HEADER GENE REGULATION 19-MAY-05 1ZR5 TITLE CRYSTAL STRUCTURE OF THE MACRO-DOMAIN OF HUMAN CORE HISTONE VARIANT TITLE 2 MACROH2A1.2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: H2AFY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: NON-HISTONE MACRO-DOMAIN (RESIDUES: 161-372); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS CHROMATIN, HISTONE, A1PP, MACRO-DOMAIN, P-LOOP, SPLICING, GENE KEYWDS 2 REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR G.KUSTATSCHER,M.HOTHORN,C.PUGIEUX,K.SCHEFFZEK,A.G.LADURNER REVDAT 5 23-AUG-23 1ZR5 1 SEQADV REVDAT 4 13-JUL-11 1ZR5 1 VERSN REVDAT 3 24-FEB-09 1ZR5 1 VERSN REVDAT 2 09-AUG-05 1ZR5 1 JRNL REVDAT 1 21-JUN-05 1ZR5 0 JRNL AUTH G.KUSTATSCHER,M.HOTHORN,C.PUGIEUX,K.SCHEFFZEK,A.G.LADURNER JRNL TITL SPLICING REGULATES NAD METABOLITE BINDING TO HISTONE JRNL TITL 2 MACROH2A. JRNL REF NAT.STRUCT.MOL.BIOL. V. 12 624 2005 JRNL REFN ISSN 1545-9993 JRNL PMID 15965484 JRNL DOI 10.1038/NSMB956 REMARK 2 REMARK 2 RESOLUTION. 2.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : -3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 9225 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 487 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 624 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3140 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.4300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2848 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.97000 REMARK 3 B22 (A**2) : -0.77000 REMARK 3 B33 (A**2) : -5.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.458 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.372 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 43.778 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2896 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3906 ; 1.640 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 374 ; 6.454 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 107 ;36.398 ;26.075 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 535 ;21.945 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;14.660 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 459 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2092 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1219 ; 0.242 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2018 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 66 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.331 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.167 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1887 ; 0.531 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2989 ; 0.969 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1091 ; 1.228 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 917 ; 2.125 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 179 A 367 1 REMARK 3 1 B 181 B 367 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1401 ; 0.06 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 1401 ; 0.10 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 179 A 367 REMARK 3 ORIGIN FOR THE GROUP (A): -0.1580 6.7050 27.2460 REMARK 3 T TENSOR REMARK 3 T11: 0.1467 T22: 0.0727 REMARK 3 T33: -0.0197 T12: 0.0405 REMARK 3 T13: -0.0482 T23: 0.0775 REMARK 3 L TENSOR REMARK 3 L11: 2.8380 L22: 5.3062 REMARK 3 L33: 7.3659 L12: 1.3597 REMARK 3 L13: -1.5334 L23: -1.9313 REMARK 3 S TENSOR REMARK 3 S11: 0.0907 S12: -0.2549 S13: -0.0586 REMARK 3 S21: 0.9171 S22: -0.0538 S23: 0.1361 REMARK 3 S31: -0.3525 S32: -0.0556 S33: -0.0369 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 181 B 367 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7220 35.5600 10.5400 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.1217 REMARK 3 T33: 0.0595 T12: 0.0154 REMARK 3 T13: 0.1113 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.4755 L22: 4.3107 REMARK 3 L33: 7.4381 L12: 1.2059 REMARK 3 L13: -0.5078 L23: -0.5606 REMARK 3 S TENSOR REMARK 3 S11: 0.0697 S12: -0.3332 S13: 0.3188 REMARK 3 S21: 0.2797 S22: 0.1197 S23: -0.1099 REMARK 3 S31: -1.0807 S32: 0.3573 S33: -0.1894 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1ZR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000033022. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93100 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9713 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 72.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.31100 REMARK 200 FOR SHELL : 4.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HOMOLOGY MODEL OF MACROH2A1.2 BASED ON PDB-ID 1HJZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 5000MME 0.1 M BIS-TRIS PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.27450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.32050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.12900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.32050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.27450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.12900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS PRESUMABLY A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 157 REMARK 465 ALA A 158 REMARK 465 LYS A 159 REMARK 465 GLN A 160 REMARK 465 GLY A 161 REMARK 465 GLU A 162 REMARK 465 VAL A 163 REMARK 465 SER A 164 REMARK 465 LYS A 165 REMARK 465 ALA A 166 REMARK 465 ALA A 167 REMARK 465 SER A 168 REMARK 465 ALA A 169 REMARK 465 ASP A 170 REMARK 465 SER A 171 REMARK 465 THR A 172 REMARK 465 THR A 173 REMARK 465 GLU A 174 REMARK 465 GLY A 175 REMARK 465 THR A 176 REMARK 465 PRO A 177 REMARK 465 ALA A 178 REMARK 465 ASP A 368 REMARK 465 ALA A 369 REMARK 465 ASN A 370 REMARK 465 GLY B 157 REMARK 465 ALA B 158 REMARK 465 LYS B 159 REMARK 465 GLN B 160 REMARK 465 GLY B 161 REMARK 465 GLU B 162 REMARK 465 VAL B 163 REMARK 465 SER B 164 REMARK 465 LYS B 165 REMARK 465 ALA B 166 REMARK 465 ALA B 167 REMARK 465 SER B 168 REMARK 465 ALA B 169 REMARK 465 ASP B 170 REMARK 465 SER B 171 REMARK 465 THR B 172 REMARK 465 THR B 173 REMARK 465 GLU B 174 REMARK 465 GLY B 175 REMARK 465 THR B 176 REMARK 465 PRO B 177 REMARK 465 ALA B 178 REMARK 465 ASP B 179 REMARK 465 GLY B 180 REMARK 465 ASP B 368 REMARK 465 ALA B 369 REMARK 465 ASN B 370 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 187 127.84 -171.86 REMARK 500 THR A 217 -135.94 -126.11 REMARK 500 ASP A 225 143.53 -176.69 REMARK 500 ASP A 226 -65.23 -9.36 REMARK 500 PRO A 310 -151.65 -89.50 REMARK 500 LYS A 366 49.93 -73.78 REMARK 500 SER B 200 149.03 -178.48 REMARK 500 THR B 217 -138.21 -124.34 REMARK 500 ASP B 225 147.02 -175.37 REMARK 500 ASP B 226 -64.27 -10.76 REMARK 500 LYS B 303 63.07 38.52 REMARK 500 PRO B 310 -157.17 -92.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 366 LEU A 367 142.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZQ0 RELATED DB: PDB REMARK 900 MACROH2A1.1 (FORM A) REMARK 900 RELATED ID: 1ZR3 RELATED DB: PDB REMARK 900 MACROH2A1.1 (FORM B) DBREF 1ZR5 A 159 370 UNP O75367 H2AY_HUMAN 161 372 DBREF 1ZR5 B 159 370 UNP O75367 H2AY_HUMAN 161 372 SEQADV 1ZR5 GLY A 157 UNP O75367 CLONING ARTIFACT SEQADV 1ZR5 ALA A 158 UNP O75367 CLONING ARTIFACT SEQADV 1ZR5 GLY B 157 UNP O75367 CLONING ARTIFACT SEQADV 1ZR5 ALA B 158 UNP O75367 CLONING ARTIFACT SEQRES 1 A 214 GLY ALA LYS GLN GLY GLU VAL SER LYS ALA ALA SER ALA SEQRES 2 A 214 ASP SER THR THR GLU GLY THR PRO ALA ASP GLY PHE THR SEQRES 3 A 214 VAL LEU SER THR LYS SER LEU PHE LEU GLY GLN LYS LEU SEQRES 4 A 214 ASN LEU ILE HIS SER GLU ILE SER ASN LEU ALA GLY PHE SEQRES 5 A 214 GLU VAL GLU ALA ILE ILE ASN PRO THR ASN ALA ASP ILE SEQRES 6 A 214 ASP LEU LYS ASP ASP LEU GLY ASN THR LEU GLU LYS LYS SEQRES 7 A 214 GLY GLY LYS GLU PHE VAL GLU ALA VAL LEU GLU LEU ARG SEQRES 8 A 214 LYS LYS ASN GLY PRO LEU GLU VAL ALA GLY ALA ALA VAL SEQRES 9 A 214 SER ALA GLY HIS GLY LEU PRO ALA LYS PHE VAL ILE HIS SEQRES 10 A 214 CYS ASN SER PRO VAL TRP GLY ALA ASP LYS CYS GLU GLU SEQRES 11 A 214 LEU LEU GLU LYS THR VAL LYS ASN CYS LEU ALA LEU ALA SEQRES 12 A 214 ASP ASP LYS LYS LEU LYS SER ILE ALA PHE PRO SER ILE SEQRES 13 A 214 GLY SER GLY ARG ASN GLY PHE PRO LYS GLN THR ALA ALA SEQRES 14 A 214 GLN LEU ILE LEU LYS ALA ILE SER SER TYR PHE VAL SER SEQRES 15 A 214 THR MET SER SER SER ILE LYS THR VAL TYR PHE VAL LEU SEQRES 16 A 214 PHE ASP SER GLU SER ILE GLY ILE TYR VAL GLN GLU MET SEQRES 17 A 214 ALA LYS LEU ASP ALA ASN SEQRES 1 B 214 GLY ALA LYS GLN GLY GLU VAL SER LYS ALA ALA SER ALA SEQRES 2 B 214 ASP SER THR THR GLU GLY THR PRO ALA ASP GLY PHE THR SEQRES 3 B 214 VAL LEU SER THR LYS SER LEU PHE LEU GLY GLN LYS LEU SEQRES 4 B 214 ASN LEU ILE HIS SER GLU ILE SER ASN LEU ALA GLY PHE SEQRES 5 B 214 GLU VAL GLU ALA ILE ILE ASN PRO THR ASN ALA ASP ILE SEQRES 6 B 214 ASP LEU LYS ASP ASP LEU GLY ASN THR LEU GLU LYS LYS SEQRES 7 B 214 GLY GLY LYS GLU PHE VAL GLU ALA VAL LEU GLU LEU ARG SEQRES 8 B 214 LYS LYS ASN GLY PRO LEU GLU VAL ALA GLY ALA ALA VAL SEQRES 9 B 214 SER ALA GLY HIS GLY LEU PRO ALA LYS PHE VAL ILE HIS SEQRES 10 B 214 CYS ASN SER PRO VAL TRP GLY ALA ASP LYS CYS GLU GLU SEQRES 11 B 214 LEU LEU GLU LYS THR VAL LYS ASN CYS LEU ALA LEU ALA SEQRES 12 B 214 ASP ASP LYS LYS LEU LYS SER ILE ALA PHE PRO SER ILE SEQRES 13 B 214 GLY SER GLY ARG ASN GLY PHE PRO LYS GLN THR ALA ALA SEQRES 14 B 214 GLN LEU ILE LEU LYS ALA ILE SER SER TYR PHE VAL SER SEQRES 15 B 214 THR MET SER SER SER ILE LYS THR VAL TYR PHE VAL LEU SEQRES 16 B 214 PHE ASP SER GLU SER ILE GLY ILE TYR VAL GLN GLU MET SEQRES 17 B 214 ALA LYS LEU ASP ALA ASN FORMUL 3 HOH *7(H2 O) HELIX 1 1 GLU A 201 PHE A 208 5 8 HELIX 2 2 ASP A 225 GLY A 251 1 27 HELIX 3 3 LYS A 283 LYS A 302 1 20 HELIX 4 4 PRO A 320 THR A 339 1 20 HELIX 5 5 ASP A 353 LYS A 366 1 14 HELIX 6 6 GLU B 201 PHE B 208 5 8 HELIX 7 7 ASP B 225 LYS B 234 1 10 HELIX 8 8 GLY B 235 GLY B 251 1 17 HELIX 9 9 LYS B 283 LYS B 302 1 20 HELIX 10 10 PRO B 320 THR B 339 1 20 HELIX 11 11 ASP B 353 LYS B 366 1 14 SHEET 1 A 7 THR A 182 SER A 188 0 SHEET 2 A 7 LYS A 194 HIS A 199 -1 O LEU A 197 N LEU A 184 SHEET 3 A 7 THR A 346 LEU A 351 1 O PHE A 349 N ILE A 198 SHEET 4 A 7 SER A 306 PHE A 309 1 N PHE A 309 O TYR A 348 SHEET 5 A 7 ALA A 212 PRO A 216 1 N ILE A 214 O ALA A 308 SHEET 6 A 7 PHE A 270 CYS A 274 1 O ILE A 272 N ILE A 213 SHEET 7 A 7 ALA A 258 ALA A 262 -1 N ALA A 259 O HIS A 273 SHEET 1 B 7 THR B 182 SER B 188 0 SHEET 2 B 7 LYS B 194 HIS B 199 -1 O LEU B 197 N LEU B 184 SHEET 3 B 7 THR B 346 LEU B 351 1 O PHE B 349 N ILE B 198 SHEET 4 B 7 SER B 306 PHE B 309 1 N PHE B 309 O TYR B 348 SHEET 5 B 7 ALA B 212 THR B 217 1 N ILE B 214 O ALA B 308 SHEET 6 B 7 PHE B 270 ASN B 275 1 O ILE B 272 N ILE B 213 SHEET 7 B 7 ALA B 258 ALA B 262 -1 N ALA B 259 O HIS B 273 CRYST1 40.549 72.258 144.641 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024662 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013839 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006914 0.00000