1 74 LEU n 1 75 GLU n 1 76 THR n 1 77 ALA n 1 78 GLU n 1 79 LYS n 1 80 HIS n 1 81 PHE n 1 82 MET n 1 83 VAL n 1 84 GLY n 1 85 HIS n 1 86 ARG n 1 87 VAL n 1 88 HIS n 1 89 TYR n 1 90 TYR n 1 91 VAL n 1 92 PHE n 1 93 THR n 1 94 ASP n 1 95 GLN n 1 96 PRO n 1 97 ALA n 1 98 ALA n 1 99 VAL n 1 100 PRO n 1 101 ARG n 1 102 VAL n 1 103 THR n 1 104 LEU n 1 105 GLY n 1 106 THR n 1 107 GLY n 1 108 ARG n 1 109 GLN n 1 110 LEU n 1 111 SER n 1 112 VAL n 1 113 LEU n 1 114 GLU n 1 115 VAL n 1 116 ARG n 1 117 ALA n 1 118 TYR n 1 119 LYS n 1 120 ARG n 1 121 TRP n 1 122 GLN n 1 123 ASP n 1 124 VAL n 1 125 SER n 1 126 MET n 1 127 ARG n 1 128 ARG n 1 129 MET n 1 130 GLU n 1 131 MET n 1 132 ILE n 1 133 SER n 1 134 ASP n 1 135 PHE n 1 136 CYS n 1 137 GLU n 1 138 ARG n 1 139 ARG n 1 140 PHE n 1 141 LEU n 1 142 SER n 1 143 GLU n 1 144 VAL n 1 145 ASP n 1 146 TYR n 1 147 LEU n 1 148 VAL n 1 149 CYS n 1 150 VAL n 1 151 ASP n 1 152 VAL n 1 153 ASP n 1 154 MET n 1 155 GLU n 1 156 PHE n 1 157 ARG n 1 158 ASP n 1 159 HIS n 1 160 VAL n 1 161 GLY n 1 162 VAL n 1 163 GLU n 1 164 ILE n 1 165 LEU n 1 166 THR n 1 167 PRO n 1 168 LEU n 1 169 PHE n 1 170 GLY n 1 171 THR n 1 172 LEU n 1 173 HIS n 1 174 PRO n 1 175 GLY n 1 176 PHE n 1 177 TYR n 1 178 GLY n 1 179 SER n 1 180 SER n 1 181 ARG n 1 182 GLU n 1 183 ALA n 1 184 PHE n 1 185 THR n 1 186 TYR n 1 187 GLU n 1 188 ARG n 1 189 ARG n 1 190 PRO n 1 191 GLN n 1 192 SER n 1 193 GLN n 1 194 ALA n 1 195 TYR n 1 196 ILE n 1 197 PRO n 1 198 LYS n 1 199 ASP n 1 200 GLU n 1 201 GLY n 1 202 ASP n 1 203 PHE n 1 204 TYR n 1 205 TYR n 1 206 LEU n 1 207 GLY n 1 208 GLY n 1 209 PHE n 1 210 PHE n 1 211 GLY n 1 212 GLY n 1 213 SER n 1 214 VAL n 1 215 GLN n 1 216 GLU n 1 217 VAL n 1 218 GLN n 1 219 ARG n 1 220 LEU n 1 221 THR n 1 222 ARG n 1 223 ALA n 1 224 CYS n 1 225 HIS n 1 226 GLN n 1 227 ALA n 1 228 MET n 1 229 MET n 1 230 VAL n 1 231 ASP n 1 232 GLN n 1 233 ALA n 1 234 ASN n 1 235 GLY n 1 236 ILE n 1 237 GLU n 1 238 ALA n 1 239 VAL n 1 240 TRP n 1 241 HIS n 1 242 ASP n 1 243 GLU n 1 244 SER n 1 245 HIS n 1 246 LEU n 1 247 ASN n 1 248 LYS n 1 249 TYR n 1 250 LEU n 1 251 LEU n 1 252 ARG n 1 253 HIS n 1 254 LYS n 1 255 PRO n 1 256 THR n 1 257 LYS n 1 258 VAL n 1 259 LEU n 1 260 SER n 1 261 PRO n 1 262 GLU n 1 263 TYR n 1 264 LEU n 1 265 TRP n 1 266 ASP n 1 267 GLN n 1 268 GLN n 1 269 LEU n 1 270 LEU n 1 271 GLY n 1 272 TRP n 1 273 PRO n 1 274 ALA n 1 275 VAL n 1 276 LEU n 1 277 ARG n 1 278 LYS n 1 279 LEU n 1 280 ARG n 1 281 PHE n 1 282 THR n 1 283 ALA n 1 284 VAL n 1 285 PRO n 1 286 LYS n 1 287 ASN n 1 288 HIS n 1 289 GLN n 1 290 ALA n 1 291 VAL n 1 292 ARG n 1 293 ASN n 1 294 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ABO _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21Gold _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PCW DELTA 1AC (E-H)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BGAT_HUMAN _struct_ref.pdbx_db_accession P16442 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKHFMV GHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVE ILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDE SHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP ; _struct_ref.pdbx_align_begin 64 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1ZI4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 294 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16442 _struct_ref_seq.db_align_beg 64 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 354 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 64 _struct_ref_seq.pdbx_auth_seq_align_end 354 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ZI4 GLU A 1 ? UNP P16442 ? ? 'cloning artifact' 61 1 1 1ZI4 PHE A 2 ? UNP P16442 ? ? 'cloning artifact' 62 2 1 1ZI4 MET A 3 ? UNP P16442 ? ? 'cloning artifact' 63 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HG non-polymer . 'MERCURY (II) ION' ? 'Hg 2' 200.590 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZI4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-09-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 1ZI4 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 20 _reflns.number_all ? _reflns.number_obs 27035 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1ZI4 _refine.ls_d_res_high 1.85 _refine.ls_d_res_low 20 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27035 _refine.ls_number_reflns_R_free ? _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.204 _refine.ls_R_factor_R_free 0.236 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1LZ0 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2160 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 2355 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 20 # _struct.entry_id 1ZI4 _struct.title 'Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with H type II Trisaccharide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZI4 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'GTA, ABO(H), H-antigen, blood group, glycosyltransferase, retaining, Transferase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 41 ? LEU A 51 ? ASN A 101 LEU A 111 1 ? 11 HELX_P HELX_P2 2 ILE A 63 ? ALA A 68 ? ILE A 123 ALA A 128 5 ? 6 HELX_P HELX_P3 3 PHE A 69 ? PHE A 81 ? PHE A 129 PHE A 141 1 ? 13 HELX_P HELX_P4 4 GLN A 95 ? VAL A 99 ? GLN A 155 VAL A 159 5 ? 5 HELX_P HELX_P5 5 GLU A 137 ? VAL A 144 ? GLU A 197 VAL A 204 1 ? 8 HELX_P HELX_P6 6 GLY A 161 ? LEU A 165 ? GLY A 221 LEU A 225 5 ? 5 HELX_P HELX_P7 7 SER A 180 ? PHE A 184 ? SER A 240 PHE A 244 5 ? 5 HELX_P HELX_P8 8 VAL A 214 ? ASN A 234 ? VAL A 274 ASN A 294 1 ? 21 HELX_P HELX_P9 9 TRP A 240 ? HIS A 253 ? TRP A 300 HIS A 313 1 ? 14 HELX_P HELX_P10 10 PRO A 261 ? LEU A 264 ? PRO A 321 LEU A 324 5 ? 4 HELX_P HELX_P11 11 ASP A 266 ? GLY A 271 ? ASP A 326 GLY A 331 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B NAG . O4 ? ? ? 1_555 B GAL . C1 ? ? B NAG 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.436 sing ? covale2 covale both ? B GAL . O2 ? ? ? 1_555 B FUC . C1 ? ? B GAL 2 B FUC 3 1_555 ? ? ? ? ? ? ? 1.436 sing ? metalc1 metalc ? ? A CYS 20 SG ? ? ? 1_555 F HG . HG ? ? A CYS 80 A HG 404 1_555 ? ? ? ? ? ? ? 2.759 ? ? metalc2 metalc ? ? A GLY 38 O ? ? ? 1_555 F HG . HG ? ? A GLY 98 A HG 404 1_555 ? ? ? ? ? ? ? 2.642 ? ? metalc3 metalc ? ? A THR 59 OG1 ? ? ? 1_555 E HG . HG ? ? A THR 119 A HG 403 1_555 ? ? ? ? ? ? ? 2.866 ? ? metalc4 metalc ? ? A CYS 149 SG ? ? ? 1_555 E HG . HG ? ? A CYS 209 A HG 403 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc5 metalc ? ? A CYS 224 SG ? ? ? 1_555 C HG . HG ? ? A CYS 284 A HG 401 1_555 ? ? ? ? ? ? ? 2.578 ? ? metalc6 metalc ? ? A CYS 224 SG ? ? ? 1_555 G HG . HG ? ? A CYS 284 A HG 405 1_555 ? ? ? ? ? ? ? 2.617 ? ? metalc7 metalc ? ? A HIS 245 O ? ? ? 1_555 G HG . HG ? ? A HIS 305 A HG 405 1_555 ? ? ? ? ? ? ? 3.163 ? ? metalc8 metalc ? ? E HG . HG ? ? ? 1_555 H HOH . O ? ? A HG 403 A HOH 634 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc9 metalc ? ? F HG . HG ? ? ? 1_555 H HOH . O ? ? A HG 404 A HOH 564 1_555 ? ? ? ? ? ? ? 3.528 ? ? metalc10 metalc ? ? G HG . HG ? ? ? 1_555 H HOH . O ? ? A HG 405 A HOH 625 1_555 ? ? ? ? ? ? ? 3.204 ? ? metalc11 metalc ? ? G HG . HG ? ? ? 1_555 H HOH . O ? ? A HG 405 A HOH 626 1_555 ? ? ? ? ? ? ? 2.594 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 34 ? VAL A 35 ? ILE A 94 VAL A 95 A 2 LYS A 257 ? LEU A 259 ? LYS A 317 LEU A 319 A 3 LEU A 168 ? THR A 171 ? LEU A 228 THR A 231 A 4 PHE A 209 ? SER A 213 ? PHE A 269 SER A 273 A 5 TYR A 146 ? VAL A 150 ? TYR A 206 VAL A 210 A 6 THR A 55 ? ALA A 62 ? THR A 115 ALA A 122 A 7 ARG A 86 ? THR A 93 ? ARG A 146 THR A 153 A 8 ARG A 108 ? GLU A 114 ? ARG A 168 GLU A 174 B 1 MET A 154 ? PHE A 156 ? MET A 214 PHE A 216 B 2 PHE A 281 ? ALA A 283 ? PHE A 341 ALA A 343 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 35 ? N VAL A 95 O VAL A 258 ? O VAL A 318 A 2 3 O LEU A 259 ? O LEU A 319 N GLY A 170 ? N GLY A 230 A 3 4 N PHE A 169 ? N PHE A 229 O GLY A 211 ? O GLY A 271 A 4 5 O PHE A 210 ? O PHE A 270 N CYS A 149 ? N CYS A 209 A 5 6 O TYR A 146 ? O TYR A 206 N GLY A 57 ? N GLY A 117 A 6 7 N ALA A 62 ? N ALA A 122 O PHE A 92 ? O PHE A 152 A 7 8 N TYR A 89 ? N TYR A 149 O GLN A 109 ? O GLN A 169 B 1 2 N GLU A 155 ? N GLU A 215 O THR A 282 ? O THR A 342 # _database_PDB_matrix.entry_id 1ZI4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZI4 _atom_sites.fract_transf_matrix[1][1] 0.019084 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006662 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012626 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL HG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 61 61 GLU GLU A . n A 1 2 PHE 2 62 62 PHE PHE A . n A 1 3 MET 3 63 63 MET MET A . n A 1 4 VAL 4 64 64 VAL VAL A . n A 1 5 SER 5 65 65 SER SER A . n A 1 6 LEU 6 66 66 LEU LEU A . n A 1 7 PRO 7 67 67 PRO PRO A . n A 1 8 ARG 8 68 68 ARG ARG A . n A 1 9 MET 9 69 69 MET MET A . n A 1 10 VAL 10 70 70 VAL VAL A . n A 1 11 TYR 11 71 71 TYR TYR A . n A 1 12 PRO 12 72 72 PRO PRO A . n A 1 13 GLN 13 73 73 GLN GLN A . n A 1 14 PRO 14 74 74 PRO PRO A . n A 1 15 LYS 15 75 75 LYS LYS A . n A 1 16 VAL 16 76 76 VAL VAL A . n A 1 17 LEU 17 77 77 LEU LEU A . n A 1 18 THR 18 78 78 THR THR A . n A 1 19 PRO 19 79 79 PRO PRO A . n A 1 20 CYS 20 80 80 CYS CYS A . n A 1 21 ARG 21 81 81 ARG ARG A . n A 1 22 LYS 22 82 82 LYS LYS A . n A 1 23 ASP 23 83 83 ASP ASP A . n A 1 24 VAL 24 84 84 VAL VAL A . n A 1 25 LEU 25 85 85 LEU LEU A . n A 1 26 VAL 26 86 86 VAL VAL A . n A 1 27 VAL 27 87 87 VAL VAL A . n A 1 28 THR 28 88 88 THR THR A . n A 1 29 PRO 29 89 89 PRO PRO A . n A 1 30 TRP 30 90 90 TRP TRP A . n A 1 31 LEU 31 91 91 LEU LEU A . n A 1 32 ALA 32 92 92 ALA ALA A . n A 1 33 PRO 33 93 93 PRO PRO A . n A 1 34 ILE 34 94 94 ILE ILE A . n A 1 35 VAL 35 95 95 VAL VAL A . n A 1 36 TRP 36 96 96 TRP TRP A . n A 1 37 GLU 37 97 97 GLU GLU A . n A 1 38 GLY 38 98 98 GLY GLY A . n A 1 39 THR 39 99 99 THR THR A . n A 1 40 PHE 40 100 100 PHE PHE A . n A 1 41 ASN 41 101 101 ASN ASN A . n A 1 42 ILE 42 102 102 ILE ILE A . n A 1 43 ASP 43 103 103 ASP ASP A . n A 1 44 ILE 44 104 104 ILE ILE A . n A 1 45 LEU 45 105 105 LEU LEU A . n A 1 46 ASN 46 106 106 ASN ASN A . n A 1 47 GLU 47 107 107 GLU GLU A . n A 1 48 GLN 48 108 108 GLN GLN A . n A 1 49 PHE 49 109 109 PHE PHE A . n A 1 50 ARG 50 110 110 ARG ARG A . n A 1 51 LEU 51 111 111 LEU LEU A . n A 1 52 GLN 52 112 112 GLN GLN A . n A 1 53 ASN 53 113 113 ASN ASN A . n A 1 54 THR 54 114 114 THR THR A . n A 1 55 THR 55 115 115 THR THR A . n A 1 56 ILE 56 116 116 ILE ILE A . n A 1 57 GLY 57 117 117 GLY GLY A . n A 1 58 LEU 58 118 118 LEU LEU A . n A 1 59 THR 59 119 119 THR THR A . n A 1 60 VAL 60 120 120 VAL VAL A . n A 1 61 PHE 61 121 121 PHE PHE A . n A 1 62 ALA 62 122 122 ALA ALA A . n A 1 63 ILE 63 123 123 ILE ILE A . n A 1 64 LYS 64 124 124 LYS LYS A . n A 1 65 LYS 65 125 125 LYS LYS A . n A 1 66 TYR 66 126 126 TYR TYR A . n A 1 67 VAL 67 127 127 VAL VAL A . n A 1 68 ALA 68 128 128 ALA ALA A . n A 1 69 PHE 69 129 129 PHE PHE A . n A 1 70 LEU 70 130 130 LEU LEU A . n A 1 71 LYS 71 131 131 LYS LYS A . n A 1 72 LEU 72 132 132 LEU LEU A . n A 1 73 PHE 73 133 133 PHE PHE A . n A 1 74 LEU 74 134 134 LEU LEU A . n A 1 75 GLU 75 135 135 GLU GLU A . n A 1 76 THR 76 136 136 THR THR A . n A 1 77 ALA 77 137 137 ALA ALA A . n A 1 78 GLU 78 138 138 GLU GLU A . n A 1 79 LYS 79 139 139 LYS LYS A . n A 1 80 HIS 80 140 140 HIS HIS A . n A 1 81 PHE 81 141 141 PHE PHE A . n A 1 82 MET 82 142 142 MET MET A . n A 1 83 VAL 83 143 143 VAL VAL A . n A 1 84 GLY 84 144 144 GLY GLY A . n A 1 85 HIS 85 145 145 HIS HIS A . n A 1 86 ARG 86 146 146 ARG ARG A . n A 1 87 VAL 87 147 147 VAL VAL A . n A 1 88 HIS 88 148 148 HIS HIS A . n A 1 89 TYR 89 149 149 TYR TYR A . n A 1 90 TYR 90 150 150 TYR TYR A . n A 1 91 VAL 91 151 151 VAL VAL A . n A 1 92 PHE 92 152 152 PHE PHE A . n A 1 93 THR 93 153 153 THR THR A . n A 1 94 ASP 94 154 154 ASP ASP A . n A 1 95 GLN 95 155 155 GLN GLN A . n A 1 96 PRO 96 156 156 PRO PRO A . n A 1 97 ALA 97 157 157 ALA ALA A . n A 1 98 ALA 98 158 158 ALA ALA A . n A 1 99 VAL 99 159 159 VAL VAL A . n A 1 100 PRO 100 160 160 PRO PRO A . n A 1 101 ARG 101 161 161 ARG ARG A . n A 1 102 VAL 102 162 162 VAL VAL A . n A 1 103 THR 103 163 163 THR THR A . n A 1 104 LEU 104 164 164 LEU LEU A . n A 1 105 GLY 105 165 165 GLY GLY A . n A 1 106 THR 106 166 166 THR THR A . n A 1 107 GLY 107 167 167 GLY GLY A . n A 1 108 ARG 108 168 168 ARG ARG A . n A 1 109 GLN 109 169 169 GLN GLN A . n A 1 110 LEU 110 170 170 LEU LEU A . n A 1 111 SER 111 171 171 SER SER A . n A 1 112 VAL 112 172 172 VAL VAL A . n A 1 113 LEU 113 173 173 LEU LEU A . n A 1 114 GLU 114 174 174 GLU GLU A . n A 1 115 VAL 115 175 175 VAL VAL A . n A 1 116 ARG 116 176 ? ? ? A . n A 1 117 ALA 117 177 ? ? ? A . n A 1 118 TYR 118 178 ? ? ? A . n A 1 119 LYS 119 179 ? ? ? A . n A 1 120 ARG 120 180 ? ? ? A . n A 1 121 TRP 121 181 ? ? ? A . n A 1 122 GLN 122 182 ? ? ? A . n A 1 123 ASP 123 183 ? ? ? A . n A 1 124 VAL 124 184 ? ? ? A . n A 1 125 SER 125 185 ? ? ? A . n A 1 126 MET 126 186 ? ? ? A . n A 1 127 ARG 127 187 ? ? ? A . n A 1 128 ARG 128 188 ? ? ? A . n A 1 129 MET 129 189 ? ? ? A . n A 1 130 GLU 130 190 ? ? ? A . n A 1 131 MET 131 191 ? ? ? A . n A 1 132 ILE 132 192 ? ? ? A . n A 1 133 SER 133 193 ? ? ? A . n A 1 134 ASP 134 194 ? ? ? A . n A 1 135 PHE 135 195 ? ? ? A . n A 1 136 CYS 136 196 ? ? ? A . n A 1 137 GLU 137 197 197 GLU GLU A . n A 1 138 ARG 138 198 198 ARG ARG A . n A 1 139 ARG 139 199 199 ARG ARG A . n A 1 140 PHE 140 200 200 PHE PHE A . n A 1 141 LEU 141 201 201 LEU LEU A . n A 1 142 SER 142 202 202 SER SER A . n A 1 143 GLU 143 203 203 GLU GLU A . n A 1 144 VAL 144 204 204 VAL VAL A . n A 1 145 ASP 145 205 205 ASP ASP A . n A 1 146 TYR 146 206 206 TYR TYR A . n A 1 147 LEU 147 207 207 LEU LEU A . n A 1 148 VAL 148 208 208 VAL VAL A . n A 1 149 CYS 149 209 209 CYS CYS A . n A 1 150 VAL 150 210 210 VAL VAL A . n A 1 151 ASP 151 211 211 ASP ASP A . n A 1 152 VAL 152 212 212 VAL VAL A . n A 1 153 ASP 153 213 213 ASP ASP A . n A 1 154 MET 154 214 214 MET MET A . n A 1 155 GLU 155 215 215 GLU GLU A . n A 1 156 PHE 156 216 216 PHE PHE A . n A 1 157 ARG 157 217 217 ARG ARG A . n A 1 158 ASP 158 218 218 ASP ASP A . n A 1 159 HIS 159 219 219 HIS HIS A . n A 1 160 VAL 160 220 220 VAL VAL A . n A 1 161 GLY 161 221 221 GLY GLY A . n A 1 162 VAL 162 222 222 VAL VAL A . n A 1 163 GLU 163 223 223 GLU GLU A . n A 1 164 ILE 164 224 224 ILE ILE A . n A 1 165 LEU 165 225 225 LEU LEU A . n A 1 166 THR 166 226 226 THR THR A . n A 1 167 PRO 167 227 227 PRO PRO A . n A 1 168 LEU 168 228 228 LEU LEU A . n A 1 169 PHE 169 229 229 PHE PHE A . n A 1 170 GLY 170 230 230 GLY GLY A . n A 1 171 THR 171 231 231 THR THR A . n A 1 172 LEU 172 232 232 LEU LEU A . n A 1 173 HIS 173 233 233 HIS HIS A . n A 1 174 PRO 174 234 234 PRO PRO A . n A 1 175 GLY 175 235 235 GLY GLY A . n A 1 176 PHE 176 236 236 PHE PHE A . n A 1 177 TYR 177 237 237 TYR TYR A . n A 1 178 GLY 178 238 238 GLY GLY A . n A 1 179 SER 179 239 239 SER SER A . n A 1 180 SER 180 240 240 SER SER A . n A 1 181 ARG 181 241 241 ARG ARG A . n A 1 182 GLU 182 242 242 GLU GLU A . n A 1 183 ALA 183 243 243 ALA ALA A . n A 1 184 PHE 184 244 244 PHE PHE A . n A 1 185 THR 185 245 245 THR THR A . n A 1 186 TYR 186 246 246 TYR TYR A . n A 1 187 GLU 187 247 247 GLU GLU A . n A 1 188 ARG 188 248 248 ARG ARG A . n A 1 189 ARG 189 249 249 ARG ARG A . n A 1 190 PRO 190 250 250 PRO PRO A . n A 1 191 GLN 191 251 251 GLN GLN A . n A 1 192 SER 192 252 252 SER SER A . n A 1 193 GLN 193 253 253 GLN GLN A . n A 1 194 ALA 194 254 254 ALA ALA A . n A 1 195 TYR 195 255 255 TYR TYR A . n A 1 196 ILE 196 256 256 ILE ILE A . n A 1 197 PRO 197 257 257 PRO PRO A . n A 1 198 LYS 198 258 258 LYS LYS A . n A 1 199 ASP 199 259 259 ASP ASP A . n A 1 200 GLU 200 260 260 GLU GLU A . n A 1 201 GLY 201 261 261 GLY GLY A . n A 1 202 ASP 202 262 262 ASP ASP A . n A 1 203 PHE 203 263 263 PHE PHE A . n A 1 204 TYR 204 264 264 TYR TYR A . n A 1 205 TYR 205 265 265 TYR TYR A . n A 1 206 LEU 206 266 266 LEU LEU A . n A 1 207 GLY 207 267 267 GLY GLY A . n A 1 208 GLY 208 268 268 GLY GLY A . n A 1 209 PHE 209 269 269 PHE PHE A . n A 1 210 PHE 210 270 270 PHE PHE A . n A 1 211 GLY 211 271 271 GLY GLY A . n A 1 212 GLY 212 272 272 GLY GLY A . n A 1 213 SER 213 273 273 SER SER A . n A 1 214 VAL 214 274 274 VAL VAL A . n A 1 215 GLN 215 275 275 GLN GLN A . n A 1 216 GLU 216 276 276 GLU GLU A . n A 1 217 VAL 217 277 277 VAL VAL A . n A 1 218 GLN 218 278 278 GLN GLN A . n A 1 219 ARG 219 279 279 ARG ARG A . n A 1 220 LEU 220 280 280 LEU LEU A . n A 1 221 THR 221 281 281 THR THR A . n A 1 222 ARG 222 282 282 ARG ARG A . n A 1 223 ALA 223 283 283 ALA ALA A . n A 1 224 CYS 224 284 284 CYS CYS A . n A 1 225 HIS 225 285 285 HIS HIS A . n A 1 226 GLN 226 286 286 GLN GLN A . n A 1 227 ALA 227 287 287 ALA ALA A . n A 1 228 MET 228 288 288 MET MET A . n A 1 229 MET 229 289 289 MET MET A . n A 1 230 VAL 230 290 290 VAL VAL A . n A 1 231 ASP 231 291 291 ASP ASP A . n A 1 232 GLN 232 292 292 GLN GLN A . n A 1 233 ALA 233 293 293 ALA ALA A . n A 1 234 ASN 234 294 294 ASN ASN A . n A 1 235 GLY 235 295 295 GLY GLY A . n A 1 236 ILE 236 296 296 ILE ILE A . n A 1 237 GLU 237 297 297 GLU GLU A . n A 1 238 ALA 238 298 298 ALA ALA A . n A 1 239 VAL 239 299 299 VAL VAL A . n A 1 240 TRP 240 300 300 TRP TRP A . n A 1 241 HIS 241 301 301 HIS HIS A . n A 1 242 ASP 242 302 302 ASP ASP A . n A 1 243 GLU 243 303 303 GLU GLU A . n A 1 244 SER 244 304 304 SER SER A . n A 1 245 HIS 245 305 305 HIS HIS A . n A 1 246 LEU 246 306 306 LEU LEU A . n A 1 247 ASN 247 307 307 ASN ASN A . n A 1 248 LYS 248 308 308 LYS LYS A . n A 1 249 TYR 249 309 309 TYR TYR A . n A 1 250 LEU 250 310 310 LEU LEU A . n A 1 251 LEU 251 311 311 LEU LEU A . n A 1 252 ARG 252 312 312 ARG ARG A . n A 1 253 HIS 253 313 313 HIS HIS A . n A 1 254 LYS 254 314 314 LYS LYS A . n A 1 255 PRO 255 315 315 PRO PRO A . n A 1 256 THR 256 316 316 THR THR A . n A 1 257 LYS 257 317 317 LYS LYS A . n A 1 258 VAL 258 318 318 VAL VAL A . n A 1 259 LEU 259 319 319 LEU LEU A . n A 1 260 SER 260 320 320 SER SER A . n A 1 261 PRO 261 321 321 PRO PRO A . n A 1 262 GLU 262 322 322 GLU GLU A . n A 1 263 TYR 263 323 323 TYR TYR A . n A 1 264 LEU 264 324 324 LEU LEU A . n A 1 265 TRP 265 325 325 TRP TRP A . n A 1 266 ASP 266 326 326 ASP ASP A . n A 1 267 GLN 267 327 327 GLN GLN A . n A 1 268 GLN 268 328 328 GLN GLN A . n A 1 269 LEU 269 329 329 LEU LEU A . n A 1 270 LEU 270 330 330 LEU LEU A . n A 1 271 GLY 271 331 331 GLY GLY A . n A 1 272 TRP 272 332 332 TRP TRP A . n A 1 273 PRO 273 333 333 PRO PRO A . n A 1 274 ALA 274 334 334 ALA ALA A . n A 1 275 VAL 275 335 335 VAL VAL A . n A 1 276 LEU 276 336 336 LEU LEU A . n A 1 277 ARG 277 337 337 ARG ARG A . n A 1 278 LYS 278 338 338 LYS LYS A . n A 1 279 LEU 279 339 339 LEU LEU A . n A 1 280 ARG 280 340 340 ARG ARG A . n A 1 281 PHE 281 341 341 PHE PHE A . n A 1 282 THR 282 342 342 THR THR A . n A 1 283 ALA 283 343 343 ALA ALA A . n A 1 284 VAL 284 344 344 VAL VAL A . n A 1 285 PRO 285 345 345 PRO PRO A . n A 1 286 LYS 286 346 ? ? ? A . n A 1 287 ASN 287 347 ? ? ? A . n A 1 288 HIS 288 348 ? ? ? A . n A 1 289 GLN 289 349 ? ? ? A . n A 1 290 ALA 290 350 ? ? ? A . n A 1 291 VAL 291 351 ? ? ? A . n A 1 292 ARG 292 352 ? ? ? A . n A 1 293 ASN 293 353 ? ? ? A . n A 1 294 PRO 294 354 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HG 1 401 401 HG HG A . D 4 CL 1 402 402 CL CL A . E 3 HG 1 403 403 HG HG A . F 3 HG 1 404 404 HG HG A . G 3 HG 1 405 405 HG HG A . H 5 HOH 1 501 501 HOH TIP A . H 5 HOH 2 502 502 HOH TIP A . H 5 HOH 3 503 503 HOH TIP A . H 5 HOH 4 504 504 HOH TIP A . H 5 HOH 5 505 505 HOH TIP A . H 5 HOH 6 506 506 HOH TIP A . H 5 HOH 7 507 507 HOH TIP A . H 5 HOH 8 508 508 HOH TIP A . H 5 HOH 9 509 509 HOH TIP A . H 5 HOH 10 510 510 HOH TIP A . H 5 HOH 11 511 511 HOH TIP A . H 5 HOH 12 512 512 HOH TIP A . H 5 HOH 13 513 513 HOH TIP A . H 5 HOH 14 514 514 HOH TIP A . H 5 HOH 15 515 515 HOH TIP A . H 5 HOH 16 516 516 HOH TIP A . H 5 HOH 17 517 517 HOH TIP A . H 5 HOH 18 518 518 HOH TIP A . H 5 HOH 19 519 519 HOH TIP A . H 5 HOH 20 520 520 HOH TIP A . H 5 HOH 21 521 521 HOH TIP A . H 5 HOH 22 522 522 HOH TIP A . H 5 HOH 23 523 523 HOH TIP A . H 5 HOH 24 524 524 HOH TIP A . H 5 HOH 25 525 525 HOH TIP A . H 5 HOH 26 526 526 HOH TIP A . H 5 HOH 27 527 527 HOH TIP A . H 5 HOH 28 528 528 HOH TIP A . H 5 HOH 29 529 529 HOH TIP A . H 5 HOH 30 530 530 HOH TIP A . H 5 HOH 31 531 531 HOH TIP A . H 5 HOH 32 532 532 HOH TIP A . H 5 HOH 33 533 533 HOH TIP A . H 5 HOH 34 534 534 HOH TIP A . H 5 HOH 35 535 535 HOH TIP A . H 5 HOH 36 536 536 HOH TIP A . H 5 HOH 37 537 537 HOH TIP A . H 5 HOH 38 538 538 HOH TIP A . H 5 HOH 39 539 539 HOH TIP A . H 5 HOH 40 540 540 HOH TIP A . H 5 HOH 41 541 541 HOH TIP A . H 5 HOH 42 542 542 HOH TIP A . H 5 HOH 43 543 543 HOH TIP A . H 5 HOH 44 544 544 HOH TIP A . H 5 HOH 45 545 545 HOH TIP A . H 5 HOH 46 546 546 HOH TIP A . H 5 HOH 47 547 547 HOH TIP A . H 5 HOH 48 548 548 HOH TIP A . H 5 HOH 49 549 549 HOH TIP A . H 5 HOH 50 550 550 HOH TIP A . H 5 HOH 51 551 551 HOH TIP A . H 5 HOH 52 552 552 HOH TIP A . H 5 HOH 53 553 553 HOH TIP A . H 5 HOH 54 554 554 HOH TIP A . H 5 HOH 55 555 555 HOH TIP A . H 5 HOH 56 556 556 HOH TIP A . H 5 HOH 57 557 557 HOH TIP A . H 5 HOH 58 558 558 HOH TIP A . H 5 HOH 59 559 559 HOH TIP A . H 5 HOH 60 560 560 HOH TIP A . H 5 HOH 61 561 561 HOH TIP A . H 5 HOH 62 562 562 HOH TIP A . H 5 HOH 63 563 563 HOH TIP A . H 5 HOH 64 564 564 HOH TIP A . H 5 HOH 65 565 565 HOH TIP A . H 5 HOH 66 566 566 HOH TIP A . H 5 HOH 67 567 567 HOH TIP A . H 5 HOH 68 568 568 HOH TIP A . H 5 HOH 69 569 569 HOH TIP A . H 5 HOH 70 570 570 HOH TIP A . H 5 HOH 71 571 571 HOH TIP A . H 5 HOH 72 572 572 HOH TIP A . H 5 HOH 73 573 573 HOH TIP A . H 5 HOH 74 574 574 HOH TIP A . H 5 HOH 75 575 575 HOH TIP A . H 5 HOH 76 576 576 HOH TIP A . H 5 HOH 77 577 577 HOH TIP A . H 5 HOH 78 578 578 HOH TIP A . H 5 HOH 79 579 579 HOH TIP A . H 5 HOH 80 580 580 HOH TIP A . H 5 HOH 81 581 581 HOH TIP A . H 5 HOH 82 582 582 HOH TIP A . H 5 HOH 83 583 583 HOH TIP A . H 5 HOH 84 584 584 HOH TIP A . H 5 HOH 85 585 585 HOH TIP A . H 5 HOH 86 586 586 HOH TIP A . H 5 HOH 87 587 587 HOH TIP A . H 5 HOH 88 588 588 HOH TIP A . H 5 HOH 89 589 589 HOH TIP A . H 5 HOH 90 590 590 HOH TIP A . H 5 HOH 91 591 591 HOH TIP A . H 5 HOH 92 592 592 HOH TIP A . H 5 HOH 93 593 593 HOH TIP A . H 5 HOH 94 594 594 HOH TIP A . H 5 HOH 95 595 595 HOH TIP A . H 5 HOH 96 596 596 HOH TIP A . H 5 HOH 97 597 597 HOH TIP A . H 5 HOH 98 598 598 HOH TIP A . H 5 HOH 99 599 599 HOH TIP A . H 5 HOH 100 600 600 HOH TIP A . H 5 HOH 101 601 601 HOH TIP A . H 5 HOH 102 602 602 HOH TIP A . H 5 HOH 103 603 603 HOH TIP A . H 5 HOH 104 604 604 HOH TIP A . H 5 HOH 105 605 605 HOH TIP A . H 5 HOH 106 606 606 HOH TIP A . H 5 HOH 107 607 607 HOH TIP A . H 5 HOH 108 608 608 HOH TIP A . H 5 HOH 109 609 609 HOH TIP A . H 5 HOH 110 610 610 HOH TIP A . H 5 HOH 111 611 611 HOH TIP A . H 5 HOH 112 612 612 HOH TIP A . H 5 HOH 113 613 613 HOH TIP A . H 5 HOH 114 614 614 HOH TIP A . H 5 HOH 115 615 615 HOH TIP A . H 5 HOH 116 616 616 HOH TIP A . H 5 HOH 117 617 617 HOH TIP A . H 5 HOH 118 618 618 HOH TIP A . H 5 HOH 119 619 619 HOH TIP A . H 5 HOH 120 620 620 HOH TIP A . H 5 HOH 121 621 621 HOH TIP A . H 5 HOH 122 622 622 HOH TIP A . H 5 HOH 123 623 623 HOH TIP A . H 5 HOH 124 624 624 HOH TIP A . H 5 HOH 125 625 625 HOH TIP A . H 5 HOH 126 626 626 HOH TIP A . H 5 HOH 127 627 627 HOH TIP A . H 5 HOH 128 628 628 HOH TIP A . H 5 HOH 129 629 629 HOH TIP A . H 5 HOH 130 630 630 HOH TIP A . H 5 HOH 131 631 631 HOH TIP A . H 5 HOH 132 632 632 HOH TIP A . H 5 HOH 133 633 633 HOH TIP A . H 5 HOH 134 634 634 HOH TIP A . H 5 HOH 135 635 635 HOH TIP A . H 5 HOH 136 636 636 HOH TIP A . H 5 HOH 137 637 637 HOH TIP A . H 5 HOH 138 638 638 HOH TIP A . H 5 HOH 139 639 639 HOH TIP A . H 5 HOH 140 640 640 HOH TIP A . H 5 HOH 141 641 641 HOH TIP A . H 5 HOH 142 642 642 HOH TIP A . H 5 HOH 143 643 643 HOH TIP A . H 5 HOH 144 645 645 HOH TIP A . H 5 HOH 145 646 646 HOH TIP A . H 5 HOH 146 647 647 HOH TIP A . H 5 HOH 147 648 648 HOH TIP A . H 5 HOH 148 649 649 HOH TIP A . H 5 HOH 149 650 650 HOH TIP A . H 5 HOH 150 651 651 HOH TIP A . H 5 HOH 151 652 652 HOH TIP A . H 5 HOH 152 653 653 HOH TIP A . H 5 HOH 153 654 654 HOH TIP A . H 5 HOH 154 655 655 HOH TIP A . # _pdbx_molecule_features.prd_id PRD_900036 _pdbx_molecule_features.name 'H type 2 antigen, beta anomer' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Antigen _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900036 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H 2 1,2 A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 8020 ? 2 MORE -275 ? 2 'SSA (A^2)' 22570 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 52.4000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 39.6000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 20 ? A CYS 80 ? 1_555 HG ? F HG . ? A HG 404 ? 1_555 O ? A GLY 38 ? A GLY 98 ? 1_555 106.7 ? 2 SG ? A CYS 20 ? A CYS 80 ? 1_555 HG ? F HG . ? A HG 404 ? 1_555 O ? H HOH . ? A HOH 564 ? 1_555 52.6 ? 3 O ? A GLY 38 ? A GLY 98 ? 1_555 HG ? F HG . ? A HG 404 ? 1_555 O ? H HOH . ? A HOH 564 ? 1_555 89.8 ? 4 OG1 ? A THR 59 ? A THR 119 ? 1_555 HG ? E HG . ? A HG 403 ? 1_555 SG ? A CYS 149 ? A CYS 209 ? 1_555 90.6 ? 5 OG1 ? A THR 59 ? A THR 119 ? 1_555 HG ? E HG . ? A HG 403 ? 1_555 O ? H HOH . ? A HOH 634 ? 1_555 92.4 ? 6 SG ? A CYS 149 ? A CYS 209 ? 1_555 HG ? E HG . ? A HG 403 ? 1_555 O ? H HOH . ? A HOH 634 ? 1_555 174.5 ? 7 SG ? A CYS 224 ? A CYS 284 ? 1_555 HG ? G HG . ? A HG 405 ? 1_555 O ? A HIS 245 ? A HIS 305 ? 1_555 85.4 ? 8 SG ? A CYS 224 ? A CYS 284 ? 1_555 HG ? G HG . ? A HG 405 ? 1_555 O ? H HOH . ? A HOH 625 ? 1_555 128.5 ? 9 O ? A HIS 245 ? A HIS 305 ? 1_555 HG ? G HG . ? A HG 405 ? 1_555 O ? H HOH . ? A HOH 625 ? 1_555 72.0 ? 10 SG ? A CYS 224 ? A CYS 284 ? 1_555 HG ? G HG . ? A HG 405 ? 1_555 O ? H HOH . ? A HOH 626 ? 1_555 165.7 ? 11 O ? A HIS 245 ? A HIS 305 ? 1_555 HG ? G HG . ? A HG 405 ? 1_555 O ? H HOH . ? A HOH 626 ? 1_555 102.6 ? 12 O ? H HOH . ? A HOH 625 ? 1_555 HG ? G HG . ? A HG 405 ? 1_555 O ? H HOH . ? A HOH 626 ? 1_555 65.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-12-13 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-08-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Non-polymer description' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' 12 5 'Structure model' 'Refinement description' 13 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_molecule_features 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_conn_angle 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_conn_type 18 4 'Structure model' struct_ref_seq_dif 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' chem_comp_atom 23 5 'Structure model' chem_comp_bond 24 5 'Structure model' database_2 25 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.occupancy' 14 4 'Structure model' '_atom_site.type_symbol' 15 4 'Structure model' '_chem_comp.formula' 16 4 'Structure model' '_chem_comp.formula_weight' 17 4 'Structure model' '_chem_comp.id' 18 4 'Structure model' '_chem_comp.mon_nstd_flag' 19 4 'Structure model' '_chem_comp.name' 20 4 'Structure model' '_chem_comp.pdbx_synonyms' 21 4 'Structure model' '_chem_comp.type' 22 4 'Structure model' '_entity.formula_weight' 23 4 'Structure model' '_entity.pdbx_description' 24 4 'Structure model' '_entity.pdbx_number_of_molecules' 25 4 'Structure model' '_entity.src_method' 26 4 'Structure model' '_entity.type' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 35 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 36 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 37 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 38 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 39 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 40 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 41 4 'Structure model' '_pdbx_struct_conn_angle.value' 42 4 'Structure model' '_struct_asym.entity_id' 43 4 'Structure model' '_struct_ref_seq_dif.details' 44 5 'Structure model' '_chem_comp.pdbx_synonyms' 45 5 'Structure model' '_database_2.pdbx_DOI' 46 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CrystalClear 'data reduction' '(MSC/RIGAKU)' ? 2 CNS refinement . ? 3 CrystalClear 'data scaling' '(MSC/RIGAKU)' ? 4 CNS phasing . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 652 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 652 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_656 _pdbx_validate_symm_contact.dist 1.46 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 124 ? ? 50.07 -125.67 2 1 HIS A 301 ? ? 41.48 -121.52 3 1 LEU A 324 ? ? -163.76 95.28 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 176 ? A ARG 116 2 1 Y 1 A ALA 177 ? A ALA 117 3 1 Y 1 A TYR 178 ? A TYR 118 4 1 Y 1 A LYS 179 ? A LYS 119 5 1 Y 1 A ARG 180 ? A ARG 120 6 1 Y 1 A TRP 181 ? A TRP 121 7 1 Y 1 A GLN 182 ? A GLN 122 8 1 Y 1 A ASP 183 ? A ASP 123 9 1 Y 1 A VAL 184 ? A VAL 124 10 1 Y 1 A SER 185 ? A SER 125 11 1 Y 1 A MET 186 ? A MET 126 12 1 Y 1 A ARG 187 ? A ARG 127 13 1 Y 1 A ARG 188 ? A ARG 128 14 1 Y 1 A MET 189 ? A MET 129 15 1 Y 1 A GLU 190 ? A GLU 130 16 1 Y 1 A MET 191 ? A MET 131 17 1 Y 1 A ILE 192 ? A ILE 132 18 1 Y 1 A SER 193 ? A SER 133 19 1 Y 1 A ASP 194 ? A ASP 134 20 1 Y 1 A PHE 195 ? A PHE 135 21 1 Y 1 A CYS 196 ? A CYS 136 22 1 Y 1 A LYS 346 ? A LYS 286 23 1 Y 1 A ASN 347 ? A ASN 287 24 1 Y 1 A HIS 348 ? A HIS 288 25 1 Y 1 A GLN 349 ? A GLN 289 26 1 Y 1 A ALA 350 ? A ALA 290 27 1 Y 1 A VAL 351 ? A VAL 291 28 1 Y 1 A ARG 352 ? A ARG 292 29 1 Y 1 A ASN 353 ? A ASN 293 30 1 Y 1 A PRO 354 ? A PRO 294 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 FUC C1 C N R 89 FUC C2 C N S 90 FUC C3 C N R 91 FUC C4 C N S 92 FUC C5 C N S 93 FUC C6 C N N 94 FUC O1 O N N 95 FUC O2 O N N 96 FUC O3 O N N 97 FUC O4 O N N 98 FUC O5 O N N 99 FUC H1 H N N 100 FUC H2 H N N 101 FUC H3 H N N 102 FUC H4 H N N 103 FUC H5 H N N 104 FUC H61 H N N 105 FUC H62 H N N 106 FUC H63 H N N 107 FUC HO1 H N N 108 FUC HO2 H N N 109 FUC HO3 H N N 110 FUC HO4 H N N 111 GAL C1 C N R 112 GAL C2 C N R 113 GAL C3 C N S 114 GAL C4 C N R 115 GAL C5 C N R 116 GAL C6 C N N 117 GAL O1 O N N 118 GAL O2 O N N 119 GAL O3 O N N 120 GAL O4 O N N 121 GAL O5 O N N 122 GAL O6 O N N 123 GAL H1 H N N 124 GAL H2 H N N 125 GAL H3 H N N 126 GAL H4 H N N 127 GAL H5 H N N 128 GAL H61 H N N 129 GAL H62 H N N 130 GAL HO1 H N N 131 GAL HO2 H N N 132 GAL HO3 H N N 133 GAL HO4 H N N 134 GAL HO6 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HG HG HG N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 NAG C1 C N R 299 NAG C2 C N R 300 NAG C3 C N R 301 NAG C4 C N S 302 NAG C5 C N R 303 NAG C6 C N N 304 NAG C7 C N N 305 NAG C8 C N N 306 NAG N2 N N N 307 NAG O1 O N N 308 NAG O3 O N N 309 NAG O4 O N N 310 NAG O5 O N N 311 NAG O6 O N N 312 NAG O7 O N N 313 NAG H1 H N N 314 NAG H2 H N N 315 NAG H3 H N N 316 NAG H4 H N N 317 NAG H5 H N N 318 NAG H61 H N N 319 NAG H62 H N N 320 NAG H81 H N N 321 NAG H82 H N N 322 NAG H83 H N N 323 NAG HN2 H N N 324 NAG HO1 H N N 325 NAG HO3 H N N 326 NAG HO4 H N N 327 NAG HO6 H N N 328 PHE N N N N 329 PHE CA C N S 330 PHE C C N N 331 PHE O O N N 332 PHE CB C N N 333 PHE CG C Y N 334 PHE CD1 C Y N 335 PHE CD2 C Y N 336 PHE CE1 C Y N 337 PHE CE2 C Y N 338 PHE CZ C Y N 339 PHE OXT O N N 340 PHE H H N N 341 PHE H2 H N N 342 PHE HA H N N 343 PHE HB2 H N N 344 PHE HB3 H N N 345 PHE HD1 H N N 346 PHE HD2 H N N 347 PHE HE1 H N N 348 PHE HE2 H N N 349 PHE HZ H N N 350 PHE HXT H N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GAL C1 C2 sing N N 106 GAL C1 O1 sing N N 107 GAL C1 O5 sing N N 108 GAL C1 H1 sing N N 109 GAL C2 C3 sing N N 110 GAL C2 O2 sing N N 111 GAL C2 H2 sing N N 112 GAL C3 C4 sing N N 113 GAL C3 O3 sing N N 114 GAL C3 H3 sing N N 115 GAL C4 C5 sing N N 116 GAL C4 O4 sing N N 117 GAL C4 H4 sing N N 118 GAL C5 C6 sing N N 119 GAL C5 O5 sing N N 120 GAL C5 H5 sing N N 121 GAL C6 O6 sing N N 122 GAL C6 H61 sing N N 123 GAL C6 H62 sing N N 124 GAL O1 HO1 sing N N 125 GAL O2 HO2 sing N N 126 GAL O3 HO3 sing N N 127 GAL O4 HO4 sing N N 128 GAL O6 HO6 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MET N CA sing N N 265 MET N H sing N N 266 MET N H2 sing N N 267 MET CA C sing N N 268 MET CA CB sing N N 269 MET CA HA sing N N 270 MET C O doub N N 271 MET C OXT sing N N 272 MET CB CG sing N N 273 MET CB HB2 sing N N 274 MET CB HB3 sing N N 275 MET CG SD sing N N 276 MET CG HG2 sing N N 277 MET CG HG3 sing N N 278 MET SD CE sing N N 279 MET CE HE1 sing N N 280 MET CE HE2 sing N N 281 MET CE HE3 sing N N 282 MET OXT HXT sing N N 283 NAG C1 C2 sing N N 284 NAG C1 O1 sing N N 285 NAG C1 O5 sing N N 286 NAG C1 H1 sing N N 287 NAG C2 C3 sing N N 288 NAG C2 N2 sing N N 289 NAG C2 H2 sing N N 290 NAG C3 C4 sing N N 291 NAG C3 O3 sing N N 292 NAG C3 H3 sing N N 293 NAG C4 C5 sing N N 294 NAG C4 O4 sing N N 295 NAG C4 H4 sing N N 296 NAG C5 C6 sing N N 297 NAG C5 O5 sing N N 298 NAG C5 H5 sing N N 299 NAG C6 O6 sing N N 300 NAG C6 H61 sing N N 301 NAG C6 H62 sing N N 302 NAG C7 C8 sing N N 303 NAG C7 N2 sing N N 304 NAG C7 O7 doub N N 305 NAG C8 H81 sing N N 306 NAG C8 H82 sing N N 307 NAG C8 H83 sing N N 308 NAG N2 HN2 sing N N 309 NAG O1 HO1 sing N N 310 NAG O3 HO3 sing N N 311 NAG O4 HO4 sing N N 312 NAG O6 HO6 sing N N 313 PHE N CA sing N N 314 PHE N H sing N N 315 PHE N H2 sing N N 316 PHE CA C sing N N 317 PHE CA CB sing N N 318 PHE CA HA sing N N 319 PHE C O doub N N 320 PHE C OXT sing N N 321 PHE CB CG sing N N 322 PHE CB HB2 sing N N 323 PHE CB HB3 sing N N 324 PHE CG CD1 doub Y N 325 PHE CG CD2 sing Y N 326 PHE CD1 CE1 sing Y N 327 PHE CD1 HD1 sing N N 328 PHE CD2 CE2 doub Y N 329 PHE CD2 HD2 sing N N 330 PHE CE1 CZ doub Y N 331 PHE CE1 HE1 sing N N 332 PHE CE2 CZ sing Y N 333 PHE CE2 HE2 sing N N 334 PHE CZ HZ sing N N 335 PHE OXT HXT sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 VAL N CA sing N N 435 VAL N H sing N N 436 VAL N H2 sing N N 437 VAL CA C sing N N 438 VAL CA CB sing N N 439 VAL CA HA sing N N 440 VAL C O doub N N 441 VAL C OXT sing N N 442 VAL CB CG1 sing N N 443 VAL CB CG2 sing N N 444 VAL CB HB sing N N 445 VAL CG1 HG11 sing N N 446 VAL CG1 HG12 sing N N 447 VAL CG1 HG13 sing N N 448 VAL CG2 HG21 sing N N 449 VAL CG2 HG22 sing N N 450 VAL CG2 HG23 sing N N 451 VAL OXT HXT sing N N 452 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 ? DRG 1 n B 2 GAL 2 B GAL 2 ? DRG 1 n B 2 FUC 3 B FUC 3 ? DRG 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 LFucpa1-2DGalpb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,3,2/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3/a4-b1_b2-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GAL C1 O1 1 NAG O4 HO4 sing ? 2 2 3 FUC C1 O1 2 GAL O2 HO2 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 GAL 2 n 2 FUC 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MERCURY (II) ION' HG 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1LZ0 _pdbx_initial_refinement_model.details ? #