data_1ZLK # _entry.id 1ZLK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZLK pdb_00001zlk 10.2210/pdb1zlk/pdb NDB PD0651 ? ? RCSB RCSB032860 ? ? WWPDB D_1000032860 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1ZLJ _pdbx_database_related.details 'Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZLK _pdbx_database_status.recvd_initial_deposition_date 2005-05-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wisedchaisri, G.' 1 'Wu, M.' 2 'Rice, A.E.' 3 'Roberts, D.M.' 4 'Sherman, D.R.' 5 'Hol, W.G.J.' 6 # _citation.id primary _citation.title ;Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 354 _citation.page_first 630 _citation.page_last 641 _citation.year 2005 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16246368 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.09.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wisedchaisri, G.' 1 ? primary 'Wu, M.' 2 ? primary 'Rice, A.E.' 3 ? primary 'Roberts, D.M.' 4 ? primary 'Sherman, D.R.' 5 ? primary 'Hol, W.G.J.' 6 ? # _cell.entry_id 1ZLK _cell.length_a 142.397 _cell.length_b 58.791 _cell.length_c 82.933 _cell.angle_alpha 90.00 _cell.angle_beta 125.50 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZLK _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;5'-D(*GP*GP*CP*CP*CP*GP*CP*GP*CP*TP*TP*TP*GP*GP*GP*GP*AP*CP*TP*AP*AP*AP*GP*TP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*GP*GP*CP*CP*AP*CP*GP*AP*T)-3' ; 13182.437 1 ? ? ? ? 2 polymer syn ;5'-D(*CP*GP*TP*GP*GP*CP*CP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*AP*CP*TP*TP*TP*AP*GP*TP*CP*CP*CP*CP*AP*AP*AP*GP*CP*GP*CP*GP*GP*GP*CP*CP*AP*T)-3' ; 13302.508 1 ? ? ? ? 3 polymer man 'Dormancy Survival Regulator' 10513.998 2 ? ? 'C-terminal domain' ? # _entity_name_com.entity_id 3 _entity_name_com.name DosR # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DG)(DC)(DC)(DC)(DG)(DC)(DG)(DC)(DT)(DT)(DT)(DG)(DG)(DG)(DG)(DA)(DC)(DT)(DA) (DA)(DA)(DG)(DT)(DC)(DC)(DC)(DT)(DA)(DA)(DC)(DC)(DC)(DT)(DG)(DG)(DC)(DC)(DA)(DC) (DG)(DA)(DT) ; GGCCCGCGCTTTGGGGACTAAAGTCCCTAACCCTGGCCACGAT C ? 2 polydeoxyribonucleotide no no ;(DC)(DG)(DT)(DG)(DG)(DC)(DC)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DA)(DC)(DT) (DT)(DT)(DA)(DG)(DT)(DC)(DC)(DC)(DC)(DA)(DA)(DA)(DG)(DC)(DG)(DC)(DG)(DG)(DG)(DC) (DC)(DA)(DT) ; CGTGGCCAGGGTTAGGGACTTTAGTCCCCAAAGCGCGGGCCAT D ? 3 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAV FATELKRSRPPGDGP ; ;MGSSHHHHHHSSGLVPRGSHMQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAV FATELKRSRPPGDGP ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DC n 1 4 DC n 1 5 DC n 1 6 DG n 1 7 DC n 1 8 DG n 1 9 DC n 1 10 DT n 1 11 DT n 1 12 DT n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DG n 1 17 DA n 1 18 DC n 1 19 DT n 1 20 DA n 1 21 DA n 1 22 DA n 1 23 DG n 1 24 DT n 1 25 DC n 1 26 DC n 1 27 DC n 1 28 DT n 1 29 DA n 1 30 DA n 1 31 DC n 1 32 DC n 1 33 DC n 1 34 DT n 1 35 DG n 1 36 DG n 1 37 DC n 1 38 DC n 1 39 DA n 1 40 DC n 1 41 DG n 1 42 DA n 1 43 DT n 2 1 DC n 2 2 DG n 2 3 DT n 2 4 DG n 2 5 DG n 2 6 DC n 2 7 DC n 2 8 DA n 2 9 DG n 2 10 DG n 2 11 DG n 2 12 DT n 2 13 DT n 2 14 DA n 2 15 DG n 2 16 DG n 2 17 DG n 2 18 DA n 2 19 DC n 2 20 DT n 2 21 DT n 2 22 DT n 2 23 DA n 2 24 DG n 2 25 DT n 2 26 DC n 2 27 DC n 2 28 DC n 2 29 DC n 2 30 DA n 2 31 DA n 2 32 DA n 2 33 DG n 2 34 DC n 2 35 DG n 2 36 DC n 2 37 DG n 2 38 DG n 2 39 DG n 2 40 DC n 2 41 DC n 2 42 DA n 2 43 DT n 3 1 MET n 3 2 GLY n 3 3 SER n 3 4 SER n 3 5 HIS n 3 6 HIS n 3 7 HIS n 3 8 HIS n 3 9 HIS n 3 10 HIS n 3 11 SER n 3 12 SER n 3 13 GLY n 3 14 LEU n 3 15 VAL n 3 16 PRO n 3 17 ARG n 3 18 GLY n 3 19 SER n 3 20 HIS n 3 21 MET n 3 22 GLN n 3 23 ASP n 3 24 PRO n 3 25 LEU n 3 26 SER n 3 27 GLY n 3 28 LEU n 3 29 THR n 3 30 ASP n 3 31 GLN n 3 32 GLU n 3 33 ARG n 3 34 THR n 3 35 LEU n 3 36 LEU n 3 37 GLY n 3 38 LEU n 3 39 LEU n 3 40 SER n 3 41 GLU n 3 42 GLY n 3 43 LEU n 3 44 THR n 3 45 ASN n 3 46 LYS n 3 47 GLN n 3 48 ILE n 3 49 ALA n 3 50 ASP n 3 51 ARG n 3 52 MET n 3 53 PHE n 3 54 LEU n 3 55 ALA n 3 56 GLU n 3 57 LYS n 3 58 THR n 3 59 VAL n 3 60 LYS n 3 61 ASN n 3 62 TYR n 3 63 VAL n 3 64 SER n 3 65 ARG n 3 66 LEU n 3 67 LEU n 3 68 ALA n 3 69 LYS n 3 70 LEU n 3 71 GLY n 3 72 MET n 3 73 GLU n 3 74 ARG n 3 75 ARG n 3 76 THR n 3 77 GLN n 3 78 ALA n 3 79 ALA n 3 80 VAL n 3 81 PHE n 3 82 ALA n 3 83 THR n 3 84 GLU n 3 85 LEU n 3 86 LYS n 3 87 ARG n 3 88 SER n 3 89 ARG n 3 90 PRO n 3 91 PRO n 3 92 GLY n 3 93 ASP n 3 94 GLY n 3 95 PRO n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Mycobacterium _entity_src_gen.pdbx_gene_src_gene 'dosR, devR, Rv3133c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 GB NP_217649 15610269 3 QDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRSRPPGDGP 144 ? 2 PDB 1ZLK 1ZLK 1 ? ? ? 3 PDB 1ZLK 1ZLK 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZLK A 22 ? 95 ? 15610269 144 ? 217 ? 144 217 2 1 1ZLK B 22 ? 95 ? 15610269 144 ? 217 ? 144 217 3 2 1ZLK C 1 ? 43 ? 1ZLK 1 ? 43 ? 1 43 4 3 1ZLK D 1 ? 43 ? 1ZLK 0 ? 42 ? 0 42 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ZLK MET A 1 ? GB 15610269 ? ? 'cloning artifact' 123 1 1 1ZLK GLY A 2 ? GB 15610269 ? ? 'cloning artifact' 124 2 1 1ZLK SER A 3 ? GB 15610269 ? ? 'cloning artifact' 125 3 1 1ZLK SER A 4 ? GB 15610269 ? ? 'cloning artifact' 126 4 1 1ZLK HIS A 5 ? GB 15610269 ? ? 'expression tag' 127 5 1 1ZLK HIS A 6 ? GB 15610269 ? ? 'expression tag' 128 6 1 1ZLK HIS A 7 ? GB 15610269 ? ? 'expression tag' 129 7 1 1ZLK HIS A 8 ? GB 15610269 ? ? 'expression tag' 130 8 1 1ZLK HIS A 9 ? GB 15610269 ? ? 'expression tag' 131 9 1 1ZLK HIS A 10 ? GB 15610269 ? ? 'expression tag' 132 10 1 1ZLK SER A 11 ? GB 15610269 ? ? 'cloning artifact' 133 11 1 1ZLK SER A 12 ? GB 15610269 ? ? 'cloning artifact' 134 12 1 1ZLK GLY A 13 ? GB 15610269 ? ? 'cloning artifact' 135 13 1 1ZLK LEU A 14 ? GB 15610269 ? ? 'cloning artifact' 136 14 1 1ZLK VAL A 15 ? GB 15610269 ? ? 'cloning artifact' 137 15 1 1ZLK PRO A 16 ? GB 15610269 ? ? 'cloning artifact' 138 16 1 1ZLK ARG A 17 ? GB 15610269 ? ? 'cloning artifact' 139 17 1 1ZLK GLY A 18 ? GB 15610269 ? ? 'cloning artifact' 140 18 1 1ZLK SER A 19 ? GB 15610269 ? ? 'cloning artifact' 141 19 1 1ZLK HIS A 20 ? GB 15610269 ? ? 'cloning artifact' 142 20 1 1ZLK MET A 21 ? GB 15610269 ? ? 'cloning artifact' 143 21 2 1ZLK MET B 1 ? GB 15610269 ? ? 'cloning artifact' 123 22 2 1ZLK GLY B 2 ? GB 15610269 ? ? 'cloning artifact' 124 23 2 1ZLK SER B 3 ? GB 15610269 ? ? 'cloning artifact' 125 24 2 1ZLK SER B 4 ? GB 15610269 ? ? 'cloning artifact' 126 25 2 1ZLK HIS B 5 ? GB 15610269 ? ? 'expression tag' 127 26 2 1ZLK HIS B 6 ? GB 15610269 ? ? 'expression tag' 128 27 2 1ZLK HIS B 7 ? GB 15610269 ? ? 'expression tag' 129 28 2 1ZLK HIS B 8 ? GB 15610269 ? ? 'expression tag' 130 29 2 1ZLK HIS B 9 ? GB 15610269 ? ? 'expression tag' 131 30 2 1ZLK HIS B 10 ? GB 15610269 ? ? 'expression tag' 132 31 2 1ZLK SER B 11 ? GB 15610269 ? ? 'cloning artifact' 133 32 2 1ZLK SER B 12 ? GB 15610269 ? ? 'cloning artifact' 134 33 2 1ZLK GLY B 13 ? GB 15610269 ? ? 'cloning artifact' 135 34 2 1ZLK LEU B 14 ? GB 15610269 ? ? 'cloning artifact' 136 35 2 1ZLK VAL B 15 ? GB 15610269 ? ? 'cloning artifact' 137 36 2 1ZLK PRO B 16 ? GB 15610269 ? ? 'cloning artifact' 138 37 2 1ZLK ARG B 17 ? GB 15610269 ? ? 'cloning artifact' 139 38 2 1ZLK GLY B 18 ? GB 15610269 ? ? 'cloning artifact' 140 39 2 1ZLK SER B 19 ? GB 15610269 ? ? 'cloning artifact' 141 40 2 1ZLK HIS B 20 ? GB 15610269 ? ? 'cloning artifact' 142 41 2 1ZLK MET B 21 ? GB 15610269 ? ? 'cloning artifact' 143 42 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZLK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.97 _exptl_crystal.density_percent_sol 58.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details 'PEG 400, HEPES, calcium chloride, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 HEPES ? ? ? 1 3 1 'calcium chloride' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 400' ? ? ? 1 6 2 HEPES ? ? ? 1 7 2 'calcium chloride' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2003-03-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96411 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.96411 # _reflns.entry_id 1ZLK _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 8211 _reflns.percent_possible_obs 79.5 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.7 _reflns.B_iso_Wilson_estimate 72.8 _reflns.pdbx_redundancy 3.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_all 60.7 _reflns_shell.Rmerge_I_obs 0.482 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.03 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ZLK _refine.ls_number_reflns_obs 7800 _refine.ls_number_reflns_all 7800 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 3.10 _refine.ls_percent_reflns_obs 79.66 _refine.ls_R_factor_obs 0.27233 _refine.ls_R_factor_all 0.27233 _refine.ls_R_factor_R_work 0.27154 _refine.ls_R_factor_R_free 0.28802 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 407 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.892 _refine.correlation_coeff_Fo_to_Fc_free 0.865 _refine.B_iso_mean 82.903 _refine.aniso_B[1][1] -1.05 _refine.aniso_B[2][2] -4.00 _refine.aniso_B[3][3] 8.37 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 2.86 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 1ZLJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Overall _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.996 _refine.pdbx_overall_ESU_R_Free 0.499 _refine.overall_SU_ML 0.394 _refine.overall_SU_B 23.638 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1010 _refine_hist.pdbx_number_atoms_nucleic_acid 1008 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2018 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.021 ? 2148 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1471 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.086 2.565 ? 3104 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.841 3.000 ? 3503 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.242 5.000 ? 128 'X-RAY DIFFRACTION' ? r_chiral_restr 0.048 0.200 ? 313 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1622 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 206 'X-RAY DIFFRACTION' ? r_nbd_refined 0.220 0.300 ? 524 'X-RAY DIFFRACTION' ? r_nbd_other 0.258 0.300 ? 1961 'X-RAY DIFFRACTION' ? r_nbtor_other 0.088 0.500 ? 1001 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.227 0.500 ? 67 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.254 0.300 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.262 0.300 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.087 0.500 ? 1 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_asym_id 1 C 384 0.05 0.10 'tight positional' ? ? ? ? ? 1 'X-RAY DIFFRACTION' 1 ? 1 C 619 0.19 0.40 'medium positional' ? ? ? ? ? 1 'X-RAY DIFFRACTION' 2 ? 2 A 360 0.14 0.40 'medium positional' ? ? ? ? ? 2 'X-RAY DIFFRACTION' 3 ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.10 _refine_ls_shell.d_res_low 3.183 _refine_ls_shell.number_reflns_R_work 385 _refine_ls_shell.R_factor_R_work 0.427 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.569 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 C 2 2 D 2 3 C 2 4 D # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 C ASP 23 . C ARG 87 . A ASP 145 A ARG 209 2 ? 1 2 1 D ASP 23 . D ARG 87 . B ASP 145 B ARG 209 2 ? 2 1 1 A DG 14 . A DT 19 . C DG 14 C DT 19 4 ? 2 2 1 B DG 15 . B DT 20 . D DG 14 D DT 19 4 ? 2 3 2 A DA 22 . A DC 27 . C DA 22 C DC 27 4 ? 2 4 2 B DA 23 . B DC 28 . D DA 22 D DC 27 4 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 1ZLK _struct.title 'Crystal Structure of the Mycobacterium tuberculosis Hypoxic Response Regulator DosR C-terminal Domain-DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZLK _struct_keywords.pdbx_keywords Transcription/DNA _struct_keywords.text 'helix-turn-helix, protein-DNA complex, Transcription-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The asymmetric unit contains 2 biological protein monomers forming one functional dimer bound to double-stranded oligonucleotide.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU C 38 ? GLY C 42 ? LEU A 160 GLY A 164 5 ? 5 HELX_P HELX_P2 2 THR C 44 ? ARG C 51 ? THR A 166 ARG A 173 1 ? 8 HELX_P HELX_P3 3 ALA C 55 ? GLY C 71 ? ALA A 177 GLY A 193 1 ? 17 HELX_P HELX_P4 4 ARG C 74 ? ARG C 87 ? ARG A 196 ARG A 209 1 ? 14 HELX_P HELX_P5 5 ARG D 33 ? LEU D 38 ? ARG B 155 LEU B 160 1 ? 6 HELX_P HELX_P6 6 LEU D 39 ? GLY D 42 ? LEU B 161 GLY B 164 5 ? 4 HELX_P HELX_P7 7 THR D 44 ? ARG D 51 ? THR B 166 ARG B 173 1 ? 8 HELX_P HELX_P8 8 ALA D 55 ? GLY D 71 ? ALA B 177 GLY B 193 1 ? 17 HELX_P HELX_P9 9 ARG D 74 ? ARG D 87 ? ARG B 196 ARG B 209 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 32 N1 ? ? C DT 10 D DA 31 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog2 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 31 N1 ? ? C DT 11 D DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 31 N6 ? ? C DT 11 D DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 28 N3 ? ? C DG 14 D DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 28 O2 ? ? C DG 14 D DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 28 N4 ? ? C DG 14 D DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 27 N3 ? ? C DG 15 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 27 O2 ? ? C DG 15 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 27 N4 ? ? C DG 15 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 26 N3 ? ? C DG 16 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 26 O2 ? ? C DG 16 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 26 N4 ? ? C DG 16 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 27 O2 ? ? C DG 16 D DC 26 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog14 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 25 N3 ? ? C DA 17 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 25 O4 ? ? C DA 17 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 24 N1 ? ? C DC 18 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 24 O6 ? ? C DC 18 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 24 N2 ? ? C DC 18 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 19 N3 ? ? ? 1_555 B DA 23 N1 ? ? C DT 19 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 19 O4 ? ? ? 1_555 B DA 23 N6 ? ? C DT 19 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 19 O2 ? ? ? 1_555 B DG 24 N2 ? ? C DT 19 D DG 23 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? hydrog22 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 22 N3 ? ? C DA 20 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 22 O4 ? ? C DA 20 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 21 N1 ? ? ? 1_555 B DT 21 N3 ? ? C DA 21 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 21 N6 ? ? ? 1_555 B DT 21 O4 ? ? C DA 21 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 22 N1 ? ? ? 1_555 B DT 20 N3 ? ? C DA 22 D DT 19 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog27 hydrog ? ? A DG 23 N1 ? ? ? 1_555 B DC 19 N3 ? ? C DG 23 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 23 N2 ? ? ? 1_555 B DC 19 O2 ? ? C DG 23 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 23 O6 ? ? ? 1_555 B DC 19 N4 ? ? C DG 23 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 24 N3 ? ? ? 1_555 B DA 18 N1 ? ? C DT 24 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 24 O4 ? ? ? 1_555 B DA 18 N6 ? ? C DT 24 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 25 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 25 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 25 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 25 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 25 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 25 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 26 N3 ? ? ? 1_555 B DG 16 N1 ? ? C DC 26 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 26 N4 ? ? ? 1_555 B DG 16 O6 ? ? C DC 26 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 26 O2 ? ? ? 1_555 B DG 16 N2 ? ? C DC 26 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 27 N3 ? ? ? 1_555 B DG 15 N1 ? ? C DC 27 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 27 N4 ? ? ? 1_555 B DG 15 O6 ? ? C DC 27 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 27 O2 ? ? ? 1_555 B DG 15 N2 ? ? C DC 27 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DT 28 N3 ? ? ? 1_555 B DA 14 N1 ? ? C DT 28 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DT 28 O4 ? ? ? 1_555 B DA 14 N6 ? ? C DT 28 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 29 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 29 D DT 12 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog44 hydrog ? ? A DA 30 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 30 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DA 30 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 30 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DC 31 N3 ? ? ? 1_555 B DG 11 N1 ? ? C DC 31 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DC 31 N4 ? ? ? 1_555 B DG 11 O6 ? ? C DC 31 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DC 31 O2 ? ? ? 1_555 B DG 11 N2 ? ? C DC 31 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1ZLK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZLK _atom_sites.fract_transf_matrix[1][1] 0.007023 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005009 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017009 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014811 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 ? ? ? C . n A 1 2 DG 2 2 ? ? ? C . n A 1 3 DC 3 3 ? ? ? C . n A 1 4 DC 4 4 ? ? ? C . n A 1 5 DC 5 5 ? ? ? C . n A 1 6 DG 6 6 ? ? ? C . n A 1 7 DC 7 7 ? ? ? C . n A 1 8 DG 8 8 8 DG G C . n A 1 9 DC 9 9 9 DC C C . n A 1 10 DT 10 10 10 DT T C . n A 1 11 DT 11 11 11 DT T C . n A 1 12 DT 12 12 12 DT T C . n A 1 13 DG 13 13 13 DG G C . n A 1 14 DG 14 14 14 DG G C . n A 1 15 DG 15 15 15 DG G C . n A 1 16 DG 16 16 16 DG G C . n A 1 17 DA 17 17 17 DA A C . n A 1 18 DC 18 18 18 DC C C . n A 1 19 DT 19 19 19 DT T C . n A 1 20 DA 20 20 20 DA A C . n A 1 21 DA 21 21 21 DA A C . n A 1 22 DA 22 22 22 DA A C . n A 1 23 DG 23 23 23 DG G C . n A 1 24 DT 24 24 24 DT T C . n A 1 25 DC 25 25 25 DC C C . n A 1 26 DC 26 26 26 DC C C . n A 1 27 DC 27 27 27 DC C C . n A 1 28 DT 28 28 28 DT T C . n A 1 29 DA 29 29 29 DA A C . n A 1 30 DA 30 30 30 DA A C . n A 1 31 DC 31 31 31 DC C C . n A 1 32 DC 32 32 ? ? ? C . n A 1 33 DC 33 33 ? ? ? C . n A 1 34 DT 34 34 ? ? ? C . n A 1 35 DG 35 35 ? ? ? C . n A 1 36 DG 36 36 ? ? ? C . n A 1 37 DC 37 37 ? ? ? C . n A 1 38 DC 38 38 ? ? ? C . n A 1 39 DA 39 39 ? ? ? C . n A 1 40 DC 40 40 ? ? ? C . n A 1 41 DG 41 41 ? ? ? C . n A 1 42 DA 42 42 ? ? ? C . n A 1 43 DT 43 43 ? ? ? C . n B 2 1 DC 1 0 ? ? ? D . n B 2 2 DG 2 1 ? ? ? D . n B 2 3 DT 3 2 ? ? ? D . n B 2 4 DG 4 3 ? ? ? D . n B 2 5 DG 5 4 ? ? ? D . n B 2 6 DC 6 5 ? ? ? D . n B 2 7 DC 7 6 ? ? ? D . n B 2 8 DA 8 7 7 DA A D . n B 2 9 DG 9 8 8 DG G D . n B 2 10 DG 10 9 9 DG G D . n B 2 11 DG 11 10 10 DG G D . n B 2 12 DT 12 11 11 DT T D . n B 2 13 DT 13 12 12 DT T D . n B 2 14 DA 14 13 13 DA A D . n B 2 15 DG 15 14 14 DG G D . n B 2 16 DG 16 15 15 DG G D . n B 2 17 DG 17 16 16 DG G D . n B 2 18 DA 18 17 17 DA A D . n B 2 19 DC 19 18 18 DC C D . n B 2 20 DT 20 19 19 DT T D . n B 2 21 DT 21 20 20 DT T D . n B 2 22 DT 22 21 21 DT T D . n B 2 23 DA 23 22 22 DA A D . n B 2 24 DG 24 23 23 DG G D . n B 2 25 DT 25 24 24 DT T D . n B 2 26 DC 26 25 25 DC C D . n B 2 27 DC 27 26 26 DC C D . n B 2 28 DC 28 27 27 DC C D . n B 2 29 DC 29 28 28 DC C D . n B 2 30 DA 30 29 29 DA A D . n B 2 31 DA 31 30 30 DA A D . n B 2 32 DA 32 31 31 DA A D . n B 2 33 DG 33 32 ? ? ? D . n B 2 34 DC 34 33 ? ? ? D . n B 2 35 DG 35 34 ? ? ? D . n B 2 36 DC 36 35 ? ? ? D . n B 2 37 DG 37 36 ? ? ? D . n B 2 38 DG 38 37 ? ? ? D . n B 2 39 DG 39 38 ? ? ? D . n B 2 40 DC 40 39 ? ? ? D . n B 2 41 DC 41 40 ? ? ? D . n B 2 42 DA 42 41 ? ? ? D . n B 2 43 DT 43 42 ? ? ? D . n C 3 1 MET 1 123 ? ? ? A . n C 3 2 GLY 2 124 ? ? ? A . n C 3 3 SER 3 125 ? ? ? A . n C 3 4 SER 4 126 ? ? ? A . n C 3 5 HIS 5 127 ? ? ? A . n C 3 6 HIS 6 128 ? ? ? A . n C 3 7 HIS 7 129 ? ? ? A . n C 3 8 HIS 8 130 ? ? ? A . n C 3 9 HIS 9 131 ? ? ? A . n C 3 10 HIS 10 132 ? ? ? A . n C 3 11 SER 11 133 ? ? ? A . n C 3 12 SER 12 134 ? ? ? A . n C 3 13 GLY 13 135 ? ? ? A . n C 3 14 LEU 14 136 ? ? ? A . n C 3 15 VAL 15 137 ? ? ? A . n C 3 16 PRO 16 138 ? ? ? A . n C 3 17 ARG 17 139 ? ? ? A . n C 3 18 GLY 18 140 ? ? ? A . n C 3 19 SER 19 141 ? ? ? A . n C 3 20 HIS 20 142 ? ? ? A . n C 3 21 MET 21 143 ? ? ? A . n C 3 22 GLN 22 144 ? ? ? A . n C 3 23 ASP 23 145 145 ASP ASP A . n C 3 24 PRO 24 146 146 PRO PRO A . n C 3 25 LEU 25 147 147 LEU LEU A . n C 3 26 SER 26 148 148 SER SER A . n C 3 27 GLY 27 149 149 GLY GLY A . n C 3 28 LEU 28 150 150 LEU LEU A . n C 3 29 THR 29 151 151 THR THR A . n C 3 30 ASP 30 152 152 ASP ASP A . n C 3 31 GLN 31 153 153 GLN GLN A . n C 3 32 GLU 32 154 154 GLU GLU A . n C 3 33 ARG 33 155 155 ARG ARG A . n C 3 34 THR 34 156 156 THR THR A . n C 3 35 LEU 35 157 157 LEU LEU A . n C 3 36 LEU 36 158 158 LEU LEU A . n C 3 37 GLY 37 159 159 GLY GLY A . n C 3 38 LEU 38 160 160 LEU LEU A . n C 3 39 LEU 39 161 161 LEU LEU A . n C 3 40 SER 40 162 162 SER SER A . n C 3 41 GLU 41 163 163 GLU GLU A . n C 3 42 GLY 42 164 164 GLY GLY A . n C 3 43 LEU 43 165 165 LEU LEU A . n C 3 44 THR 44 166 166 THR THR A . n C 3 45 ASN 45 167 167 ASN ASN A . n C 3 46 LYS 46 168 168 LYS LYS A . n C 3 47 GLN 47 169 169 GLN GLN A . n C 3 48 ILE 48 170 170 ILE ILE A . n C 3 49 ALA 49 171 171 ALA ALA A . n C 3 50 ASP 50 172 172 ASP ASP A . n C 3 51 ARG 51 173 173 ARG ARG A . n C 3 52 MET 52 174 174 MET MET A . n C 3 53 PHE 53 175 175 PHE PHE A . n C 3 54 LEU 54 176 176 LEU LEU A . n C 3 55 ALA 55 177 177 ALA ALA A . n C 3 56 GLU 56 178 178 GLU GLU A . n C 3 57 LYS 57 179 179 LYS LYS A . n C 3 58 THR 58 180 180 THR THR A . n C 3 59 VAL 59 181 181 VAL VAL A . n C 3 60 LYS 60 182 182 LYS LYS A . n C 3 61 ASN 61 183 183 ASN ASN A . n C 3 62 TYR 62 184 184 TYR TYR A . n C 3 63 VAL 63 185 185 VAL VAL A . n C 3 64 SER 64 186 186 SER SER A . n C 3 65 ARG 65 187 187 ARG ARG A . n C 3 66 LEU 66 188 188 LEU LEU A . n C 3 67 LEU 67 189 189 LEU LEU A . n C 3 68 ALA 68 190 190 ALA ALA A . n C 3 69 LYS 69 191 191 LYS LYS A . n C 3 70 LEU 70 192 192 LEU LEU A . n C 3 71 GLY 71 193 193 GLY GLY A . n C 3 72 MET 72 194 194 MET MET A . n C 3 73 GLU 73 195 195 GLU GLU A . n C 3 74 ARG 74 196 196 ARG ARG A . n C 3 75 ARG 75 197 197 ARG ARG A . n C 3 76 THR 76 198 198 THR THR A . n C 3 77 GLN 77 199 199 GLN GLN A . n C 3 78 ALA 78 200 200 ALA ALA A . n C 3 79 ALA 79 201 201 ALA ALA A . n C 3 80 VAL 80 202 202 VAL VAL A . n C 3 81 PHE 81 203 203 PHE PHE A . n C 3 82 ALA 82 204 204 ALA ALA A . n C 3 83 THR 83 205 205 THR THR A . n C 3 84 GLU 84 206 206 GLU GLU A . n C 3 85 LEU 85 207 207 LEU LEU A . n C 3 86 LYS 86 208 208 LYS LYS A . n C 3 87 ARG 87 209 209 ARG ARG A . n C 3 88 SER 88 210 ? ? ? A . n C 3 89 ARG 89 211 ? ? ? A . n C 3 90 PRO 90 212 ? ? ? A . n C 3 91 PRO 91 213 ? ? ? A . n C 3 92 GLY 92 214 ? ? ? A . n C 3 93 ASP 93 215 ? ? ? A . n C 3 94 GLY 94 216 ? ? ? A . n C 3 95 PRO 95 217 ? ? ? A . n D 3 1 MET 1 123 ? ? ? B . n D 3 2 GLY 2 124 ? ? ? B . n D 3 3 SER 3 125 ? ? ? B . n D 3 4 SER 4 126 ? ? ? B . n D 3 5 HIS 5 127 ? ? ? B . n D 3 6 HIS 6 128 ? ? ? B . n D 3 7 HIS 7 129 ? ? ? B . n D 3 8 HIS 8 130 ? ? ? B . n D 3 9 HIS 9 131 ? ? ? B . n D 3 10 HIS 10 132 ? ? ? B . n D 3 11 SER 11 133 ? ? ? B . n D 3 12 SER 12 134 ? ? ? B . n D 3 13 GLY 13 135 ? ? ? B . n D 3 14 LEU 14 136 ? ? ? B . n D 3 15 VAL 15 137 ? ? ? B . n D 3 16 PRO 16 138 ? ? ? B . n D 3 17 ARG 17 139 ? ? ? B . n D 3 18 GLY 18 140 ? ? ? B . n D 3 19 SER 19 141 ? ? ? B . n D 3 20 HIS 20 142 ? ? ? B . n D 3 21 MET 21 143 ? ? ? B . n D 3 22 GLN 22 144 ? ? ? B . n D 3 23 ASP 23 145 145 ASP ASP B . n D 3 24 PRO 24 146 146 PRO PRO B . n D 3 25 LEU 25 147 147 LEU LEU B . n D 3 26 SER 26 148 148 SER SER B . n D 3 27 GLY 27 149 149 GLY GLY B . n D 3 28 LEU 28 150 150 LEU LEU B . n D 3 29 THR 29 151 151 THR THR B . n D 3 30 ASP 30 152 152 ASP ASP B . n D 3 31 GLN 31 153 153 GLN GLN B . n D 3 32 GLU 32 154 154 GLU GLU B . n D 3 33 ARG 33 155 155 ARG ARG B . n D 3 34 THR 34 156 156 THR THR B . n D 3 35 LEU 35 157 157 LEU LEU B . n D 3 36 LEU 36 158 158 LEU LEU B . n D 3 37 GLY 37 159 159 GLY GLY B . n D 3 38 LEU 38 160 160 LEU LEU B . n D 3 39 LEU 39 161 161 LEU LEU B . n D 3 40 SER 40 162 162 SER SER B . n D 3 41 GLU 41 163 163 GLU GLU B . n D 3 42 GLY 42 164 164 GLY GLY B . n D 3 43 LEU 43 165 165 LEU LEU B . n D 3 44 THR 44 166 166 THR THR B . n D 3 45 ASN 45 167 167 ASN ASN B . n D 3 46 LYS 46 168 168 LYS LYS B . n D 3 47 GLN 47 169 169 GLN GLN B . n D 3 48 ILE 48 170 170 ILE ILE B . n D 3 49 ALA 49 171 171 ALA ALA B . n D 3 50 ASP 50 172 172 ASP ASP B . n D 3 51 ARG 51 173 173 ARG ARG B . n D 3 52 MET 52 174 174 MET MET B . n D 3 53 PHE 53 175 175 PHE PHE B . n D 3 54 LEU 54 176 176 LEU LEU B . n D 3 55 ALA 55 177 177 ALA ALA B . n D 3 56 GLU 56 178 178 GLU GLU B . n D 3 57 LYS 57 179 179 LYS LYS B . n D 3 58 THR 58 180 180 THR THR B . n D 3 59 VAL 59 181 181 VAL VAL B . n D 3 60 LYS 60 182 182 LYS LYS B . n D 3 61 ASN 61 183 183 ASN ASN B . n D 3 62 TYR 62 184 184 TYR TYR B . n D 3 63 VAL 63 185 185 VAL VAL B . n D 3 64 SER 64 186 186 SER SER B . n D 3 65 ARG 65 187 187 ARG ARG B . n D 3 66 LEU 66 188 188 LEU LEU B . n D 3 67 LEU 67 189 189 LEU LEU B . n D 3 68 ALA 68 190 190 ALA ALA B . n D 3 69 LYS 69 191 191 LYS LYS B . n D 3 70 LEU 70 192 192 LEU LEU B . n D 3 71 GLY 71 193 193 GLY GLY B . n D 3 72 MET 72 194 194 MET MET B . n D 3 73 GLU 73 195 195 GLU GLU B . n D 3 74 ARG 74 196 196 ARG ARG B . n D 3 75 ARG 75 197 197 ARG ARG B . n D 3 76 THR 76 198 198 THR THR B . n D 3 77 GLN 77 199 199 GLN GLN B . n D 3 78 ALA 78 200 200 ALA ALA B . n D 3 79 ALA 79 201 201 ALA ALA B . n D 3 80 VAL 80 202 202 VAL VAL B . n D 3 81 PHE 81 203 203 PHE PHE B . n D 3 82 ALA 82 204 204 ALA ALA B . n D 3 83 THR 83 205 205 THR THR B . n D 3 84 GLU 84 206 206 GLU GLU B . n D 3 85 LEU 85 207 207 LEU LEU B . n D 3 86 LYS 86 208 208 LYS LYS B . n D 3 87 ARG 87 209 209 ARG ARG B . n D 3 88 SER 88 210 ? ? ? B . n D 3 89 ARG 89 211 ? ? ? B . n D 3 90 PRO 90 212 ? ? ? B . n D 3 91 PRO 91 213 ? ? ? B . n D 3 92 GLY 92 214 ? ? ? B . n D 3 93 ASP 93 215 ? ? ? B . n D 3 94 GLY 94 216 ? ? ? B . n D 3 95 PRO 95 217 ? ? ? B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-31 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ncs_dom_lim 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 4 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 9 ? ? "C1'" C DC 9 ? ? N1 C DC 9 ? ? 110.15 108.30 1.85 0.30 N 2 1 "O4'" C DG 14 ? ? "C1'" C DG 14 ? ? N9 C DG 14 ? ? 110.43 108.30 2.13 0.30 N 3 1 "O4'" C DA 17 ? ? "C1'" C DA 17 ? ? N9 C DA 17 ? ? 111.65 108.30 3.35 0.30 N 4 1 "O4'" C DA 20 ? ? "C1'" C DA 20 ? ? N9 C DA 20 ? ? 112.17 108.30 3.87 0.30 N 5 1 "O4'" C DA 21 ? ? "C1'" C DA 21 ? ? N9 C DA 21 ? ? 111.57 108.30 3.27 0.30 N 6 1 "C3'" C DC 26 ? ? "C2'" C DC 26 ? ? "C1'" C DC 26 ? ? 97.35 102.40 -5.05 0.80 N 7 1 "O4'" C DC 26 ? ? "C1'" C DC 26 ? ? N1 C DC 26 ? ? 113.07 108.30 4.77 0.30 N 8 1 "O4'" C DC 27 ? ? "C1'" C DC 27 ? ? N1 C DC 27 ? ? 112.12 108.30 3.82 0.30 N 9 1 "O4'" C DT 28 ? ? "C1'" C DT 28 ? ? N1 C DT 28 ? ? 110.95 108.30 2.65 0.30 N 10 1 "O4'" D DT 11 ? ? "C1'" D DT 11 ? ? N1 D DT 11 ? ? 110.60 108.30 2.30 0.30 N 11 1 "O4'" D DG 14 ? ? "C1'" D DG 14 ? ? N9 D DG 14 ? ? 111.53 108.30 3.23 0.30 N 12 1 "O4'" D DA 17 ? ? "C1'" D DA 17 ? ? N9 D DA 17 ? ? 111.97 108.30 3.67 0.30 N 13 1 "O4'" D DC 26 ? ? "C1'" D DC 26 ? ? N1 D DC 26 ? ? 113.06 108.30 4.76 0.30 N 14 1 "O4'" D DC 27 ? ? "C1'" D DC 27 ? ? N1 D DC 27 ? ? 112.62 108.30 4.32 0.30 N 15 1 "O4'" D DC 28 ? ? "C1'" D DC 28 ? ? N1 D DC 28 ? ? 111.02 108.30 2.72 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 151 ? ? -61.98 -174.27 2 1 THR B 151 ? ? -64.48 -173.30 3 1 ASP B 152 ? ? -45.90 -70.67 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 209 ? CG ? C ARG 87 CG 2 1 Y 1 A ARG 209 ? CD ? C ARG 87 CD 3 1 Y 1 A ARG 209 ? NE ? C ARG 87 NE 4 1 Y 1 A ARG 209 ? CZ ? C ARG 87 CZ 5 1 Y 1 A ARG 209 ? NH1 ? C ARG 87 NH1 6 1 Y 1 A ARG 209 ? NH2 ? C ARG 87 NH2 7 1 Y 1 B ARG 209 ? CG ? D ARG 87 CG 8 1 Y 1 B ARG 209 ? CD ? D ARG 87 CD 9 1 Y 1 B ARG 209 ? NE ? D ARG 87 NE 10 1 Y 1 B ARG 209 ? CZ ? D ARG 87 CZ 11 1 Y 1 B ARG 209 ? NH1 ? D ARG 87 NH1 12 1 Y 1 B ARG 209 ? NH2 ? D ARG 87 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DG 1 ? A DG 1 2 1 Y 1 C DG 2 ? A DG 2 3 1 Y 1 C DC 3 ? A DC 3 4 1 Y 1 C DC 4 ? A DC 4 5 1 Y 1 C DC 5 ? A DC 5 6 1 Y 1 C DG 6 ? A DG 6 7 1 Y 1 C DC 7 ? A DC 7 8 1 Y 1 C DC 32 ? A DC 32 9 1 Y 1 C DC 33 ? A DC 33 10 1 Y 1 C DT 34 ? A DT 34 11 1 Y 1 C DG 35 ? A DG 35 12 1 Y 1 C DG 36 ? A DG 36 13 1 Y 1 C DC 37 ? A DC 37 14 1 Y 1 C DC 38 ? A DC 38 15 1 Y 1 C DA 39 ? A DA 39 16 1 Y 1 C DC 40 ? A DC 40 17 1 Y 1 C DG 41 ? A DG 41 18 1 Y 1 C DA 42 ? A DA 42 19 1 Y 1 C DT 43 ? A DT 43 20 1 Y 1 D DC 0 ? B DC 1 21 1 Y 1 D DG 1 ? B DG 2 22 1 Y 1 D DT 2 ? B DT 3 23 1 Y 1 D DG 3 ? B DG 4 24 1 Y 1 D DG 4 ? B DG 5 25 1 Y 1 D DC 5 ? B DC 6 26 1 Y 1 D DC 6 ? B DC 7 27 1 Y 1 D DG 32 ? B DG 33 28 1 Y 1 D DC 33 ? B DC 34 29 1 Y 1 D DG 34 ? B DG 35 30 1 Y 1 D DC 35 ? B DC 36 31 1 Y 1 D DG 36 ? B DG 37 32 1 Y 1 D DG 37 ? B DG 38 33 1 Y 1 D DG 38 ? B DG 39 34 1 Y 1 D DC 39 ? B DC 40 35 1 Y 1 D DC 40 ? B DC 41 36 1 Y 1 D DA 41 ? B DA 42 37 1 Y 1 D DT 42 ? B DT 43 38 1 Y 1 A MET 123 ? C MET 1 39 1 Y 1 A GLY 124 ? C GLY 2 40 1 Y 1 A SER 125 ? C SER 3 41 1 Y 1 A SER 126 ? C SER 4 42 1 Y 1 A HIS 127 ? C HIS 5 43 1 Y 1 A HIS 128 ? C HIS 6 44 1 Y 1 A HIS 129 ? C HIS 7 45 1 Y 1 A HIS 130 ? C HIS 8 46 1 Y 1 A HIS 131 ? C HIS 9 47 1 Y 1 A HIS 132 ? C HIS 10 48 1 Y 1 A SER 133 ? C SER 11 49 1 Y 1 A SER 134 ? C SER 12 50 1 Y 1 A GLY 135 ? C GLY 13 51 1 Y 1 A LEU 136 ? C LEU 14 52 1 Y 1 A VAL 137 ? C VAL 15 53 1 Y 1 A PRO 138 ? C PRO 16 54 1 Y 1 A ARG 139 ? C ARG 17 55 1 Y 1 A GLY 140 ? C GLY 18 56 1 Y 1 A SER 141 ? C SER 19 57 1 Y 1 A HIS 142 ? C HIS 20 58 1 Y 1 A MET 143 ? C MET 21 59 1 Y 1 A GLN 144 ? C GLN 22 60 1 Y 1 A SER 210 ? C SER 88 61 1 Y 1 A ARG 211 ? C ARG 89 62 1 Y 1 A PRO 212 ? C PRO 90 63 1 Y 1 A PRO 213 ? C PRO 91 64 1 Y 1 A GLY 214 ? C GLY 92 65 1 Y 1 A ASP 215 ? C ASP 93 66 1 Y 1 A GLY 216 ? C GLY 94 67 1 Y 1 A PRO 217 ? C PRO 95 68 1 Y 1 B MET 123 ? D MET 1 69 1 Y 1 B GLY 124 ? D GLY 2 70 1 Y 1 B SER 125 ? D SER 3 71 1 Y 1 B SER 126 ? D SER 4 72 1 Y 1 B HIS 127 ? D HIS 5 73 1 Y 1 B HIS 128 ? D HIS 6 74 1 Y 1 B HIS 129 ? D HIS 7 75 1 Y 1 B HIS 130 ? D HIS 8 76 1 Y 1 B HIS 131 ? D HIS 9 77 1 Y 1 B HIS 132 ? D HIS 10 78 1 Y 1 B SER 133 ? D SER 11 79 1 Y 1 B SER 134 ? D SER 12 80 1 Y 1 B GLY 135 ? D GLY 13 81 1 Y 1 B LEU 136 ? D LEU 14 82 1 Y 1 B VAL 137 ? D VAL 15 83 1 Y 1 B PRO 138 ? D PRO 16 84 1 Y 1 B ARG 139 ? D ARG 17 85 1 Y 1 B GLY 140 ? D GLY 18 86 1 Y 1 B SER 141 ? D SER 19 87 1 Y 1 B HIS 142 ? D HIS 20 88 1 Y 1 B MET 143 ? D MET 21 89 1 Y 1 B GLN 144 ? D GLN 22 90 1 Y 1 B SER 210 ? D SER 88 91 1 Y 1 B ARG 211 ? D ARG 89 92 1 Y 1 B PRO 212 ? D PRO 90 93 1 Y 1 B PRO 213 ? D PRO 91 94 1 Y 1 B GLY 214 ? D GLY 92 95 1 Y 1 B ASP 215 ? D ASP 93 96 1 Y 1 B GLY 216 ? D GLY 94 97 1 Y 1 B PRO 217 ? D PRO 95 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 ILE N N N N 287 ILE CA C N S 288 ILE C C N N 289 ILE O O N N 290 ILE CB C N S 291 ILE CG1 C N N 292 ILE CG2 C N N 293 ILE CD1 C N N 294 ILE OXT O N N 295 ILE H H N N 296 ILE H2 H N N 297 ILE HA H N N 298 ILE HB H N N 299 ILE HG12 H N N 300 ILE HG13 H N N 301 ILE HG21 H N N 302 ILE HG22 H N N 303 ILE HG23 H N N 304 ILE HD11 H N N 305 ILE HD12 H N N 306 ILE HD13 H N N 307 ILE HXT H N N 308 LEU N N N N 309 LEU CA C N S 310 LEU C C N N 311 LEU O O N N 312 LEU CB C N N 313 LEU CG C N N 314 LEU CD1 C N N 315 LEU CD2 C N N 316 LEU OXT O N N 317 LEU H H N N 318 LEU H2 H N N 319 LEU HA H N N 320 LEU HB2 H N N 321 LEU HB3 H N N 322 LEU HG H N N 323 LEU HD11 H N N 324 LEU HD12 H N N 325 LEU HD13 H N N 326 LEU HD21 H N N 327 LEU HD22 H N N 328 LEU HD23 H N N 329 LEU HXT H N N 330 LYS N N N N 331 LYS CA C N S 332 LYS C C N N 333 LYS O O N N 334 LYS CB C N N 335 LYS CG C N N 336 LYS CD C N N 337 LYS CE C N N 338 LYS NZ N N N 339 LYS OXT O N N 340 LYS H H N N 341 LYS H2 H N N 342 LYS HA H N N 343 LYS HB2 H N N 344 LYS HB3 H N N 345 LYS HG2 H N N 346 LYS HG3 H N N 347 LYS HD2 H N N 348 LYS HD3 H N N 349 LYS HE2 H N N 350 LYS HE3 H N N 351 LYS HZ1 H N N 352 LYS HZ2 H N N 353 LYS HZ3 H N N 354 LYS HXT H N N 355 MET N N N N 356 MET CA C N S 357 MET C C N N 358 MET O O N N 359 MET CB C N N 360 MET CG C N N 361 MET SD S N N 362 MET CE C N N 363 MET OXT O N N 364 MET H H N N 365 MET H2 H N N 366 MET HA H N N 367 MET HB2 H N N 368 MET HB3 H N N 369 MET HG2 H N N 370 MET HG3 H N N 371 MET HE1 H N N 372 MET HE2 H N N 373 MET HE3 H N N 374 MET HXT H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 PRO N N N N 399 PRO CA C N S 400 PRO C C N N 401 PRO O O N N 402 PRO CB C N N 403 PRO CG C N N 404 PRO CD C N N 405 PRO OXT O N N 406 PRO H H N N 407 PRO HA H N N 408 PRO HB2 H N N 409 PRO HB3 H N N 410 PRO HG2 H N N 411 PRO HG3 H N N 412 PRO HD2 H N N 413 PRO HD3 H N N 414 PRO HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TYR N N N N 447 TYR CA C N S 448 TYR C C N N 449 TYR O O N N 450 TYR CB C N N 451 TYR CG C Y N 452 TYR CD1 C Y N 453 TYR CD2 C Y N 454 TYR CE1 C Y N 455 TYR CE2 C Y N 456 TYR CZ C Y N 457 TYR OH O N N 458 TYR OXT O N N 459 TYR H H N N 460 TYR H2 H N N 461 TYR HA H N N 462 TYR HB2 H N N 463 TYR HB3 H N N 464 TYR HD1 H N N 465 TYR HD2 H N N 466 TYR HE1 H N N 467 TYR HE2 H N N 468 TYR HH H N N 469 TYR HXT H N N 470 VAL N N N N 471 VAL CA C N S 472 VAL C C N N 473 VAL O O N N 474 VAL CB C N N 475 VAL CG1 C N N 476 VAL CG2 C N N 477 VAL OXT O N N 478 VAL H H N N 479 VAL H2 H N N 480 VAL HA H N N 481 VAL HB H N N 482 VAL HG11 H N N 483 VAL HG12 H N N 484 VAL HG13 H N N 485 VAL HG21 H N N 486 VAL HG22 H N N 487 VAL HG23 H N N 488 VAL HXT H N N 489 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 SER N CA sing N N 411 SER N H sing N N 412 SER N H2 sing N N 413 SER CA C sing N N 414 SER CA CB sing N N 415 SER CA HA sing N N 416 SER C O doub N N 417 SER C OXT sing N N 418 SER CB OG sing N N 419 SER CB HB2 sing N N 420 SER CB HB3 sing N N 421 SER OG HG sing N N 422 SER OXT HXT sing N N 423 THR N CA sing N N 424 THR N H sing N N 425 THR N H2 sing N N 426 THR CA C sing N N 427 THR CA CB sing N N 428 THR CA HA sing N N 429 THR C O doub N N 430 THR C OXT sing N N 431 THR CB OG1 sing N N 432 THR CB CG2 sing N N 433 THR CB HB sing N N 434 THR OG1 HG1 sing N N 435 THR CG2 HG21 sing N N 436 THR CG2 HG22 sing N N 437 THR CG2 HG23 sing N N 438 THR OXT HXT sing N N 439 TYR N CA sing N N 440 TYR N H sing N N 441 TYR N H2 sing N N 442 TYR CA C sing N N 443 TYR CA CB sing N N 444 TYR CA HA sing N N 445 TYR C O doub N N 446 TYR C OXT sing N N 447 TYR CB CG sing N N 448 TYR CB HB2 sing N N 449 TYR CB HB3 sing N N 450 TYR CG CD1 doub Y N 451 TYR CG CD2 sing Y N 452 TYR CD1 CE1 sing Y N 453 TYR CD1 HD1 sing N N 454 TYR CD2 CE2 doub Y N 455 TYR CD2 HD2 sing N N 456 TYR CE1 CZ doub Y N 457 TYR CE1 HE1 sing N N 458 TYR CE2 CZ sing Y N 459 TYR CE2 HE2 sing N N 460 TYR CZ OH sing N N 461 TYR OH HH sing N N 462 TYR OXT HXT sing N N 463 VAL N CA sing N N 464 VAL N H sing N N 465 VAL N H2 sing N N 466 VAL CA C sing N N 467 VAL CA CB sing N N 468 VAL CA HA sing N N 469 VAL C O doub N N 470 VAL C OXT sing N N 471 VAL CB CG1 sing N N 472 VAL CB CG2 sing N N 473 VAL CB HB sing N N 474 VAL CG1 HG11 sing N N 475 VAL CG1 HG12 sing N N 476 VAL CG1 HG13 sing N N 477 VAL CG2 HG21 sing N N 478 VAL CG2 HG22 sing N N 479 VAL CG2 HG23 sing N N 480 VAL OXT HXT sing N N 481 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1ZLK 'double helix' 1ZLK 'b-form double helix' 1ZLK 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 10 1_555 B DA 32 1_555 -0.258 0.181 0.038 16.952 -7.473 13.257 1 C_DT10:DA31_D C 10 ? D 31 ? ? 1 1 A DT 11 1_555 B DA 31 1_555 -0.478 0.260 -0.122 15.313 -10.556 2.220 2 C_DT11:DA30_D C 11 ? D 30 ? 20 1 1 A DG 14 1_555 B DC 28 1_555 -0.376 0.195 -0.415 2.102 -4.723 0.037 3 C_DG14:DC27_D C 14 ? D 27 ? 19 1 1 A DG 15 1_555 B DC 27 1_555 0.185 -0.168 -1.101 -18.187 -3.296 -10.467 4 C_DG15:DC26_D C 15 ? D 26 ? 19 1 1 A DG 16 1_555 B DC 26 1_555 -0.222 -0.594 -1.797 -26.486 -17.869 -6.386 5 C_DG16:DC25_D C 16 ? D 25 ? 19 1 1 A DA 17 1_555 B DT 25 1_555 0.345 -0.302 -1.157 -15.398 -10.302 1.586 6 C_DA17:DT24_D C 17 ? D 24 ? 20 1 1 A DC 18 1_555 B DG 24 1_555 -0.311 -0.208 -0.995 29.601 -15.438 2.531 7 C_DC18:DG23_D C 18 ? D 23 ? 19 1 1 A DT 19 1_555 B DA 23 1_555 -0.251 0.057 -0.880 28.207 -25.627 2.388 8 C_DT19:DA22_D C 19 ? D 22 ? 20 1 1 A DA 20 1_555 B DT 22 1_555 0.925 -0.188 -0.033 6.451 -20.138 -0.105 9 C_DA20:DT21_D C 20 ? D 21 ? 20 1 1 A DA 21 1_555 B DT 21 1_555 0.193 -0.391 0.121 2.345 -21.287 -1.117 10 C_DA21:DT20_D C 21 ? D 20 ? 20 1 1 A DA 22 1_555 B DT 20 1_555 0.111 0.301 -0.498 -17.087 -18.520 10.524 11 C_DA22:DT19_D C 22 ? D 19 ? ? ? 1 A DG 23 1_555 B DC 19 1_555 0.151 -0.159 -1.373 -25.384 -6.584 5.231 12 C_DG23:DC18_D C 23 ? D 18 ? 19 1 1 A DT 24 1_555 B DA 18 1_555 -0.605 -0.424 -0.938 2.421 -8.084 0.550 13 C_DT24:DA17_D C 24 ? D 17 ? 20 1 1 A DC 25 1_555 B DG 17 1_555 0.218 -0.611 -1.232 16.047 -17.485 -2.820 14 C_DC25:DG16_D C 25 ? D 16 ? 19 1 1 A DC 26 1_555 B DG 16 1_555 -0.372 -0.294 -0.374 9.413 -4.928 -8.686 15 C_DC26:DG15_D C 26 ? D 15 ? 19 1 1 A DC 27 1_555 B DG 15 1_555 0.280 0.153 0.104 -7.657 -1.057 1.553 16 C_DC27:DG14_D C 27 ? D 14 ? 19 1 1 A DT 28 1_555 B DA 14 1_555 0.354 0.056 0.478 4.675 -0.774 -0.847 17 C_DT28:DA13_D C 28 ? D 13 ? 20 1 1 A DA 29 1_555 B DT 13 1_555 0.494 0.337 -0.469 11.365 -10.383 4.794 18 C_DA29:DT12_D C 29 ? D 12 ? ? ? 1 A DA 30 1_555 B DT 12 1_555 0.835 0.085 -0.357 -3.558 -12.036 3.646 19 C_DA30:DT11_D C 30 ? D 11 ? 20 1 1 A DC 31 1_555 B DG 11 1_555 0.969 -0.586 -0.470 7.034 -14.293 -2.470 20 C_DC31:DG10_D C 31 ? D 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 10 1_555 B DA 32 1_555 A DT 11 1_555 B DA 31 1_555 0.213 0.005 3.132 4.876 2.871 33.634 -0.431 0.383 3.121 4.919 -8.353 34.094 1 CC_DT10DT11:DA30DA31_DD C 10 ? D 31 ? C 11 ? D 30 ? 1 A DG 14 1_555 B DC 28 1_555 A DG 15 1_555 B DC 27 1_555 -1.772 -0.185 3.504 -4.114 16.061 39.108 -2.048 1.993 3.345 22.788 5.838 42.351 2 CC_DG14DG15:DC26DC27_DD C 14 ? D 27 ? C 15 ? D 26 ? 1 A DG 15 1_555 B DC 27 1_555 A DG 16 1_555 B DC 26 1_555 -1.092 -0.024 3.668 0.597 8.448 26.023 -2.396 2.475 3.463 18.159 -1.282 27.344 3 CC_DG15DG16:DC25DC26_DD C 15 ? D 26 ? C 16 ? D 25 ? 1 A DG 16 1_555 B DC 26 1_555 A DA 17 1_555 B DT 25 1_555 0.346 0.749 3.308 -9.394 9.421 24.057 -0.831 -3.134 3.043 20.701 20.640 27.443 4 CC_DG16DA17:DT24DC25_DD C 16 ? D 25 ? C 17 ? D 24 ? 1 A DA 17 1_555 B DT 25 1_555 A DC 18 1_555 B DG 24 1_555 1.012 -0.212 2.341 2.008 -5.430 23.229 0.788 -1.960 2.404 -13.223 -4.889 23.930 5 CC_DA17DC18:DG23DT24_DD C 17 ? D 24 ? C 18 ? D 23 ? 1 A DC 18 1_555 B DG 24 1_555 A DT 19 1_555 B DA 23 1_555 -0.381 0.385 3.273 4.608 8.493 37.067 -0.488 1.164 3.212 13.089 -7.102 38.263 6 CC_DC18DT19:DA22DG23_DD C 18 ? D 23 ? C 19 ? D 22 ? 1 A DT 19 1_555 B DA 23 1_555 A DA 20 1_555 B DT 22 1_555 0.629 -0.405 4.004 -1.214 2.736 36.528 -1.101 -1.204 3.942 4.356 1.933 36.646 7 CC_DT19DA20:DT21DA22_DD C 19 ? D 22 ? C 20 ? D 21 ? 1 A DA 20 1_555 B DT 22 1_555 A DA 21 1_555 B DT 21 1_555 0.181 -0.246 3.209 2.109 -1.892 33.942 -0.124 0.021 3.222 -3.234 -3.605 34.057 8 CC_DA20DA21:DT20DT21_DD C 20 ? D 21 ? C 21 ? D 20 ? 1 A DA 21 1_555 B DT 21 1_555 A DA 22 1_555 B DT 20 1_555 0.353 -0.723 3.689 3.779 9.650 35.546 -2.579 0.007 3.403 15.407 -6.034 36.979 9 CC_DA21DA22:DT19DT20_DD C 21 ? D 20 ? C 22 ? D 19 ? 1 A DA 22 1_555 B DT 20 1_555 A DG 23 1_555 B DC 19 1_555 0.118 0.307 3.606 -1.643 8.920 36.323 -0.829 -0.426 3.572 14.041 2.587 37.401 10 CC_DA22DG23:DC18DT19_DD C 22 ? D 19 ? C 23 ? D 18 ? 1 A DG 23 1_555 B DC 19 1_555 A DT 24 1_555 B DA 18 1_555 -1.201 -0.373 2.619 -3.671 0.272 23.037 -0.999 1.930 2.769 0.676 9.116 23.325 11 CC_DG23DT24:DA17DC18_DD C 23 ? D 18 ? C 24 ? D 17 ? 1 A DT 24 1_555 B DA 18 1_555 A DC 25 1_555 B DG 17 1_555 -0.465 0.553 3.148 5.648 9.207 26.185 -0.957 2.232 3.004 19.309 -11.845 28.289 12 CC_DT24DC25:DG16DA17_DD C 24 ? D 17 ? C 25 ? D 16 ? 1 A DC 25 1_555 B DG 17 1_555 A DC 26 1_555 B DG 16 1_555 0.575 -0.279 3.714 -5.432 6.315 27.164 -2.184 -2.561 3.388 13.061 11.234 28.390 13 CC_DC25DC26:DG15DG16_DD C 25 ? D 16 ? C 26 ? D 15 ? 1 A DC 26 1_555 B DG 16 1_555 A DC 27 1_555 B DG 15 1_555 1.729 -0.336 3.636 2.670 7.246 39.687 -1.399 -2.168 3.626 10.552 -3.888 40.401 14 CC_DC26DC27:DG14DG15_DD C 26 ? D 15 ? C 27 ? D 14 ? 1 A DC 27 1_555 B DG 15 1_555 A DT 28 1_555 B DA 14 1_555 -0.546 -1.032 3.026 -3.204 3.735 30.542 -2.596 0.457 2.923 7.033 6.033 30.927 15 CC_DC27DT28:DA13DG14_DD C 27 ? D 14 ? C 28 ? D 13 ? 1 A DT 28 1_555 B DA 14 1_555 A DA 29 1_555 B DT 13 1_555 -0.275 -0.470 3.273 7.567 5.710 33.194 -1.662 1.618 3.020 9.751 -12.921 34.485 16 CC_DT28DA29:DT12DA13_DD C 28 ? D 13 ? C 29 ? D 12 ? 1 A DA 29 1_555 B DT 13 1_555 A DA 30 1_555 B DT 12 1_555 -0.800 -0.150 3.720 -6.417 9.088 37.522 -1.487 0.304 3.670 13.762 9.718 39.079 17 CC_DA29DA30:DT11DT12_DD C 29 ? D 12 ? C 30 ? D 11 ? 1 A DA 30 1_555 B DT 12 1_555 A DC 31 1_555 B DG 11 1_555 -0.365 0.010 2.793 -1.154 1.262 34.578 -0.149 0.461 2.802 2.122 1.940 34.619 18 CC_DA30DC31:DG10DT11_DD C 30 ? D 11 ? C 31 ? D 10 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZLJ _pdbx_initial_refinement_model.details 'pdb entry 1ZLJ' #