HEADER LIPID TRANSPORT 23-SEP-97 1AV1 TITLE CRYSTAL STRUCTURE OF HUMAN APOLIPOPROTEIN A-I COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN A-I; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: LIPID-BINDING DOMAIN; COMPND 5 SYNONYM: APO A-I; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: BL21; SOURCE 6 TISSUE: BLOOD; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PGEMEX; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: BL21 KEYWDS LIPOPROTEIN, LIPID TRANSPORT, CHOLESTEROL METABOLISM, KEYWDS 2 ATHEROSCLEROSIS, HDL, LCAT-ACTIVATION EXPDTA X-RAY DIFFRACTION AUTHOR D.W.BORHANI,D.P.ROGERS,J.A.ENGLER,C.G.BROUILLETTE REVDAT 4 07-FEB-24 1AV1 1 REMARK REVDAT 3 04-APR-18 1AV1 1 REMARK REVDAT 2 24-FEB-09 1AV1 1 VERSN REVDAT 1 04-FEB-98 1AV1 0 JRNL AUTH D.W.BORHANI,D.P.ROGERS,J.A.ENGLER,C.G.BROUILLETTE JRNL TITL CRYSTAL STRUCTURE OF TRUNCATED HUMAN APOLIPOPROTEIN A-I JRNL TITL 2 SUGGESTS A LIPID-BOUND CONFORMATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 94 12291 1997 JRNL REFN ISSN 0027-8424 JRNL PMID 9356442 JRNL DOI 10.1073/PNAS.94.23.12291 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.M.ROBERTS,M.J.RAY,T.W.SHIH,E.HAYDEN,M.M.READER, REMARK 1 AUTH 2 C.G.BROUILLETTE REMARK 1 TITL STRUCTURAL ANALYSIS OF APOLIPOPROTEIN A-I: LIMITED REMARK 1 TITL 2 PROTEOLYSIS OF METHIONINE-REDUCED AND-OXIDIZED LIPID-FREE REMARK 1 TITL 3 AND LIPID-BOUND HUMAN APO A-I REMARK 1 REF BIOCHEMISTRY V. 36 7615 1997 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.P.ROGERS,C.G.BROUILLETTE,J.A.ENGLER,S.W.TENDIAN,L.ROBERTS, REMARK 1 AUTH 2 V.K.MISHRA,G.M.ANANTHARAMAIAH,S.LUND-KATZ,M.C.PHILLIPS, REMARK 1 AUTH 3 M.J.RAY REMARK 1 TITL TRUNCATION OF THE AMINO TERMINUS OF HUMAN APOLIPOPROTEIN A-I REMARK 1 TITL 2 SUBSTANTIALLY ALTERS ONLY THE LIPID-FREE CONFORMATION REMARK 1 REF BIOCHEMISTRY V. 36 288 1997 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH C.G.BROUILLETTE,G.M.ANANTHARAMAIAH REMARK 1 TITL STRUCTURAL MODELS OF HUMAN APOLIPOPROTEIN A-I REMARK 1 REF BIOCHIM.BIOPHYS.ACTA V.1256 103 1995 REMARK 1 REFN ISSN 0006-3002 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.843 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 81.8 REMARK 3 NUMBER OF REFLECTIONS : 15543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.382 REMARK 3 FREE R VALUE : 0.428 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 785 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.015 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 42.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 946 REMARK 3 BIN R VALUE (WORKING SET) : 0.4300 REMARK 3 BIN FREE R VALUE : 0.4620 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 52 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.064 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 119.98400 REMARK 3 B22 (A**2) : 138.35100 REMARK 3 B33 (A**2) : 128.01400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.660 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.430 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : 24 (GROUPED) THERMAL FACT REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : CONSTRAINTS REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPH19.PEP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DATA USED IN REFINEMENT WERE SHARPENED REMARK 3 BY APPLICATION OF AN ARTIFICIAL TEMPERATURE FACTOR (-70. A**2). REMARK 4 REMARK 4 1AV1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171292. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-96 REMARK 200 TEMPERATURE (KELVIN) : 283 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : MACSCIENCE REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : DUAL SLITS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (AGROVATA, ROTAVATA, REMARK 200 TRUNCATE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16089 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : 0.16600 REMARK 200 FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 50.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73200 REMARK 200 R SYM FOR SHELL (I) : 0.73200 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: HASSP, X-PLOR 3.843 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE EXCLUDED ON A RESOLUTION-DEPENDENT BASIS FOR ALL REMARK 200 RESOLUTION SHELLS IN WHICH THE FOR FULLY-RECORDED REMARK 200 REFLECTIONS IN THAT SHELL WAS LESS THAN 2.5. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 1.2 M NA REMARK 280 CITRATE, 100 MM HEPES, PH 7.5 AT 4 DEGREES CELSIUS. CRYSTALS REMARK 280 WERE STABILIZED IN 1.4 M NA CITRATE, 100 MM HEPES, PH 7.5., REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.73500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.09500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.93500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 98.09500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.73500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.93500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -254.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 149 C ASP D 150 4555 0.52 REMARK 500 CB PRO B 143 NH1 ARG C 160 3645 0.99 REMARK 500 CZ ARG A 149 O ASP D 150 4555 1.01 REMARK 500 CA ARG B 151 NH1 ARG C 149 3645 1.09 REMARK 500 NH2 ARG A 149 O ASP D 150 4555 1.14 REMARK 500 OD1 ASP D 150 CD1 LEU D 222 4455 1.18 REMARK 500 NH2 ARG A 149 N ARG D 151 4555 1.27 REMARK 500 CD PRO B 143 NH2 ARG C 160 3645 1.31 REMARK 500 CB PRO B 143 CZ ARG C 160 3645 1.31 REMARK 500 CG PRO B 143 NH2 ARG C 160 3645 1.34 REMARK 500 CA ALA B 158 NE2 GLN C 138 3645 1.38 REMARK 500 CZ ARG A 149 C ASP D 150 4555 1.49 REMARK 500 O GLU B 147 NH2 ARG C 149 3645 1.50 REMARK 500 CG ARG B 151 CZ ARG C 149 3645 1.70 REMARK 500 NH1 ARG A 149 O ASP D 150 4555 1.72 REMARK 500 CG PRO B 143 CZ ARG C 160 3645 1.79 REMARK 500 CB ARG B 151 NH1 ARG C 149 3645 1.84 REMARK 500 N ARG B 151 NH2 ARG C 149 3645 1.84 REMARK 500 CG PRO B 143 NH1 ARG C 160 3645 1.85 REMARK 500 NE2 GLN A 138 O ALA D 158 4555 1.85 REMARK 500 CZ ARG A 149 N ARG D 151 4555 1.89 REMARK 500 NH2 ARG A 149 CA ASP D 150 4555 1.89 REMARK 500 C ALA B 158 NE2 GLN C 138 3645 1.91 REMARK 500 CB PRO B 143 NH2 ARG C 160 3645 1.92 REMARK 500 CA ARG B 151 CZ ARG C 149 3645 1.92 REMARK 500 CZ ARG A 149 CA ARG D 151 4555 1.97 REMARK 500 NH1 ARG A 149 C ARG D 151 4555 1.97 REMARK 500 NE ARG A 149 O ASP D 150 4555 2.04 REMARK 500 NH1 ARG A 149 O ARG D 151 4555 2.06 REMARK 500 CB ARG B 151 CZ ARG C 149 3645 2.07 REMARK 500 CG ASP D 150 CD1 LEU D 222 4455 2.09 REMARK 500 N ARG B 151 NH1 ARG C 149 3645 2.11 REMARK 500 CG ARG B 151 NE ARG C 149 3645 2.13 REMARK 500 OG1 THR B 161 OE2 GLU B 234 3645 2.13 REMARK 500 NE2 HIS B 162 ND1 HIS C 135 3645 2.13 REMARK 500 O ALA B 158 NE2 GLN C 138 3645 2.14 REMARK 500 CD2 HIS B 162 ND1 HIS C 135 3645 2.18 REMARK 500 CG ARG B 151 NH1 ARG C 149 3645 2.18 REMARK 500 CG ARG B 151 NH2 ARG C 149 3645 2.18 REMARK 500 NH2 ARG A 149 CA ARG D 151 4555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 220 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO D 220 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 47 7.18 -60.37 REMARK 500 ASN A 49 -15.45 -48.61 REMARK 500 THR A 56 -68.41 -94.18 REMARK 500 PRO A 66 -3.56 -58.47 REMARK 500 GLN A 69 -74.55 -63.08 REMARK 500 PHE A 71 -81.87 -84.09 REMARK 500 LEU A 75 -73.60 -65.77 REMARK 500 THR A 79 -78.43 -50.59 REMARK 500 GLN A 127 -76.27 -67.88 REMARK 500 GLU A 147 -82.78 -71.73 REMARK 500 ARG A 149 -70.55 -49.33 REMARK 500 ARG A 153 -71.33 -6.12 REMARK 500 ALA A 154 -71.47 -49.64 REMARK 500 LEU A 163 -61.69 -106.00 REMARK 500 ALA A 164 -48.93 -19.13 REMARK 500 ARG A 173 -72.59 -83.69 REMARK 500 ASP A 213 -72.69 -49.62 REMARK 500 PRO A 220 44.91 -84.90 REMARK 500 LEU A 222 150.11 -45.45 REMARK 500 GLU A 223 -167.51 -126.80 REMARK 500 PHE A 225 87.14 39.42 REMARK 500 VAL A 227 -38.56 -32.25 REMARK 500 SER A 228 -90.69 104.87 REMARK 500 TYR A 236 -75.65 -38.80 REMARK 500 ASP B 48 11.66 -67.85 REMARK 500 SER B 55 5.84 -69.92 REMARK 500 PHE B 57 -73.76 -67.70 REMARK 500 PRO B 66 -9.50 -55.56 REMARK 500 PHE B 71 -79.80 -71.04 REMARK 500 THR B 79 -71.78 -33.09 REMARK 500 SER B 87 -34.44 -38.23 REMARK 500 GLU B 120 -46.06 -26.62 REMARK 500 VAL B 156 -70.92 -57.73 REMARK 500 ALA B 164 -49.68 -29.02 REMARK 500 LEU B 219 151.66 -41.84 REMARK 500 GLU B 223 107.88 -43.00 REMARK 500 LYS B 226 -120.00 -106.99 REMARK 500 TYR B 236 -72.85 -60.34 REMARK 500 THR B 242 -76.25 -88.13 REMARK 500 LEU C 47 7.12 -60.34 REMARK 500 ASN C 49 -15.45 -48.66 REMARK 500 THR C 56 -68.40 -94.17 REMARK 500 PRO C 66 -3.59 -58.44 REMARK 500 GLN C 69 -74.51 -63.06 REMARK 500 PHE C 71 -81.85 -84.08 REMARK 500 LEU C 75 -73.59 -65.76 REMARK 500 THR C 79 -78.34 -50.68 REMARK 500 GLN C 127 -76.31 -67.86 REMARK 500 GLU C 147 -82.78 -71.75 REMARK 500 ARG C 149 -70.56 -49.34 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 100 0.12 SIDE CHAIN REMARK 500 TYR C 100 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1AV1 A 44 243 UNP P02647 APOA1_HUMAN 68 267 DBREF 1AV1 B 44 243 UNP P02647 APOA1_HUMAN 68 267 DBREF 1AV1 C 44 243 UNP P02647 APOA1_HUMAN 68 267 DBREF 1AV1 D 44 243 UNP P02647 APOA1_HUMAN 68 267 SEQRES 1 A 201 MET LEU LYS LEU LEU ASP ASN TRP ASP SER VAL THR SER SEQRES 2 A 201 THR PHE SER LYS LEU ARG GLU GLN LEU GLY PRO VAL THR SEQRES 3 A 201 GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU THR GLU GLY SEQRES 4 A 201 LEU ARG GLN GLU MET SER LYS ASP LEU GLU GLU VAL LYS SEQRES 5 A 201 ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE GLN LYS LYS SEQRES 6 A 201 TRP GLN GLU GLU MET GLU LEU TYR ARG GLN LYS VAL GLU SEQRES 7 A 201 PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA ARG GLN LYS SEQRES 8 A 201 LEU HIS GLU LEU GLN GLU LYS LEU SER PRO LEU GLY GLU SEQRES 9 A 201 GLU MET ARG ASP ARG ALA ARG ALA HIS VAL ASP ALA LEU SEQRES 10 A 201 ARG THR HIS LEU ALA PRO TYR SER ASP GLU LEU ARG GLN SEQRES 11 A 201 ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS GLU ASN GLY SEQRES 12 A 201 GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS ALA THR GLU SEQRES 13 A 201 HIS LEU SER THR LEU SER GLU LYS ALA LYS PRO ALA LEU SEQRES 14 A 201 GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL LEU GLU SER SEQRES 15 A 201 PHE LYS VAL SER PHE LEU SER ALA LEU GLU GLU TYR THR SEQRES 16 A 201 LYS LYS LEU ASN THR GLN SEQRES 1 B 201 MET LEU LYS LEU LEU ASP ASN TRP ASP SER VAL THR SER SEQRES 2 B 201 THR PHE SER LYS LEU ARG GLU GLN LEU GLY PRO VAL THR SEQRES 3 B 201 GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU THR GLU GLY SEQRES 4 B 201 LEU ARG GLN GLU MET SER LYS ASP LEU GLU GLU VAL LYS SEQRES 5 B 201 ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE GLN LYS LYS SEQRES 6 B 201 TRP GLN GLU GLU MET GLU LEU TYR ARG GLN LYS VAL GLU SEQRES 7 B 201 PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA ARG GLN LYS SEQRES 8 B 201 LEU HIS GLU LEU GLN GLU LYS LEU SER PRO LEU GLY GLU SEQRES 9 B 201 GLU MET ARG ASP ARG ALA ARG ALA HIS VAL ASP ALA LEU SEQRES 10 B 201 ARG THR HIS LEU ALA PRO TYR SER ASP GLU LEU ARG GLN SEQRES 11 B 201 ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS GLU ASN GLY SEQRES 12 B 201 GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS ALA THR GLU SEQRES 13 B 201 HIS LEU SER THR LEU SER GLU LYS ALA LYS PRO ALA LEU SEQRES 14 B 201 GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL LEU GLU SER SEQRES 15 B 201 PHE LYS VAL SER PHE LEU SER ALA LEU GLU GLU TYR THR SEQRES 16 B 201 LYS LYS LEU ASN THR GLN SEQRES 1 C 201 MET LEU LYS LEU LEU ASP ASN TRP ASP SER VAL THR SER SEQRES 2 C 201 THR PHE SER LYS LEU ARG GLU GLN LEU GLY PRO VAL THR SEQRES 3 C 201 GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU THR GLU GLY SEQRES 4 C 201 LEU ARG GLN GLU MET SER LYS ASP LEU GLU GLU VAL LYS SEQRES 5 C 201 ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE GLN LYS LYS SEQRES 6 C 201 TRP GLN GLU GLU MET GLU LEU TYR ARG GLN LYS VAL GLU SEQRES 7 C 201 PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA ARG GLN LYS SEQRES 8 C 201 LEU HIS GLU LEU GLN GLU LYS LEU SER PRO LEU GLY GLU SEQRES 9 C 201 GLU MET ARG ASP ARG ALA ARG ALA HIS VAL ASP ALA LEU SEQRES 10 C 201 ARG THR HIS LEU ALA PRO TYR SER ASP GLU LEU ARG GLN SEQRES 11 C 201 ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS GLU ASN GLY SEQRES 12 C 201 GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS ALA THR GLU SEQRES 13 C 201 HIS LEU SER THR LEU SER GLU LYS ALA LYS PRO ALA LEU SEQRES 14 C 201 GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL LEU GLU SER SEQRES 15 C 201 PHE LYS VAL SER PHE LEU SER ALA LEU GLU GLU TYR THR SEQRES 16 C 201 LYS LYS LEU ASN THR GLN SEQRES 1 D 201 MET LEU LYS LEU LEU ASP ASN TRP ASP SER VAL THR SER SEQRES 2 D 201 THR PHE SER LYS LEU ARG GLU GLN LEU GLY PRO VAL THR SEQRES 3 D 201 GLN GLU PHE TRP ASP ASN LEU GLU LYS GLU THR GLU GLY SEQRES 4 D 201 LEU ARG GLN GLU MET SER LYS ASP LEU GLU GLU VAL LYS SEQRES 5 D 201 ALA LYS VAL GLN PRO TYR LEU ASP ASP PHE GLN LYS LYS SEQRES 6 D 201 TRP GLN GLU GLU MET GLU LEU TYR ARG GLN LYS VAL GLU SEQRES 7 D 201 PRO LEU ARG ALA GLU LEU GLN GLU GLY ALA ARG GLN LYS SEQRES 8 D 201 LEU HIS GLU LEU GLN GLU LYS LEU SER PRO LEU GLY GLU SEQRES 9 D 201 GLU MET ARG ASP ARG ALA ARG ALA HIS VAL ASP ALA LEU SEQRES 10 D 201 ARG THR HIS LEU ALA PRO TYR SER ASP GLU LEU ARG GLN SEQRES 11 D 201 ARG LEU ALA ALA ARG LEU GLU ALA LEU LYS GLU ASN GLY SEQRES 12 D 201 GLY ALA ARG LEU ALA GLU TYR HIS ALA LYS ALA THR GLU SEQRES 13 D 201 HIS LEU SER THR LEU SER GLU LYS ALA LYS PRO ALA LEU SEQRES 14 D 201 GLU ASP LEU ARG GLN GLY LEU LEU PRO VAL LEU GLU SER SEQRES 15 D 201 PHE LYS VAL SER PHE LEU SER ALA LEU GLU GLU TYR THR SEQRES 16 D 201 LYS LYS LEU ASN THR GLN HELIX 1 1 TRP A 50 GLY A 65 1 16 HELIX 2 2 PRO A 66 SER A 87 1 22 HELIX 3 3 LYS A 88 GLN A 98 1 11 HELIX 4 4 PRO A 99 GLU A 120 1 22 HELIX 5 5 PRO A 121 SER A 142 1 22 HELIX 6 6 PRO A 143 ALA A 164 1 22 HELIX 7 7 PRO A 165 GLY A 186 1 22 HELIX 8 8 ALA A 187 LYS A 208 1 22 HELIX 9 9 PRO A 209 LEU A 219 1 11 HELIX 10 10 SER A 228 GLN A 243 1 16 HELIX 11 11 TRP B 50 GLY B 65 1 16 HELIX 12 12 PRO B 66 SER B 87 1 22 HELIX 13 13 LYS B 88 GLN B 98 1 11 HELIX 14 14 PRO B 99 GLU B 120 1 22 HELIX 15 15 PRO B 121 SER B 142 1 22 HELIX 16 16 PRO B 143 ALA B 164 1 22 HELIX 17 17 PRO B 165 GLY B 186 1 22 HELIX 18 18 ALA B 187 LYS B 208 1 22 HELIX 19 19 PRO B 209 LEU B 219 1 11 HELIX 20 20 SER B 228 GLN B 243 1 16 HELIX 21 21 TRP C 50 GLY C 65 1 16 HELIX 22 22 PRO C 66 SER C 87 1 22 HELIX 23 23 LYS C 88 GLN C 98 1 11 HELIX 24 24 PRO C 99 GLU C 120 1 22 HELIX 25 25 PRO C 121 SER C 142 1 22 HELIX 26 26 PRO C 143 ALA C 164 1 22 HELIX 27 27 PRO C 165 GLY C 186 1 22 HELIX 28 28 ALA C 187 LYS C 208 1 22 HELIX 29 29 PRO C 209 LEU C 219 1 11 HELIX 30 30 SER C 228 GLN C 243 1 16 HELIX 31 31 TRP D 50 GLY D 65 1 16 HELIX 32 32 PRO D 66 SER D 87 1 22 HELIX 33 33 LYS D 88 GLN D 98 1 11 HELIX 34 34 PRO D 99 GLU D 120 1 22 HELIX 35 35 PRO D 121 SER D 142 1 22 HELIX 36 36 PRO D 143 ALA D 164 1 22 HELIX 37 37 PRO D 165 GLY D 186 1 22 HELIX 38 38 ALA D 187 LYS D 208 1 22 HELIX 39 39 PRO D 209 LEU D 219 1 11 HELIX 40 40 SER D 228 GLN D 243 1 16 CRYST1 97.470 113.870 196.190 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010260 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008782 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005097 0.00000 MTRIX1 1 -0.231719 -0.855967 -0.462202 76.14400 1 MTRIX2 1 -0.856755 -0.045469 0.513715 41.28500 1 MTRIX3 1 -0.460739 0.515028 -0.722818 50.60500 1 MTRIX1 2 0.057013 0.997283 -0.046640 17.83200 1 MTRIX2 2 0.997171 -0.059174 -0.046348 -16.34300 1 MTRIX3 2 -0.048982 -0.043865 -0.997836 53.15900 1 MTRIX1 3 -0.846149 -0.118168 0.519680 60.98600 1 MTRIX2 3 -0.159004 -0.874725 -0.457792 54.79700 1 MTRIX3 3 0.508674 -0.469991 0.721359 -2.87700 1