HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 06-JUN-05 1ZWY TITLE CRYSTAL STRUCTURE OF PROTEIN VC0702 FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL UPF0244 PROTEIN VC0702; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) DERIVATIVES; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG KEYWDS HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,R.WU,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (MCSG) REVDAT 7 16-OCT-24 1ZWY 1 SEQADV LINK REVDAT 6 31-JAN-18 1ZWY 1 REMARK REVDAT 5 13-JUL-11 1ZWY 1 VERSN REVDAT 4 24-FEB-09 1ZWY 1 VERSN REVDAT 3 19-DEC-06 1ZWY 1 TITLE DBREF SEQADV JRNL REVDAT 2 20-SEP-05 1ZWY 1 AUTHOR JRNL REVDAT 1 19-JUL-05 1ZWY 0 JRNL AUTH C.CHANG,R.WU,S.MOY,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PROTEIN VC0702 FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 59238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3176 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4196 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5428 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 567 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.17000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 0.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.57000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.547 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5617 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7621 ; 1.481 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 706 ; 5.685 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 270 ;37.168 ;24.074 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 980 ;16.314 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;22.916 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 844 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4297 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2752 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3835 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 537 ; 0.163 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 75 ; 0.185 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.211 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3593 ; 1.143 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5627 ; 1.573 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2286 ; 3.078 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1982 ; 4.390 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1ZWY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1000033214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97970 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63342 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, MLPHARE, DM, SOLVE, RESOLVE, CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000, HEPES, NACL, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 395K, TEMPERATURE 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 52.67350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 ILE A 4 REMARK 465 ILE A 5 REMARK 465 LYS A 6 REMARK 465 ARG A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 127 REMARK 465 THR A 139 REMARK 465 GLU A 140 REMARK 465 ASN A 141 REMARK 465 ILE A 142 REMARK 465 LYS A 143 REMARK 465 GLN A 144 REMARK 465 LYS A 145 REMARK 465 SER A 182 REMARK 465 ALA A 183 REMARK 465 ARG B 124 REMARK 465 GLN B 125 REMARK 465 ALA B 126 REMARK 465 LYS B 127 REMARK 465 ALA B 183 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 MSE C 1 REMARK 465 PRO C 2 REMARK 465 PRO C 3 REMARK 465 ILE C 4 REMARK 465 ILE C 5 REMARK 465 LYS C 6 REMARK 465 ARG C 7 REMARK 465 ARG C 8 REMARK 465 GLN C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 MSE D 1 REMARK 465 PRO D 2 REMARK 465 PRO D 3 REMARK 465 ILE D 4 REMARK 465 ILE D 5 REMARK 465 LYS D 6 REMARK 465 ARG D 7 REMARK 465 ARG D 8 REMARK 465 VAL D 9 REMARK 465 ALA D 183 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 181 CG CD REMARK 470 ASN B -1 CG OD1 ND2 REMARK 470 SER D 182 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 243 O HOH B 294 2.10 REMARK 500 NH1 ARG C 159 O HOH C 192 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 181 N - CA - CB ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 11 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 MSE B 97 CG - SE - CE ANGL. DEV. = -14.4 DEGREES REMARK 500 ARG C 105 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 90 -125.80 55.92 REMARK 500 SER B 17 147.92 -172.96 REMARK 500 GLU B 90 -119.40 44.66 REMARK 500 HIS B 155 -5.33 76.38 REMARK 500 MSE C 10 136.72 161.92 REMARK 500 SER C 17 146.87 178.01 REMARK 500 GLU C 90 -116.88 53.24 REMARK 500 GLU D 90 -120.68 53.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC26370 RELATED DB: TARGETDB DBREF 1ZWY A 1 183 UNP Q9KU27 Y702_VIBCH 1 183 DBREF 1ZWY B 1 183 UNP Q9KU27 Y702_VIBCH 1 183 DBREF 1ZWY C 1 183 UNP Q9KU27 Y702_VIBCH 1 183 DBREF 1ZWY D 1 183 UNP Q9KU27 Y702_VIBCH 1 183 SEQADV 1ZWY ASN A -1 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY ALA A 0 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY MSE A 1 UNP Q9KU27 MET 1 MODIFIED RESIDUE SEQADV 1ZWY MSE A 10 UNP Q9KU27 MET 10 MODIFIED RESIDUE SEQADV 1ZWY MSE A 55 UNP Q9KU27 MET 55 MODIFIED RESIDUE SEQADV 1ZWY MSE A 97 UNP Q9KU27 MET 97 MODIFIED RESIDUE SEQADV 1ZWY MSE A 114 UNP Q9KU27 MET 114 MODIFIED RESIDUE SEQADV 1ZWY MSE A 133 UNP Q9KU27 MET 133 MODIFIED RESIDUE SEQADV 1ZWY ASN B -1 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY ALA B 0 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY MSE B 1 UNP Q9KU27 MET 1 MODIFIED RESIDUE SEQADV 1ZWY MSE B 10 UNP Q9KU27 MET 10 MODIFIED RESIDUE SEQADV 1ZWY MSE B 55 UNP Q9KU27 MET 55 MODIFIED RESIDUE SEQADV 1ZWY MSE B 97 UNP Q9KU27 MET 97 MODIFIED RESIDUE SEQADV 1ZWY MSE B 114 UNP Q9KU27 MET 114 MODIFIED RESIDUE SEQADV 1ZWY MSE B 133 UNP Q9KU27 MET 133 MODIFIED RESIDUE SEQADV 1ZWY ASN C -1 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY ALA C 0 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY MSE C 1 UNP Q9KU27 MET 1 MODIFIED RESIDUE SEQADV 1ZWY MSE C 10 UNP Q9KU27 MET 10 MODIFIED RESIDUE SEQADV 1ZWY MSE C 55 UNP Q9KU27 MET 55 MODIFIED RESIDUE SEQADV 1ZWY MSE C 97 UNP Q9KU27 MET 97 MODIFIED RESIDUE SEQADV 1ZWY MSE C 114 UNP Q9KU27 MET 114 MODIFIED RESIDUE SEQADV 1ZWY MSE C 133 UNP Q9KU27 MET 133 MODIFIED RESIDUE SEQADV 1ZWY ASN D -1 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY ALA D 0 UNP Q9KU27 CLONING ARTIFACT SEQADV 1ZWY MSE D 1 UNP Q9KU27 MET 1 MODIFIED RESIDUE SEQADV 1ZWY MSE D 10 UNP Q9KU27 MET 10 MODIFIED RESIDUE SEQADV 1ZWY MSE D 55 UNP Q9KU27 MET 55 MODIFIED RESIDUE SEQADV 1ZWY MSE D 97 UNP Q9KU27 MET 97 MODIFIED RESIDUE SEQADV 1ZWY MSE D 114 UNP Q9KU27 MET 114 MODIFIED RESIDUE SEQADV 1ZWY MSE D 133 UNP Q9KU27 MET 133 MODIFIED RESIDUE SEQRES 1 A 185 ASN ALA MSE PRO PRO ILE ILE LYS ARG ARG VAL MSE ARG SEQRES 2 A 185 LYS ILE ILE ILE ALA SER GLN ASN PRO ALA LYS VAL ASN SEQRES 3 A 185 ALA VAL ARG SER ALA PHE SER THR VAL PHE PRO ASP GLN SEQRES 4 A 185 GLU TRP GLU PHE ILE GLY VAL SER VAL PRO SER GLU VAL SEQRES 5 A 185 ALA ASP GLN PRO MSE SER ASP GLU GLU THR LYS GLN GLY SEQRES 6 A 185 ALA LEU ASN ARG VAL ARG ASN ALA LYS GLN ARG HIS PRO SEQRES 7 A 185 GLY ALA GLU TYR TYR VAL GLY LEU GLU ALA GLY ILE GLU SEQRES 8 A 185 GLU ASN LYS THR PHE ALA TRP MSE ILE VAL GLU SER ASP SEQRES 9 A 185 GLN GLN ARG GLY GLU SER ARG SER ALA CYS LEU MSE LEU SEQRES 10 A 185 PRO PRO LEU VAL LEU GLU ARG LEU ARG GLN ALA LYS GLU SEQRES 11 A 185 LEU GLY ASP VAL MSE ASP GLU VAL PHE GLY THR GLU ASN SEQRES 12 A 185 ILE LYS GLN LYS GLY GLY ALA ILE GLY LEU LEU THR ARG SEQRES 13 A 185 HIS HIS LEU THR ARG SER THR VAL TYR HIS GLN ALA LEU SEQRES 14 A 185 ILE LEU ALA LEU ILE PRO PHE ILE ASN PRO GLU HIS TYR SEQRES 15 A 185 PRO SER ALA SEQRES 1 B 185 ASN ALA MSE PRO PRO ILE ILE LYS ARG ARG VAL MSE ARG SEQRES 2 B 185 LYS ILE ILE ILE ALA SER GLN ASN PRO ALA LYS VAL ASN SEQRES 3 B 185 ALA VAL ARG SER ALA PHE SER THR VAL PHE PRO ASP GLN SEQRES 4 B 185 GLU TRP GLU PHE ILE GLY VAL SER VAL PRO SER GLU VAL SEQRES 5 B 185 ALA ASP GLN PRO MSE SER ASP GLU GLU THR LYS GLN GLY SEQRES 6 B 185 ALA LEU ASN ARG VAL ARG ASN ALA LYS GLN ARG HIS PRO SEQRES 7 B 185 GLY ALA GLU TYR TYR VAL GLY LEU GLU ALA GLY ILE GLU SEQRES 8 B 185 GLU ASN LYS THR PHE ALA TRP MSE ILE VAL GLU SER ASP SEQRES 9 B 185 GLN GLN ARG GLY GLU SER ARG SER ALA CYS LEU MSE LEU SEQRES 10 B 185 PRO PRO LEU VAL LEU GLU ARG LEU ARG GLN ALA LYS GLU SEQRES 11 B 185 LEU GLY ASP VAL MSE ASP GLU VAL PHE GLY THR GLU ASN SEQRES 12 B 185 ILE LYS GLN LYS GLY GLY ALA ILE GLY LEU LEU THR ARG SEQRES 13 B 185 HIS HIS LEU THR ARG SER THR VAL TYR HIS GLN ALA LEU SEQRES 14 B 185 ILE LEU ALA LEU ILE PRO PHE ILE ASN PRO GLU HIS TYR SEQRES 15 B 185 PRO SER ALA SEQRES 1 C 185 ASN ALA MSE PRO PRO ILE ILE LYS ARG ARG VAL MSE ARG SEQRES 2 C 185 LYS ILE ILE ILE ALA SER GLN ASN PRO ALA LYS VAL ASN SEQRES 3 C 185 ALA VAL ARG SER ALA PHE SER THR VAL PHE PRO ASP GLN SEQRES 4 C 185 GLU TRP GLU PHE ILE GLY VAL SER VAL PRO SER GLU VAL SEQRES 5 C 185 ALA ASP GLN PRO MSE SER ASP GLU GLU THR LYS GLN GLY SEQRES 6 C 185 ALA LEU ASN ARG VAL ARG ASN ALA LYS GLN ARG HIS PRO SEQRES 7 C 185 GLY ALA GLU TYR TYR VAL GLY LEU GLU ALA GLY ILE GLU SEQRES 8 C 185 GLU ASN LYS THR PHE ALA TRP MSE ILE VAL GLU SER ASP SEQRES 9 C 185 GLN GLN ARG GLY GLU SER ARG SER ALA CYS LEU MSE LEU SEQRES 10 C 185 PRO PRO LEU VAL LEU GLU ARG LEU ARG GLN ALA LYS GLU SEQRES 11 C 185 LEU GLY ASP VAL MSE ASP GLU VAL PHE GLY THR GLU ASN SEQRES 12 C 185 ILE LYS GLN LYS GLY GLY ALA ILE GLY LEU LEU THR ARG SEQRES 13 C 185 HIS HIS LEU THR ARG SER THR VAL TYR HIS GLN ALA LEU SEQRES 14 C 185 ILE LEU ALA LEU ILE PRO PHE ILE ASN PRO GLU HIS TYR SEQRES 15 C 185 PRO SER ALA SEQRES 1 D 185 ASN ALA MSE PRO PRO ILE ILE LYS ARG ARG VAL MSE ARG SEQRES 2 D 185 LYS ILE ILE ILE ALA SER GLN ASN PRO ALA LYS VAL ASN SEQRES 3 D 185 ALA VAL ARG SER ALA PHE SER THR VAL PHE PRO ASP GLN SEQRES 4 D 185 GLU TRP GLU PHE ILE GLY VAL SER VAL PRO SER GLU VAL SEQRES 5 D 185 ALA ASP GLN PRO MSE SER ASP GLU GLU THR LYS GLN GLY SEQRES 6 D 185 ALA LEU ASN ARG VAL ARG ASN ALA LYS GLN ARG HIS PRO SEQRES 7 D 185 GLY ALA GLU TYR TYR VAL GLY LEU GLU ALA GLY ILE GLU SEQRES 8 D 185 GLU ASN LYS THR PHE ALA TRP MSE ILE VAL GLU SER ASP SEQRES 9 D 185 GLN GLN ARG GLY GLU SER ARG SER ALA CYS LEU MSE LEU SEQRES 10 D 185 PRO PRO LEU VAL LEU GLU ARG LEU ARG GLN ALA LYS GLU SEQRES 11 D 185 LEU GLY ASP VAL MSE ASP GLU VAL PHE GLY THR GLU ASN SEQRES 12 D 185 ILE LYS GLN LYS GLY GLY ALA ILE GLY LEU LEU THR ARG SEQRES 13 D 185 HIS HIS LEU THR ARG SER THR VAL TYR HIS GLN ALA LEU SEQRES 14 D 185 ILE LEU ALA LEU ILE PRO PHE ILE ASN PRO GLU HIS TYR SEQRES 15 D 185 PRO SER ALA MODRES 1ZWY MSE A 10 MET SELENOMETHIONINE MODRES 1ZWY MSE A 55 MET SELENOMETHIONINE MODRES 1ZWY MSE A 97 MET SELENOMETHIONINE MODRES 1ZWY MSE A 114 MET SELENOMETHIONINE MODRES 1ZWY MSE A 133 MET SELENOMETHIONINE MODRES 1ZWY MSE B 1 MET SELENOMETHIONINE MODRES 1ZWY MSE B 10 MET SELENOMETHIONINE MODRES 1ZWY MSE B 55 MET SELENOMETHIONINE MODRES 1ZWY MSE B 97 MET SELENOMETHIONINE MODRES 1ZWY MSE B 114 MET SELENOMETHIONINE MODRES 1ZWY MSE B 133 MET SELENOMETHIONINE MODRES 1ZWY MSE C 10 MET SELENOMETHIONINE MODRES 1ZWY MSE C 55 MET SELENOMETHIONINE MODRES 1ZWY MSE C 97 MET SELENOMETHIONINE MODRES 1ZWY MSE C 114 MET SELENOMETHIONINE MODRES 1ZWY MSE C 133 MET SELENOMETHIONINE MODRES 1ZWY MSE D 10 MET SELENOMETHIONINE MODRES 1ZWY MSE D 55 MET SELENOMETHIONINE MODRES 1ZWY MSE D 97 MET SELENOMETHIONINE MODRES 1ZWY MSE D 114 MET SELENOMETHIONINE MODRES 1ZWY MSE D 133 MET SELENOMETHIONINE HET MSE A 10 8 HET MSE A 55 8 HET MSE A 97 8 HET MSE A 114 8 HET MSE A 133 8 HET MSE B 1 8 HET MSE B 10 8 HET MSE B 55 8 HET MSE B 97 8 HET MSE B 114 8 HET MSE B 133 8 HET MSE C 10 8 HET MSE C 55 8 HET MSE C 97 8 HET MSE C 114 8 HET MSE C 133 8 HET MSE D 10 8 HET MSE D 55 8 HET MSE D 97 8 HET MSE D 114 8 HET MSE D 133 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 21(C5 H11 N O2 SE) FORMUL 5 HOH *567(H2 O) HELIX 1 1 ASN A 19 PHE A 34 1 16 HELIX 2 2 SER A 56 HIS A 75 1 20 HELIX 3 3 PRO A 116 ARG A 124 1 9 HELIX 4 4 GLU A 128 GLY A 138 1 11 HELIX 5 5 GLY A 146 THR A 153 1 8 HELIX 6 6 THR A 158 LEU A 171 1 14 HELIX 7 7 LEU A 171 ASN A 176 1 6 HELIX 8 8 PRO A 177 TYR A 180 5 4 HELIX 9 9 PRO B 3 ARG B 7 5 5 HELIX 10 10 ASN B 19 PHE B 34 1 16 HELIX 11 11 SER B 56 HIS B 75 1 20 HELIX 12 12 PRO B 116 LEU B 123 1 8 HELIX 13 13 GLU B 128 GLY B 138 1 11 HELIX 14 14 GLY B 138 LYS B 145 1 8 HELIX 15 15 GLY B 147 THR B 153 1 7 HELIX 16 16 THR B 158 LEU B 171 1 14 HELIX 17 17 LEU B 171 ASN B 176 1 6 HELIX 18 18 PRO B 177 TYR B 180 5 4 HELIX 19 19 ASN C 19 PHE C 34 1 16 HELIX 20 20 SER C 56 HIS C 75 1 20 HELIX 21 21 PRO C 116 ARG C 124 1 9 HELIX 22 22 GLU C 128 GLY C 138 1 11 HELIX 23 23 GLY C 138 LYS C 145 1 8 HELIX 24 24 GLY C 146 THR C 153 1 8 HELIX 25 25 THR C 158 LEU C 171 1 14 HELIX 26 26 LEU C 171 ASN C 176 1 6 HELIX 27 27 ASN D 19 PHE D 34 1 16 HELIX 28 28 SER D 56 HIS D 75 1 20 HELIX 29 29 PRO D 116 ARG D 124 1 9 HELIX 30 30 GLU D 128 GLY D 138 1 11 HELIX 31 31 GLY D 138 LYS D 145 1 8 HELIX 32 32 GLY D 147 THR D 153 1 7 HELIX 33 33 THR D 158 LEU D 171 1 14 HELIX 34 34 LEU D 171 ASN D 176 1 6 SHEET 1 A 5 GLU A 40 GLY A 43 0 SHEET 2 A 5 LYS A 12 ILE A 15 1 N ILE A 13 O ILE A 42 SHEET 3 A 5 TYR A 80 GLU A 89 1 O VAL A 82 N ILE A 14 SHEET 4 A 5 LYS A 92 GLU A 100 -1 O ILE A 98 N GLY A 83 SHEET 5 A 5 ARG A 105 ARG A 109 -1 O SER A 108 N MSE A 97 SHEET 1 B 5 GLU A 40 GLY A 43 0 SHEET 2 B 5 LYS A 12 ILE A 15 1 N ILE A 13 O ILE A 42 SHEET 3 B 5 TYR A 80 GLU A 89 1 O VAL A 82 N ILE A 14 SHEET 4 B 5 LYS A 92 GLU A 100 -1 O ILE A 98 N GLY A 83 SHEET 5 B 5 LEU A 113 MSE A 114 -1 O LEU A 113 N THR A 93 SHEET 1 C 5 TRP B 39 GLY B 43 0 SHEET 2 C 5 ARG B 11 ILE B 15 1 N ILE B 13 O ILE B 42 SHEET 3 C 5 TYR B 80 GLU B 89 1 O TYR B 80 N ILE B 14 SHEET 4 C 5 LYS B 92 GLU B 100 -1 O GLU B 100 N TYR B 81 SHEET 5 C 5 ARG B 105 ARG B 109 -1 O GLY B 106 N VAL B 99 SHEET 1 D 5 TRP B 39 GLY B 43 0 SHEET 2 D 5 ARG B 11 ILE B 15 1 N ILE B 13 O ILE B 42 SHEET 3 D 5 TYR B 80 GLU B 89 1 O TYR B 80 N ILE B 14 SHEET 4 D 5 LYS B 92 GLU B 100 -1 O GLU B 100 N TYR B 81 SHEET 5 D 5 LEU B 113 MSE B 114 -1 O LEU B 113 N THR B 93 SHEET 1 E 5 TRP C 39 GLY C 43 0 SHEET 2 E 5 ARG C 11 ILE C 15 1 N ILE C 13 O ILE C 42 SHEET 3 E 5 TYR C 80 GLU C 89 1 O VAL C 82 N ILE C 14 SHEET 4 E 5 LYS C 92 GLU C 100 -1 O ILE C 98 N GLY C 83 SHEET 5 E 5 ARG C 105 ARG C 109 -1 O SER C 108 N MSE C 97 SHEET 1 F 5 TRP C 39 GLY C 43 0 SHEET 2 F 5 ARG C 11 ILE C 15 1 N ILE C 13 O ILE C 42 SHEET 3 F 5 TYR C 80 GLU C 89 1 O VAL C 82 N ILE C 14 SHEET 4 F 5 LYS C 92 GLU C 100 -1 O ILE C 98 N GLY C 83 SHEET 5 F 5 LEU C 113 MSE C 114 -1 O LEU C 113 N THR C 93 SHEET 1 G 5 TRP D 39 GLY D 43 0 SHEET 2 G 5 ARG D 11 ILE D 15 1 N ARG D 11 O GLU D 40 SHEET 3 G 5 TYR D 80 GLU D 89 1 O TYR D 80 N ILE D 14 SHEET 4 G 5 LYS D 92 GLU D 100 -1 O GLU D 100 N TYR D 81 SHEET 5 G 5 ARG D 105 ARG D 109 -1 O SER D 108 N MSE D 97 SHEET 1 H 5 TRP D 39 GLY D 43 0 SHEET 2 H 5 ARG D 11 ILE D 15 1 N ARG D 11 O GLU D 40 SHEET 3 H 5 TYR D 80 GLU D 89 1 O TYR D 80 N ILE D 14 SHEET 4 H 5 LYS D 92 GLU D 100 -1 O GLU D 100 N TYR D 81 SHEET 5 H 5 LEU D 113 MSE D 114 -1 O LEU D 113 N THR D 93 LINK C VAL A 9 N MSE A 10 1555 1555 1.33 LINK C MSE A 10 N ARG A 11 1555 1555 1.33 LINK C PRO A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N SER A 56 1555 1555 1.34 LINK C TRP A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N ILE A 98 1555 1555 1.33 LINK C LEU A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N LEU A 115 1555 1555 1.32 LINK C VAL A 132 N MSE A 133 1555 1555 1.34 LINK C MSE A 133 N ASP A 134 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N PRO B 2 1555 1555 1.37 LINK C VAL B 9 N MSE B 10 1555 1555 1.33 LINK C MSE B 10 N ARG B 11 1555 1555 1.32 LINK C PRO B 54 N MSE B 55 1555 1555 1.33 LINK C MSE B 55 N SER B 56 1555 1555 1.32 LINK C TRP B 96 N MSE B 97 1555 1555 1.34 LINK C MSE B 97 N ILE B 98 1555 1555 1.32 LINK C LEU B 113 N MSE B 114 1555 1555 1.34 LINK C MSE B 114 N LEU B 115 1555 1555 1.32 LINK C VAL B 132 N MSE B 133 1555 1555 1.33 LINK C MSE B 133 N ASP B 134 1555 1555 1.33 LINK C VAL C 9 N MSE C 10 1555 1555 1.34 LINK C MSE C 10 N ARG C 11 1555 1555 1.33 LINK C PRO C 54 N MSE C 55 1555 1555 1.34 LINK C MSE C 55 N SER C 56 1555 1555 1.34 LINK C TRP C 96 N MSE C 97 1555 1555 1.33 LINK C MSE C 97 N ILE C 98 1555 1555 1.33 LINK C LEU C 113 N MSE C 114 1555 1555 1.32 LINK C MSE C 114 N LEU C 115 1555 1555 1.34 LINK C VAL C 132 N MSE C 133 1555 1555 1.35 LINK C MSE C 133 N ASP C 134 1555 1555 1.33 LINK C MSE D 10 N ARG D 11 1555 1555 1.34 LINK C PRO D 54 N MSE D 55 1555 1555 1.34 LINK C MSE D 55 N SER D 56 1555 1555 1.33 LINK C TRP D 96 N MSE D 97 1555 1555 1.34 LINK C MSE D 97 N ILE D 98 1555 1555 1.33 LINK C LEU D 113 N MSE D 114 1555 1555 1.33 LINK C MSE D 114 N LEU D 115 1555 1555 1.33 LINK C VAL D 132 N MSE D 133 1555 1555 1.33 LINK C MSE D 133 N ASP D 134 1555 1555 1.33 CRYST1 53.399 105.347 75.272 90.00 104.57 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018727 0.000000 0.004866 0.00000 SCALE2 0.000000 0.009492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013726 0.00000