HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-MAY-05 1ZPV TITLE ACT DOMAIN PROTEIN FROM STREPTOCOCCUS PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACT DOMAIN PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 GENE: SP0238; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ACT DOMAIN, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,C.HATZOS,J.ABDULLAH,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 13-NOV-24 1ZPV 1 SEQADV LINK REVDAT 3 13-JUL-11 1ZPV 1 VERSN REVDAT 2 24-FEB-09 1ZPV 1 VERSN REVDAT 1 28-JUN-05 1ZPV 0 JRNL AUTH J.OSIPIUK,C.HATZOS,J.ABDULLAH,F.COLLART,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF ACT DOMAIN PROTEIN FROM JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 19273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1966 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1047 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1964 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.31000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 1.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.896 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2030 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2736 ; 1.412 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 5.621 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;41.742 ;26.489 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;15.436 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;20.457 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1473 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 984 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1464 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 166 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 63 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.162 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1273 ; 0.954 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2063 ; 1.756 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 764 ; 3.047 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 673 ; 4.774 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 83 REMARK 3 ORIGIN FOR THE GROUP (A): 34.3241 29.2906 0.3632 REMARK 3 T TENSOR REMARK 3 T11: -0.0265 T22: -0.0335 REMARK 3 T33: -0.0275 T12: 0.0030 REMARK 3 T13: 0.0050 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.7352 L22: 0.9490 REMARK 3 L33: 0.8050 L12: 0.4009 REMARK 3 L13: 0.4698 L23: 0.1538 REMARK 3 S TENSOR REMARK 3 S11: 0.0941 S12: 0.0279 S13: 0.0569 REMARK 3 S21: 0.0724 S22: -0.0781 S23: 0.1175 REMARK 3 S31: 0.0121 S32: 0.0317 S33: -0.0160 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): 45.3461 10.5617 -0.4073 REMARK 3 T TENSOR REMARK 3 T11: -0.0543 T22: -0.0193 REMARK 3 T33: -0.0185 T12: 0.0195 REMARK 3 T13: 0.0092 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.0447 L22: 2.3846 REMARK 3 L33: 1.2640 L12: 0.3230 REMARK 3 L13: -0.5387 L23: -0.6438 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: -0.0568 S13: -0.0465 REMARK 3 S21: -0.0814 S22: -0.1169 S23: -0.1247 REMARK 3 S31: 0.0387 S32: 0.1119 S33: 0.0916 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -2 C 86 REMARK 3 ORIGIN FOR THE GROUP (A): 43.2538 44.9149 0.5514 REMARK 3 T TENSOR REMARK 3 T11: -0.0297 T22: 0.0035 REMARK 3 T33: -0.0287 T12: -0.0077 REMARK 3 T13: -0.0163 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.7723 L22: 0.8973 REMARK 3 L33: 0.4162 L12: 0.1180 REMARK 3 L13: -0.3448 L23: 0.1427 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.0296 S13: 0.0538 REMARK 3 S21: -0.0083 S22: 0.0353 S23: 0.0611 REMARK 3 S31: 0.0122 S32: -0.0398 S33: -0.0008 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ALL DATA WERE USED IN FINAL ROUND OF REFINEMENT. R- REMARK 3 FACTOR-ALL CORRESPONDS TO DEPOSITED FILE. R-WORK AND R-FREE REMARK 3 FACTORS ARE TAKEN FROM SECOND TO LAST ROUND OF REFINEMENT WHICH REMARK 3 USED TEST DATA SET. REMARK 4 REMARK 4 1ZPV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000033002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19284 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M HEPES, REMARK 280 25% PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.62650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.01200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.62650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.01200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 3 CHAIN(S). THE BIOLOGICAL MOLECULE REMARK 300 FOR THE PROTEIN IS NOT YET KNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 109.25300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 157 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -3 REMARK 465 ALA A 84 REMARK 465 MSE A 85 REMARK 465 TYR A 86 REMARK 465 ASN A 87 REMARK 465 ILE A 88 REMARK 465 SER B -3 REMARK 465 ASN B -2 REMARK 465 ALA B 84 REMARK 465 MSE B 85 REMARK 465 TYR B 86 REMARK 465 ASN B 87 REMARK 465 ILE B 88 REMARK 465 SER C -3 REMARK 465 ASN C 87 REMARK 465 ILE C 88 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 75 O HOH A 223 2.06 REMARK 500 NH1 ARG A 60 O HOH A 260 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 -125.65 55.56 REMARK 500 ASP B 39 -122.46 55.99 REMARK 500 ASP C 39 -125.33 50.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC80208 RELATED DB: TARGETDB DBREF 1ZPV A 1 88 UNP P67382 Y238_STRPN 1 88 DBREF 1ZPV B 1 88 UNP P67382 Y238_STRPN 1 88 DBREF 1ZPV C 1 88 UNP P67382 Y238_STRPN 1 88 SEQADV 1ZPV SER A -3 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ASN A -2 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ALA A -1 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV MSE A 1 UNP P67382 MET 1 MODIFIED RESIDUE SEQADV 1ZPV MSE A 44 UNP P67382 MET 44 MODIFIED RESIDUE SEQADV 1ZPV MSE A 45 UNP P67382 MET 45 MODIFIED RESIDUE SEQADV 1ZPV MSE A 85 UNP P67382 MET 85 MODIFIED RESIDUE SEQADV 1ZPV SER B -3 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ASN B -2 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ALA B -1 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV MSE B 1 UNP P67382 MET 1 MODIFIED RESIDUE SEQADV 1ZPV MSE B 44 UNP P67382 MET 44 MODIFIED RESIDUE SEQADV 1ZPV MSE B 45 UNP P67382 MET 45 MODIFIED RESIDUE SEQADV 1ZPV MSE B 85 UNP P67382 MET 85 MODIFIED RESIDUE SEQADV 1ZPV SER C -3 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ASN C -2 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ALA C -1 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV MSE C 1 UNP P67382 MET 1 MODIFIED RESIDUE SEQADV 1ZPV MSE C 44 UNP P67382 MET 44 MODIFIED RESIDUE SEQADV 1ZPV MSE C 45 UNP P67382 MET 45 MODIFIED RESIDUE SEQADV 1ZPV MSE C 85 UNP P67382 MET 85 MODIFIED RESIDUE SEQRES 1 A 91 SER ASN ALA MSE LYS ALA ILE ILE THR VAL VAL GLY LYS SEQRES 2 A 91 ASP LYS SER GLY ILE VAL ALA GLY VAL SER GLY LYS ILE SEQRES 3 A 91 ALA GLU LEU GLY LEU ASN ILE ASP ASP ILE SER GLN THR SEQRES 4 A 91 VAL LEU ASP GLU TYR PHE THR MSE MSE ALA VAL VAL SER SEQRES 5 A 91 SER ASP GLU LYS GLN ASP PHE THR TYR LEU ARG ASN GLU SEQRES 6 A 91 PHE GLU ALA PHE GLY GLN THR LEU ASN VAL LYS ILE ASN SEQRES 7 A 91 ILE GLN SER ALA ALA ILE PHE GLU ALA MSE TYR ASN ILE SEQRES 1 B 91 SER ASN ALA MSE LYS ALA ILE ILE THR VAL VAL GLY LYS SEQRES 2 B 91 ASP LYS SER GLY ILE VAL ALA GLY VAL SER GLY LYS ILE SEQRES 3 B 91 ALA GLU LEU GLY LEU ASN ILE ASP ASP ILE SER GLN THR SEQRES 4 B 91 VAL LEU ASP GLU TYR PHE THR MSE MSE ALA VAL VAL SER SEQRES 5 B 91 SER ASP GLU LYS GLN ASP PHE THR TYR LEU ARG ASN GLU SEQRES 6 B 91 PHE GLU ALA PHE GLY GLN THR LEU ASN VAL LYS ILE ASN SEQRES 7 B 91 ILE GLN SER ALA ALA ILE PHE GLU ALA MSE TYR ASN ILE SEQRES 1 C 91 SER ASN ALA MSE LYS ALA ILE ILE THR VAL VAL GLY LYS SEQRES 2 C 91 ASP LYS SER GLY ILE VAL ALA GLY VAL SER GLY LYS ILE SEQRES 3 C 91 ALA GLU LEU GLY LEU ASN ILE ASP ASP ILE SER GLN THR SEQRES 4 C 91 VAL LEU ASP GLU TYR PHE THR MSE MSE ALA VAL VAL SER SEQRES 5 C 91 SER ASP GLU LYS GLN ASP PHE THR TYR LEU ARG ASN GLU SEQRES 6 C 91 PHE GLU ALA PHE GLY GLN THR LEU ASN VAL LYS ILE ASN SEQRES 7 C 91 ILE GLN SER ALA ALA ILE PHE GLU ALA MSE TYR ASN ILE MODRES 1ZPV MSE A 1 MET SELENOMETHIONINE MODRES 1ZPV MSE A 44 MET SELENOMETHIONINE MODRES 1ZPV MSE A 45 MET SELENOMETHIONINE MODRES 1ZPV MSE B 1 MET SELENOMETHIONINE MODRES 1ZPV MSE B 44 MET SELENOMETHIONINE MODRES 1ZPV MSE B 45 MET SELENOMETHIONINE MODRES 1ZPV MSE C 1 MET SELENOMETHIONINE MODRES 1ZPV MSE C 44 MET SELENOMETHIONINE MODRES 1ZPV MSE C 45 MET SELENOMETHIONINE MODRES 1ZPV MSE C 85 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 44 8 HET MSE A 45 8 HET MSE B 1 8 HET MSE B 44 8 HET MSE B 45 8 HET MSE C 1 8 HET MSE C 44 8 HET MSE C 45 8 HET MSE C 85 8 HET K A 201 1 HETNAM MSE SELENOMETHIONINE HETNAM K POTASSIUM ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 4 K K 1+ FORMUL 5 HOH *191(H2 O) HELIX 1 1 GLY A 14 LEU A 26 1 13 HELIX 2 2 ASP A 55 LEU A 70 1 16 HELIX 3 3 ALA A 80 PHE A 82 5 3 HELIX 4 4 GLY B 14 LEU B 26 1 13 HELIX 5 5 ASP B 55 LEU B 70 1 16 HELIX 6 6 ALA B 80 GLU B 83 5 4 HELIX 7 7 GLY C 14 LEU C 26 1 13 HELIX 8 8 ASP C 55 LEU C 70 1 16 HELIX 9 9 ALA C 80 GLU C 83 5 4 SHEET 1 A 4 ASN A 29 LEU A 38 0 SHEET 2 A 4 TYR A 41 SER A 50 -1 O SER A 49 N ASN A 29 SHEET 3 A 4 MSE A 1 GLY A 9 -1 N ILE A 5 O ALA A 46 SHEET 4 A 4 LYS A 73 SER A 78 -1 O LYS A 73 N VAL A 8 SHEET 1 B 4 ASN B 29 LEU B 38 0 SHEET 2 B 4 TYR B 41 SER B 50 -1 O TYR B 41 N LEU B 38 SHEET 3 B 4 MSE B 1 GLY B 9 -1 N ILE B 5 O ALA B 46 SHEET 4 B 4 LYS B 73 SER B 78 -1 O LYS B 73 N VAL B 8 SHEET 1 C 4 ASN C 29 LEU C 38 0 SHEET 2 C 4 TYR C 41 SER C 50 -1 O SER C 49 N ASN C 29 SHEET 3 C 4 MSE C 1 GLY C 9 -1 N ILE C 5 O ALA C 46 SHEET 4 C 4 LYS C 73 SER C 78 -1 O LYS C 73 N VAL C 8 LINK C ALA A -1 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C THR A 43 N MSE A 44 1555 1555 1.32 LINK C MSE A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N ALA A 46 1555 1555 1.32 LINK C ALA B -1 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C THR B 43 N MSE B 44 1555 1555 1.32 LINK C MSE B 44 N MSE B 45 1555 1555 1.32 LINK C MSE B 45 N ALA B 46 1555 1555 1.33 LINK C ALA C -1 N MSE C 1 1555 1555 1.33 LINK C MSE C 1 N LYS C 2 1555 1555 1.33 LINK C THR C 43 N MSE C 44 1555 1555 1.32 LINK C MSE C 44 N MSE C 45 1555 1555 1.32 LINK C MSE C 45 N ALA C 46 1555 1555 1.34 LINK C ALA C 84 N MSE C 85 1555 1555 1.33 LINK C MSE C 85 N TYR C 86 1555 1555 1.34 CRYST1 109.253 62.024 38.006 90.00 95.08 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009153 0.000000 0.000814 0.00000 SCALE2 0.000000 0.016123 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026416 0.00000