HEADER HYDROLASE 03-MAY-05 1ZKJ TITLE STRUCTURAL BASIS FOR THE EXTENDED SUBSTRATE SPECTRUM OF CMY-10, A TITLE 2 PLASMID-ENCODED CLASS C BETA-LACTAMASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTENDED-SPECTRUM BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CMY-10; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTER AEROGENES; SOURCE 3 ORGANISM_TAXID: 548; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EXTENDED SPECTRUM BETA-LACTAMASE, CMY-10, PLASMID, CLASS C, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.S.CHA,H.I.JUNG,Y.J.AN,S.H.LEE REVDAT 4 13-MAR-24 1ZKJ 1 REMARK LINK REVDAT 3 24-FEB-09 1ZKJ 1 VERSN REVDAT 2 23-MAY-06 1ZKJ 1 JRNL REVDAT 1 18-APR-06 1ZKJ 0 JRNL AUTH J.Y.KIM,H.I.JUNG,Y.J.AN,J.H.LEE,S.J.KIM,S.H.JEONG,K.J.LEE, JRNL AUTH 2 P.G.SUH,H.S.LEE,S.H.LEE,S.S.CHA JRNL TITL STRUCTURAL BASIS FOR THE EXTENDED SUBSTRATE SPECTRUM OF JRNL TITL 2 CMY-10, A PLASMID-ENCODED CLASS C BETA-LACTAMASE. JRNL REF MOL.MICROBIOL. V. 60 907 2006 JRNL REFN ISSN 0950-382X JRNL PMID 16677302 JRNL DOI 10.1111/J.1365-2958.2006.05146.X REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1170233.790 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 23088 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2379 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3676 REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2627 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 384 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 1.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.07 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.05 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.830 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.44 REMARK 3 BSOL : 49.94 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ACET.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ACET.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000032823. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 6B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12714 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PROTEUM 300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 267900 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 22.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, ZINC ACETATE, CACODYLATE, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.64800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLU A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 PRO A 5 REMARK 465 VAL A 6 REMARK 465 SER A 304 REMARK 465 GLY A 305 REMARK 465 SER A 306 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 GLN A 250 CG CD OE1 NE2 REMARK 470 GLU A 303 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 221 CD GLU A 221 OE2 0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 178 -62.32 -125.15 REMARK 500 TYR A 223 23.98 -160.52 REMARK 500 ASN A 338 48.12 -100.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 506 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD2 REMARK 620 2 HIS A 40 ND1 107.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 514 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 14 OD2 REMARK 620 2 HOH A1683 O 93.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 507 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 148 NE2 REMARK 620 2 HOH A1566 O 88.8 REMARK 620 3 HOH A1571 O 101.0 156.3 REMARK 620 4 HOH A1699 O 137.6 68.0 114.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 508 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 161 NE2 REMARK 620 2 ACY A1403 O 108.5 REMARK 620 3 ACY A1403 OXT 85.6 52.6 REMARK 620 4 ACY A1404 O 114.9 94.4 146.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 509 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 187 NE2 REMARK 620 2 HOH A1493 O 68.3 REMARK 620 3 HOH A1641 O 119.9 145.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 510 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 191 ND2 REMARK 620 2 HOH A1444 O 90.7 REMARK 620 3 HOH A1446 O 96.0 87.7 REMARK 620 4 HOH A1474 O 178.0 90.3 82.3 REMARK 620 5 HOH A1476 O 89.4 176.8 89.1 89.6 REMARK 620 6 HOH A1595 O 89.7 94.1 174.1 92.0 89.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1402 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 1404 DBREF 1ZKJ A 1 359 UNP Q99QC1 Q99QC1_ENTAE 24 382 SEQRES 1 A 359 GLY GLU ALA SER PRO VAL ASP PRO LEU ARG PRO VAL VAL SEQRES 2 A 359 ASP ALA SER ILE GLN PRO LEU LEU LYS GLU HIS ARG ILE SEQRES 3 A 359 PRO GLY MET ALA VAL ALA VAL LEU LYS ASP GLY LYS ALA SEQRES 4 A 359 HIS TYR PHE ASN TYR GLY VAL ALA ASN ARG GLU SER GLY SEQRES 5 A 359 ALA GLY VAL SER GLU GLN THR LEU PHE GLU ILE GLY SER SEQRES 6 A 359 VAL SER LYS THR LEU THR ALA THR LEU GLY ALA TYR ALA SEQRES 7 A 359 VAL VAL LYS GLY ALA MET GLN LEU ASP ASP LYS ALA SER SEQRES 8 A 359 ARG HIS ALA PRO TRP LEU LYS GLY SER ALA PHE ASP SER SEQRES 9 A 359 ILE THR MET GLY GLU LEU ALA THR TYR SER ALA GLY GLY SEQRES 10 A 359 LEU PRO LEU GLN PHE PRO GLU GLU VAL ASP SER SER GLU SEQRES 11 A 359 LYS MET ARG ALA TYR TYR ARG GLN TRP ALA PRO VAL TYR SEQRES 12 A 359 SER PRO GLY SER HIS ARG GLN TYR SER ASN PRO SER ILE SEQRES 13 A 359 GLY LEU PHE GLY HIS LEU ALA ALA SER SER LEU LYS GLN SEQRES 14 A 359 PRO PHE ALA PRO LEU MET GLU GLN THR LEU LEU PRO GLY SEQRES 15 A 359 LEU GLY MET HIS HIS THR TYR VAL ASN VAL PRO LYS GLN SEQRES 16 A 359 ALA MET ALA SER TYR ALA TYR GLY TYR SER LYS GLU ASP SEQRES 17 A 359 LYS PRO ILE ARG VAL ASN PRO GLY MET LEU ALA ASP GLU SEQRES 18 A 359 ALA TYR GLY ILE LYS THR SER SER ALA ASP LEU LEU ARG SEQRES 19 A 359 PHE VAL LYS ALA ASN ILE GLY GLY VAL ASP ASP LYS ALA SEQRES 20 A 359 LEU GLN GLN ALA ILE SER LEU THR HIS GLN GLY HIS TYR SEQRES 21 A 359 SER VAL GLY GLY MET THR GLN GLY LEU GLY TRP GLU SER SEQRES 22 A 359 TYR ALA TYR PRO VAL THR GLU GLN THR LEU LEU ALA GLY SEQRES 23 A 359 ASN SER ALA LYS VAL ILE LEU GLU ALA ASN PRO THR ALA SEQRES 24 A 359 ALA PRO ARG GLU SER GLY SER GLN VAL LEU PHE ASN LYS SEQRES 25 A 359 THR GLY SER THR ASN GLY PHE GLY ALA TYR VAL ALA PHE SEQRES 26 A 359 VAL PRO ALA ARG GLY ILE GLY ILE VAL MET LEU ALA ASN SEQRES 27 A 359 ARG ASN TYR PRO ILE GLU ALA ARG ILE LYS ALA ALA HIS SEQRES 28 A 359 ALA ILE LEU ALA GLN LEU ALA GLY HET ZN A 506 1 HET ZN A 507 1 HET ZN A 508 1 HET ZN A 509 1 HET ZN A 510 1 HET ZN A 511 1 HET ZN A 512 1 HET ZN A 514 1 HET ACY A1401 4 HET ACY A1402 4 HET ACY A1403 4 HET ACY A1404 4 HETNAM ZN ZINC ION HETNAM ACY ACETIC ACID FORMUL 2 ZN 8(ZN 2+) FORMUL 10 ACY 4(C2 H4 O2) FORMUL 14 HOH *384(H2 O) HELIX 1 1 LEU A 9 HIS A 24 1 16 HELIX 2 2 VAL A 66 LYS A 81 1 16 HELIX 3 3 LYS A 89 LYS A 98 5 10 HELIX 4 4 SER A 100 SER A 104 5 5 HELIX 5 5 THR A 106 THR A 112 1 7 HELIX 6 6 SER A 128 TRP A 139 1 12 HELIX 7 7 SER A 152 LEU A 167 1 16 HELIX 8 8 PRO A 170 THR A 178 1 9 HELIX 9 9 THR A 178 LEU A 183 1 6 HELIX 10 10 PRO A 193 TYR A 200 5 8 HELIX 11 11 LEU A 218 GLY A 224 1 7 HELIX 12 12 SER A 228 ASN A 239 1 12 HELIX 13 13 ASP A 245 THR A 255 1 11 HELIX 14 14 THR A 279 ASN A 287 1 9 HELIX 15 15 SER A 288 GLU A 294 1 7 HELIX 16 16 PRO A 327 GLY A 330 5 4 HELIX 17 17 PRO A 342 GLY A 359 1 18 SHEET 1 A 8 LYS A 38 GLY A 45 0 SHEET 2 A 8 GLY A 28 LYS A 35 -1 N VAL A 31 O PHE A 42 SHEET 3 A 8 ILE A 331 ALA A 337 -1 O LEU A 336 N ALA A 30 SHEET 4 A 8 PHE A 319 VAL A 326 -1 N VAL A 326 O ILE A 331 SHEET 5 A 8 VAL A 308 THR A 316 -1 N GLY A 314 O ALA A 321 SHEET 6 A 8 GLU A 272 ALA A 275 -1 N TYR A 274 O LEU A 309 SHEET 7 A 8 MET A 265 GLN A 267 -1 N THR A 266 O SER A 273 SHEET 8 A 8 TYR A 260 VAL A 262 -1 N TYR A 260 O GLN A 267 SHEET 1 B 2 PHE A 61 GLU A 62 0 SHEET 2 B 2 LYS A 226 THR A 227 -1 O THR A 227 N PHE A 61 SHEET 1 C 2 HIS A 148 ARG A 149 0 SHEET 2 C 2 ASN A 296 PRO A 297 -1 O ASN A 296 N ARG A 149 SHEET 1 D 2 GLY A 203 TYR A 204 0 SHEET 2 D 2 PRO A 210 ILE A 211 -1 O ILE A 211 N GLY A 203 LINK OD2 ASP A 7 ZN ZN A 506 1555 1555 1.89 LINK OD2 ASP A 14 ZN ZN A 514 1555 1555 2.08 LINK ND1 HIS A 40 ZN ZN A 506 1555 1555 2.10 LINK NE2 HIS A 148 ZN ZN A 507 1555 1555 2.06 LINK NE2 HIS A 161 ZN ZN A 508 1555 1555 2.01 LINK NE2 HIS A 187 ZN ZN A 509 1555 1555 2.77 LINK ND2 ASN A 191 ZN ZN A 510 1555 1555 2.09 LINK ZN ZN A 507 O HOH A1566 1555 1555 2.17 LINK ZN ZN A 507 O HOH A1571 1555 1555 2.39 LINK ZN ZN A 507 O HOH A1699 1555 1555 2.59 LINK ZN ZN A 508 O ACY A1403 1555 1555 2.05 LINK ZN ZN A 508 OXT ACY A1403 1555 1555 2.76 LINK ZN ZN A 508 O ACY A1404 1555 1555 1.97 LINK ZN ZN A 509 O HOH A1493 1555 1555 2.60 LINK ZN ZN A 509 O HOH A1641 1555 1555 2.59 LINK ZN ZN A 510 O HOH A1444 1555 1555 2.13 LINK ZN ZN A 510 O HOH A1446 1555 1555 2.22 LINK ZN ZN A 510 O HOH A1474 1555 1555 2.04 LINK ZN ZN A 510 O HOH A1476 1555 1555 2.01 LINK ZN ZN A 510 O HOH A1595 1555 1555 2.05 LINK ZN ZN A 514 O HOH A1683 1555 1555 2.03 CISPEP 1 TYR A 276 PRO A 277 0 -0.25 SITE 1 AC1 2 ASP A 7 HIS A 40 SITE 1 AC2 4 HIS A 148 HOH A1566 HOH A1571 HOH A1699 SITE 1 AC3 3 HIS A 161 ACY A1403 ACY A1404 SITE 1 AC4 3 HIS A 187 HOH A1493 HOH A1641 SITE 1 AC5 6 ASN A 191 HOH A1444 HOH A1446 HOH A1474 SITE 2 AC5 6 HOH A1476 HOH A1595 SITE 1 AC6 1 GLY A 359 SITE 1 AC7 3 HIS A 24 TYR A 341 ACY A1401 SITE 1 AC8 4 ASP A 14 HOH A1640 HOH A1683 HOH A1684 SITE 1 AC9 4 GLU A 23 HIS A 24 ZN A 512 HOH A1551 SITE 1 BC1 5 VAL A 213 ASN A 214 THR A 316 ASN A 317 SITE 2 BC1 5 HOH A1470 SITE 1 BC2 7 HIS A 93 TRP A 96 HIS A 161 SER A 165 SITE 2 BC2 7 ZN A 508 ACY A1404 HOH A1455 SITE 1 BC3 6 SER A 129 MET A 132 ARG A 133 HIS A 161 SITE 2 BC3 6 ZN A 508 ACY A1403 CRYST1 49.703 59.296 63.856 90.00 103.08 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020120 0.000000 0.004675 0.00000 SCALE2 0.000000 0.016865 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016077 0.00000