data_1ZTF # _entry.id 1ZTF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1ZTF RCSB RCSB033097 WWPDB D_1000033097 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1ZP9 _pdbx_database_related.details 'Crystal Structure of A.fulgidus Rio1 bound to ATP and Manganese ion.' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZTF _pdbx_database_status.recvd_initial_deposition_date 2005-05-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wlodawer, A.' 1 'LaRonde-LeBlanc, N.' 2 # _citation.id primary _citation.title 'Structure and activity of the atypical serine kinase Rio1.' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 272 _citation.page_first 3698 _citation.page_last 3713 _citation.year 2005 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16008568 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2005.04796.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Laronde-Leblanc, N.' 1 primary 'Guszczynski, T.' 2 primary 'Copeland, T.' 3 primary 'Wlodawer, A.' 4 # _cell.entry_id 1ZTF _cell.length_a 42.987 _cell.length_b 52.701 _cell.length_c 63.779 _cell.angle_alpha 90.00 _cell.angle_beta 108.89 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZTF _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Rio1 serine protein kinase' 30653.500 1 ? ? ? ? 2 non-polymer syn '2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL' 267.241 1 ? ? ? ? 3 water nat water 18.015 249 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)KDLKKIESYLDKLRIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITA(MSE)GGVISTGKEANVFYADGVFDG KPVA(MSE)AVKIYRIETSEFDK(MSE)DEYLYGDERFD(MSE)RRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTY (MSE)KNVLL(MSE)EFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNI(MSE)YIDKV YFID(MSE)GQAVTLRHP(MSE)AESYLERDVRNIIRFFSKYGVKADFEE(MSE)LKEVKGE ; _entity_poly.pdbx_seq_one_letter_code_can ;MKDLKKIESYLDKLRIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVK IYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTL VELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYIDKVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFS KYGVKADFEEMLKEVKGE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 LYS n 1 3 ASP n 1 4 LEU n 1 5 LYS n 1 6 LYS n 1 7 ILE n 1 8 GLU n 1 9 SER n 1 10 TYR n 1 11 LEU n 1 12 ASP n 1 13 LYS n 1 14 LEU n 1 15 ARG n 1 16 ILE n 1 17 LYS n 1 18 GLU n 1 19 LYS n 1 20 ASP n 1 21 GLY n 1 22 GLU n 1 23 GLU n 1 24 ARG n 1 25 LYS n 1 26 ILE n 1 27 TYR n 1 28 ALA n 1 29 GLU n 1 30 VAL n 1 31 LEU n 1 32 ASP n 1 33 GLY n 1 34 ARG n 1 35 THR n 1 36 LEU n 1 37 LYS n 1 38 THR n 1 39 LEU n 1 40 TYR n 1 41 LYS n 1 42 LEU n 1 43 SER n 1 44 ALA n 1 45 LYS n 1 46 GLY n 1 47 TYR n 1 48 ILE n 1 49 THR n 1 50 ALA n 1 51 MSE n 1 52 GLY n 1 53 GLY n 1 54 VAL n 1 55 ILE n 1 56 SER n 1 57 THR n 1 58 GLY n 1 59 LYS n 1 60 GLU n 1 61 ALA n 1 62 ASN n 1 63 VAL n 1 64 PHE n 1 65 TYR n 1 66 ALA n 1 67 ASP n 1 68 GLY n 1 69 VAL n 1 70 PHE n 1 71 ASP n 1 72 GLY n 1 73 LYS n 1 74 PRO n 1 75 VAL n 1 76 ALA n 1 77 MSE n 1 78 ALA n 1 79 VAL n 1 80 LYS n 1 81 ILE n 1 82 TYR n 1 83 ARG n 1 84 ILE n 1 85 GLU n 1 86 THR n 1 87 SER n 1 88 GLU n 1 89 PHE n 1 90 ASP n 1 91 LYS n 1 92 MSE n 1 93 ASP n 1 94 GLU n 1 95 TYR n 1 96 LEU n 1 97 TYR n 1 98 GLY n 1 99 ASP n 1 100 GLU n 1 101 ARG n 1 102 PHE n 1 103 ASP n 1 104 MSE n 1 105 ARG n 1 106 ARG n 1 107 ILE n 1 108 SER n 1 109 PRO n 1 110 LYS n 1 111 GLU n 1 112 LYS n 1 113 VAL n 1 114 PHE n 1 115 ILE n 1 116 TRP n 1 117 THR n 1 118 GLU n 1 119 LYS n 1 120 GLU n 1 121 PHE n 1 122 ARG n 1 123 ASN n 1 124 LEU n 1 125 GLU n 1 126 ARG n 1 127 ALA n 1 128 LYS n 1 129 GLU n 1 130 ALA n 1 131 GLY n 1 132 VAL n 1 133 SER n 1 134 VAL n 1 135 PRO n 1 136 GLN n 1 137 PRO n 1 138 TYR n 1 139 THR n 1 140 TYR n 1 141 MSE n 1 142 LYS n 1 143 ASN n 1 144 VAL n 1 145 LEU n 1 146 LEU n 1 147 MSE n 1 148 GLU n 1 149 PHE n 1 150 ILE n 1 151 GLY n 1 152 GLU n 1 153 ASP n 1 154 GLU n 1 155 LEU n 1 156 PRO n 1 157 ALA n 1 158 PRO n 1 159 THR n 1 160 LEU n 1 161 VAL n 1 162 GLU n 1 163 LEU n 1 164 GLY n 1 165 ARG n 1 166 GLU n 1 167 LEU n 1 168 LYS n 1 169 GLU n 1 170 LEU n 1 171 ASP n 1 172 VAL n 1 173 GLU n 1 174 GLY n 1 175 ILE n 1 176 PHE n 1 177 ASN n 1 178 ASP n 1 179 VAL n 1 180 VAL n 1 181 GLU n 1 182 ASN n 1 183 VAL n 1 184 LYS n 1 185 ARG n 1 186 LEU n 1 187 TYR n 1 188 GLN n 1 189 GLU n 1 190 ALA n 1 191 GLU n 1 192 LEU n 1 193 VAL n 1 194 HIS n 1 195 ALA n 1 196 ASP n 1 197 LEU n 1 198 SER n 1 199 GLU n 1 200 TYR n 1 201 ASN n 1 202 ILE n 1 203 MSE n 1 204 TYR n 1 205 ILE n 1 206 ASP n 1 207 LYS n 1 208 VAL n 1 209 TYR n 1 210 PHE n 1 211 ILE n 1 212 ASP n 1 213 MSE n 1 214 GLY n 1 215 GLN n 1 216 ALA n 1 217 VAL n 1 218 THR n 1 219 LEU n 1 220 ARG n 1 221 HIS n 1 222 PRO n 1 223 MSE n 1 224 ALA n 1 225 GLU n 1 226 SER n 1 227 TYR n 1 228 LEU n 1 229 GLU n 1 230 ARG n 1 231 ASP n 1 232 VAL n 1 233 ARG n 1 234 ASN n 1 235 ILE n 1 236 ILE n 1 237 ARG n 1 238 PHE n 1 239 PHE n 1 240 SER n 1 241 LYS n 1 242 TYR n 1 243 GLY n 1 244 VAL n 1 245 LYS n 1 246 ALA n 1 247 ASP n 1 248 PHE n 1 249 GLU n 1 250 GLU n 1 251 MSE n 1 252 LEU n 1 253 LYS n 1 254 GLU n 1 255 VAL n 1 256 LYS n 1 257 GLY n 1 258 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Archaeoglobus _entity_src_gen.pdbx_gene_src_gene Rio1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2234 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code NP_070631 _struct_ref.pdbx_db_accession 11499392 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKDLKKIESYLDKLRIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVK IYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTL VELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYIDKVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFS KYGVKADFEEMLKEVKGE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1ZTF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 258 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 11499392 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 258 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 258 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ZTF MSE A 1 ? GB 11499392 MET 1 'MODIFIED RESIDUE' 1 1 1 1ZTF MSE A 51 ? GB 11499392 MET 51 'MODIFIED RESIDUE' 51 2 1 1ZTF MSE A 77 ? GB 11499392 MET 77 'MODIFIED RESIDUE' 77 3 1 1ZTF MSE A 92 ? GB 11499392 MET 92 'MODIFIED RESIDUE' 92 4 1 1ZTF MSE A 104 ? GB 11499392 MET 104 'MODIFIED RESIDUE' 104 5 1 1ZTF MSE A 141 ? GB 11499392 MET 141 'MODIFIED RESIDUE' 141 6 1 1ZTF MSE A 147 ? GB 11499392 MET 147 'MODIFIED RESIDUE' 147 7 1 1ZTF MSE A 203 ? GB 11499392 MET 203 'MODIFIED RESIDUE' 203 8 1 1ZTF MSE A 213 ? GB 11499392 MET 213 'MODIFIED RESIDUE' 213 9 1 1ZTF MSE A 223 ? GB 11499392 MET 223 'MODIFIED RESIDUE' 223 10 1 1ZTF MSE A 251 ? GB 11499392 MET 251 'MODIFIED RESIDUE' 251 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYA non-polymer . '2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL' 9-BETA-D-XYLOFURANOSYL-ADENINE 'C10 H13 N5 O4' 267.241 # _exptl.entry_id 1ZTF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_details 'PEG 4000, MES, ammonuim sulfate, pH 6.3, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-07-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9794 1.0 2 0.9795 1.0 3 1.0000 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9794, 0.9795, 1.0000' # _reflns.entry_id 1ZTF _reflns.observed_criterion_sigma_I 0.00 _reflns.observed_criterion_sigma_F 0.00 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 1.99 _reflns.number_obs 18215 _reflns.number_all 18480 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.066 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1ZTF _refine.ls_number_reflns_obs 17678 _refine.ls_number_reflns_all 18480 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.84 _refine.ls_d_res_high 1.99 _refine.ls_percent_reflns_obs 99.67 _refine.ls_R_factor_obs 0.16683 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16304 _refine.ls_R_factor_R_free 0.23569 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 948 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 35.304 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] -0.10 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.07 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.174 _refine.pdbx_overall_ESU_R_Free 0.173 _refine.overall_SU_ML 0.118 _refine.overall_SU_B 4.150 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ZTF _refine_analyze.Luzzati_coordinate_error_obs 0.214 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2045 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 2313 _refine_hist.d_res_high 1.99 _refine_hist.d_res_low 39.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.030 0.022 ? 2103 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 1934 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.096 1.996 ? 2829 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.885 3.000 ? 4500 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.979 5.000 ? 252 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.484 24.343 ? 99 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.898 15.000 ? 398 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.441 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.163 0.200 ? 307 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 2300 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.000 0.020 ? 431 'X-RAY DIFFRACTION' ? r_nbd_refined 0.268 0.300 ? 516 'X-RAY DIFFRACTION' ? r_nbd_other 0.254 0.300 ? 1958 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.206 0.500 ? 1047 'X-RAY DIFFRACTION' ? r_nbtor_other 0.103 0.500 ? 1210 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.254 0.500 ? 264 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.117 0.500 ? 2 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.291 0.300 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.274 0.300 ? 51 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.276 0.500 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 8.145 2.000 ? 1318 'X-RAY DIFFRACTION' ? r_mcbond_other 2.657 2.000 ? 517 'X-RAY DIFFRACTION' ? r_mcangle_it 9.218 3.000 ? 2017 'X-RAY DIFFRACTION' ? r_scbond_it 10.671 2.000 ? 938 'X-RAY DIFFRACTION' ? r_scangle_it 13.056 3.000 ? 812 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.990 _refine_ls_shell.d_res_low 2.042 _refine_ls_shell.number_reflns_R_work 1270 _refine_ls_shell.R_factor_R_work 0.195 _refine_ls_shell.percent_reflns_obs 96.79 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1ZTF _struct.title 'Crystal Structure of A.fulgidus Rio1 serine protein kinase' _struct.pdbx_descriptor 'Rio1 serine protein kinase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZTF _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'protein Kinase, ribosome biogenesis, rRNA, Transferase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 10 ? LEU A 14 ? TYR A 10 LEU A 14 5 ? 5 HELX_P HELX_P2 2 ASP A 20 ? LEU A 31 ? ASP A 20 LEU A 31 1 ? 12 HELX_P HELX_P3 3 ASP A 32 ? LYS A 45 ? ASP A 32 LYS A 45 1 ? 14 HELX_P HELX_P4 4 ASP A 90 ? LEU A 96 ? ASP A 90 LEU A 96 1 ? 7 HELX_P HELX_P5 5 ASP A 103 ? ILE A 107 ? ASP A 103 ILE A 107 5 ? 5 HELX_P HELX_P6 6 SER A 108 ? LYS A 110 ? SER A 108 LYS A 110 5 ? 3 HELX_P HELX_P7 7 GLU A 111 ? ALA A 130 ? GLU A 111 ALA A 130 1 ? 20 HELX_P HELX_P8 8 THR A 159 ? GLY A 164 ? THR A 159 GLY A 164 1 ? 6 HELX_P HELX_P9 9 ARG A 165 ? LEU A 170 ? ARG A 165 LEU A 170 5 ? 6 HELX_P HELX_P10 10 ASP A 171 ? GLU A 189 ? ASP A 171 GLU A 189 1 ? 19 HELX_P HELX_P11 11 ASP A 212 ? GLY A 214 ? ASP A 212 GLY A 214 5 ? 3 HELX_P HELX_P12 12 MSE A 223 ? LYS A 241 ? MSE A 223 LYS A 241 1 ? 19 HELX_P HELX_P13 13 ASP A 247 ? GLY A 257 ? ASP A 247 GLY A 257 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 50 C ? ? ? 1_555 A MSE 51 N ? ? A ALA 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.318 ? covale2 covale ? ? A MSE 51 C ? ? ? 1_555 A GLY 52 N ? ? A MSE 51 A GLY 52 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A ALA 76 C ? ? ? 1_555 A MSE 77 N ? ? A ALA 76 A MSE 77 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A MSE 77 C ? ? ? 1_555 A ALA 78 N ? ? A MSE 77 A ALA 78 1_555 ? ? ? ? ? ? ? 1.344 ? covale5 covale ? ? A LYS 91 C ? ? ? 1_555 A MSE 92 N ? ? A LYS 91 A MSE 92 1_555 ? ? ? ? ? ? ? 1.329 ? covale6 covale ? ? A MSE 92 C ? ? ? 1_555 A ASP 93 N ? ? A MSE 92 A ASP 93 1_555 ? ? ? ? ? ? ? 1.314 ? covale7 covale ? ? A ASP 103 C ? ? ? 1_555 A MSE 104 N ? ? A ASP 103 A MSE 104 1_555 ? ? ? ? ? ? ? 1.320 ? covale8 covale ? ? A MSE 104 C ? ? ? 1_555 A ARG 105 N ? ? A MSE 104 A ARG 105 1_555 ? ? ? ? ? ? ? 1.341 ? covale9 covale ? ? A TYR 140 C ? ? ? 1_555 A MSE 141 N ? ? A TYR 140 A MSE 141 1_555 ? ? ? ? ? ? ? 1.339 ? covale10 covale ? ? A MSE 141 C ? ? ? 1_555 A LYS 142 N ? ? A MSE 141 A LYS 142 1_555 ? ? ? ? ? ? ? 1.322 ? covale11 covale ? ? A LEU 146 C ? ? ? 1_555 A MSE 147 N ? ? A LEU 146 A MSE 147 1_555 ? ? ? ? ? ? ? 1.321 ? covale12 covale ? ? A MSE 147 C ? ? ? 1_555 A GLU 148 N ? ? A MSE 147 A GLU 148 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? A ILE 202 C ? ? ? 1_555 A MSE 203 N ? ? A ILE 202 A MSE 203 1_555 ? ? ? ? ? ? ? 1.337 ? covale14 covale ? ? A MSE 203 C ? ? ? 1_555 A TYR 204 N ? ? A MSE 203 A TYR 204 1_555 ? ? ? ? ? ? ? 1.353 ? covale15 covale ? ? A ASP 212 C ? ? ? 1_555 A MSE 213 N ? ? A ASP 212 A MSE 213 1_555 ? ? ? ? ? ? ? 1.306 ? covale16 covale ? ? A MSE 213 C ? ? ? 1_555 A GLY 214 N ? ? A MSE 213 A GLY 214 1_555 ? ? ? ? ? ? ? 1.298 ? covale17 covale ? ? A PRO 222 C ? ? ? 1_555 A MSE 223 N ? ? A PRO 222 A MSE 223 1_555 ? ? ? ? ? ? ? 1.322 ? covale18 covale ? ? A MSE 223 C ? ? ? 1_555 A ALA 224 N ? ? A MSE 223 A ALA 224 1_555 ? ? ? ? ? ? ? 1.322 ? covale19 covale ? ? A GLU 250 C ? ? ? 1_555 A MSE 251 N ? ? A GLU 250 A MSE 251 1_555 ? ? ? ? ? ? ? 1.332 ? covale20 covale ? ? A MSE 251 C ? ? ? 1_555 A LEU 252 N ? ? A MSE 251 A LEU 252 1_555 ? ? ? ? ? ? ? 1.311 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 48 ? SER A 56 ? ILE A 48 SER A 56 A 2 ALA A 61 ? PHE A 70 ? ALA A 61 PHE A 70 A 3 LYS A 73 ? TYR A 82 ? LYS A 73 TYR A 82 A 4 VAL A 144 ? GLU A 148 ? VAL A 144 GLU A 148 A 5 PRO A 137 ? MSE A 141 ? PRO A 137 MSE A 141 B 1 GLY A 151 ? GLU A 152 ? GLY A 151 GLU A 152 B 2 LEU A 155 ? PRO A 156 ? LEU A 155 PRO A 156 C 1 LEU A 192 ? HIS A 194 ? LEU A 192 HIS A 194 C 2 ALA A 216 ? THR A 218 ? ALA A 216 THR A 218 D 1 ILE A 202 ? TYR A 204 ? ILE A 202 TYR A 204 D 2 VAL A 208 ? PHE A 210 ? VAL A 208 PHE A 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 56 ? N SER A 56 O VAL A 63 ? O VAL A 63 A 2 3 N ASN A 62 ? N ASN A 62 O ILE A 81 ? O ILE A 81 A 3 4 N ALA A 78 ? N ALA A 78 O MSE A 147 ? O MSE A 147 A 4 5 O LEU A 146 ? O LEU A 146 N THR A 139 ? N THR A 139 B 1 2 N GLU A 152 ? N GLU A 152 O LEU A 155 ? O LEU A 155 C 1 2 N VAL A 193 ? N VAL A 193 O VAL A 217 ? O VAL A 217 D 1 2 N MSE A 203 ? N MSE A 203 O TYR A 209 ? O TYR A 209 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE XYA A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ILE A 55 ? ILE A 55 . ? 1_555 ? 2 AC1 11 SER A 56 ? SER A 56 . ? 1_555 ? 3 AC1 11 PRO A 135 ? PRO A 135 . ? 1_555 ? 4 AC1 11 GLU A 148 ? GLU A 148 . ? 1_555 ? 5 AC1 11 PHE A 149 ? PHE A 149 . ? 1_555 ? 6 AC1 11 ILE A 150 ? ILE A 150 . ? 1_555 ? 7 AC1 11 MSE A 203 ? MSE A 203 . ? 1_555 ? 8 AC1 11 ILE A 211 ? ILE A 211 . ? 1_555 ? 9 AC1 11 HOH C . ? HOH A 309 . ? 1_555 ? 10 AC1 11 HOH C . ? HOH A 332 . ? 1_555 ? 11 AC1 11 HOH C . ? HOH A 410 . ? 1_555 ? # _database_PDB_matrix.entry_id 1ZTF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZTF _atom_sites.fract_transf_matrix[1][1] 0.023263 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007960 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018975 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016572 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 LYS 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 LEU 4 4 ? ? ? A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 MSE 51 51 51 MSE MSE A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 MSE 77 77 77 MSE MSE A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 MSE 92 92 92 MSE MSE A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 MSE 104 104 104 MSE MSE A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 TRP 116 116 116 TRP TRP A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 LYS 128 128 128 LYS LYS A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 MSE 141 141 141 MSE MSE A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 MSE 147 147 147 MSE MSE A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 GLN 188 188 188 GLN GLN A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 HIS 194 194 194 HIS HIS A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 TYR 200 200 200 TYR TYR A . n A 1 201 ASN 201 201 201 ASN ASN A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 MSE 203 203 203 MSE MSE A . n A 1 204 TYR 204 204 204 TYR TYR A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 PHE 210 210 210 PHE PHE A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 MSE 213 213 213 MSE MSE A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 GLN 215 215 215 GLN GLN A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 PRO 222 222 222 PRO PRO A . n A 1 223 MSE 223 223 223 MSE MSE A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 GLU 225 225 225 GLU GLU A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 TYR 227 227 227 TYR TYR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 ASP 231 231 231 ASP ASP A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 ARG 233 233 233 ARG ARG A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 PHE 238 238 238 PHE PHE A . n A 1 239 PHE 239 239 239 PHE PHE A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 LYS 241 241 241 LYS LYS A . n A 1 242 TYR 242 242 242 TYR TYR A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 LYS 245 245 245 LYS LYS A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 ASP 247 247 247 ASP ASP A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 GLU 250 250 250 GLU GLU A . n A 1 251 MSE 251 251 251 MSE MSE A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 LYS 253 253 253 LYS LYS A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 LYS 256 256 256 LYS LYS A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 GLU 258 258 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XYA 1 300 300 XYA ADN A . C 3 HOH 1 301 301 HOH HOH A . C 3 HOH 2 302 302 HOH HOH A . C 3 HOH 3 303 303 HOH HOH A . C 3 HOH 4 304 304 HOH HOH A . C 3 HOH 5 305 305 HOH HOH A . C 3 HOH 6 306 306 HOH HOH A . C 3 HOH 7 307 307 HOH HOH A . C 3 HOH 8 308 308 HOH HOH A . C 3 HOH 9 309 309 HOH HOH A . C 3 HOH 10 310 310 HOH HOH A . C 3 HOH 11 311 311 HOH HOH A . C 3 HOH 12 312 312 HOH HOH A . C 3 HOH 13 313 313 HOH HOH A . C 3 HOH 14 314 314 HOH HOH A . C 3 HOH 15 315 315 HOH HOH A . C 3 HOH 16 316 316 HOH HOH A . C 3 HOH 17 317 317 HOH HOH A . C 3 HOH 18 318 318 HOH HOH A . C 3 HOH 19 319 319 HOH HOH A . C 3 HOH 20 320 320 HOH HOH A . C 3 HOH 21 321 321 HOH HOH A . C 3 HOH 22 322 322 HOH HOH A . C 3 HOH 23 323 323 HOH HOH A . C 3 HOH 24 324 324 HOH HOH A . C 3 HOH 25 325 325 HOH HOH A . C 3 HOH 26 326 326 HOH HOH A . C 3 HOH 27 327 327 HOH HOH A . C 3 HOH 28 328 328 HOH HOH A . C 3 HOH 29 329 329 HOH HOH A . C 3 HOH 30 330 330 HOH HOH A . C 3 HOH 31 331 331 HOH HOH A . C 3 HOH 32 332 332 HOH HOH A . C 3 HOH 33 333 333 HOH HOH A . C 3 HOH 34 334 334 HOH HOH A . C 3 HOH 35 335 335 HOH HOH A . C 3 HOH 36 336 336 HOH HOH A . C 3 HOH 37 337 337 HOH HOH A . C 3 HOH 38 338 338 HOH HOH A . C 3 HOH 39 339 339 HOH HOH A . C 3 HOH 40 340 340 HOH HOH A . C 3 HOH 41 341 341 HOH HOH A . C 3 HOH 42 342 342 HOH HOH A . C 3 HOH 43 343 343 HOH HOH A . C 3 HOH 44 344 344 HOH HOH A . C 3 HOH 45 345 345 HOH HOH A . C 3 HOH 46 346 346 HOH HOH A . C 3 HOH 47 347 347 HOH HOH A . C 3 HOH 48 348 348 HOH HOH A . C 3 HOH 49 349 349 HOH HOH A . C 3 HOH 50 350 350 HOH HOH A . C 3 HOH 51 351 351 HOH HOH A . C 3 HOH 52 352 352 HOH HOH A . C 3 HOH 53 353 353 HOH HOH A . C 3 HOH 54 354 354 HOH HOH A . C 3 HOH 55 355 355 HOH HOH A . C 3 HOH 56 356 356 HOH HOH A . C 3 HOH 57 357 357 HOH HOH A . C 3 HOH 58 358 358 HOH HOH A . C 3 HOH 59 359 359 HOH HOH A . C 3 HOH 60 360 360 HOH HOH A . C 3 HOH 61 361 361 HOH HOH A . C 3 HOH 62 362 362 HOH HOH A . C 3 HOH 63 363 363 HOH HOH A . C 3 HOH 64 364 364 HOH HOH A . C 3 HOH 65 365 365 HOH HOH A . C 3 HOH 66 366 366 HOH HOH A . C 3 HOH 67 367 367 HOH HOH A . C 3 HOH 68 368 368 HOH HOH A . C 3 HOH 69 369 369 HOH HOH A . C 3 HOH 70 370 370 HOH HOH A . C 3 HOH 71 371 371 HOH HOH A . C 3 HOH 72 372 372 HOH HOH A . C 3 HOH 73 373 373 HOH HOH A . C 3 HOH 74 374 374 HOH HOH A . C 3 HOH 75 375 375 HOH HOH A . C 3 HOH 76 376 376 HOH HOH A . C 3 HOH 77 377 377 HOH HOH A . C 3 HOH 78 378 378 HOH HOH A . C 3 HOH 79 379 379 HOH HOH A . C 3 HOH 80 381 381 HOH HOH A . C 3 HOH 81 382 382 HOH HOH A . C 3 HOH 82 383 383 HOH HOH A . C 3 HOH 83 384 384 HOH HOH A . C 3 HOH 84 385 385 HOH HOH A . C 3 HOH 85 386 386 HOH HOH A . C 3 HOH 86 387 387 HOH HOH A . C 3 HOH 87 388 388 HOH HOH A . C 3 HOH 88 389 389 HOH HOH A . C 3 HOH 89 390 390 HOH HOH A . C 3 HOH 90 391 391 HOH HOH A . C 3 HOH 91 392 392 HOH HOH A . C 3 HOH 92 393 393 HOH HOH A . C 3 HOH 93 394 394 HOH HOH A . C 3 HOH 94 395 395 HOH HOH A . C 3 HOH 95 396 396 HOH HOH A . C 3 HOH 96 397 397 HOH HOH A . C 3 HOH 97 398 398 HOH HOH A . C 3 HOH 98 399 399 HOH HOH A . C 3 HOH 99 400 400 HOH HOH A . C 3 HOH 100 401 401 HOH HOH A . C 3 HOH 101 402 402 HOH HOH A . C 3 HOH 102 403 403 HOH HOH A . C 3 HOH 103 404 404 HOH HOH A . C 3 HOH 104 405 405 HOH HOH A . C 3 HOH 105 406 406 HOH HOH A . C 3 HOH 106 407 407 HOH HOH A . C 3 HOH 107 408 408 HOH HOH A . C 3 HOH 108 409 409 HOH HOH A . C 3 HOH 109 410 410 HOH HOH A . C 3 HOH 110 411 411 HOH HOH A . C 3 HOH 111 412 412 HOH HOH A . C 3 HOH 112 413 413 HOH HOH A . C 3 HOH 113 414 414 HOH HOH A . C 3 HOH 114 415 415 HOH HOH A . C 3 HOH 115 416 416 HOH HOH A . C 3 HOH 116 417 417 HOH HOH A . C 3 HOH 117 418 418 HOH HOH A . C 3 HOH 118 419 419 HOH HOH A . C 3 HOH 119 420 420 HOH HOH A . C 3 HOH 120 421 421 HOH HOH A . C 3 HOH 121 422 422 HOH HOH A . C 3 HOH 122 423 423 HOH HOH A . C 3 HOH 123 424 424 HOH HOH A . C 3 HOH 124 425 425 HOH HOH A . C 3 HOH 125 426 426 HOH HOH A . C 3 HOH 126 427 427 HOH HOH A . C 3 HOH 127 428 428 HOH HOH A . C 3 HOH 128 429 429 HOH HOH A . C 3 HOH 129 430 430 HOH HOH A . C 3 HOH 130 431 431 HOH HOH A . C 3 HOH 131 432 432 HOH HOH A . C 3 HOH 132 433 433 HOH HOH A . C 3 HOH 133 434 434 HOH HOH A . C 3 HOH 134 435 435 HOH HOH A . C 3 HOH 135 436 436 HOH HOH A . C 3 HOH 136 437 437 HOH HOH A . C 3 HOH 137 438 438 HOH HOH A . C 3 HOH 138 439 439 HOH HOH A . C 3 HOH 139 440 440 HOH HOH A . C 3 HOH 140 441 441 HOH HOH A . C 3 HOH 141 442 442 HOH HOH A . C 3 HOH 142 443 443 HOH HOH A . C 3 HOH 143 444 444 HOH HOH A . C 3 HOH 144 445 445 HOH HOH A . C 3 HOH 145 446 446 HOH HOH A . C 3 HOH 146 447 447 HOH HOH A . C 3 HOH 147 448 448 HOH HOH A . C 3 HOH 148 449 449 HOH HOH A . C 3 HOH 149 450 450 HOH HOH A . C 3 HOH 150 451 451 HOH HOH A . C 3 HOH 151 452 452 HOH HOH A . C 3 HOH 152 453 453 HOH HOH A . C 3 HOH 153 454 454 HOH HOH A . C 3 HOH 154 455 455 HOH HOH A . C 3 HOH 155 456 456 HOH HOH A . C 3 HOH 156 457 457 HOH HOH A . C 3 HOH 157 458 458 HOH HOH A . C 3 HOH 158 459 459 HOH HOH A . C 3 HOH 159 460 460 HOH HOH A . C 3 HOH 160 461 461 HOH HOH A . C 3 HOH 161 462 462 HOH HOH A . C 3 HOH 162 463 463 HOH HOH A . C 3 HOH 163 464 464 HOH HOH A . C 3 HOH 164 465 465 HOH HOH A . C 3 HOH 165 466 466 HOH HOH A . C 3 HOH 166 467 467 HOH HOH A . C 3 HOH 167 468 468 HOH HOH A . C 3 HOH 168 469 469 HOH HOH A . C 3 HOH 169 470 470 HOH HOH A . C 3 HOH 170 471 471 HOH HOH A . C 3 HOH 171 472 472 HOH HOH A . C 3 HOH 172 473 473 HOH HOH A . C 3 HOH 173 474 474 HOH HOH A . C 3 HOH 174 475 475 HOH HOH A . C 3 HOH 175 476 476 HOH HOH A . C 3 HOH 176 477 477 HOH HOH A . C 3 HOH 177 478 478 HOH HOH A . C 3 HOH 178 479 479 HOH HOH A . C 3 HOH 179 480 480 HOH HOH A . C 3 HOH 180 481 481 HOH HOH A . C 3 HOH 181 482 482 HOH HOH A . C 3 HOH 182 483 483 HOH HOH A . C 3 HOH 183 484 484 HOH HOH A . C 3 HOH 184 485 485 HOH HOH A . C 3 HOH 185 486 486 HOH HOH A . C 3 HOH 186 487 487 HOH HOH A . C 3 HOH 187 488 488 HOH HOH A . C 3 HOH 188 489 489 HOH HOH A . C 3 HOH 189 490 490 HOH HOH A . C 3 HOH 190 491 491 HOH HOH A . C 3 HOH 191 492 492 HOH HOH A . C 3 HOH 192 493 493 HOH HOH A . C 3 HOH 193 494 494 HOH HOH A . C 3 HOH 194 495 495 HOH HOH A . C 3 HOH 195 496 496 HOH HOH A . C 3 HOH 196 497 497 HOH HOH A . C 3 HOH 197 498 498 HOH HOH A . C 3 HOH 198 499 499 HOH HOH A . C 3 HOH 199 500 500 HOH HOH A . C 3 HOH 200 501 501 HOH HOH A . C 3 HOH 201 502 502 HOH HOH A . C 3 HOH 202 503 503 HOH HOH A . C 3 HOH 203 504 504 HOH HOH A . C 3 HOH 204 505 505 HOH HOH A . C 3 HOH 205 506 506 HOH HOH A . C 3 HOH 206 507 507 HOH HOH A . C 3 HOH 207 508 508 HOH HOH A . C 3 HOH 208 509 509 HOH HOH A . C 3 HOH 209 510 510 HOH HOH A . C 3 HOH 210 511 511 HOH HOH A . C 3 HOH 211 513 513 HOH HOH A . C 3 HOH 212 514 514 HOH HOH A . C 3 HOH 213 515 515 HOH HOH A . C 3 HOH 214 516 516 HOH HOH A . C 3 HOH 215 517 517 HOH HOH A . C 3 HOH 216 518 518 HOH HOH A . C 3 HOH 217 519 519 HOH HOH A . C 3 HOH 218 520 520 HOH HOH A . C 3 HOH 219 521 521 HOH HOH A . C 3 HOH 220 522 522 HOH HOH A . C 3 HOH 221 523 523 HOH HOH A . C 3 HOH 222 524 524 HOH HOH A . C 3 HOH 223 525 525 HOH HOH A . C 3 HOH 224 526 526 HOH HOH A . C 3 HOH 225 527 527 HOH HOH A . C 3 HOH 226 528 528 HOH HOH A . C 3 HOH 227 529 529 HOH HOH A . C 3 HOH 228 530 530 HOH HOH A . C 3 HOH 229 531 531 HOH HOH A . C 3 HOH 230 532 532 HOH HOH A . C 3 HOH 231 534 534 HOH HOH A . C 3 HOH 232 535 535 HOH HOH A . C 3 HOH 233 536 536 HOH HOH A . C 3 HOH 234 537 537 HOH HOH A . C 3 HOH 235 539 539 HOH HOH A . C 3 HOH 236 540 540 HOH HOH A . C 3 HOH 237 541 541 HOH HOH A . C 3 HOH 238 542 542 HOH HOH A . C 3 HOH 239 543 543 HOH HOH A . C 3 HOH 240 544 544 HOH HOH A . C 3 HOH 241 545 545 HOH HOH A . C 3 HOH 242 546 546 HOH HOH A . C 3 HOH 243 547 547 HOH HOH A . C 3 HOH 244 549 549 HOH HOH A . C 3 HOH 245 550 550 HOH HOH A . C 3 HOH 246 552 552 HOH HOH A . C 3 HOH 247 553 553 HOH HOH A . C 3 HOH 248 554 554 HOH HOH A . C 3 HOH 249 555 555 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 51 A MSE 51 ? MET SELENOMETHIONINE 2 A MSE 77 A MSE 77 ? MET SELENOMETHIONINE 3 A MSE 92 A MSE 92 ? MET SELENOMETHIONINE 4 A MSE 104 A MSE 104 ? MET SELENOMETHIONINE 5 A MSE 141 A MSE 141 ? MET SELENOMETHIONINE 6 A MSE 147 A MSE 147 ? MET SELENOMETHIONINE 7 A MSE 203 A MSE 203 ? MET SELENOMETHIONINE 8 A MSE 213 A MSE 213 ? MET SELENOMETHIONINE 9 A MSE 223 A MSE 223 ? MET SELENOMETHIONINE 10 A MSE 251 A MSE 251 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MAR345 'data collection' . ? 2 HKL-2000 'data scaling' . ? 3 SHARP phasing . ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 SE A MSE 51 ? ? CE A MSE 51 ? ? 1.519 1.950 -0.431 0.059 N 2 1 CB A VAL 79 ? ? CG2 A VAL 79 ? ? 1.657 1.524 0.133 0.021 N 3 1 CB A VAL 208 ? ? CG2 A VAL 208 ? ? 1.391 1.524 -0.133 0.021 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 126 ? ? CZ A ARG 126 ? ? NH1 A ARG 126 ? ? 127.15 120.30 6.85 0.50 N 2 1 NE A ARG 126 ? ? CZ A ARG 126 ? ? NH2 A ARG 126 ? ? 115.89 120.30 -4.41 0.50 N 3 1 CB A LEU 145 ? ? CG A LEU 145 ? ? CD1 A LEU 145 ? ? 99.41 111.00 -11.59 1.70 N 4 1 NE A ARG 185 ? ? CZ A ARG 185 ? ? NH1 A ARG 185 ? ? 123.39 120.30 3.09 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 12 ? ? -68.08 1.42 2 1 GLU A 85 ? ? -48.58 104.13 3 1 GLU A 88 ? ? 35.62 69.96 4 1 PHE A 89 ? ? 35.61 55.15 5 1 ASP A 90 ? ? -39.88 142.33 6 1 ARG A 105 ? ? -54.07 -6.01 7 1 TYR A 138 ? ? -102.91 -67.89 8 1 LYS A 142 ? ? 61.96 -130.76 9 1 ASP A 171 ? ? 84.87 67.15 10 1 ASP A 196 ? ? -161.45 68.12 11 1 ILE A 205 ? ? -117.53 -73.23 12 1 GLN A 215 ? ? -92.07 36.37 13 1 LYS A 241 ? ? -48.70 -16.16 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 87 ? ? GLU A 88 ? ? 85.02 2 1 GLU A 88 ? ? PHE A 89 ? ? 145.90 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 85 ? CG ? A GLU 85 CG 2 1 Y 1 A GLU 85 ? CD ? A GLU 85 CD 3 1 Y 1 A GLU 85 ? OE1 ? A GLU 85 OE1 4 1 Y 1 A GLU 85 ? OE2 ? A GLU 85 OE2 5 1 Y 1 A THR 86 ? OG1 ? A THR 86 OG1 6 1 Y 1 A THR 86 ? CG2 ? A THR 86 CG2 7 1 Y 1 A SER 87 ? OG ? A SER 87 OG 8 1 Y 1 A GLU 88 ? CG ? A GLU 88 CG 9 1 Y 1 A GLU 88 ? CD ? A GLU 88 CD 10 1 Y 1 A GLU 88 ? OE1 ? A GLU 88 OE1 11 1 Y 1 A GLU 88 ? OE2 ? A GLU 88 OE2 12 1 Y 1 A PHE 89 ? CG ? A PHE 89 CG 13 1 Y 1 A PHE 89 ? CD1 ? A PHE 89 CD1 14 1 Y 1 A PHE 89 ? CD2 ? A PHE 89 CD2 15 1 Y 1 A PHE 89 ? CE1 ? A PHE 89 CE1 16 1 Y 1 A PHE 89 ? CE2 ? A PHE 89 CE2 17 1 Y 1 A PHE 89 ? CZ ? A PHE 89 CZ 18 1 Y 1 A ARG 105 ? CG ? A ARG 105 CG 19 1 Y 1 A ARG 105 ? CD ? A ARG 105 CD 20 1 Y 1 A ARG 105 ? NE ? A ARG 105 NE 21 1 Y 1 A ARG 105 ? CZ ? A ARG 105 CZ 22 1 Y 1 A ARG 105 ? NH1 ? A ARG 105 NH1 23 1 Y 1 A ARG 105 ? NH2 ? A ARG 105 NH2 24 1 Y 1 A ARG 106 ? CG ? A ARG 106 CG 25 1 Y 1 A ARG 106 ? CD ? A ARG 106 CD 26 1 Y 1 A ARG 106 ? NE ? A ARG 106 NE 27 1 Y 1 A ARG 106 ? CZ ? A ARG 106 CZ 28 1 Y 1 A ARG 106 ? NH1 ? A ARG 106 NH1 29 1 Y 1 A ARG 106 ? NH2 ? A ARG 106 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A LYS 2 ? A LYS 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A LEU 4 ? A LEU 4 5 1 Y 1 A GLU 258 ? A GLU 258 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL' XYA 3 water HOH #