data_1ARC # _entry.id 1ARC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1ARC WWPDB D_1000171162 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ARC _pdbx_database_status.recvd_initial_deposition_date 1993-04-15 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kitagawa, Y.' 1 'Katsube, Y.' 2 # _citation.id primary _citation.title 'The primary structure and structural characteristics of Achromobacter lyticus protease I, a lysine-specific serine protease.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 264 _citation.page_first 3832 _citation.page_last 3839 _citation.year 1989 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 2492988 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tsunasawa, S.' 1 primary 'Masaki, T.' 2 primary 'Hirose, M.' 3 primary 'Soejima, M.' 4 primary 'Sakiyama, F.' 5 # _cell.entry_id 1ARC _cell.length_a 37.300 _cell.length_b 42.800 _cell.length_c 48.000 _cell.angle_alpha 120.10 _cell.angle_beta 112.80 _cell.angle_gamma 68.50 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1ARC _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ACHROMOBACTER PROTEASE I' 27759.227 1 3.4.21.50 ? 'residues 206-473' ? 2 non-polymer syn 'N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide' 332.846 1 ? ? ? ? 3 water nat water 18.015 72 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GVSGSCNIDVVCPEGDGRRDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTC RAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNS TSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAA ASRLSDWLDPASTGAQFIDGLDSGGGTP ; _entity_poly.pdbx_seq_one_letter_code_can ;GVSGSCNIDVVCPEGDGRRDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTC RAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNS TSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAA ASRLSDWLDPASTGAQFIDGLDSGGGTP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 VAL n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 CYS n 1 7 ASN n 1 8 ILE n 1 9 ASP n 1 10 VAL n 1 11 VAL n 1 12 CYS n 1 13 PRO n 1 14 GLU n 1 15 GLY n 1 16 ASP n 1 17 GLY n 1 18 ARG n 1 19 ARG n 1 20 ASP n 1 21 ILE n 1 22 ILE n 1 23 ARG n 1 24 ALA n 1 25 VAL n 1 26 GLY n 1 27 ALA n 1 28 TYR n 1 29 SER n 1 30 LYS n 1 31 SER n 1 32 GLY n 1 33 THR n 1 34 LEU n 1 35 ALA n 1 36 CYS n 1 37 THR n 1 38 GLY n 1 39 SER n 1 40 LEU n 1 41 VAL n 1 42 ASN n 1 43 ASN n 1 44 THR n 1 45 ALA n 1 46 ASN n 1 47 ASP n 1 48 ARG n 1 49 LYS n 1 50 MET n 1 51 TYR n 1 52 PHE n 1 53 LEU n 1 54 THR n 1 55 ALA n 1 56 HIS n 1 57 HIS n 1 58 CYS n 1 59 GLY n 1 60 MET n 1 61 GLY n 1 62 THR n 1 63 ALA n 1 64 SER n 1 65 THR n 1 66 ALA n 1 67 ALA n 1 68 SER n 1 69 ILE n 1 70 VAL n 1 71 VAL n 1 72 TYR n 1 73 TRP n 1 74 ASN n 1 75 TYR n 1 76 GLN n 1 77 ASN n 1 78 SER n 1 79 THR n 1 80 CYS n 1 81 ARG n 1 82 ALA n 1 83 PRO n 1 84 ASN n 1 85 THR n 1 86 PRO n 1 87 ALA n 1 88 SER n 1 89 GLY n 1 90 ALA n 1 91 ASN n 1 92 GLY n 1 93 ASP n 1 94 GLY n 1 95 SER n 1 96 MET n 1 97 SER n 1 98 GLN n 1 99 THR n 1 100 GLN n 1 101 SER n 1 102 GLY n 1 103 SER n 1 104 THR n 1 105 VAL n 1 106 LYS n 1 107 ALA n 1 108 THR n 1 109 TYR n 1 110 ALA n 1 111 THR n 1 112 SER n 1 113 ASP n 1 114 PHE n 1 115 THR n 1 116 LEU n 1 117 LEU n 1 118 GLU n 1 119 LEU n 1 120 ASN n 1 121 ASN n 1 122 ALA n 1 123 ALA n 1 124 ASN n 1 125 PRO n 1 126 ALA n 1 127 PHE n 1 128 ASN n 1 129 LEU n 1 130 PHE n 1 131 TRP n 1 132 ALA n 1 133 GLY n 1 134 TRP n 1 135 ASP n 1 136 ARG n 1 137 ARG n 1 138 ASP n 1 139 GLN n 1 140 ASN n 1 141 TYR n 1 142 PRO n 1 143 GLY n 1 144 ALA n 1 145 ILE n 1 146 ALA n 1 147 ILE n 1 148 HIS n 1 149 HIS n 1 150 PRO n 1 151 ASN n 1 152 VAL n 1 153 ALA n 1 154 GLU n 1 155 LYS n 1 156 ARG n 1 157 ILE n 1 158 SER n 1 159 ASN n 1 160 SER n 1 161 THR n 1 162 SER n 1 163 PRO n 1 164 THR n 1 165 SER n 1 166 PHE n 1 167 VAL n 1 168 ALA n 1 169 TRP n 1 170 GLY n 1 171 GLY n 1 172 GLY n 1 173 ALA n 1 174 GLY n 1 175 THR n 1 176 THR n 1 177 HIS n 1 178 LEU n 1 179 ASN n 1 180 VAL n 1 181 GLN n 1 182 TRP n 1 183 GLN n 1 184 PRO n 1 185 SER n 1 186 GLY n 1 187 GLY n 1 188 VAL n 1 189 THR n 1 190 GLU n 1 191 PRO n 1 192 GLY n 1 193 SER n 1 194 SER n 1 195 GLY n 1 196 SER n 1 197 PRO n 1 198 ILE n 1 199 TYR n 1 200 SER n 1 201 PRO n 1 202 GLU n 1 203 LYS n 1 204 ARG n 1 205 VAL n 1 206 LEU n 1 207 GLY n 1 208 GLN n 1 209 LEU n 1 210 HIS n 1 211 GLY n 1 212 GLY n 1 213 PRO n 1 214 SER n 1 215 SER n 1 216 CYS n 1 217 SER n 1 218 ALA n 1 219 THR n 1 220 GLY n 1 221 THR n 1 222 ASN n 1 223 ARG n 1 224 SER n 1 225 ASP n 1 226 GLN n 1 227 TYR n 1 228 GLY n 1 229 ARG n 1 230 VAL n 1 231 PHE n 1 232 THR n 1 233 SER n 1 234 TRP n 1 235 THR n 1 236 GLY n 1 237 GLY n 1 238 GLY n 1 239 ALA n 1 240 ALA n 1 241 ALA n 1 242 SER n 1 243 ARG n 1 244 LEU n 1 245 SER n 1 246 ASP n 1 247 TRP n 1 248 LEU n 1 249 ASP n 1 250 PRO n 1 251 ALA n 1 252 SER n 1 253 THR n 1 254 GLY n 1 255 ALA n 1 256 GLN n 1 257 PHE n 1 258 ILE n 1 259 ASP n 1 260 GLY n 1 261 LEU n 1 262 ASP n 1 263 SER n 1 264 GLY n 1 265 GLY n 1 266 GLY n 1 267 THR n 1 268 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Achromobacter _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Achromobacter lyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code API_ACHLY _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P15636 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MKRICGSLLLLGLSISAALAAPASRPAAFDYANLSSVDKVALRTMPAVDVAKAKAEDLQRDKRGDIPRFALAIDVDMTPQ NSGAWEYTADGQFAVWRQRVRSEKALSLNFGFTDYYMPAGGRLLVYPATQAPAGDRGLISQYDASNNNSARQLWTAVVPG AEAVIEAVIPRDKVGEFKLRLTKVNHDYVGFGPLARRLAAASGEKGVSGSCNIDVVCPEGDGRRDIIRAVGAYSKSGTLA CTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATYATSDFT LLELNNAANPAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPGSSG SPIYSPEKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAASRLSDWLDPASTGAQFIDGLDSGGGTPNTPPVAN FTSTTSGLTATFTDSSTDSDGSIASRSWNFGDGSTSTATNPSKTYAAAGTYTVTLTVTDNGGATNTKTGSVTVSGGPGAQ TYTNDTDVAIPDNATVESPITVSGRTGNGSATTPIQVTIYHTYKSDLKVDLVAPDGTVYNLHNRTGGSAHNIIQTFTKDL SSEAAQRAPGSCG ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1ARC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 268 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P15636 _struct_ref_seq.db_align_beg 206 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 473 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 268 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TCK peptide-like . 'N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide' Tos-Lys-CH2Cl 'C14 H21 Cl N2 O3 S' 332.846 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ARC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1ARC _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.152 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1924 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 2016 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? p_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1ARC _struct.title 'THE PRIMARY STRUCTURE AND STRUCTURAL CHARACTERISTICS OF ACHROMOBACTER LYTICUS PROTEASE I, A LYSINE-SPECIFIC SERINE PROTEASE' _struct.pdbx_descriptor 'ACHROMOBACTER PROTEASE I (E.C.3.4.21.50) COMPLEX WITH N(ALPHA)-P-TOSYL-L-LYSINE CHLOROMETHYLKETONE HYDROCHLORIDE (TLCK)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ARC _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'SERINE PROTEASE, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 12 ? ASP A 16 ? CYS A 12 ASP A 16 5 ? 5 HELX_P HELX_P2 2 ASP A 20 ? ARG A 23 ? ASP A 20 ARG A 23 5 ? 4 HELX_P HELX_P3 3 HIS A 57 ? GLY A 59 ? HIS A 57 GLY A 59 5 ? 3 HELX_P HELX_P4 4 THR A 62 ? SER A 68 ? THR A 62 SER A 68 1 ? 7 HELX_P HELX_P5 5 THR A 85 ? ALA A 90 ? THR A 85 ALA A 90 1 ? 6 HELX_P HELX_P6 6 ASN A 124 ? ASN A 128 ? ASN A 124 ASN A 128 5 ? 5 HELX_P HELX_P7 7 HIS A 149 ? ALA A 153 ? HIS A 149 ALA A 153 5 ? 5 HELX_P HELX_P8 8 THR A 219 ? ASN A 222 ? THR A 219 ASN A 222 5 ? 4 HELX_P HELX_P9 9 VAL A 230 ? GLY A 236 ? VAL A 230 GLY A 236 1 ? 7 HELX_P HELX_P10 10 ALA A 239 ? ARG A 243 ? ALA A 239 ARG A 243 5 ? 5 HELX_P HELX_P11 11 LEU A 244 ? ASP A 249 ? LEU A 244 ASP A 249 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 216 SG ? ? A CYS 6 A CYS 216 1_555 ? ? ? ? ? ? ? 1.989 ? disulf2 disulf ? ? A CYS 12 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 12 A CYS 80 1_555 ? ? ? ? ? ? ? 2.043 ? disulf3 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 58 SG ? ? A CYS 36 A CYS 58 1_555 ? ? ? ? ? ? ? 2.047 ? covale1 covale ? ? A HIS 57 NE2 ? ? ? 1_555 B TCK . CM ? ? A HIS 57 A TCK 270 1_555 ? ? ? ? ? ? ? 1.345 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 8 ? C ? 7 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 165 ? VAL A 167 ? SER A 165 VAL A 167 A 2 HIS A 177 ? GLN A 181 ? HIS A 177 GLN A 181 A 3 SER A 224 ? ARG A 229 ? SER A 224 ARG A 229 A 4 ARG A 204 ? GLY A 211 ? ARG A 204 GLY A 211 A 5 GLY A 133 ? ASP A 135 ? GLY A 133 ASP A 135 A 6 PHE A 257 ? ILE A 258 ? PHE A 257 ILE A 258 B 1 SER A 165 ? VAL A 167 ? SER A 165 VAL A 167 B 2 HIS A 177 ? GLN A 181 ? HIS A 177 GLN A 181 B 3 SER A 224 ? ARG A 229 ? SER A 224 ARG A 229 B 4 ARG A 204 ? GLY A 211 ? ARG A 204 GLY A 211 B 5 PRO A 197 ? TYR A 199 ? PRO A 197 TYR A 199 B 6 ALA A 144 ? HIS A 148 ? ALA A 144 HIS A 148 B 7 ARG A 156 ? SER A 160 ? ARG A 156 SER A 160 B 8 ILE A 8 ? ASP A 9 ? ILE A 8 ASP A 9 C 1 GLN A 98 ? SER A 101 ? GLN A 98 SER A 101 C 2 VAL A 70 ? TRP A 73 ? VAL A 70 TRP A 73 C 3 VAL A 25 ? LYS A 30 ? VAL A 25 LYS A 30 C 4 THR A 33 ? LEU A 40 ? THR A 33 LEU A 40 C 5 TYR A 51 ? ALA A 55 ? TYR A 51 ALA A 55 C 6 PHE A 114 ? LEU A 119 ? PHE A 114 LEU A 119 C 7 SER A 103 ? TYR A 109 ? SER A 103 TYR A 109 D 1 PHE A 130 ? TRP A 131 ? PHE A 130 TRP A 131 D 2 LEU A 261 ? ASP A 262 ? LEU A 261 ASP A 262 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 167 ? O VAL A 167 N HIS A 177 ? N HIS A 177 A 2 3 N VAL A 180 ? N VAL A 180 O ASP A 225 ? O ASP A 225 A 3 4 N GLY A 228 ? N GLY A 228 O GLN A 208 ? O GLN A 208 A 4 5 N VAL A 205 ? N VAL A 205 O GLY A 133 ? O GLY A 133 A 5 6 O TRP A 134 ? O TRP A 134 N ILE A 258 ? N ILE A 258 B 1 2 O VAL A 167 ? O VAL A 167 N HIS A 177 ? N HIS A 177 B 2 3 N VAL A 180 ? N VAL A 180 O ASP A 225 ? O ASP A 225 B 3 4 N GLY A 228 ? N GLY A 228 O GLN A 208 ? O GLN A 208 B 4 5 N LEU A 206 ? N LEU A 206 O ILE A 198 ? O ILE A 198 B 5 6 N TYR A 199 ? N TYR A 199 O ILE A 145 ? O ILE A 145 B 6 7 O HIS A 148 ? O HIS A 148 N ARG A 156 ? N ARG A 156 B 7 8 N ILE A 157 ? N ILE A 157 O ILE A 8 ? O ILE A 8 C 1 2 O GLN A 100 ? O GLN A 100 N VAL A 71 ? N VAL A 71 C 2 3 N TYR A 72 ? N TYR A 72 O ALA A 27 ? O ALA A 27 C 3 4 N LYS A 30 ? N LYS A 30 O THR A 33 ? O THR A 33 C 4 5 O SER A 39 ? O SER A 39 N LEU A 53 ? N LEU A 53 C 5 6 N THR A 54 ? N THR A 54 O THR A 115 ? O THR A 115 C 6 7 N GLU A 118 ? N GLU A 118 O THR A 104 ? O THR A 104 D 1 2 N TRP A 131 ? N TRP A 131 O LEU A 261 ? O LEU A 261 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE TCK A 270' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ALA A 45 ? ALA A 45 . ? 1_655 ? 2 AC1 13 ASN A 46 ? ASN A 46 . ? 1_655 ? 3 AC1 13 HIS A 57 ? HIS A 57 . ? 1_555 ? 4 AC1 13 TRP A 169 ? TRP A 169 . ? 1_555 ? 5 AC1 13 THR A 189 ? THR A 189 . ? 1_555 ? 6 AC1 13 PRO A 191 ? PRO A 191 . ? 1_555 ? 7 AC1 13 GLY A 192 ? GLY A 192 . ? 1_555 ? 8 AC1 13 SER A 194 ? SER A 194 . ? 1_555 ? 9 AC1 13 HIS A 210 ? HIS A 210 . ? 1_555 ? 10 AC1 13 GLY A 211 ? GLY A 211 . ? 1_555 ? 11 AC1 13 GLY A 212 ? GLY A 212 . ? 1_555 ? 12 AC1 13 SER A 214 ? SER A 214 . ? 1_555 ? 13 AC1 13 ASP A 225 ? ASP A 225 . ? 1_555 ? # _database_PDB_matrix.entry_id 1ARC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ARC _atom_sites.fract_transf_matrix[1][1] 0.026810 _atom_sites.fract_transf_matrix[1][2] -0.010561 _atom_sites.fract_transf_matrix[1][3] 0.007538 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025112 _atom_sites.fract_transf_matrix[2][3] 0.011592 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024891 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 TRP 131 131 131 TRP TRP A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 TRP 134 134 134 TRP TRP A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 PRO 150 150 150 PRO PRO A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 THR 161 161 161 THR THR A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 PRO 163 163 163 PRO PRO A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 SER 165 165 165 SER SER A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 TRP 169 169 169 TRP TRP A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 HIS 177 177 177 HIS HIS A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 PRO 197 197 197 PRO PRO A . n A 1 198 ILE 198 198 198 ILE ILE A . n A 1 199 TYR 199 199 199 TYR TYR A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 GLN 208 208 208 GLN GLN A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 HIS 210 210 210 HIS HIS A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 CYS 216 216 216 CYS CYS A . n A 1 217 SER 217 217 217 SER SER A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 ASN 222 222 222 ASN ASN A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 SER 224 224 224 SER SER A . n A 1 225 ASP 225 225 225 ASP ASP A . n A 1 226 GLN 226 226 226 GLN GLN A . n A 1 227 TYR 227 227 227 TYR TYR A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 ARG 229 229 229 ARG ARG A . n A 1 230 VAL 230 230 230 VAL VAL A . n A 1 231 PHE 231 231 231 PHE PHE A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 TRP 234 234 234 TRP TRP A . n A 1 235 THR 235 235 235 THR THR A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 GLY 238 238 238 GLY GLY A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 SER 242 242 242 SER SER A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 TRP 247 247 247 TRP TRP A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 ASP 249 249 249 ASP ASP A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 ALA 251 251 251 ALA ALA A . n A 1 252 SER 252 252 252 SER SER A . n A 1 253 THR 253 253 253 THR THR A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 GLN 256 256 256 GLN GLN A . n A 1 257 PHE 257 257 257 PHE PHE A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 ASP 262 262 262 ASP ASP A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 GLY 264 264 ? ? ? A . n A 1 265 GLY 265 265 ? ? ? A . n A 1 266 GLY 266 266 ? ? ? A . n A 1 267 THR 267 267 ? ? ? A . n A 1 268 PRO 268 268 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TCK 1 270 270 TCK TCK A . C 3 HOH 1 301 301 HOH HOH A . C 3 HOH 2 302 302 HOH HOH A . C 3 HOH 3 303 303 HOH HOH A . C 3 HOH 4 304 304 HOH HOH A . C 3 HOH 5 305 305 HOH HOH A . C 3 HOH 6 306 306 HOH HOH A . C 3 HOH 7 307 307 HOH HOH A . C 3 HOH 8 308 308 HOH HOH A . C 3 HOH 9 309 309 HOH HOH A . C 3 HOH 10 310 310 HOH HOH A . C 3 HOH 11 311 311 HOH HOH A . C 3 HOH 12 312 312 HOH HOH A . C 3 HOH 13 313 313 HOH HOH A . C 3 HOH 14 314 314 HOH HOH A . C 3 HOH 15 315 315 HOH HOH A . C 3 HOH 16 316 316 HOH HOH A . C 3 HOH 17 317 317 HOH HOH A . C 3 HOH 18 318 318 HOH HOH A . C 3 HOH 19 319 319 HOH HOH A . C 3 HOH 20 320 320 HOH HOH A . C 3 HOH 21 321 321 HOH HOH A . C 3 HOH 22 322 322 HOH HOH A . C 3 HOH 23 323 323 HOH HOH A . C 3 HOH 24 324 324 HOH HOH A . C 3 HOH 25 325 325 HOH HOH A . C 3 HOH 26 326 326 HOH HOH A . C 3 HOH 27 327 327 HOH HOH A . C 3 HOH 28 328 328 HOH HOH A . C 3 HOH 29 329 329 HOH HOH A . C 3 HOH 30 330 330 HOH HOH A . C 3 HOH 31 331 331 HOH HOH A . C 3 HOH 32 332 332 HOH HOH A . C 3 HOH 33 333 333 HOH HOH A . C 3 HOH 34 334 334 HOH HOH A . C 3 HOH 35 335 335 HOH HOH A . C 3 HOH 36 336 336 HOH HOH A . C 3 HOH 37 337 337 HOH HOH A . C 3 HOH 38 338 338 HOH HOH A . C 3 HOH 39 339 339 HOH HOH A . C 3 HOH 40 340 340 HOH HOH A . C 3 HOH 41 341 341 HOH HOH A . C 3 HOH 42 342 342 HOH HOH A . C 3 HOH 43 343 343 HOH HOH A . C 3 HOH 44 344 344 HOH HOH A . C 3 HOH 45 345 345 HOH HOH A . C 3 HOH 46 346 346 HOH HOH A . C 3 HOH 47 347 347 HOH HOH A . C 3 HOH 48 348 348 HOH HOH A . C 3 HOH 49 349 349 HOH HOH A . C 3 HOH 50 350 350 HOH HOH A . C 3 HOH 51 351 351 HOH HOH A . C 3 HOH 52 352 352 HOH HOH A . C 3 HOH 53 353 353 HOH HOH A . C 3 HOH 54 354 354 HOH HOH A . C 3 HOH 55 355 355 HOH HOH A . C 3 HOH 56 356 356 HOH HOH A . C 3 HOH 57 357 357 HOH HOH A . C 3 HOH 58 358 358 HOH HOH A . C 3 HOH 59 359 359 HOH HOH A . C 3 HOH 60 360 360 HOH HOH A . C 3 HOH 61 361 361 HOH HOH A . C 3 HOH 62 362 362 HOH HOH A . C 3 HOH 63 363 363 HOH HOH A . C 3 HOH 64 364 364 HOH HOH A . C 3 HOH 65 365 365 HOH HOH A . C 3 HOH 66 366 366 HOH HOH A . C 3 HOH 67 367 367 HOH HOH A . C 3 HOH 68 368 368 HOH HOH A . C 3 HOH 69 369 369 HOH HOH A . C 3 HOH 70 370 370 HOH HOH A . C 3 HOH 71 371 371 HOH HOH A . C 3 HOH 72 372 372 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_000459 _pdbx_molecule_features.name 'Tosyl-L-lysine chloromethyl ketone' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000459 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other # _software.name PROLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 194 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 TCK _pdbx_validate_close_contact.auth_seq_id_2 270 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.95 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 72 ? ? CG A TYR 72 ? ? CD1 A TYR 72 ? ? 117.35 121.00 -3.65 0.60 N 2 1 NE A ARG 243 ? ? CZ A ARG 243 ? ? NH2 A ARG 243 ? ? 116.64 120.30 -3.66 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 31 ? ? 39.48 45.33 2 1 ALA A 35 ? ? -128.36 -58.91 3 1 ASN A 151 ? ? 58.14 19.67 4 1 ALA A 153 ? ? -103.08 -166.20 5 1 VAL A 188 ? ? -129.43 -147.06 6 1 LYS A 203 ? ? 70.36 32.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 264 ? A GLY 264 2 1 Y 1 A GLY 265 ? A GLY 265 3 1 Y 1 A GLY 266 ? A GLY 266 4 1 Y 1 A THR 267 ? A THR 267 5 1 Y 1 A PRO 268 ? A PRO 268 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide' TCK 3 water HOH #