HEADER HORMONE/GROWTH FACTOR 06-MAY-05 1ZLG TITLE SOLUTION STRUCTURE OF THE EXTRACELLULAR MATRIX PROTEIN ANOSMIN-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANOSMIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: KALLMANN SYNDROME PROTEIN, ADHESION MOLECULE-LIKE X-LINKED; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAL1, ADMLX, KAL, KALIG1; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SCHNEIDER 2 (S2) CELLS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT/BIP/V5-HIS KEYWDS INSULIN-LIKE GROWTH FACTOR RECEPTOR CYS-RICH FOLD, WHEY ACIDIC KEYWDS 2 PROTEIN FOLD, FIBRONECTIN TYPE III FOLD, HORMONE-GROWTH FACTOR KEYWDS 3 COMPLEX EXPDTA SOLUTION SCATTERING MDLTYP CA ATOMS ONLY, CHAIN A AUTHOR Y.HU,Z.SUN,J.T.EATON,P.M.BOULOUX,S.J.PERKINS REVDAT 6 22-MAY-24 1ZLG 1 REMARK REVDAT 5 21-DEC-22 1ZLG 1 SEQADV REVDAT 4 11-OCT-17 1ZLG 1 REMARK REVDAT 3 07-APR-10 1ZLG 1 REMARK REVDAT 2 24-FEB-09 1ZLG 1 VERSN REVDAT 1 09-MAY-06 1ZLG 0 JRNL AUTH Y.HU,Z.SUN,J.T.EATON,P.M.BOULOUX,S.J.PERKINS JRNL TITL EXTENDED AND FLEXIBLE DOMAIN SOLUTION STRUCTURE OF THE JRNL TITL 2 EXTRACELLULAR MATRIX PROTEIN ANOSMIN-1 BY X-RAY SCATTERING, JRNL TITL 3 ANALYTICAL ULTRACENTRIFUGATION AND CONSTRAINED MODELLING. JRNL REF J.MOL.BIOL. V. 350 553 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 15949815 JRNL DOI 10.1016/J.JMB.2005.04.031 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : INSIGHTII 98 REMARK 3 AUTHORS : REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 680 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000032856. REMARK 265 REMARK 265 EXPERIMENTAL DETAILS REMARK 265 REMARK 265 EXPERIMENT TYPE : SMALL ANGLE X-RAY SCATTERING REMARK 265 DATA ACQUISITION REMARK 265 RADIATION/NEUTRON SOURCE : ESRF BEAMLINE ID02 REMARK 265 SYNCHROTRON (Y/N) : Y REMARK 265 BEAMLINE TYPE : ID02 REMARK 265 BEAMLINE INSTRUMENT : NULL REMARK 265 DETECTOR TYPE : FRELON CCD CAMERA REMARK 265 DETECTOR MANUFACTURER DETAILS : NULL REMARK 265 TEMPERATURE (KELVIN) : 288 REMARK 265 PH : 7.4 REMARK 265 NUMBER OF TIME FRAMES USED : 1 REMARK 265 PROTEIN CONCENTRATION RANGE (MG/ML) : 0.2-0.4 REMARK 265 SAMPLE BUFFER : 12 MM NA PHOSPHATE, REMARK 265 220 MM NACL REMARK 265 DATA REDUCTION SOFTWARE : MULTICCD REMARK 265 GUINIER MEAN RADIUS OF GYRATION (NM) : 6.65 REMARK 265 SIGMA MEAN RADIUS OF GYRATION : 0.49 REMARK 265 R(XS-1) MEAN CROSS SECTIONAL RADII (NM) : 1.88 REMARK 265 R(XS-1) SIGMA MEAN CROSS SECTIONAL RADII : 0.77 REMARK 265 R(XS-2) MEAN CROSS SECTIONAL RADII (NM) : NULL REMARK 265 R(XS-2) SIGMA MEAN CROSS SECTIONAL RADII : NULL REMARK 265 P(R) PROTEIN LENGTH (NM) : 1 REMARK 265 REMARK 265 DATA ANALYSIS AND MODEL FITTING: REMARK 265 METHOD USED TO DETERMINE THE STRUCTURE: CONSTRAINED SCATTERING REMARK 265 FITTING OF HOMOLOGY MODELS REMARK 265 SOFTWARE USED : INSIGHT II, HOMOLOGY, DISCOVERY, BIOPOLYMER, REMARK 265 DELPHI, O, SCTPL7, GNOM REMARK 265 SOFTWARE AUTHORS : ACCELRYS REMARK 265 STARTING MODEL : NULL REMARK 265 REMARK 265 CONFORMERS, NUMBER CALCULATED : 10000 REMARK 265 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 265 CONFORMERS, SELECTION CRITERIA : THE MODELLED SCATTERING CURVES REMARK 265 WERE ASSESSED BY CALCULATION OF THE RG, RSX-1 AND VALUES IN THE REMARK 265 SAME Q RANGES USED IN THE EXPERIMENTAL GUINIER FITS. MODELS WERE REMARK 265 THEN RANKED USING A GOODNESS-OF-FIT R-FACTOR DEFINED BY ANALOGY REMARK 265 WITH PROTEIN CRYSTALLOGRAPHY REMARK 265 REMARK 265 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 265 REMARK 265 OTHER DETAILS: HOMOLOGY MODELS WERE BUILT FOR THE CYS-BOX, WAP REMARK 265 AND FOUR FNIII DOMAINS. THE POSITIONS OF THE DOMAINS WERE REMARK 265 DETERMINED BY AN APPROACH THAT COMBINED RANDOMISED LINKER REMARK 265 PEPTIDE STRUCTURES PRODUCED BY MOLECULAR DYNAMICS SIMULATIONS REMARK 265 WITH CURVE-FITTING TO EXPERIMENTAL X-RAY SOLUTION SCATTERING REMARK 265 DATA. A SINGLE ARRANGEMENT OF THE SIX DOMAINS IS PRESENTED, REMARK 265 WHICH IS REPRESENTATIVE OF A FAMILY OF STRUCTURES THAT FIT THE REMARK 265 SCATTERING DATA. MORE DETAILS ON THE MODELLING STRATEGY ARE REMARK 265 CONTAINED IN THE PRIMARY REFERENCE. THE ALGORITHM RESULTED IN REMARK 265 SEVERAL CLOSE APPROACHES BETWEEN ATOMS. THIS ENTRY CONTAINS FOUR REMARK 265 SUCH PAIRS ALA 292 - PRO 318 PRO 291 - GLU 319 PRO 27 - PHE 122 REMARK 265 TYR 225 - PHE 355 REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA ALA A 292 CA PRO A 318 0.40 REMARK 500 CA PRO A 291 CA GLU A 319 0.84 REMARK 500 CA PRO A 27 CA PHE A 122 0.87 REMARK 500 CA TYR A 225 CA PHE A 355 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1IGR RELATED DB: PDB REMARK 900 INSULIN-LIKE GROWTH FACTOR RECEPTOR REMARK 900 RELATED ID: 1FLE RELATED DB: PDB REMARK 900 ELAFIN REMARK 900 RELATED ID: 1FNA RELATED DB: PDB REMARK 900 TENTH FNIII DOMAIN OF FIBRONECTIN DBREF 1ZLG A 24 680 UNP P23352 KALM_HUMAN 24 680 SEQADV 1ZLG ARG A 48 UNP P23352 PRO 48 VARIANT SEQADV 1ZLG GLY A 681 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG LYS A 682 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG PRO A 683 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG ILE A 684 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG PRO A 685 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG ASN A 686 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG PRO A 687 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG LEU A 688 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG LEU A 689 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG GLY A 690 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG LEU A 691 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG ASP A 692 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG SER A 693 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG THR A 694 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG ARG A 695 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG THR A 696 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG GLY A 697 UNP P23352 CLONING ARTIFACT SEQADV 1ZLG HIS A 698 UNP P23352 EXPRESSION TAG SEQADV 1ZLG HIS A 699 UNP P23352 EXPRESSION TAG SEQADV 1ZLG HIS A 700 UNP P23352 EXPRESSION TAG SEQADV 1ZLG HIS A 701 UNP P23352 EXPRESSION TAG SEQADV 1ZLG HIS A 702 UNP P23352 EXPRESSION TAG SEQADV 1ZLG HIS A 703 UNP P23352 EXPRESSION TAG SEQRES 1 A 680 ALA ALA GLY PRO GLY ALA ALA ALA ALA ARG ARG LEU ASP SEQRES 2 A 680 GLU SER LEU SER ALA GLY SER VAL GLN ARG ALA ARG CYS SEQRES 3 A 680 ALA SER ARG CYS LEU SER LEU GLN ILE THR ARG ILE SER SEQRES 4 A 680 ALA PHE PHE GLN HIS PHE GLN ASN ASN GLY SER LEU VAL SEQRES 5 A 680 TRP CYS GLN ASN HIS LYS GLN CYS SER LYS CYS LEU GLU SEQRES 6 A 680 PRO CYS LYS GLU SER GLY ASP LEU ARG LYS HIS GLN CYS SEQRES 7 A 680 GLN SER PHE CYS GLU PRO LEU PHE PRO LYS LYS SER TYR SEQRES 8 A 680 GLU CYS LEU THR SER CYS GLU PHE LEU LYS TYR ILE LEU SEQRES 9 A 680 LEU VAL LYS GLN GLY ASP CYS PRO ALA PRO GLU LYS ALA SEQRES 10 A 680 SER GLY PHE ALA ALA ALA CYS VAL GLU SER CYS GLU VAL SEQRES 11 A 680 ASP ASN GLU CYS SER GLY VAL LYS LYS CYS CYS SER ASN SEQRES 12 A 680 GLY CYS GLY HIS THR CYS GLN VAL PRO LYS THR LEU TYR SEQRES 13 A 680 LYS GLY VAL PRO LEU LYS PRO ARG LYS GLU LEU ARG PHE SEQRES 14 A 680 THR GLU LEU GLN SER GLY GLN LEU GLU VAL LYS TRP SER SEQRES 15 A 680 SER LYS PHE ASN ILE SER ILE GLU PRO VAL ILE TYR VAL SEQRES 16 A 680 VAL GLN ARG ARG TRP ASN TYR GLY ILE HIS PRO SER GLU SEQRES 17 A 680 ASP ASP ALA THR HIS TRP GLN THR VAL ALA GLN THR THR SEQRES 18 A 680 ASP GLU ARG VAL GLN LEU THR ASP ILE ARG PRO SER ARG SEQRES 19 A 680 TRP TYR GLN PHE ARG VAL ALA ALA VAL ASN VAL HIS GLY SEQRES 20 A 680 THR ARG GLY PHE THR ALA PRO SER LYS HIS PHE ARG SER SEQRES 21 A 680 SER LYS ASP PRO SER ALA PRO PRO ALA PRO ALA ASN LEU SEQRES 22 A 680 ARG LEU ALA ASN SER THR VAL ASN SER ASP GLY SER VAL SEQRES 23 A 680 THR VAL THR ILE VAL TRP ASP LEU PRO GLU GLU PRO ASP SEQRES 24 A 680 ILE PRO VAL HIS HIS TYR LYS VAL PHE TRP SER TRP MET SEQRES 25 A 680 VAL SER SER LYS SER LEU VAL PRO THR LYS LYS LYS ARG SEQRES 26 A 680 ARG LYS THR THR ASP GLY PHE GLN ASN SER VAL ILE LEU SEQRES 27 A 680 GLU LYS LEU GLN PRO ASP CYS ASP TYR VAL VAL GLU LEU SEQRES 28 A 680 GLN ALA ILE THR TYR TRP GLY GLN THR ARG LEU LYS SER SEQRES 29 A 680 ALA LYS VAL SER LEU HIS PHE THR SER THR HIS ALA THR SEQRES 30 A 680 ASN ASN LYS GLU GLN LEU VAL LYS THR ARG LYS GLY GLY SEQRES 31 A 680 ILE GLN THR GLN LEU PRO PHE GLN ARG ARG ARG PRO THR SEQRES 32 A 680 ARG PRO LEU GLU VAL GLY ALA PRO PHE TYR GLN ASP GLY SEQRES 33 A 680 GLN LEU GLN VAL LYS VAL TYR TRP LYS LYS THR GLU ASP SEQRES 34 A 680 PRO THR VAL ASN ARG TYR HIS VAL ARG TRP PHE PRO GLU SEQRES 35 A 680 ALA CYS ALA HIS ASN ARG THR THR GLY SER GLU ALA SER SEQRES 36 A 680 SER GLY MET THR HIS GLU ASN TYR ILE ILE LEU GLN ASP SEQRES 37 A 680 LEU SER PHE SER CYS LYS TYR LYS VAL THR VAL GLN PRO SEQRES 38 A 680 ILE ARG PRO LYS SER HIS SER LYS ALA GLU ALA VAL PHE SEQRES 39 A 680 PHE THR THR PRO PRO CYS SER ALA LEU LYS GLY LYS SER SEQRES 40 A 680 HIS LYS PRO ILE GLY CYS LEU GLY GLU ALA GLY HIS VAL SEQRES 41 A 680 LEU SER LYS VAL LEU ALA LYS PRO GLU ASN LEU SER ALA SEQRES 42 A 680 SER PHE ILE VAL GLN ASP VAL ASN ILE THR GLY HIS PHE SEQRES 43 A 680 SER TRP LYS MET ALA LYS ALA ASN LEU TYR GLN PRO MET SEQRES 44 A 680 THR GLY PHE GLN VAL THR TRP ALA GLU VAL THR THR GLU SEQRES 45 A 680 SER ARG GLN ASN SER LEU PRO ASN SER ILE ILE SER GLN SEQRES 46 A 680 SER GLN ILE LEU PRO SER ASP HIS TYR VAL LEU THR VAL SEQRES 47 A 680 PRO ASN LEU ARG PRO SER THR LEU TYR ARG LEU GLU VAL SEQRES 48 A 680 GLN VAL LEU THR PRO GLY GLY GLU GLY PRO ALA THR ILE SEQRES 49 A 680 LYS THR PHE ARG THR PRO GLU LEU PRO PRO SER SER ALA SEQRES 50 A 680 HIS ARG SER HIS LEU LYS HIS ARG HIS PRO HIS HIS TYR SEQRES 51 A 680 LYS PRO SER PRO GLU ARG TYR GLY LYS PRO ILE PRO ASN SEQRES 52 A 680 PRO LEU LEU GLY LEU ASP SER THR ARG THR GLY HIS HIS SEQRES 53 A 680 HIS HIS HIS HIS CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000