data_1A0A # _entry.id 1A0A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1A0A pdb_00001a0a 10.2210/pdb1a0a/pdb RCSB PDT046 ? ? WWPDB D_1000170232 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-03-18 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1A0A _pdbx_database_status.recvd_initial_deposition_date 1997-11-27 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shimizu, T.' 1 'Toumoto, A.' 2 'Ihara, K.' 3 'Shimizu, M.' 4 'Kyogoku, Y.' 5 'Ogawa, N.' 6 'Oshima, Y.' 7 'Hakoshima, T.' 8 # _citation.id primary _citation.title 'Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 16 _citation.page_first 4689 _citation.page_last 4697 _citation.year 1997 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9303313 _citation.pdbx_database_id_DOI 10.1093/emboj/16.15.4689 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shimizu, T.' 1 ? primary 'Toumoto, A.' 2 ? primary 'Ihara, K.' 3 ? primary 'Shimizu, M.' 4 ? primary 'Kyogoku, Y.' 5 ? primary 'Ogawa, N.' 6 ? primary 'Oshima, Y.' 7 ? primary 'Hakoshima, T.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*TP*CP*AP*CP*AP*CP*GP*TP*GP*GP*GP*AP*CP*TP*AP*G )-3') ; 5212.386 1 ? ? 'UPSTREAM ACTIVATION SITE P2' ? 2 polymer syn ;DNA (5'-D(*CP*TP*AP*GP*TP*CP*CP*CP*AP*CP*GP*TP*GP*TP*GP*AP*G )-3') ; 5203.373 1 ? ? 'UPSTREAM ACTIVATION SITE P2' ? 3 polymer man 'PROTEIN (PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4)' 7104.062 2 ? ? 'DNA BINDING DOMAIN' ? 4 water nat water 18.015 80 ? ? ? ? # loop_ _entity_keywords.entity_id _entity_keywords.text 1 'FRAGMENT UPSTREAM ACTIVATION SITE P2' 2 'FRAGMENT: UPSTREAM ACTIVATION SITE P2' 3 'FRAGMENT: DNA BINDING DOMAIN' # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'UASP2(17)' 2 'UASP2(17)' 3 BHLH # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DT)(DC)(DA)(DC)(DA)(DC)(DG)(DT)(DG)(DG)(DG)(DA)(DC)(DT)(DA)(DG)' CTCACACGTGGGACTAG C ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DA)(DG)(DT)(DC)(DC)(DC)(DA)(DC)(DG)(DT)(DG)(DT)(DG)(DA)(DG)' CTAGTCCCACGTGTGAG D ? 3 'polypeptide(L)' no no MKRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGST MKRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGST A,B ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 DC n 1 4 DA n 1 5 DC n 1 6 DA n 1 7 DC n 1 8 DG n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DG n 1 13 DA n 1 14 DC n 1 15 DT n 1 16 DA n 1 17 DG n 2 1 DC n 2 2 DT n 2 3 DA n 2 4 DG n 2 5 DT n 2 6 DC n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DC n 2 11 DG n 2 12 DT n 2 13 DG n 2 14 DT n 2 15 DG n 2 16 DA n 2 17 DG n 3 1 MET n 3 2 LYS n 3 3 ARG n 3 4 GLU n 3 5 SER n 3 6 HIS n 3 7 LYS n 3 8 HIS n 3 9 ALA n 3 10 GLU n 3 11 GLN n 3 12 ALA n 3 13 ARG n 3 14 ARG n 3 15 ASN n 3 16 ARG n 3 17 LEU n 3 18 ALA n 3 19 VAL n 3 20 ALA n 3 21 LEU n 3 22 HIS n 3 23 GLU n 3 24 LEU n 3 25 ALA n 3 26 SER n 3 27 LEU n 3 28 ILE n 3 29 PRO n 3 30 ALA n 3 31 GLU n 3 32 TRP n 3 33 LYS n 3 34 GLN n 3 35 GLN n 3 36 ASN n 3 37 VAL n 3 38 SER n 3 39 ALA n 3 40 ALA n 3 41 PRO n 3 42 SER n 3 43 LYS n 3 44 ALA n 3 45 THR n 3 46 THR n 3 47 VAL n 3 48 GLU n 3 49 ALA n 3 50 ALA n 3 51 CYS n 3 52 ARG n 3 53 TYR n 3 54 ILE n 3 55 ARG n 3 56 HIS n 3 57 LEU n 3 58 GLN n 3 59 GLN n 3 60 ASN n 3 61 GLY n 3 62 SER n 3 63 THR n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C C . n A 1 2 DT 2 2 2 DT T C . n A 1 3 DC 3 3 3 DC C C . n A 1 4 DA 4 4 4 DA A C . n A 1 5 DC 5 5 5 DC C C . n A 1 6 DA 6 6 6 DA A C . n A 1 7 DC 7 7 7 DC C C . n A 1 8 DG 8 8 8 DG G C . n A 1 9 DT 9 9 9 DT T C . n A 1 10 DG 10 10 10 DG G C . n A 1 11 DG 11 11 11 DG G C . n A 1 12 DG 12 12 12 DG G C . n A 1 13 DA 13 13 13 DA A C . n A 1 14 DC 14 14 14 DC C C . n A 1 15 DT 15 15 15 DT T C . n A 1 16 DA 16 16 16 DA A C . n A 1 17 DG 17 17 17 DG G C . n B 2 1 DC 1 1 1 DC C D . n B 2 2 DT 2 2 2 DT T D . n B 2 3 DA 3 3 3 DA A D . n B 2 4 DG 4 4 4 DG G D . n B 2 5 DT 5 5 5 DT T D . n B 2 6 DC 6 6 6 DC C D . n B 2 7 DC 7 7 7 DC C D . n B 2 8 DC 8 8 8 DC C D . n B 2 9 DA 9 9 9 DA A D . n B 2 10 DC 10 10 10 DC C D . n B 2 11 DG 11 11 11 DG G D . n B 2 12 DT 12 12 12 DT T D . n B 2 13 DG 13 13 13 DG G D . n B 2 14 DT 14 14 14 DT T D . n B 2 15 DG 15 15 15 DG G D . n B 2 16 DA 16 16 16 DA A D . n B 2 17 DG 17 17 17 DG G D . n C 3 1 MET 1 0 0 MET MET A . n C 3 2 LYS 2 1 1 LYS LYS A . n C 3 3 ARG 3 2 2 ARG ARG A . n C 3 4 GLU 4 3 3 GLU GLU A . n C 3 5 SER 5 4 4 SER SER A . n C 3 6 HIS 6 5 5 HIS HIS A . n C 3 7 LYS 7 6 6 LYS LYS A . n C 3 8 HIS 8 7 7 HIS HIS A . n C 3 9 ALA 9 8 8 ALA ALA A . n C 3 10 GLU 10 9 9 GLU GLU A . n C 3 11 GLN 11 10 10 GLN GLN A . n C 3 12 ALA 12 11 11 ALA ALA A . n C 3 13 ARG 13 12 12 ARG ARG A . n C 3 14 ARG 14 13 13 ARG ARG A . n C 3 15 ASN 15 14 14 ASN ASN A . n C 3 16 ARG 16 15 15 ARG ARG A . n C 3 17 LEU 17 16 16 LEU LEU A . n C 3 18 ALA 18 17 17 ALA ALA A . n C 3 19 VAL 19 18 18 VAL VAL A . n C 3 20 ALA 20 19 19 ALA ALA A . n C 3 21 LEU 21 20 20 LEU LEU A . n C 3 22 HIS 22 21 21 HIS HIS A . n C 3 23 GLU 23 22 22 GLU GLU A . n C 3 24 LEU 24 23 23 LEU LEU A . n C 3 25 ALA 25 24 24 ALA ALA A . n C 3 26 SER 26 25 25 SER SER A . n C 3 27 LEU 27 26 26 LEU LEU A . n C 3 28 ILE 28 27 27 ILE ILE A . n C 3 29 PRO 29 28 28 PRO PRO A . n C 3 30 ALA 30 29 29 ALA ALA A . n C 3 31 GLU 31 30 30 GLU GLU A . n C 3 32 TRP 32 31 31 TRP TRP A . n C 3 33 LYS 33 32 32 LYS LYS A . n C 3 34 GLN 34 33 33 GLN GLN A . n C 3 35 GLN 35 34 34 GLN GLN A . n C 3 36 ASN 36 35 35 ASN ASN A . n C 3 37 VAL 37 36 36 VAL VAL A . n C 3 38 SER 38 37 37 SER SER A . n C 3 39 ALA 39 38 38 ALA ALA A . n C 3 40 ALA 40 39 39 ALA ALA A . n C 3 41 PRO 41 40 40 PRO PRO A . n C 3 42 SER 42 41 41 SER SER A . n C 3 43 LYS 43 42 42 LYS LYS A . n C 3 44 ALA 44 43 43 ALA ALA A . n C 3 45 THR 45 44 44 THR THR A . n C 3 46 THR 46 45 45 THR THR A . n C 3 47 VAL 47 46 46 VAL VAL A . n C 3 48 GLU 48 47 47 GLU GLU A . n C 3 49 ALA 49 48 48 ALA ALA A . n C 3 50 ALA 50 49 49 ALA ALA A . n C 3 51 CYS 51 50 50 CYS CYS A . n C 3 52 ARG 52 51 51 ARG ARG A . n C 3 53 TYR 53 52 52 TYR TYR A . n C 3 54 ILE 54 53 53 ILE ILE A . n C 3 55 ARG 55 54 54 ARG ARG A . n C 3 56 HIS 56 55 55 HIS HIS A . n C 3 57 LEU 57 56 56 LEU LEU A . n C 3 58 GLN 58 57 57 GLN GLN A . n C 3 59 GLN 59 58 58 GLN GLN A . n C 3 60 ASN 60 59 59 ASN ASN A . n C 3 61 GLY 61 60 60 GLY GLY A . n C 3 62 SER 62 61 61 SER SER A . n C 3 63 THR 63 62 62 THR THR A . n D 3 1 MET 1 0 0 MET MET B . n D 3 2 LYS 2 1 1 LYS LYS B . n D 3 3 ARG 3 2 2 ARG ARG B . n D 3 4 GLU 4 3 3 GLU GLU B . n D 3 5 SER 5 4 4 SER SER B . n D 3 6 HIS 6 5 5 HIS HIS B . n D 3 7 LYS 7 6 6 LYS LYS B . n D 3 8 HIS 8 7 7 HIS HIS B . n D 3 9 ALA 9 8 8 ALA ALA B . n D 3 10 GLU 10 9 9 GLU GLU B . n D 3 11 GLN 11 10 10 GLN GLN B . n D 3 12 ALA 12 11 11 ALA ALA B . n D 3 13 ARG 13 12 12 ARG ARG B . n D 3 14 ARG 14 13 13 ARG ARG B . n D 3 15 ASN 15 14 14 ASN ASN B . n D 3 16 ARG 16 15 15 ARG ARG B . n D 3 17 LEU 17 16 16 LEU LEU B . n D 3 18 ALA 18 17 17 ALA ALA B . n D 3 19 VAL 19 18 18 VAL VAL B . n D 3 20 ALA 20 19 19 ALA ALA B . n D 3 21 LEU 21 20 20 LEU LEU B . n D 3 22 HIS 22 21 21 HIS HIS B . n D 3 23 GLU 23 22 22 GLU GLU B . n D 3 24 LEU 24 23 23 LEU LEU B . n D 3 25 ALA 25 24 24 ALA ALA B . n D 3 26 SER 26 25 25 SER SER B . n D 3 27 LEU 27 26 26 LEU LEU B . n D 3 28 ILE 28 27 27 ILE ILE B . n D 3 29 PRO 29 28 28 PRO PRO B . n D 3 30 ALA 30 29 29 ALA ALA B . n D 3 31 GLU 31 30 30 GLU GLU B . n D 3 32 TRP 32 31 31 TRP TRP B . n D 3 33 LYS 33 32 32 LYS LYS B . n D 3 34 GLN 34 33 33 GLN GLN B . n D 3 35 GLN 35 34 34 GLN GLN B . n D 3 36 ASN 36 35 35 ASN ASN B . n D 3 37 VAL 37 36 36 VAL VAL B . n D 3 38 SER 38 37 37 SER SER B . n D 3 39 ALA 39 38 38 ALA ALA B . n D 3 40 ALA 40 39 39 ALA ALA B . n D 3 41 PRO 41 40 40 PRO PRO B . n D 3 42 SER 42 41 41 SER SER B . n D 3 43 LYS 43 42 42 LYS LYS B . n D 3 44 ALA 44 43 43 ALA ALA B . n D 3 45 THR 45 44 44 THR THR B . n D 3 46 THR 46 45 45 THR THR B . n D 3 47 VAL 47 46 46 VAL VAL B . n D 3 48 GLU 48 47 47 GLU GLU B . n D 3 49 ALA 49 48 48 ALA ALA B . n D 3 50 ALA 50 49 49 ALA ALA B . n D 3 51 CYS 51 50 50 CYS CYS B . n D 3 52 ARG 52 51 51 ARG ARG B . n D 3 53 TYR 53 52 52 TYR TYR B . n D 3 54 ILE 54 53 53 ILE ILE B . n D 3 55 ARG 55 54 54 ARG ARG B . n D 3 56 HIS 56 55 55 HIS HIS B . n D 3 57 LEU 57 56 56 LEU LEU B . n D 3 58 GLN 58 57 57 GLN GLN B . n D 3 59 GLN 59 58 58 GLN GLN B . n D 3 60 ASN 60 59 59 ASN ASN B . n D 3 61 GLY 61 60 60 GLY GLY B . n D 3 62 SER 62 61 61 SER SER B . n D 3 63 THR 63 62 62 THR THR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 18 1 HOH HOH C . E 4 HOH 2 19 2 HOH HOH C . E 4 HOH 3 20 10 HOH HOH C . E 4 HOH 4 21 11 HOH HOH C . E 4 HOH 5 22 22 HOH HOH C . E 4 HOH 6 23 25 HOH HOH C . E 4 HOH 7 24 34 HOH HOH C . E 4 HOH 8 25 38 HOH HOH C . E 4 HOH 9 26 42 HOH HOH C . E 4 HOH 10 27 44 HOH HOH C . E 4 HOH 11 28 48 HOH HOH C . E 4 HOH 12 29 49 HOH HOH C . E 4 HOH 13 30 52 HOH HOH C . E 4 HOH 14 31 55 HOH HOH C . E 4 HOH 15 32 56 HOH HOH C . E 4 HOH 16 33 65 HOH HOH C . E 4 HOH 17 34 66 HOH HOH C . E 4 HOH 18 35 72 HOH HOH C . F 4 HOH 1 18 3 HOH HOH D . F 4 HOH 2 19 6 HOH HOH D . F 4 HOH 3 20 15 HOH HOH D . F 4 HOH 4 21 18 HOH HOH D . F 4 HOH 5 22 23 HOH HOH D . F 4 HOH 6 23 35 HOH HOH D . F 4 HOH 7 24 36 HOH HOH D . F 4 HOH 8 25 37 HOH HOH D . F 4 HOH 9 26 40 HOH HOH D . F 4 HOH 10 27 41 HOH HOH D . F 4 HOH 11 28 43 HOH HOH D . F 4 HOH 12 29 45 HOH HOH D . F 4 HOH 13 30 47 HOH HOH D . F 4 HOH 14 31 50 HOH HOH D . F 4 HOH 15 32 57 HOH HOH D . F 4 HOH 16 33 58 HOH HOH D . F 4 HOH 17 34 59 HOH HOH D . F 4 HOH 18 35 60 HOH HOH D . F 4 HOH 19 36 71 HOH HOH D . F 4 HOH 20 37 73 HOH HOH D . F 4 HOH 21 38 75 HOH HOH D . F 4 HOH 22 39 77 HOH HOH D . F 4 HOH 23 40 78 HOH HOH D . G 4 HOH 1 63 5 HOH HOH A . G 4 HOH 2 64 7 HOH HOH A . G 4 HOH 3 65 8 HOH HOH A . G 4 HOH 4 66 13 HOH HOH A . G 4 HOH 5 67 14 HOH HOH A . G 4 HOH 6 68 16 HOH HOH A . G 4 HOH 7 69 17 HOH HOH A . G 4 HOH 8 70 19 HOH HOH A . G 4 HOH 9 71 20 HOH HOH A . G 4 HOH 10 72 21 HOH HOH A . G 4 HOH 11 73 26 HOH HOH A . G 4 HOH 12 74 28 HOH HOH A . G 4 HOH 13 75 32 HOH HOH A . G 4 HOH 14 76 33 HOH HOH A . G 4 HOH 15 77 39 HOH HOH A . G 4 HOH 16 78 51 HOH HOH A . G 4 HOH 17 79 61 HOH HOH A . G 4 HOH 18 80 67 HOH HOH A . G 4 HOH 19 81 68 HOH HOH A . G 4 HOH 20 82 70 HOH HOH A . G 4 HOH 21 83 74 HOH HOH A . G 4 HOH 22 84 79 HOH HOH A . G 4 HOH 23 85 80 HOH HOH A . H 4 HOH 1 63 4 HOH HOH B . H 4 HOH 2 64 9 HOH HOH B . H 4 HOH 3 65 12 HOH HOH B . H 4 HOH 4 66 24 HOH HOH B . H 4 HOH 5 67 27 HOH HOH B . H 4 HOH 6 68 29 HOH HOH B . H 4 HOH 7 69 30 HOH HOH B . H 4 HOH 8 70 31 HOH HOH B . H 4 HOH 9 71 46 HOH HOH B . H 4 HOH 10 72 53 HOH HOH B . H 4 HOH 11 73 54 HOH HOH B . H 4 HOH 12 74 62 HOH HOH B . H 4 HOH 13 75 63 HOH HOH B . H 4 HOH 14 76 64 HOH HOH B . H 4 HOH 15 77 69 HOH HOH B . H 4 HOH 16 78 76 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 X-PLOR refinement 3.1 ? 2 WEIS 'data reduction' . ? 3 CCP4 'data scaling' '(SCALA)' ? 4 # _cell.entry_id 1A0A _cell.length_a 53.510 _cell.length_b 68.300 _cell.length_c 108.770 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A0A _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1A0A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.20 _exptl_crystal.density_percent_sol 71.0000 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.6 _exptl_crystal_grow.pdbx_details ;VAPOR DIFFUSION METHOD: DROP-0.4MM PROTEIN, 0.2MM DNA, 1% PEG6K, 20MM NACITRATE (PH3.6), RESERVOIR-1% PEG6K, 20MM NACITRATE(PH3.6), vapor diffusion ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 6000' ? ? ? 1 2 1 'NA CITRATE' ? ? ? 1 3 2 'PEG 6000' ? ? ? 1 4 2 'NA CITRATE' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 288.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type WEISSENBERG _diffrn_detector.pdbx_collection_date 1996-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-18B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1A0A _reflns.observed_criterion_sigma_I 1.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.800 _reflns.number_obs 9398 _reflns.number_all ? _reflns.percent_possible_obs 92.000 _reflns.pdbx_Rmerge_I_obs 0.0870000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.2000 _reflns.B_iso_Wilson_estimate 26.20 _reflns.pdbx_redundancy 3.900 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.800 _reflns_shell.d_res_low 2.950 _reflns_shell.percent_possible_all 80.40 _reflns_shell.Rmerge_I_obs 0.2020000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.500 _reflns_shell.pdbx_redundancy 1.900 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1A0A _refine.ls_number_reflns_obs 7581 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.000 _refine.pdbx_data_cutoff_high_absF 1000000.000 _refine.pdbx_data_cutoff_low_absF 0.0010 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs 77.300 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2300000 _refine.ls_R_factor_R_free 0.2840000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 12.500 _refine.ls_number_reflns_R_free 948 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 28.40 _refine.aniso_B[1][1] -0.560 _refine.aniso_B[2][2] 3.9000 _refine.aniso_B[3][3] -3.340 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 996 _refine_hist.pdbx_number_atoms_nucleic_acid 691 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 80 _refine_hist.number_atoms_total 1767 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.42 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.78 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.92 _refine_ls_shell.number_reflns_R_work 569 _refine_ls_shell.R_factor_R_work 0.2570000 _refine_ls_shell.percent_reflns_obs 54.90 _refine_ls_shell.R_factor_R_free 0.3190000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 13.10 _refine_ls_shell.number_reflns_R_free 86 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM_NDBX.DNAE TOP_NDBX.DNA 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1A0A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1A0A _struct.title 'PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4/DNA COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1A0A _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'TRANSCRIPTION FACTOR, BASIC HELIX LOOP HELIX, COMPLEX (TRANSCRIPTION FACTOR-DNA), TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PHO4_YEAST 3 P07270 ? ? ? 2 PDB 1A0A 1 1A0A ? ? ? 3 PDB 1A0A 2 1A0A ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1A0A A 1 ? 63 ? P07270 250 ? 312 ? 0 62 2 1 1A0A B 1 ? 63 ? P07270 250 ? 312 ? 0 62 3 2 1A0A C 1 ? 17 ? 1A0A 1 ? 17 ? 1 17 4 3 1A0A D 1 ? 17 ? 1A0A 1 ? 17 ? 1 17 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1A0A MET A 1 ? UNP P07270 ASP 250 conflict 0 1 1 1A0A ALA A 20 ? UNP P07270 PRO 269 conflict 19 2 2 1A0A MET B 1 ? UNP P07270 ASP 250 conflict 0 3 2 1A0A ALA B 20 ? UNP P07270 PRO 269 conflict 19 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1A GLU C 4 ? ALA C 9 ? GLU A 3 ALA A 8 5 ? 6 HELX_P HELX_P2 H11 GLU C 10 ? LEU C 27 ? GLU A 9 LEU A 26 1 ? 18 HELX_P HELX_P3 HA PRO C 29 ? GLN C 34 ? PRO A 28 GLN A 33 1 ? 6 HELX_P HELX_P4 H2A ALA C 44 ? GLN C 58 ? ALA A 43 GLN A 57 1 ? 15 HELX_P HELX_P5 H1B LYS D 2 ? LEU D 27 ? LYS B 1 LEU B 26 5 ? 26 HELX_P HELX_P6 HB ALA D 30 ? GLN D 34 ? ALA B 29 GLN B 33 5 ? 5 HELX_P HELX_P7 H2B LYS D 43 ? GLN D 58 ? LYS B 42 GLN B 57 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 1 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 1 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 1 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 16 N1 ? ? C DT 2 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 16 N6 ? ? C DT 2 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 15 N1 ? ? C DC 3 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 15 O6 ? ? C DC 3 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 15 N2 ? ? C DC 3 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 4 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 4 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DT 12 O4 ? ? C DC 5 D DT 12 1_555 ? ? ? ? ? ? 'DC-DT MISPAIR' ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 13 N1 ? ? C DC 5 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 13 O6 ? ? C DC 5 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 13 N2 ? ? C DC 5 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 6 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 6 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 11 N1 ? ? C DC 7 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 11 O6 ? ? C DC 7 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 11 N2 ? ? C DC 7 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 8 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 8 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 8 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 9 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 9 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 8 N3 ? ? C DG 10 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 8 O2 ? ? C DG 10 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 8 N4 ? ? C DG 10 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 7 N3 ? ? C DG 11 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 7 O2 ? ? C DG 11 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 7 N4 ? ? C DG 11 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 12 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 12 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 12 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 13 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 13 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 4 N1 ? ? C DC 14 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 4 O6 ? ? C DC 14 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 4 N2 ? ? C DC 14 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 15 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 15 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 2 N3 ? ? C DA 16 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 2 O4 ? ? C DA 16 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 17 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 17 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 17 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" C DG 12 ? ? "C2'" C DG 12 ? ? "C1'" C DG 12 ? ? 96.38 102.40 -6.02 0.80 N 2 1 N9 D DG 4 ? ? "C1'" D DG 4 ? ? "C2'" D DG 4 ? ? 95.61 112.60 -16.99 1.90 N 3 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 111.32 108.30 3.02 0.30 N 4 1 N1 D DT 5 ? ? "C1'" D DT 5 ? ? "C2'" D DT 5 ? ? 93.53 112.60 -19.07 1.90 N 5 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? N1 D DT 5 ? ? 110.71 108.30 2.41 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 1 ? ? -71.23 25.90 2 1 ARG A 2 ? ? -60.57 31.12 3 1 GLU A 3 ? ? -164.97 -54.69 4 1 LYS A 6 ? ? 7.81 -78.17 5 1 GLU A 9 ? ? -73.15 -80.42 6 1 LYS A 32 ? ? -17.07 -34.58 7 1 ALA A 39 ? ? 150.62 150.94 8 1 LYS A 42 ? ? -76.79 41.90 9 1 ALA A 43 ? ? -169.31 -53.53 10 1 HIS A 55 ? ? -71.63 -72.09 11 1 LEU A 56 ? ? -29.48 -30.43 12 1 GLN A 57 ? ? -52.93 -77.21 13 1 LYS B 1 ? ? -51.56 10.47 14 1 HIS B 5 ? ? -38.77 -25.15 15 1 LYS B 6 ? ? -78.05 -74.16 16 1 HIS B 7 ? ? -39.80 -34.75 17 1 ALA B 8 ? ? -80.25 -73.47 18 1 GLU B 9 ? ? -55.07 9.39 19 1 LEU B 16 ? ? -46.55 -19.47 20 1 ALA B 17 ? ? -93.87 -64.82 21 1 ALA B 19 ? ? -64.19 -71.36 22 1 LEU B 20 ? ? -39.50 -35.70 23 1 GLU B 22 ? ? -67.44 20.96 24 1 LEU B 23 ? ? -103.33 -68.91 25 1 SER B 25 ? ? -39.71 -26.98 26 1 LEU B 26 ? ? -154.05 31.89 27 1 ALA B 29 ? ? -60.32 88.93 28 1 ASN B 35 ? ? -175.00 -178.70 29 1 VAL B 36 ? ? -33.06 -17.82 30 1 SER B 37 ? ? -20.18 98.16 31 1 ALA B 39 ? ? 172.13 120.19 32 1 SER B 41 ? ? -169.62 -60.68 33 1 LYS B 42 ? ? -125.77 -122.08 34 1 ALA B 43 ? ? -1.51 -73.61 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PRO N N N N 393 PRO CA C N S 394 PRO C C N N 395 PRO O O N N 396 PRO CB C N N 397 PRO CG C N N 398 PRO CD C N N 399 PRO OXT O N N 400 PRO H H N N 401 PRO HA H N N 402 PRO HB2 H N N 403 PRO HB3 H N N 404 PRO HG2 H N N 405 PRO HG3 H N N 406 PRO HD2 H N N 407 PRO HD3 H N N 408 PRO HXT H N N 409 SER N N N N 410 SER CA C N S 411 SER C C N N 412 SER O O N N 413 SER CB C N N 414 SER OG O N N 415 SER OXT O N N 416 SER H H N N 417 SER H2 H N N 418 SER HA H N N 419 SER HB2 H N N 420 SER HB3 H N N 421 SER HG H N N 422 SER HXT H N N 423 THR N N N N 424 THR CA C N S 425 THR C C N N 426 THR O O N N 427 THR CB C N R 428 THR OG1 O N N 429 THR CG2 C N N 430 THR OXT O N N 431 THR H H N N 432 THR H2 H N N 433 THR HA H N N 434 THR HB H N N 435 THR HG1 H N N 436 THR HG21 H N N 437 THR HG22 H N N 438 THR HG23 H N N 439 THR HXT H N N 440 TRP N N N N 441 TRP CA C N S 442 TRP C C N N 443 TRP O O N N 444 TRP CB C N N 445 TRP CG C Y N 446 TRP CD1 C Y N 447 TRP CD2 C Y N 448 TRP NE1 N Y N 449 TRP CE2 C Y N 450 TRP CE3 C Y N 451 TRP CZ2 C Y N 452 TRP CZ3 C Y N 453 TRP CH2 C Y N 454 TRP OXT O N N 455 TRP H H N N 456 TRP H2 H N N 457 TRP HA H N N 458 TRP HB2 H N N 459 TRP HB3 H N N 460 TRP HD1 H N N 461 TRP HE1 H N N 462 TRP HE3 H N N 463 TRP HZ2 H N N 464 TRP HZ3 H N N 465 TRP HH2 H N N 466 TRP HXT H N N 467 TYR N N N N 468 TYR CA C N S 469 TYR C C N N 470 TYR O O N N 471 TYR CB C N N 472 TYR CG C Y N 473 TYR CD1 C Y N 474 TYR CD2 C Y N 475 TYR CE1 C Y N 476 TYR CE2 C Y N 477 TYR CZ C Y N 478 TYR OH O N N 479 TYR OXT O N N 480 TYR H H N N 481 TYR H2 H N N 482 TYR HA H N N 483 TYR HB2 H N N 484 TYR HB3 H N N 485 TYR HD1 H N N 486 TYR HD2 H N N 487 TYR HE1 H N N 488 TYR HE2 H N N 489 TYR HH H N N 490 TYR HXT H N N 491 VAL N N N N 492 VAL CA C N S 493 VAL C C N N 494 VAL O O N N 495 VAL CB C N N 496 VAL CG1 C N N 497 VAL CG2 C N N 498 VAL OXT O N N 499 VAL H H N N 500 VAL H2 H N N 501 VAL HA H N N 502 VAL HB H N N 503 VAL HG11 H N N 504 VAL HG12 H N N 505 VAL HG13 H N N 506 VAL HG21 H N N 507 VAL HG22 H N N 508 VAL HG23 H N N 509 VAL HXT H N N 510 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PRO N CA sing N N 386 PRO N CD sing N N 387 PRO N H sing N N 388 PRO CA C sing N N 389 PRO CA CB sing N N 390 PRO CA HA sing N N 391 PRO C O doub N N 392 PRO C OXT sing N N 393 PRO CB CG sing N N 394 PRO CB HB2 sing N N 395 PRO CB HB3 sing N N 396 PRO CG CD sing N N 397 PRO CG HG2 sing N N 398 PRO CG HG3 sing N N 399 PRO CD HD2 sing N N 400 PRO CD HD3 sing N N 401 PRO OXT HXT sing N N 402 SER N CA sing N N 403 SER N H sing N N 404 SER N H2 sing N N 405 SER CA C sing N N 406 SER CA CB sing N N 407 SER CA HA sing N N 408 SER C O doub N N 409 SER C OXT sing N N 410 SER CB OG sing N N 411 SER CB HB2 sing N N 412 SER CB HB3 sing N N 413 SER OG HG sing N N 414 SER OXT HXT sing N N 415 THR N CA sing N N 416 THR N H sing N N 417 THR N H2 sing N N 418 THR CA C sing N N 419 THR CA CB sing N N 420 THR CA HA sing N N 421 THR C O doub N N 422 THR C OXT sing N N 423 THR CB OG1 sing N N 424 THR CB CG2 sing N N 425 THR CB HB sing N N 426 THR OG1 HG1 sing N N 427 THR CG2 HG21 sing N N 428 THR CG2 HG22 sing N N 429 THR CG2 HG23 sing N N 430 THR OXT HXT sing N N 431 TRP N CA sing N N 432 TRP N H sing N N 433 TRP N H2 sing N N 434 TRP CA C sing N N 435 TRP CA CB sing N N 436 TRP CA HA sing N N 437 TRP C O doub N N 438 TRP C OXT sing N N 439 TRP CB CG sing N N 440 TRP CB HB2 sing N N 441 TRP CB HB3 sing N N 442 TRP CG CD1 doub Y N 443 TRP CG CD2 sing Y N 444 TRP CD1 NE1 sing Y N 445 TRP CD1 HD1 sing N N 446 TRP CD2 CE2 doub Y N 447 TRP CD2 CE3 sing Y N 448 TRP NE1 CE2 sing Y N 449 TRP NE1 HE1 sing N N 450 TRP CE2 CZ2 sing Y N 451 TRP CE3 CZ3 doub Y N 452 TRP CE3 HE3 sing N N 453 TRP CZ2 CH2 doub Y N 454 TRP CZ2 HZ2 sing N N 455 TRP CZ3 CH2 sing Y N 456 TRP CZ3 HZ3 sing N N 457 TRP CH2 HH2 sing N N 458 TRP OXT HXT sing N N 459 TYR N CA sing N N 460 TYR N H sing N N 461 TYR N H2 sing N N 462 TYR CA C sing N N 463 TYR CA CB sing N N 464 TYR CA HA sing N N 465 TYR C O doub N N 466 TYR C OXT sing N N 467 TYR CB CG sing N N 468 TYR CB HB2 sing N N 469 TYR CB HB3 sing N N 470 TYR CG CD1 doub Y N 471 TYR CG CD2 sing Y N 472 TYR CD1 CE1 sing Y N 473 TYR CD1 HD1 sing N N 474 TYR CD2 CE2 doub Y N 475 TYR CD2 HD2 sing N N 476 TYR CE1 CZ doub Y N 477 TYR CE1 HE1 sing N N 478 TYR CE2 CZ sing Y N 479 TYR CE2 HE2 sing N N 480 TYR CZ OH sing N N 481 TYR OH HH sing N N 482 TYR OXT HXT sing N N 483 VAL N CA sing N N 484 VAL N H sing N N 485 VAL N H2 sing N N 486 VAL CA C sing N N 487 VAL CA CB sing N N 488 VAL CA HA sing N N 489 VAL C O doub N N 490 VAL C OXT sing N N 491 VAL CB CG1 sing N N 492 VAL CB CG2 sing N N 493 VAL CB HB sing N N 494 VAL CG1 HG11 sing N N 495 VAL CG1 HG12 sing N N 496 VAL CG1 HG13 sing N N 497 VAL CG2 HG21 sing N N 498 VAL CG2 HG22 sing N N 499 VAL CG2 HG23 sing N N 500 VAL OXT HXT sing N N 501 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1A0A 'double helix' 1A0A 'b-form double helix' 1A0A 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 17 1_555 0.244 -0.520 -1.690 22.992 0.407 0.642 1 C_DC1:DG17_D C 1 ? D 17 ? 19 1 1 A DT 2 1_555 B DA 16 1_555 0.146 -0.073 -0.845 8.118 6.146 -5.751 2 C_DT2:DA16_D C 2 ? D 16 ? 20 1 1 A DC 3 1_555 B DG 15 1_555 0.598 -0.262 -0.003 -0.013 0.021 -0.703 3 C_DC3:DG15_D C 3 ? D 15 ? 19 1 1 A DA 4 1_555 B DT 14 1_555 -0.170 -0.276 -0.022 0.014 -0.042 -10.728 4 C_DA4:DT14_D C 4 ? D 14 ? 20 1 1 A DC 5 1_555 B DG 13 1_555 0.276 -0.237 0.349 -7.880 -12.571 -0.262 5 C_DC5:DG13_D C 5 ? D 13 ? 19 1 1 A DA 6 1_555 B DT 12 1_555 -0.009 -0.438 -0.002 9.451 0.762 11.096 6 C_DA6:DT12_D C 6 ? D 12 ? 20 1 1 A DC 7 1_555 B DG 11 1_555 -0.084 -0.082 -0.151 9.409 15.254 3.509 7 C_DC7:DG11_D C 7 ? D 11 ? 19 1 1 A DG 8 1_555 B DC 10 1_555 0.288 -0.252 0.010 -5.625 23.220 0.806 8 C_DG8:DC10_D C 8 ? D 10 ? 19 1 1 A DT 9 1_555 B DA 9 1_555 -0.215 -0.264 0.377 -13.488 6.776 8.061 9 C_DT9:DA9_D C 9 ? D 9 ? 20 1 1 A DG 10 1_555 B DC 8 1_555 -0.215 0.315 -0.266 4.064 1.266 -0.945 10 C_DG10:DC8_D C 10 ? D 8 ? 19 1 1 A DG 11 1_555 B DC 7 1_555 -0.088 -0.152 -0.036 14.093 6.558 0.364 11 C_DG11:DC7_D C 11 ? D 7 ? 19 1 1 A DG 12 1_555 B DC 6 1_555 0.263 -0.366 -0.017 -0.024 0.303 -5.332 12 C_DG12:DC6_D C 12 ? D 6 ? 19 1 1 A DA 13 1_555 B DT 5 1_555 0.224 0.045 -0.036 0.450 1.477 -11.020 13 C_DA13:DT5_D C 13 ? D 5 ? 20 1 1 A DC 14 1_555 B DG 4 1_555 -0.091 0.104 0.012 -0.318 0.531 0.894 14 C_DC14:DG4_D C 14 ? D 4 ? 19 1 1 A DT 15 1_555 B DA 3 1_555 -0.105 0.070 0.271 1.274 10.999 1.423 15 C_DT15:DA3_D C 15 ? D 3 ? 20 1 1 A DA 16 1_555 B DT 2 1_555 0.416 0.055 0.566 -12.979 23.357 5.635 16 C_DA16:DT2_D C 16 ? D 2 ? 20 1 1 A DG 17 1_555 B DC 1 1_555 -0.035 -0.057 -0.320 -14.894 4.512 1.092 17 C_DG17:DC1_D C 17 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 17 1_555 A DT 2 1_555 B DA 16 1_555 0.431 0.636 3.898 4.217 13.398 27.881 -2.008 0.203 3.822 25.834 -8.131 31.156 1 CC_DC1DT2:DA16DG17_DD C 1 ? D 17 ? C 2 ? D 16 ? 1 A DT 2 1_555 B DA 16 1_555 A DC 3 1_555 B DG 15 1_555 0.617 -1.033 3.328 0.285 22.681 36.009 -3.609 -0.827 2.316 32.977 -0.414 42.357 2 CC_DT2DC3:DG15DA16_DD C 2 ? D 16 ? C 3 ? D 15 ? 1 A DC 3 1_555 B DG 15 1_555 A DA 4 1_555 B DT 14 1_555 0.160 0.277 2.592 0.328 9.783 26.193 -1.309 -0.269 2.530 20.691 -0.693 27.932 3 CC_DC3DA4:DT14DG15_DD C 3 ? D 15 ? C 4 ? D 14 ? 1 A DA 4 1_555 B DT 14 1_555 A DC 5 1_555 B DG 13 1_555 0.165 -1.233 4.856 1.663 -0.956 31.355 -2.010 0.159 4.893 -1.767 -3.073 31.412 4 CC_DA4DC5:DG13DT14_DD C 4 ? D 14 ? C 5 ? D 13 ? 1 A DC 5 1_555 B DG 13 1_555 A DA 6 1_555 B DT 12 1_555 0.978 2.160 2.446 -2.587 -2.834 37.599 3.596 -1.748 2.213 -4.384 4.001 37.787 5 CC_DC5DA6:DT12DG13_DD C 5 ? D 13 ? C 6 ? D 12 ? 1 A DA 6 1_555 B DT 12 1_555 A DC 7 1_555 B DG 11 1_555 -0.986 -0.605 3.085 3.083 7.368 37.339 -1.777 1.865 2.832 11.350 -4.749 38.154 6 CC_DA6DC7:DG11DT12_DD C 6 ? D 12 ? C 7 ? D 11 ? 1 A DC 7 1_555 B DG 11 1_555 A DG 8 1_555 B DC 10 1_555 0.003 0.106 4.907 -2.790 13.358 37.967 -2.133 -0.482 4.672 19.769 4.128 40.260 7 CC_DC7DG8:DC10DG11_DD C 7 ? D 11 ? C 8 ? D 10 ? 1 A DG 8 1_555 B DC 10 1_555 A DT 9 1_555 B DA 9 1_555 0.734 -0.307 3.365 -1.893 -1.492 32.225 -0.280 -1.662 3.328 -2.684 3.405 32.313 8 CC_DG8DT9:DA9DC10_DD C 8 ? D 10 ? C 9 ? D 9 ? 1 A DT 9 1_555 B DA 9 1_555 A DG 10 1_555 B DC 8 1_555 -0.826 0.526 2.666 6.787 -4.175 25.444 1.984 3.161 2.260 -9.195 -14.949 26.643 9 CC_DT9DG10:DC8DA9_DD C 9 ? D 9 ? C 10 ? D 8 ? 1 A DG 10 1_555 B DC 8 1_555 A DG 11 1_555 B DC 7 1_555 1.882 -1.170 2.837 -1.440 10.916 29.588 -3.766 -3.676 2.186 20.502 2.704 31.528 10 CC_DG10DG11:DC7DC8_DD C 10 ? D 8 ? C 11 ? D 7 ? 1 A DG 11 1_555 B DC 7 1_555 A DG 12 1_555 B DC 6 1_555 -2.067 1.048 3.474 -3.518 20.025 30.490 -1.647 2.716 3.671 33.775 5.933 36.513 11 CC_DG11DG12:DC6DC7_DD C 11 ? D 7 ? C 12 ? D 6 ? 1 A DG 12 1_555 B DC 6 1_555 A DA 13 1_555 B DT 5 1_555 -1.784 -1.038 3.341 -14.986 10.598 39.086 -2.553 0.824 3.399 14.884 21.047 43.029 12 CC_DG12DA13:DT5DC6_DD C 12 ? D 6 ? C 13 ? D 5 ? 1 A DA 13 1_555 B DT 5 1_555 A DC 14 1_555 B DG 4 1_555 0.476 -1.732 3.448 -3.484 -0.763 26.924 -3.488 -1.937 3.408 -1.630 7.441 27.155 13 CC_DA13DC14:DG4DT5_DD C 13 ? D 5 ? C 14 ? D 4 ? 1 A DC 14 1_555 B DG 4 1_555 A DT 15 1_555 B DA 3 1_555 0.680 -0.306 3.386 0.351 -15.781 34.754 1.657 -0.995 3.229 -24.892 -0.554 38.070 14 CC_DC14DT15:DA3DG4_DD C 14 ? D 4 ? C 15 ? D 3 ? 1 A DT 15 1_555 B DA 3 1_555 A DA 16 1_555 B DT 2 1_555 -0.346 -0.265 3.451 -2.707 13.631 36.486 -2.129 0.176 3.173 20.864 4.143 38.959 15 CC_DT15DA16:DT2DA3_DD C 15 ? D 3 ? C 16 ? D 2 ? 1 A DA 16 1_555 B DT 2 1_555 A DG 17 1_555 B DC 1 1_555 -0.012 -1.532 3.700 8.235 -0.459 32.370 -2.581 1.571 3.609 -0.807 -14.480 33.377 16 CC_DA16DG17:DC1DT2_DD C 16 ? D 2 ? C 17 ? D 1 ? # _atom_sites.entry_id 1A0A _atom_sites.fract_transf_matrix[1][1] 0.018688 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014641 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009194 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_