HEADER DNA, RNA BINDING PROTEIN/DNA 27-MAY-05 1ZTG TITLE HUMAN ALPHA POLYC BINDING PROTEIN KH1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(RC)-BINDING PROTEIN 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: KH1; COMPND 5 SYNONYM: PCBP1, ALPHA-CP1, HNRNP-E1, NUCLEIC ACID BINDING PROTEIN COMPND 6 SUB2.3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(P*CP*CP*CP*TP*CP*CP*CP*T)-3'; COMPND 10 CHAIN: Y, Z; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PCBP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P2; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS KH-MOTIF, KH-DOMAIN, PROTEIN-DNA COMPLEX, DNA, RNA BINDING PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.SIDIQI,J.A.WILCE,A.BARKER,J.SCHMIDGERGER,P.J.LEEDMAN,M.C.J.WILCE REVDAT 6 25-OCT-23 1ZTG 1 SEQADV REVDAT 5 17-JUL-13 1ZTG 1 JRNL REVDAT 4 07-MAR-12 1ZTG 1 JRNL REVDAT 3 13-JUL-11 1ZTG 1 VERSN REVDAT 2 24-FEB-09 1ZTG 1 VERSN REVDAT 1 27-MAY-06 1ZTG 0 JRNL AUTH Y.M.K.YOGA,D.A.K.TRAORE,M.SIDIQI,C.SZETO,N.R.PENDINI, JRNL AUTH 2 A.BARKER,P.J.LEEDMAN,J.A.WILCE,M.C.J.WILCE JRNL TITL CONTRIBUTION OF THE FIRST K-HOMOLOGY DOMAIN OF JRNL TITL 2 POLY(C)-BINDING PROTEIN 1 TO ITS AFFINITY AND SPECIFICITY JRNL TITL 3 FOR C-RICH OLIGONUCLEOTIDES JRNL REF NUCLEIC ACIDS RES. V. 40 5101 2012 JRNL REFN ISSN 0305-1048 JRNL PMID 22344691 JRNL DOI 10.1093/NAR/GKS058 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 7576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 368 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 577 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.3580 REMARK 3 BIN FREE R VALUE SET COUNT : 29 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2218 REMARK 3 NUCLEIC ACID ATOMS : 308 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 83.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.516 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.643 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 83.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2574 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3500 ; 1.317 ; 2.142 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 285 ; 5.576 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;44.972 ;23.953 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 467 ;21.859 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;17.706 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 419 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1716 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1208 ; 0.241 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1759 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 96 ; 0.163 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 85 ; 0.234 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.093 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1449 ; 0.161 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2296 ; 0.290 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1243 ; 0.449 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1204 ; 0.676 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 13 A 83 4 REMARK 3 1 B 13 B 83 4 REMARK 3 1 C 13 C 83 4 REMARK 3 1 D 13 D 83 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 547 ; .53 ; .50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 547 ; .53 ; .50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 547 ; .48 ; .50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 547 ; .55 ; .50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 547 ; .27 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 547 ; .23 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 547 ; .21 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 547 ; .21 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : Y Z REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 Y 3 Y 10 4 REMARK 3 1 Z 3 Z 10 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 Y (A): 154 ; .65 ; .50 REMARK 3 MEDIUM THERMAL 2 Y (A**2): 154 ; .24 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 84 REMARK 3 ORIGIN FOR THE GROUP (A): -1.7180 20.1140 24.5160 REMARK 3 T TENSOR REMARK 3 T11: .1287 T22: -.2373 REMARK 3 T33: -.0509 T12: .1371 REMARK 3 T13: .0175 T23: .1208 REMARK 3 L TENSOR REMARK 3 L11: 13.3249 L22: 15.8240 REMARK 3 L33: 13.8971 L12: 1.1066 REMARK 3 L13: -1.0343 L23: -.8511 REMARK 3 S TENSOR REMARK 3 S11: .2213 S12: .4776 S13: .5335 REMARK 3 S21: -1.0725 S22: .0764 S23: -.7864 REMARK 3 S31: -.9049 S32: .0609 S33: -.2977 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 85 REMARK 3 ORIGIN FOR THE GROUP (A): -33.8740 20.5600 .5110 REMARK 3 T TENSOR REMARK 3 T11: .2141 T22: -.3411 REMARK 3 T33: .1349 T12: -.0298 REMARK 3 T13: .1615 T23: -.0514 REMARK 3 L TENSOR REMARK 3 L11: 7.9441 L22: 18.0921 REMARK 3 L33: 14.2108 L12: 1.9030 REMARK 3 L13: -3.7506 L23: -.1965 REMARK 3 S TENSOR REMARK 3 S11: .5857 S12: .5311 S13: .6455 REMARK 3 S21: .9201 S22: -.2060 S23: .8478 REMARK 3 S31: -1.1551 S32: -.5039 S33: -.3797 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 12 C 83 REMARK 3 ORIGIN FOR THE GROUP (A): -9.2500 40.8070 -.4330 REMARK 3 T TENSOR REMARK 3 T11: .3811 T22: -.4111 REMARK 3 T33: .0879 T12: .1541 REMARK 3 T13: .0226 T23: .1543 REMARK 3 L TENSOR REMARK 3 L11: 15.3267 L22: 13.8595 REMARK 3 L33: 12.6950 L12: 2.0622 REMARK 3 L13: -4.0775 L23: .3398 REMARK 3 S TENSOR REMARK 3 S11: .3200 S12: .1282 S13: -.2745 REMARK 3 S21: -.0664 S22: -.2167 S23: -.5398 REMARK 3 S31: .5183 S32: .1070 S33: -.1033 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 13 D 83 REMARK 3 ORIGIN FOR THE GROUP (A): -24.8150 40.5320 30.1040 REMARK 3 T TENSOR REMARK 3 T11: .2987 T22: -.2129 REMARK 3 T33: .2599 T12: -.1682 REMARK 3 T13: -.0506 T23: -.0217 REMARK 3 L TENSOR REMARK 3 L11: 10.1811 L22: 23.2138 REMARK 3 L33: 8.6428 L12: -3.2268 REMARK 3 L13: -4.6738 L23: 1.1845 REMARK 3 S TENSOR REMARK 3 S11: -.4505 S12: -.4447 S13: -.5873 REMARK 3 S21: .4180 S22: .0050 S23: 1.0187 REMARK 3 S31: .4382 S32: .0838 S33: .4455 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Y 3 Y 10 REMARK 3 ORIGIN FOR THE GROUP (A): -14.8240 31.0330 25.8860 REMARK 3 T TENSOR REMARK 3 T11: .7359 T22: -.0038 REMARK 3 T33: .5847 T12: -.0723 REMARK 3 T13: .3048 T23: -.0865 REMARK 3 L TENSOR REMARK 3 L11: 17.7750 L22: .9496 REMARK 3 L33: 5.3912 L12: .2182 REMARK 3 L13: .7072 L23: -2.2449 REMARK 3 S TENSOR REMARK 3 S11: -.5604 S12: 1.3628 S13: -.9948 REMARK 3 S21: .1909 S22: .2244 S23: .3255 REMARK 3 S31: -.1100 S32: -.6817 S33: .3360 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Z 3 Z 10 REMARK 3 ORIGIN FOR THE GROUP (A): -20.6560 30.5050 -.1980 REMARK 3 T TENSOR REMARK 3 T11: .4861 T22: -.1728 REMARK 3 T33: .3613 T12: -.0820 REMARK 3 T13: .2613 T23: .2210 REMARK 3 L TENSOR REMARK 3 L11: 29.8925 L22: 3.4795 REMARK 3 L33: 6.4246 L12: 2.1671 REMARK 3 L13: 7.1760 L23: .9217 REMARK 3 S TENSOR REMARK 3 S11: .3640 S12: -.7958 S13: -.3951 REMARK 3 S21: -.0614 S22: .0410 S23: -.0290 REMARK 3 S31: -.2840 S32: .1911 S33: -.4050 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZTG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1000033098. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : OSMIC REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7978 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.65800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1EC6 (WITH OLIGONUCLEOTIDE REMOVED) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CACODYLATE, MPD, MAGNESIUM ACETATE, REMARK 280 NACL, EDTA, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 310K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.40000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 12 REMARK 465 SER A 85 REMARK 465 ASN C 84 REMARK 465 SER C 85 REMARK 465 GLY D 12 REMARK 465 ASN D 84 REMARK 465 SER D 85 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS C 32 CE LYS C 32 NZ 0.263 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC Y 4 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT Y 6 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DC Y 8 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DC Y 9 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DT Y 10 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DC Z 3 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT Z 6 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC Z 7 O4' - C1' - N1 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT Z 10 O4' - C1' - N1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 29 57.15 -113.25 REMARK 500 LYS A 31 109.05 -40.26 REMARK 500 LYS A 32 -9.40 103.46 REMARK 500 ARG A 38 -70.22 -76.53 REMARK 500 ASN A 53 71.53 -58.61 REMARK 500 GLU A 81 30.66 -86.04 REMARK 500 ILE C 29 68.95 -106.48 REMARK 500 LYS C 32 -46.17 73.59 REMARK 500 ASN C 53 18.02 58.79 REMARK 500 ILE C 76 -38.87 -39.08 REMARK 500 GLU C 81 7.51 -69.21 REMARK 500 LYS D 31 -169.91 67.35 REMARK 500 LYS D 32 -41.42 -28.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY C 52 ASN C 53 32.54 REMARK 500 REMARK 500 REMARK: NULL DBREF 1ZTG A 14 85 UNP Q15365 PCBP1_HUMAN 14 85 DBREF 1ZTG B 14 85 UNP Q15365 PCBP1_HUMAN 14 85 DBREF 1ZTG C 14 85 UNP Q15365 PCBP1_HUMAN 14 85 DBREF 1ZTG D 14 85 UNP Q15365 PCBP1_HUMAN 14 85 DBREF 1ZTG Y 3 10 PDB 1ZTG 1ZTG 3 10 DBREF 1ZTG Z 3 10 PDB 1ZTG 1ZTG 3 10 SEQADV 1ZTG GLY A 12 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG ILE A 13 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG GLY B 12 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG ILE B 13 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG GLY C 12 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG ILE C 13 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG GLY D 12 UNP Q15365 EXPRESSION TAG SEQADV 1ZTG ILE D 13 UNP Q15365 EXPRESSION TAG SEQRES 1 A 74 GLY ILE LEU THR ILE ARG LEU LEU MET HIS GLY LYS GLU SEQRES 2 A 74 VAL GLY SER ILE ILE GLY LYS LYS GLY GLU SER VAL LYS SEQRES 3 A 74 ARG ILE ARG GLU GLU SER GLY ALA ARG ILE ASN ILE SER SEQRES 4 A 74 GLU GLY ASN CYS PRO GLU ARG ILE ILE THR LEU THR GLY SEQRES 5 A 74 PRO THR ASN ALA ILE PHE LYS ALA PHE ALA MET ILE ILE SEQRES 6 A 74 ASP LYS LEU GLU GLU ASP ILE ASN SER SEQRES 1 B 74 GLY ILE LEU THR ILE ARG LEU LEU MET HIS GLY LYS GLU SEQRES 2 B 74 VAL GLY SER ILE ILE GLY LYS LYS GLY GLU SER VAL LYS SEQRES 3 B 74 ARG ILE ARG GLU GLU SER GLY ALA ARG ILE ASN ILE SER SEQRES 4 B 74 GLU GLY ASN CYS PRO GLU ARG ILE ILE THR LEU THR GLY SEQRES 5 B 74 PRO THR ASN ALA ILE PHE LYS ALA PHE ALA MET ILE ILE SEQRES 6 B 74 ASP LYS LEU GLU GLU ASP ILE ASN SER SEQRES 1 C 74 GLY ILE LEU THR ILE ARG LEU LEU MET HIS GLY LYS GLU SEQRES 2 C 74 VAL GLY SER ILE ILE GLY LYS LYS GLY GLU SER VAL LYS SEQRES 3 C 74 ARG ILE ARG GLU GLU SER GLY ALA ARG ILE ASN ILE SER SEQRES 4 C 74 GLU GLY ASN CYS PRO GLU ARG ILE ILE THR LEU THR GLY SEQRES 5 C 74 PRO THR ASN ALA ILE PHE LYS ALA PHE ALA MET ILE ILE SEQRES 6 C 74 ASP LYS LEU GLU GLU ASP ILE ASN SER SEQRES 1 D 74 GLY ILE LEU THR ILE ARG LEU LEU MET HIS GLY LYS GLU SEQRES 2 D 74 VAL GLY SER ILE ILE GLY LYS LYS GLY GLU SER VAL LYS SEQRES 3 D 74 ARG ILE ARG GLU GLU SER GLY ALA ARG ILE ASN ILE SER SEQRES 4 D 74 GLU GLY ASN CYS PRO GLU ARG ILE ILE THR LEU THR GLY SEQRES 5 D 74 PRO THR ASN ALA ILE PHE LYS ALA PHE ALA MET ILE ILE SEQRES 6 D 74 ASP LYS LEU GLU GLU ASP ILE ASN SER SEQRES 1 Y 8 DC DC DC DT DC DC DC DT SEQRES 1 Z 8 DC DC DC DT DC DC DC DT HELIX 1 1 GLY A 22 ILE A 29 1 8 HELIX 2 2 GLY A 33 GLY A 44 1 12 HELIX 3 3 PRO A 64 GLU A 81 1 18 HELIX 4 4 GLY B 22 GLY B 30 1 9 HELIX 5 5 GLY B 33 GLY B 44 1 12 HELIX 6 6 PRO B 64 GLU B 81 1 18 HELIX 7 7 LYS C 23 ILE C 29 1 7 HELIX 8 8 GLY C 33 GLY C 44 1 12 HELIX 9 9 PRO C 64 GLU C 81 1 18 HELIX 10 10 GLY D 22 ILE D 29 1 8 HELIX 11 11 GLY D 33 GLY D 44 1 12 HELIX 12 12 PRO D 64 GLU D 81 1 18 SHEET 1 A 3 LEU A 14 HIS A 21 0 SHEET 2 A 3 GLU A 56 GLY A 63 -1 O GLY A 63 N LEU A 14 SHEET 3 A 3 ARG A 46 ILE A 49 -1 N ARG A 46 O THR A 62 SHEET 1 B 3 LEU B 14 HIS B 21 0 SHEET 2 B 3 GLU B 56 GLY B 63 -1 O ARG B 57 N MET B 20 SHEET 3 B 3 ARG B 46 ILE B 49 -1 N ASN B 48 O THR B 60 SHEET 1 C 3 LEU C 14 HIS C 21 0 SHEET 2 C 3 GLU C 56 GLY C 63 -1 O LEU C 61 N ILE C 16 SHEET 3 C 3 ARG C 46 ILE C 49 -1 N ARG C 46 O THR C 62 SHEET 1 D 3 LEU D 14 HIS D 21 0 SHEET 2 D 3 GLU D 56 GLY D 63 -1 O GLY D 63 N LEU D 14 SHEET 3 D 3 ARG D 46 ILE D 49 -1 N ARG D 46 O THR D 62 SSBOND 1 CYS A 54 CYS B 54 1555 1656 2.84 SSBOND 2 CYS C 54 CYS D 54 1555 1555 2.04 CISPEP 1 ILE A 83 ASN A 84 0 -8.06 CISPEP 2 GLY B 12 ILE B 13 0 -2.10 CISPEP 3 ASP D 82 ILE D 83 0 2.06 CRYST1 45.600 76.800 61.400 90.00 111.70 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021914 0.000000 0.008732 0.00000 SCALE2 0.000000 0.013025 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017523 0.00000