HEADER OXIDOREDUCTASE 14-MAY-05 1ZOV TITLE CRYSTAL STRUCTURE OF MONOMERIC SARCOSINE OXIDASE FROM BACILLUS SP. NS- TITLE 2 129 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOMERIC SARCOSINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MSOX; COMPND 5 EC: 1.5.3.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SP.; SOURCE 3 ORGANISM_TAXID: 1419; SOURCE 4 STRAIN: NS-129 KEYWDS FLAVOPROTEIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.NAGATA,H.SASAKI,J.OHTSUKA,M.HUA,M.OKAI,K.KUBOTA,M.KAMO,K.ITO, AUTHOR 2 T.ICHIKAWA,Y.KOYAMA,M.TANOKURA REVDAT 5 23-OCT-24 1ZOV 1 REMARK REVDAT 4 25-OCT-23 1ZOV 1 REMARK LINK REVDAT 3 13-JUL-11 1ZOV 1 VERSN REVDAT 2 24-FEB-09 1ZOV 1 VERSN REVDAT 1 23-MAY-06 1ZOV 0 JRNL AUTH K.NAGATA,H.SASAKI,M.HUA,M.OKAI,K.KUBOTA,M.KAMO,K.ITO, JRNL AUTH 2 T.ICHIKAWA,Y.KOYAMA,M.TANOKURA JRNL TITL CRYSTAL STRUCTURE OF MONOMERIC SARCOSINE OXIDASE FROM JRNL TITL 2 BACILLUS SP. NS-129 REVEALS MULTIPLE CONFORMATIONS AT THE JRNL TITL 3 ACTIVE-SITE LOOP JRNL REF PROC.JPN.ACAD.,SER.B V. 81 220 2005 JRNL REFN ISSN 0386-2208 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 83295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4408 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5538 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 315 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5940 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 484 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.722 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6216 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 5312 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8454 ; 1.338 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12392 ; 0.821 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 759 ; 6.636 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 895 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6985 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1279 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1061 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6257 ; 0.250 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3312 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 337 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.092 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 29 ; 0.238 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.193 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3763 ; 0.884 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6030 ; 1.554 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2453 ; 2.172 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2424 ; 3.486 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6216 ; 1.200 ; 2.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 486 ; 2.924 ; 2.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6046 ; 1.467 ; 2.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZOV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000032968. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLECRYSTAL REMARK 200 MONOCHROMATOR USING SI(111) REMARK 200 CRYSTALS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101469 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1L9F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL BUFFER (PH 8.5), 2.0M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.22750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 85.52100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 85.52100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.11375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 85.52100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 85.52100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.34125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 85.52100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 85.52100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.11375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 85.52100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 85.52100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.34125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 36.22750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 382 REMARK 465 GLU A 383 REMARK 465 ALA A 384 REMARK 465 VAL A 385 REMARK 465 LYS A 386 REMARK 465 SER B 1 REMARK 465 LYS B 382 REMARK 465 GLU B 383 REMARK 465 ALA B 384 REMARK 465 VAL B 385 REMARK 465 LYS B 386 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 LYS A 381 CG CD CE NZ REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 LYS B 381 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 33 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 134 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 276 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP B 47 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP B 181 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 213 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 276 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 322 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 377 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 377 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 11 53.66 -103.38 REMARK 500 PHE A 35 -150.57 -126.34 REMARK 500 ASP A 47 -44.74 74.71 REMARK 500 LYS A 189 34.07 -97.35 REMARK 500 SER A 200 66.16 -152.13 REMARK 500 VAL A 248 -166.02 -121.41 REMARK 500 HIS A 345 27.44 -141.19 REMARK 500 ALA B 11 52.04 -104.30 REMARK 500 PHE B 35 -150.05 -130.17 REMARK 500 ASP B 47 -46.12 76.26 REMARK 500 HIS B 53 -60.24 -103.88 REMARK 500 SER B 200 70.06 -151.31 REMARK 500 VAL B 248 -167.67 -124.92 REMARK 500 ASN B 306 46.65 -97.61 REMARK 500 HIS B 345 27.96 -141.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 2403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 1400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 2400 DBREF 1ZOV A 1 386 UNP P23342 MSOX_BACSN 2 387 DBREF 1ZOV B 1 386 UNP P23342 MSOX_BACSN 2 387 SEQRES 1 A 386 SER THR HIS PHE ASP VAL ILE VAL VAL GLY ALA GLY SER SEQRES 2 A 386 MET GLY MET ALA ALA GLY TYR TYR LEU ALA LYS GLN GLY SEQRES 3 A 386 VAL LYS THR LEU LEU VAL ASP SER PHE ASP PRO PRO HIS SEQRES 4 A 386 THR ASN GLY SER HIS HIS GLY ASP THR ARG ILE ILE ARG SEQRES 5 A 386 HIS ALA TYR GLY GLU GLY ARG GLU TYR VAL PRO PHE ALA SEQRES 6 A 386 LEU ARG ALA GLN GLU LEU TRP TYR GLU LEU GLU LYS GLU SEQRES 7 A 386 THR HIS HIS LYS ILE PHE THR GLN THR GLY VAL LEU VAL SEQRES 8 A 386 TYR GLY PRO LYS GLY GLY SER ALA PHE VAL SER GLU THR SEQRES 9 A 386 MET GLU ALA ALA ASN ILE HIS SER LEU GLU HIS GLU LEU SEQRES 10 A 386 PHE GLU GLY LYS GLN LEU THR ASP ARG TRP ALA GLY VAL SEQRES 11 A 386 GLU VAL PRO ASP ASN TYR GLU ALA ILE PHE GLU PRO ASN SEQRES 12 A 386 SER GLY VAL LEU PHE SER GLU ASN CYS ILE GLN ALA TYR SEQRES 13 A 386 ARG GLU LEU ALA GLU ALA HIS GLY ALA THR VAL LEU THR SEQRES 14 A 386 TYR THR PRO VAL GLU ASP PHE GLU VAL THR GLU ASP LEU SEQRES 15 A 386 VAL THR ILE LYS THR ALA LYS GLY SER TYR THR ALA ASN SEQRES 16 A 386 LYS LEU VAL VAL SER MET GLY ALA TRP ASN SER LYS LEU SEQRES 17 A 386 LEU SER LYS LEU ASP VAL GLU ILE PRO LEU GLN PRO TYR SEQRES 18 A 386 ARG GLN VAL VAL GLY PHE PHE GLU CYS ASP GLU ALA LYS SEQRES 19 A 386 TYR SER ASN ASN ALA HIS TYR PRO ALA PHE MET VAL GLU SEQRES 20 A 386 VAL GLU ASN GLY ILE TYR TYR GLY PHE PRO SER PHE GLY SEQRES 21 A 386 GLY SER GLY LEU LYS ILE GLY TYR HIS SER TYR GLY GLN SEQRES 22 A 386 GLN ILE ASP PRO ASP THR ILE ASN ARG GLU PHE GLY ALA SEQRES 23 A 386 TYR PRO GLU ASP GLU ALA ASN LEU ARG LYS PHE LEU GLU SEQRES 24 A 386 GLN TYR MET PRO GLY ALA ASN GLY GLU LEU LYS LYS GLY SEQRES 25 A 386 ALA VAL CYS MET TYR THR LYS THR PRO ASP GLU HIS PHE SEQRES 26 A 386 VAL ILE ASP LEU HIS PRO LYS TYR SER ASN VAL ALA ILE SEQRES 27 A 386 ALA ALA GLY PHE SER GLY HIS GLY PHE LYS PHE SER SER SEQRES 28 A 386 VAL VAL GLY GLU THR LEU ALA GLN LEU ALA THR THR GLY SEQRES 29 A 386 LYS THR GLU HIS ASP ILE SER ILE PHE SER LEU ASN ARG SEQRES 30 A 386 ASP ALA LEU LYS LYS GLU ALA VAL LYS SEQRES 1 B 386 SER THR HIS PHE ASP VAL ILE VAL VAL GLY ALA GLY SER SEQRES 2 B 386 MET GLY MET ALA ALA GLY TYR TYR LEU ALA LYS GLN GLY SEQRES 3 B 386 VAL LYS THR LEU LEU VAL ASP SER PHE ASP PRO PRO HIS SEQRES 4 B 386 THR ASN GLY SER HIS HIS GLY ASP THR ARG ILE ILE ARG SEQRES 5 B 386 HIS ALA TYR GLY GLU GLY ARG GLU TYR VAL PRO PHE ALA SEQRES 6 B 386 LEU ARG ALA GLN GLU LEU TRP TYR GLU LEU GLU LYS GLU SEQRES 7 B 386 THR HIS HIS LYS ILE PHE THR GLN THR GLY VAL LEU VAL SEQRES 8 B 386 TYR GLY PRO LYS GLY GLY SER ALA PHE VAL SER GLU THR SEQRES 9 B 386 MET GLU ALA ALA ASN ILE HIS SER LEU GLU HIS GLU LEU SEQRES 10 B 386 PHE GLU GLY LYS GLN LEU THR ASP ARG TRP ALA GLY VAL SEQRES 11 B 386 GLU VAL PRO ASP ASN TYR GLU ALA ILE PHE GLU PRO ASN SEQRES 12 B 386 SER GLY VAL LEU PHE SER GLU ASN CYS ILE GLN ALA TYR SEQRES 13 B 386 ARG GLU LEU ALA GLU ALA HIS GLY ALA THR VAL LEU THR SEQRES 14 B 386 TYR THR PRO VAL GLU ASP PHE GLU VAL THR GLU ASP LEU SEQRES 15 B 386 VAL THR ILE LYS THR ALA LYS GLY SER TYR THR ALA ASN SEQRES 16 B 386 LYS LEU VAL VAL SER MET GLY ALA TRP ASN SER LYS LEU SEQRES 17 B 386 LEU SER LYS LEU ASP VAL GLU ILE PRO LEU GLN PRO TYR SEQRES 18 B 386 ARG GLN VAL VAL GLY PHE PHE GLU CYS ASP GLU ALA LYS SEQRES 19 B 386 TYR SER ASN ASN ALA HIS TYR PRO ALA PHE MET VAL GLU SEQRES 20 B 386 VAL GLU ASN GLY ILE TYR TYR GLY PHE PRO SER PHE GLY SEQRES 21 B 386 GLY SER GLY LEU LYS ILE GLY TYR HIS SER TYR GLY GLN SEQRES 22 B 386 GLN ILE ASP PRO ASP THR ILE ASN ARG GLU PHE GLY ALA SEQRES 23 B 386 TYR PRO GLU ASP GLU ALA ASN LEU ARG LYS PHE LEU GLU SEQRES 24 B 386 GLN TYR MET PRO GLY ALA ASN GLY GLU LEU LYS LYS GLY SEQRES 25 B 386 ALA VAL CYS MET TYR THR LYS THR PRO ASP GLU HIS PHE SEQRES 26 B 386 VAL ILE ASP LEU HIS PRO LYS TYR SER ASN VAL ALA ILE SEQRES 27 B 386 ALA ALA GLY PHE SER GLY HIS GLY PHE LYS PHE SER SER SEQRES 28 B 386 VAL VAL GLY GLU THR LEU ALA GLN LEU ALA THR THR GLY SEQRES 29 B 386 LYS THR GLU HIS ASP ILE SER ILE PHE SER LEU ASN ARG SEQRES 30 B 386 ASP ALA LEU LYS LYS GLU ALA VAL LYS HET CL A1403 1 HET FAD A1400 53 HET CL B2403 1 HET FAD B2400 53 HETNAM CL CHLORIDE ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 3 CL 2(CL 1-) FORMUL 4 FAD 2(C27 H33 N9 O15 P2) FORMUL 7 HOH *484(H2 O) HELIX 1 1 GLY A 12 LYS A 24 1 13 HELIX 2 2 GLU A 60 THR A 79 1 20 HELIX 3 3 SER A 98 HIS A 111 1 14 HELIX 4 4 GLY A 120 TRP A 127 1 8 HELIX 5 5 SER A 149 HIS A 163 1 15 HELIX 6 6 MET A 201 ALA A 203 5 3 HELIX 7 7 TRP A 204 LEU A 209 1 6 HELIX 8 8 SER A 210 ASP A 213 5 4 HELIX 9 9 ASP A 231 SER A 236 1 6 HELIX 10 10 ASN A 237 HIS A 240 5 4 HELIX 11 11 PRO A 288 MET A 302 1 15 HELIX 12 12 PRO A 303 ASN A 306 5 4 HELIX 13 13 GLY A 346 LYS A 348 5 3 HELIX 14 14 PHE A 349 GLY A 364 1 16 HELIX 15 15 ILE A 370 SER A 374 5 5 HELIX 16 16 ARG A 377 LYS A 381 5 5 HELIX 17 17 GLY B 12 LYS B 24 1 13 HELIX 18 18 GLY B 58 GLU B 60 5 3 HELIX 19 19 TYR B 61 THR B 79 1 19 HELIX 20 20 SER B 98 HIS B 111 1 14 HELIX 21 21 GLY B 120 TRP B 127 1 8 HELIX 22 22 SER B 149 HIS B 163 1 15 HELIX 23 23 MET B 201 ALA B 203 5 3 HELIX 24 24 TRP B 204 LEU B 209 1 6 HELIX 25 25 SER B 210 ASP B 213 5 4 HELIX 26 26 ASP B 231 SER B 236 1 6 HELIX 27 27 ASN B 237 HIS B 240 5 4 HELIX 28 28 PRO B 288 MET B 302 1 15 HELIX 29 29 PRO B 303 ASN B 306 5 4 HELIX 30 30 GLY B 346 LYS B 348 5 3 HELIX 31 31 PHE B 349 GLY B 364 1 16 HELIX 32 32 ILE B 370 SER B 374 5 5 HELIX 33 33 ARG B 377 LYS B 381 5 5 SHEET 1 A 6 THR A 166 LEU A 168 0 SHEET 2 A 6 THR A 29 VAL A 32 1 N LEU A 31 O LEU A 168 SHEET 3 A 6 HIS A 3 VAL A 9 1 N VAL A 8 O LEU A 30 SHEET 4 A 6 GLY A 190 VAL A 199 1 O VAL A 198 N VAL A 9 SHEET 5 A 6 VAL A 183 THR A 187 -1 N VAL A 183 O ALA A 194 SHEET 6 A 6 VAL A 173 VAL A 178 -1 N GLU A 174 O LYS A 186 SHEET 1 B 6 THR A 166 LEU A 168 0 SHEET 2 B 6 THR A 29 VAL A 32 1 N LEU A 31 O LEU A 168 SHEET 3 B 6 HIS A 3 VAL A 9 1 N VAL A 8 O LEU A 30 SHEET 4 B 6 GLY A 190 VAL A 199 1 O VAL A 198 N VAL A 9 SHEET 5 B 6 VAL A 336 ALA A 340 1 O ALA A 337 N VAL A 199 SHEET 6 B 6 VAL A 326 LEU A 329 -1 N ASP A 328 O ILE A 338 SHEET 1 C 3 THR A 48 ILE A 51 0 SHEET 2 C 3 GLY A 145 PHE A 148 -1 O LEU A 147 N ARG A 49 SHEET 3 C 3 PHE A 84 THR A 85 -1 N THR A 85 O VAL A 146 SHEET 1 D 8 GLU A 116 GLU A 119 0 SHEET 2 D 8 TYR A 136 GLU A 141 -1 O PHE A 140 N GLU A 116 SHEET 3 D 8 VAL A 89 PRO A 94 -1 N VAL A 91 O ILE A 139 SHEET 4 D 8 ALA A 243 VAL A 248 1 O ALA A 243 N LEU A 90 SHEET 5 D 8 GLY A 251 PHE A 256 -1 O GLY A 251 N VAL A 248 SHEET 6 D 8 LEU A 264 TYR A 268 -1 O GLY A 267 N TYR A 254 SHEET 7 D 8 GLN A 219 PHE A 228 -1 N PHE A 228 O LEU A 264 SHEET 8 D 8 GLN A 273 GLN A 274 -1 O GLN A 273 N ARG A 222 SHEET 1 E 8 GLU A 116 GLU A 119 0 SHEET 2 E 8 TYR A 136 GLU A 141 -1 O PHE A 140 N GLU A 116 SHEET 3 E 8 VAL A 89 PRO A 94 -1 N VAL A 91 O ILE A 139 SHEET 4 E 8 ALA A 243 VAL A 248 1 O ALA A 243 N LEU A 90 SHEET 5 E 8 GLY A 251 PHE A 256 -1 O GLY A 251 N VAL A 248 SHEET 6 E 8 LEU A 264 TYR A 268 -1 O GLY A 267 N TYR A 254 SHEET 7 E 8 GLN A 219 PHE A 228 -1 N PHE A 228 O LEU A 264 SHEET 8 E 8 LEU A 309 LYS A 319 -1 O LYS A 311 N PHE A 227 SHEET 1 F 6 THR B 166 LEU B 168 0 SHEET 2 F 6 THR B 29 VAL B 32 1 N LEU B 31 O THR B 166 SHEET 3 F 6 HIS B 3 VAL B 9 1 N VAL B 8 O LEU B 30 SHEET 4 F 6 GLY B 190 VAL B 199 1 O VAL B 198 N VAL B 9 SHEET 5 F 6 VAL B 183 THR B 187 -1 N VAL B 183 O ALA B 194 SHEET 6 F 6 VAL B 173 VAL B 178 -1 N GLU B 174 O LYS B 186 SHEET 1 G 6 THR B 166 LEU B 168 0 SHEET 2 G 6 THR B 29 VAL B 32 1 N LEU B 31 O THR B 166 SHEET 3 G 6 HIS B 3 VAL B 9 1 N VAL B 8 O LEU B 30 SHEET 4 G 6 GLY B 190 VAL B 199 1 O VAL B 198 N VAL B 9 SHEET 5 G 6 VAL B 336 ALA B 340 1 O ALA B 337 N VAL B 199 SHEET 6 G 6 VAL B 326 LEU B 329 -1 N ASP B 328 O ILE B 338 SHEET 1 H 3 THR B 48 ILE B 51 0 SHEET 2 H 3 GLY B 145 PHE B 148 -1 O LEU B 147 N ARG B 49 SHEET 3 H 3 PHE B 84 THR B 85 -1 N THR B 85 O VAL B 146 SHEET 1 I 8 GLU B 116 GLU B 119 0 SHEET 2 I 8 TYR B 136 GLU B 141 -1 O PHE B 140 N GLU B 116 SHEET 3 I 8 VAL B 89 PRO B 94 -1 N VAL B 91 O ILE B 139 SHEET 4 I 8 ALA B 243 VAL B 248 1 O GLU B 247 N TYR B 92 SHEET 5 I 8 GLY B 251 PHE B 256 -1 O GLY B 251 N VAL B 248 SHEET 6 I 8 LEU B 264 TYR B 268 -1 O GLY B 267 N TYR B 254 SHEET 7 I 8 GLN B 219 PHE B 228 -1 N PHE B 228 O LEU B 264 SHEET 8 I 8 GLN B 273 GLN B 274 -1 O GLN B 273 N ARG B 222 SHEET 1 J 8 GLU B 116 GLU B 119 0 SHEET 2 J 8 TYR B 136 GLU B 141 -1 O PHE B 140 N GLU B 116 SHEET 3 J 8 VAL B 89 PRO B 94 -1 N VAL B 91 O ILE B 139 SHEET 4 J 8 ALA B 243 VAL B 248 1 O GLU B 247 N TYR B 92 SHEET 5 J 8 GLY B 251 PHE B 256 -1 O GLY B 251 N VAL B 248 SHEET 6 J 8 LEU B 264 TYR B 268 -1 O GLY B 267 N TYR B 254 SHEET 7 J 8 GLN B 219 PHE B 228 -1 N PHE B 228 O LEU B 264 SHEET 8 J 8 LEU B 309 LYS B 319 -1 O LYS B 310 N PHE B 227 LINK SG CYS A 315 C8M FAD A1400 1555 1555 1.77 LINK SG CYS B 315 C8M FAD B2400 1555 1555 1.75 CISPEP 1 PRO A 37 PRO A 38 0 -2.27 CISPEP 2 PRO B 37 PRO B 38 0 -0.55 SITE 1 AC1 7 TYR A 317 THR A 318 PHE A 342 SER A 343 SITE 2 AC1 7 GLY A 344 FAD A1400 HOH A1424 SITE 1 AC2 6 TYR B 317 THR B 318 SER B 343 GLY B 344 SITE 2 AC2 6 FAD B2400 HOH B2431 SITE 1 AC3 38 GLY A 10 GLY A 12 SER A 13 MET A 14 SITE 2 AC3 38 VAL A 32 ASP A 33 SER A 34 PHE A 35 SITE 3 AC3 38 HIS A 39 GLY A 42 SER A 43 HIS A 44 SITE 4 AC3 38 ARG A 49 ILE A 50 PRO A 172 VAL A 173 SITE 5 AC3 38 SER A 200 MET A 201 GLY A 202 TRP A 204 SITE 6 AC3 38 LEU A 208 TYR A 254 CYS A 315 MET A 316 SITE 7 AC3 38 TYR A 317 PHE A 342 GLY A 344 HIS A 345 SITE 8 AC3 38 GLY A 346 PHE A 347 LYS A 348 CL A1403 SITE 9 AC3 38 HOH A1405 HOH A1412 HOH A1413 HOH A1415 SITE 10 AC3 38 HOH A1442 HOH A1616 SITE 1 AC4 38 GLY B 10 GLY B 12 SER B 13 MET B 14 SITE 2 AC4 38 VAL B 32 ASP B 33 SER B 34 PHE B 35 SITE 3 AC4 38 HIS B 39 GLY B 42 SER B 43 HIS B 44 SITE 4 AC4 38 ARG B 49 ILE B 50 PRO B 172 VAL B 173 SITE 5 AC4 38 SER B 200 MET B 201 GLY B 202 TRP B 204 SITE 6 AC4 38 LEU B 208 TYR B 254 CYS B 315 MET B 316 SITE 7 AC4 38 TYR B 317 PHE B 342 GLY B 344 HIS B 345 SITE 8 AC4 38 GLY B 346 PHE B 347 LYS B 348 CL B2403 SITE 9 AC4 38 HOH B2404 HOH B2405 HOH B2411 HOH B2420 SITE 10 AC4 38 HOH B2423 HOH B2501 CRYST1 171.042 171.042 72.455 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005847 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013802 0.00000