data_1AV2 # _entry.id 1AV2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1AV2 pdb_00001av2 10.2210/pdb1av2/pdb WWPDB D_1000171293 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-07-01 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2012-12-12 6 'Structure model' 1 5 2013-02-06 7 'Structure model' 2 0 2023-11-15 8 'Structure model' 2 1 2024-04-03 9 'Structure model' 2 2 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Other 9 6 'Structure model' 'Derived calculations' 10 7 'Structure model' 'Atomic model' 11 7 'Structure model' 'Data collection' 12 7 'Structure model' 'Database references' 13 7 'Structure model' 'Derived calculations' 14 7 'Structure model' Other 15 8 'Structure model' 'Refinement description' 16 9 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 7 'Structure model' atom_site 2 7 'Structure model' atom_site_anisotrop 3 7 'Structure model' chem_comp_atom 4 7 'Structure model' chem_comp_bond 5 7 'Structure model' database_2 6 7 'Structure model' pdbx_database_status 7 7 'Structure model' pdbx_struct_conn_angle 8 7 'Structure model' struct_conn 9 7 'Structure model' struct_site 10 8 'Structure model' pdbx_initial_refinement_model 11 9 'Structure model' pdbx_entry_details 12 9 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 7 'Structure model' '_atom_site.auth_atom_id' 2 7 'Structure model' '_atom_site.label_atom_id' 3 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 4 7 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 5 7 'Structure model' '_database_2.pdbx_DOI' 6 7 'Structure model' '_database_2.pdbx_database_accession' 7 7 'Structure model' '_pdbx_database_status.process_site' 8 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 9 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 13 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 14 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 7 'Structure model' '_pdbx_struct_conn_angle.value' 23 7 'Structure model' '_struct_conn.conn_type_id' 24 7 'Structure model' '_struct_conn.id' 25 7 'Structure model' '_struct_conn.pdbx_dist_value' 26 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 27 7 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 28 7 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 29 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 30 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 31 7 'Structure model' '_struct_conn.ptnr1_label_asym_id' 32 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 33 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 34 7 'Structure model' '_struct_conn.ptnr1_label_seq_id' 35 7 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 36 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 37 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 38 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 40 7 'Structure model' '_struct_conn.ptnr2_label_comp_id' 41 7 'Structure model' '_struct_conn.ptnr2_label_seq_id' 42 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 7 'Structure model' '_struct_site.pdbx_auth_seq_id' 45 9 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AV2 _pdbx_database_status.recvd_initial_deposition_date 1997-09-23 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1TK2 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN S COMPLEXED WITH ALKALINE PROTEINASE SAVINASE' PDB 2XDC unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A FROM CRYSTALS GROWN IN A LIPID CUBIC PHASE. RELATED ENTRIES' PDB 1BDW unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A FROM BACILLUS BREVIS' PDB 1C4D unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE' PDB 1GMK unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLRXED WITH POTASSIUM THIOCYANATE' PDB 1GRM unspecified 'SOLUTION STRUCTURE OF THE GRAMICIDIN A' PDB 1JNO unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN SODIUM DODECYL SULFATE MICELLES' PDB 1KQE unspecified 'SOLUTION STRUCTURE OF A LINKED SHORTENED GRAMICIDIN A IN BENZENE/ACETONE 10:1' PDB 1MAG unspecified 'SOLID STATE NMR STRUCTURE OF GRAMICIDIN A IN HYDRATED DMPC BILAYERS,' PDB 1MIC unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN METHANOL IN THE PRESENCE OF CACL' PDB 1NG8 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A (W15G) IN SODIUM DODECYL SULFATE MICELLES' PDB 1NRM unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES' PDB 1NRU unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES IN THE PRESENCE OF EXCESS NA+' PDB 1NT5 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN A (V1F) IN SODIUM DODECYL SULFATE MICELLES' PDB 1JO3 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN B IN SODIUM DODECYL SULFATE MICELLES' PDB 1JO4 unspecified 'SOLUTION STRUCTURE OF GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES' PDB 1NT6 unspecified 'SOLUTION STRUCTURE OF F1-GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES' PDB 1TKQ unspecified 'SOLUTION STRUCTURE OF A LINKED UNSYMMETRIC GRAMICIDIN A IN A MEMBRANE-ISOELECTRICAL SOLVENTS MIXTURE, IN THE PRESENCE OF CSCL' PDB 1W5U unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN ETHANOL' PDB 2IZQ unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH KI IN METHANOL' PDB 3L8L unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH NAI' PDB 1AL4 unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN N-PROPANOL' PDB 1ALX unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN METHANOL' PDB 1ALZ unspecified 'CRYSTAL STRUCTURE OF GRAMICIDIN D IN ETHANOL' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Burkhart, B.M.' 1 'Li, N.' 2 'Langs, D.A.' 3 'Duax, W.L.' 4 # _citation.id primary _citation.title 'The Conducting Form of Gramicidin a is a Right-Handed Double-Stranded Double Helix.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 95 _citation.page_first 12950 _citation.page_last ? _citation.year 1998 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9789021 _citation.pdbx_database_id_DOI 10.1073/PNAS.95.22.12950 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Burkhart, B.M.' 1 ? primary 'Li, N.' 2 ? primary 'Langs, D.A.' 3 ? primary 'Pangborn, W.A.' 4 ? primary 'Duax, W.L.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'GRAMICIDIN A' 1882.294 4 ? ? ? ? 2 non-polymer syn 'CESIUM ION' 132.905 7 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 4 non-polymer syn METHANOL 32.042 9 ? ? ? ? 5 water nat water 18.015 22 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'VALYL GRAMICIDIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(FVA)GA(DLE)A(DVA)V(DVA)W(DLE)W(DLE)W(DLE)W(ETA)' _entity_poly.pdbx_seq_one_letter_code_can VGALAVVVWLWLWLWX _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CESIUM ION' CS 3 'CHLORIDE ION' CL 4 METHANOL MOH 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 FVA n 1 2 GLY n 1 3 ALA n 1 4 DLE n 1 5 ALA n 1 6 DVA n 1 7 VAL n 1 8 DVA n 1 9 TRP n 1 10 DLE n 1 11 TRP n 1 12 DLE n 1 13 TRP n 1 14 DLE n 1 15 TRP n 1 16 ETA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'BREVIBACILLUS BREVIS' _entity_src_nat.pdbx_ncbi_taxonomy_id 1393 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CS non-polymer . 'CESIUM ION' ? 'Cs 1' 132.905 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 ETA 'L-peptide COOH carboxy terminus' . ETHANOLAMINE ? 'C2 H7 N O' 61.083 FVA 'L-peptide linking' n N-formyl-L-valine ? 'C6 H11 N O3' 145.156 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 MOH non-polymer . METHANOL ? 'C H4 O' 32.042 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 FVA 1 1 1 FVA FVA A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 DLE 4 4 4 DLE DLE A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 DVA 6 6 6 DVA DVA A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 DVA 8 8 8 DVA DVA A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 DLE 10 10 10 DLE DLE A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 DLE 12 12 12 DLE DLE A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 DLE 14 14 14 DLE DLE A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 ETA 16 16 16 ETA ETA A . n B 1 1 FVA 1 1 1 FVA FVA B . n B 1 2 GLY 2 2 2 GLY GLY B . n B 1 3 ALA 3 3 3 ALA ALA B . n B 1 4 DLE 4 4 4 DLE DLE B . n B 1 5 ALA 5 5 5 ALA ALA B . n B 1 6 DVA 6 6 6 DVA DVA B . n B 1 7 VAL 7 7 7 VAL VAL B . n B 1 8 DVA 8 8 8 DVA DVA B . n B 1 9 TRP 9 9 9 TRP TRP B . n B 1 10 DLE 10 10 10 DLE DLE B . n B 1 11 TRP 11 11 11 TRP TRP B . n B 1 12 DLE 12 12 12 DLE DLE B . n B 1 13 TRP 13 13 13 TRP TRP B . n B 1 14 DLE 14 14 14 DLE DLE B . n B 1 15 TRP 15 15 15 TRP TRP B . n B 1 16 ETA 16 16 16 ETA ETA B . n C 1 1 FVA 1 1 1 FVA FVA C . n C 1 2 GLY 2 2 2 GLY GLY C . n C 1 3 ALA 3 3 3 ALA ALA C . n C 1 4 DLE 4 4 4 DLE DLE C . n C 1 5 ALA 5 5 5 ALA ALA C . n C 1 6 DVA 6 6 6 DVA DVA C . n C 1 7 VAL 7 7 7 VAL VAL C . n C 1 8 DVA 8 8 8 DVA DVA C . n C 1 9 TRP 9 9 9 TRP TRP C . n C 1 10 DLE 10 10 10 DLE DLE C . n C 1 11 TRP 11 11 11 TRP TRP C . n C 1 12 DLE 12 12 12 DLE DLE C . n C 1 13 TRP 13 13 13 TRP TRP C . n C 1 14 DLE 14 14 14 DLE DLE C . n C 1 15 TRP 15 15 15 TRP TRP C . n C 1 16 ETA 16 16 16 ETA ETA C . n D 1 1 FVA 1 1 1 FVA FVA D . n D 1 2 GLY 2 2 2 GLY GLY D . n D 1 3 ALA 3 3 3 ALA ALA D . n D 1 4 DLE 4 4 4 DLE DLE D . n D 1 5 ALA 5 5 5 ALA ALA D . n D 1 6 DVA 6 6 6 DVA DVA D . n D 1 7 VAL 7 7 7 VAL VAL D . n D 1 8 DVA 8 8 8 DVA DVA D . n D 1 9 TRP 9 9 9 TRP TRP D . n D 1 10 DLE 10 10 10 DLE DLE D . n D 1 11 TRP 11 11 11 TRP TRP D . n D 1 12 DLE 12 12 12 DLE DLE D . n D 1 13 TRP 13 13 13 TRP TRP D . n D 1 14 DLE 14 14 14 DLE DLE D . n D 1 15 TRP 15 15 15 TRP TRP D . n D 1 16 ETA 16 16 16 ETA ETA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CS 1 17 17 CS CS A . F 2 CS 1 18 18 CS CS A . G 3 CL 1 19 19 CL CL A . H 4 MOH 1 501 501 MOH MOH A . I 4 MOH 1 505 505 MOH MOH A . J 4 MOH 1 506 506 MOH MOH A . K 4 MOH 1 510 510 MOH MOH A . L 2 CS 1 17 17 CS CS B . M 2 CS 1 18 18 CS CS B . N 3 CL 1 19 19 CL CL B . O 4 MOH 1 502 502 MOH MOH B . P 4 MOH 1 503 503 MOH MOH B . Q 4 MOH 1 508 508 MOH MOH B . R 4 MOH 1 511 511 MOH MOH B . S 2 CS 1 17 17 CS CS C . T 2 CS 1 18 18 CS CS C . U 2 CS 1 19 19 CS CS C . V 3 CL 1 20 20 CL CL C . W 3 CL 1 17 17 CL CL D . X 4 MOH 1 509 509 MOH MOH D . Y 5 HOH 1 2001 2001 HOH HOH A . Z 5 HOH 1 2001 2001 HOH HOH B . Z 5 HOH 2 2002 2002 HOH HOH B . Z 5 HOH 3 2003 2003 HOH HOH B . Z 5 HOH 4 2004 2004 HOH HOH B . Z 5 HOH 5 2005 2005 HOH HOH B . Z 5 HOH 6 2006 2006 HOH HOH B . Z 5 HOH 7 2007 2007 HOH HOH B . Z 5 HOH 8 2008 2008 HOH HOH B . AA 5 HOH 1 2001 2001 HOH HOH C . AA 5 HOH 2 2002 2002 HOH HOH C . BA 5 HOH 1 2001 2001 HOH HOH D . BA 5 HOH 2 2002 2002 HOH HOH D . BA 5 HOH 3 2003 2003 HOH HOH D . BA 5 HOH 4 2004 2004 HOH HOH D . BA 5 HOH 5 2005 2005 HOH HOH D . BA 5 HOH 6 2006 2006 HOH HOH D . BA 5 HOH 7 2007 2007 HOH HOH D . BA 5 HOH 8 2008 2008 HOH HOH D . BA 5 HOH 9 2009 2009 HOH HOH D . BA 5 HOH 10 2010 2010 HOH HOH D . BA 5 HOH 11 2011 2011 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 'model building' . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 SHELXL-97 phasing . ? 5 # _cell.entry_id 1AV2 _cell.length_a 31.060 _cell.length_b 31.880 _cell.length_c 52.110 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1AV2 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1AV2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.74 _exptl_crystal.density_percent_sol 30.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '30 MG/ML GRAMICIDIN, SATURATED CSCL, METHANOL, PH 7.0, BATCH METHOD' # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1995-10-15 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1AV2 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 1.400 _reflns.number_obs 108451 _reflns.number_all ? _reflns.percent_possible_obs 92.4 _reflns.pdbx_Rmerge_I_obs 0.09600 _reflns.pdbx_Rsym_value 0.09600 _reflns.pdbx_netI_over_sigmaI 59.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.100 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 54.5 _reflns_shell.Rmerge_I_obs 0.15200 _reflns_shell.pdbx_Rsym_value 0.15200 _reflns_shell.meanI_over_sigI_obs 2.900 _reflns_shell.pdbx_redundancy 2.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1AV2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 17776 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 100.00 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 92.4 _refine.ls_R_factor_obs 0.154 _refine.ls_R_factor_all 0.156 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.186 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1788 _refine.ls_number_parameters 5261 _refine.ls_number_restraints 6720 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER (G = 0.83086, U = 1.41203)' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'METHANOL MOLECULES WERE KEPT ISOTROPIC WITH NO HYDROGENS BECAUSE OF HIGH DISORDER. THE BIJVOET DIFFERENCES WERE USED IN PHASING' _refine.pdbx_starting_model 'HOME-MADE MODEL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT/ ANOMALOUS SCATTERING' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1AV2 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 2 _refine_analyze.occupancy_sum_hydrogen 560.00 _refine_analyze.occupancy_sum_non_hydrogen 572.47 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 544 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 595 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 100.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.035 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.311 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.070 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.087 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.048 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1AV2 _pdbx_refine.R_factor_all_no_cutoff 0.156 _pdbx_refine.R_factor_obs_no_cutoff 0.154 _pdbx_refine.free_R_factor_no_cutoff 0.186 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.000 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 1788 _pdbx_refine.R_factor_all_4sig_cutoff 0.147 _pdbx_refine.R_factor_obs_4sig_cutoff 0.144 _pdbx_refine.free_R_factor_4sig_cutoff 0.174 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 7.200 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1274 _pdbx_refine.number_reflns_obs_4sig_cutoff 12952 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? -0.875190 0.483510 -0.015860 0.483740 0.874330 -0.039200 -0.005090 -0.041980 -0.999110 36.49000 -8.05000 67.49000 2 given ? -0.894160 0.447680 0.007630 0.447740 0.894120 0.009180 -0.002710 0.011620 -0.999930 43.94000 -10.75000 64.58000 3 given ? -0.999770 -0.020990 0.003810 0.021040 -0.999680 0.013960 0.003520 0.014040 0.999900 46.49000 14.96000 1.03000 # _database_PDB_matrix.entry_id 1AV2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1AV2 _struct.title 'Gramicidin A/CsCl complex, active as a dimer' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AV2 _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'GRAMICIDIN, ANTIFUNGAL, ANTIBACTERIAL, ANTIBIOTIC, MEMBRANE ION CHANNEL, LINEAR GRAMICIDIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 2 ? M N N 2 ? N N N 3 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 2 ? T N N 2 ? U N N 2 ? V N N 3 ? W N N 3 ? X N N 4 ? Y N N 5 ? Z N N 5 ? AA N N 5 ? BA N N 5 ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR00243 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR00243 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1AV2 A 1 ? 16 ? NOR00243 1 ? 16 ? 1 16 2 1 1AV2 B 1 ? 16 ? NOR00243 1 ? 16 ? 1 16 3 1 1AV2 C 1 ? 16 ? NOR00243 1 ? 16 ? 1 16 4 1 1AV2 D 1 ? 16 ? NOR00243 1 ? 16 ? 1 16 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9260 ? 1 MORE -372.0 ? 1 'SSA (A^2)' 5120 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,Y,Z 2 1 C,D,S,T,U,V,W,X,AA,BA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A FVA 1 C ? ? ? 1_555 A GLY 2 N ? ? A FVA 1 A GLY 2 1_555 ? ? ? ? ? ? ? 1.287 ? ? covale2 covale both ? A ALA 3 C ? ? ? 1_555 A DLE 4 N ? ? A ALA 3 A DLE 4 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale3 covale both ? A DLE 4 C ? ? ? 1_555 A ALA 5 N ? ? A DLE 4 A ALA 5 1_555 ? ? ? ? ? ? ? 1.299 ? ? covale4 covale both ? A ALA 5 C ? ? ? 1_555 A DVA 6 N ? ? A ALA 5 A DVA 6 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A DVA 6 C ? ? ? 1_555 A VAL 7 N ? ? A DVA 6 A VAL 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? A VAL 7 C ? ? ? 1_555 A DVA 8 N ? ? A VAL 7 A DVA 8 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale7 covale both ? A DVA 8 C ? ? ? 1_555 A TRP 9 N ? ? A DVA 8 A TRP 9 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? A TRP 9 C ? ? ? 1_555 A DLE 10 N ? ? A TRP 9 A DLE 10 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale9 covale both ? A DLE 10 C ? ? ? 1_555 A TRP 11 N ? ? A DLE 10 A TRP 11 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale10 covale both ? A TRP 11 C ? ? ? 1_555 A DLE 12 N ? ? A TRP 11 A DLE 12 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale11 covale both ? A DLE 12 C ? ? ? 1_555 A TRP 13 N ? ? A DLE 12 A TRP 13 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale12 covale both ? A TRP 13 C ? ? ? 1_555 A DLE 14 N ? ? A TRP 13 A DLE 14 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale13 covale both ? A DLE 14 C ? ? ? 1_555 A TRP 15 N ? ? A DLE 14 A TRP 15 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale14 covale both ? A TRP 15 C ? ? ? 1_555 A ETA 16 N ? ? A TRP 15 A ETA 16 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale both ? B FVA 1 C ? ? ? 1_555 B GLY 2 N ? ? B FVA 1 B GLY 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale16 covale both ? B ALA 3 C ? ? ? 1_555 B DLE 4 N ? ? B ALA 3 B DLE 4 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale17 covale both ? B DLE 4 C ? ? ? 1_555 B ALA 5 N ? ? B DLE 4 B ALA 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale18 covale both ? B ALA 5 C ? ? ? 1_555 B DVA 6 N ? ? B ALA 5 B DVA 6 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale19 covale both ? B DVA 6 C ? ? ? 1_555 B VAL 7 N ? ? B DVA 6 B VAL 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale20 covale both ? B VAL 7 C ? ? ? 1_555 B DVA 8 N ? ? B VAL 7 B DVA 8 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale21 covale both ? B DVA 8 C ? ? ? 1_555 B TRP 9 N ? ? B DVA 8 B TRP 9 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale22 covale both ? B TRP 9 C ? ? ? 1_555 B DLE 10 N ? ? B TRP 9 B DLE 10 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale23 covale both ? B DLE 10 C ? ? ? 1_555 B TRP 11 N ? ? B DLE 10 B TRP 11 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale24 covale both ? B TRP 11 C ? ? ? 1_555 B DLE 12 N ? ? B TRP 11 B DLE 12 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale25 covale both ? B DLE 12 C ? ? ? 1_555 B TRP 13 N ? ? B DLE 12 B TRP 13 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale26 covale both ? B TRP 13 C ? ? ? 1_555 B DLE 14 N ? ? B TRP 13 B DLE 14 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale27 covale both ? B DLE 14 C ? ? ? 1_555 B TRP 15 N ? ? B DLE 14 B TRP 15 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale28 covale both ? B TRP 15 C ? ? ? 1_555 B ETA 16 N B ? B TRP 15 B ETA 16 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale29 covale both ? B TRP 15 C ? ? ? 1_555 B ETA 16 N A ? B TRP 15 B ETA 16 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale30 covale none ? O MOH . O ? ? ? 1_555 P MOH . C ? ? B MOH 502 B MOH 503 1_555 ? ? ? ? ? ? ? 1.153 ? ? covale31 covale none ? Q MOH . O ? ? ? 1_555 X MOH . O ? ? B MOH 508 D MOH 509 1_555 ? ? ? ? ? ? ? 1.583 ? ? covale32 covale none ? Q MOH . O ? ? ? 1_555 X MOH . C ? ? B MOH 508 D MOH 509 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale33 covale both ? C FVA 1 C ? ? ? 1_555 C GLY 2 N ? ? C FVA 1 C GLY 2 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale34 covale both ? C ALA 3 C ? ? ? 1_555 C DLE 4 N ? ? C ALA 3 C DLE 4 1_555 ? ? ? ? ? ? ? 1.298 ? ? covale35 covale both ? C DLE 4 C ? ? ? 1_555 C ALA 5 N ? ? C DLE 4 C ALA 5 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale36 covale both ? C ALA 5 C ? ? ? 1_555 C DVA 6 N ? ? C ALA 5 C DVA 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale37 covale both ? C DVA 6 C ? ? ? 1_555 C VAL 7 N ? ? C DVA 6 C VAL 7 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale38 covale both ? C VAL 7 C ? ? ? 1_555 C DVA 8 N ? ? C VAL 7 C DVA 8 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale39 covale both ? C DVA 8 C ? ? ? 1_555 C TRP 9 N ? ? C DVA 8 C TRP 9 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale40 covale both ? C TRP 9 C ? ? ? 1_555 C DLE 10 N ? ? C TRP 9 C DLE 10 1_555 ? ? ? ? ? ? ? 1.303 ? ? covale41 covale both ? C DLE 10 C ? ? ? 1_555 C TRP 11 N ? ? C DLE 10 C TRP 11 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale42 covale both ? C TRP 11 C ? ? ? 1_555 C DLE 12 N ? ? C TRP 11 C DLE 12 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale43 covale both ? C DLE 12 C ? ? ? 1_555 C TRP 13 N ? ? C DLE 12 C TRP 13 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale44 covale both ? C TRP 13 C ? ? ? 1_555 C DLE 14 N ? ? C TRP 13 C DLE 14 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale45 covale both ? C DLE 14 C ? ? ? 1_555 C TRP 15 N ? ? C DLE 14 C TRP 15 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale46 covale both ? C TRP 15 C ? ? ? 1_555 C ETA 16 N ? ? C TRP 15 C ETA 16 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale47 covale both ? D FVA 1 C ? ? ? 1_555 D GLY 2 N ? ? D FVA 1 D GLY 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale48 covale both ? D ALA 3 C ? ? ? 1_555 D DLE 4 N ? ? D ALA 3 D DLE 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale49 covale both ? D DLE 4 C ? ? ? 1_555 D ALA 5 N ? ? D DLE 4 D ALA 5 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale50 covale both ? D ALA 5 C ? ? ? 1_555 D DVA 6 N ? ? D ALA 5 D DVA 6 1_555 ? ? ? ? ? ? ? 1.304 ? ? covale51 covale both ? D DVA 6 C ? ? ? 1_555 D VAL 7 N ? ? D DVA 6 D VAL 7 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale52 covale both ? D VAL 7 C ? ? ? 1_555 D DVA 8 N ? ? D VAL 7 D DVA 8 1_555 ? ? ? ? ? ? ? 1.306 ? ? covale53 covale both ? D DVA 8 C ? ? ? 1_555 D TRP 9 N ? ? D DVA 8 D TRP 9 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale54 covale both ? D TRP 9 C ? ? ? 1_555 D DLE 10 N ? ? D TRP 9 D DLE 10 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale55 covale both ? D DLE 10 C ? ? ? 1_555 D TRP 11 N ? ? D DLE 10 D TRP 11 1_555 ? ? ? ? ? ? ? 1.304 ? ? covale56 covale both ? D TRP 11 C ? ? ? 1_555 D DLE 12 N ? ? D TRP 11 D DLE 12 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale57 covale both ? D DLE 12 C ? ? ? 1_555 D TRP 13 N ? ? D DLE 12 D TRP 13 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale58 covale both ? D TRP 13 C ? ? ? 1_555 D DLE 14 N ? ? D TRP 13 D DLE 14 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale59 covale both ? D DLE 14 C ? ? ? 1_555 D TRP 15 N ? ? D DLE 14 D TRP 15 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale60 covale both ? D TRP 15 C ? ? ? 1_555 D ETA 16 N ? ? D TRP 15 D ETA 16 1_555 ? ? ? ? ? ? ? 1.312 ? ? metalc1 metalc ? ? E CS . CS ? ? ? 1_555 B GLY 2 O ? ? A CS 17 B GLY 2 1_555 ? ? ? ? ? ? ? 3.470 ? ? metalc2 metalc ? ? E CS . CS ? ? ? 1_555 L CS . CS ? ? A CS 17 B CS 17 1_555 ? ? ? ? ? ? ? 1.930 ? ? metalc3 metalc ? ? F CS . CS ? ? ? 1_555 Z HOH . O ? ? A CS 18 B HOH 2002 1_555 ? ? ? ? ? ? ? 2.523 ? ? metalc4 metalc ? ? F CS . CS ? ? ? 1_555 Z HOH . O ? ? A CS 18 B HOH 2004 1_555 ? ? ? ? ? ? ? 3.318 ? ? metalc5 metalc ? ? F CS . CS ? ? ? 1_555 Z HOH . O ? ? A CS 18 B HOH 2006 1_555 ? ? ? ? ? ? ? 3.001 ? ? metalc6 metalc ? ? Y HOH . O ? ? ? 1_555 M CS . CS ? ? A HOH 2001 B CS 18 1_555 ? ? ? ? ? ? ? 2.692 ? ? metalc7 metalc ? ? B GLY 2 O ? ? ? 1_555 L CS . CS ? ? B GLY 2 B CS 17 1_555 ? ? ? ? ? ? ? 3.396 ? ? metalc8 metalc ? ? B ALA 5 O ? ? ? 1_555 L CS . CS ? ? B ALA 5 B CS 17 1_555 ? ? ? ? ? ? ? 3.307 ? ? metalc9 metalc ? ? B TRP 15 O ? ? ? 1_555 M CS . CS ? ? B TRP 15 B CS 18 1_555 ? ? ? ? ? ? ? 3.386 ? ? metalc10 metalc ? ? L CS . CS ? ? ? 1_555 Z HOH . O ? ? B CS 17 B HOH 2001 1_555 ? ? ? ? ? ? ? 3.485 ? ? metalc11 metalc ? ? M CS . CS ? ? ? 1_555 Z HOH . O ? ? B CS 18 B HOH 2006 1_555 ? ? ? ? ? ? ? 3.234 ? ? metalc12 metalc ? ? C ALA 5 O ? ? ? 1_555 U CS . CS ? ? C ALA 5 C CS 19 1_555 ? ? ? ? ? ? ? 3.350 ? ? metalc13 metalc ? ? S CS . CS ? ? ? 1_555 D DLE 4 O ? ? C CS 17 D DLE 4 1_555 ? ? ? ? ? ? ? 3.421 ? ? metalc14 metalc ? ? S CS . CS ? ? ? 1_555 BA HOH . O ? ? C CS 17 D HOH 2001 1_555 ? ? ? ? ? ? ? 2.658 ? ? metalc15 metalc ? ? S CS . CS ? ? ? 1_555 BA HOH . O ? ? C CS 17 D HOH 2004 1_555 ? ? ? ? ? ? ? 3.345 ? ? metalc16 metalc ? ? T CS . CS ? ? ? 1_555 BA HOH . O ? ? C CS 18 D HOH 2004 1_555 ? ? ? ? ? ? ? 3.316 ? ? metalc17 metalc ? ? T CS . CS ? ? ? 1_555 BA HOH . O ? ? C CS 18 D HOH 2005 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc18 metalc ? ? T CS . CS ? ? ? 1_555 BA HOH . O ? ? C CS 18 D HOH 2007 1_555 ? ? ? ? ? ? ? 3.001 ? ? metalc19 metalc ? ? U CS . CS ? ? ? 1_555 BA HOH . O ? ? C CS 19 D HOH 2009 1_555 ? ? ? ? ? ? ? 2.888 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B GLY 2 ? B GLY 2 ? 1_555 CS ? E CS . ? A CS 17 ? 1_555 CS ? L CS . ? B CS 17 ? 1_555 71.6 ? 2 O ? Z HOH . ? B HOH 2002 ? 1_555 CS ? F CS . ? A CS 18 ? 1_555 O ? Z HOH . ? B HOH 2004 ? 1_555 4.8 ? 3 O ? Z HOH . ? B HOH 2002 ? 1_555 CS ? F CS . ? A CS 18 ? 1_555 O ? Z HOH . ? B HOH 2006 ? 1_555 160.6 ? 4 O ? Z HOH . ? B HOH 2004 ? 1_555 CS ? F CS . ? A CS 18 ? 1_555 O ? Z HOH . ? B HOH 2006 ? 1_555 163.1 ? 5 O ? Y HOH . ? A HOH 2001 ? 1_555 CS ? M CS . ? B CS 18 ? 1_555 O ? B TRP 15 ? B TRP 15 ? 1_555 82.0 ? 6 O ? Y HOH . ? A HOH 2001 ? 1_555 CS ? M CS . ? B CS 18 ? 1_555 O ? Z HOH . ? B HOH 2006 ? 1_555 160.4 ? 7 O ? B TRP 15 ? B TRP 15 ? 1_555 CS ? M CS . ? B CS 18 ? 1_555 O ? Z HOH . ? B HOH 2006 ? 1_555 112.8 ? 8 O ? B GLY 2 ? B GLY 2 ? 1_555 CS ? L CS . ? B CS 17 ? 1_555 O ? B ALA 5 ? B ALA 5 ? 1_555 155.2 ? 9 O ? B GLY 2 ? B GLY 2 ? 1_555 CS ? L CS . ? B CS 17 ? 1_555 O ? Z HOH . ? B HOH 2001 ? 1_555 86.0 ? 10 O ? B ALA 5 ? B ALA 5 ? 1_555 CS ? L CS . ? B CS 17 ? 1_555 O ? Z HOH . ? B HOH 2001 ? 1_555 72.2 ? 11 O ? C ALA 5 ? C ALA 5 ? 1_555 CS ? U CS . ? C CS 19 ? 1_555 O ? BA HOH . ? D HOH 2009 ? 1_555 73.1 ? 12 O ? D DLE 4 ? D DLE 4 ? 1_555 CS ? S CS . ? C CS 17 ? 1_555 O ? BA HOH . ? D HOH 2001 ? 1_555 94.5 ? 13 O ? D DLE 4 ? D DLE 4 ? 1_555 CS ? S CS . ? C CS 17 ? 1_555 O ? BA HOH . ? D HOH 2004 ? 1_555 77.5 ? 14 O ? BA HOH . ? D HOH 2001 ? 1_555 CS ? S CS . ? C CS 17 ? 1_555 O ? BA HOH . ? D HOH 2004 ? 1_555 171.5 ? 15 O ? BA HOH . ? D HOH 2004 ? 1_555 CS ? T CS . ? C CS 18 ? 1_555 O ? BA HOH . ? D HOH 2005 ? 1_555 3.9 ? 16 O ? BA HOH . ? D HOH 2004 ? 1_555 CS ? T CS . ? C CS 18 ? 1_555 O ? BA HOH . ? D HOH 2007 ? 1_555 165.0 ? 17 O ? BA HOH . ? D HOH 2005 ? 1_555 CS ? T CS . ? C CS 18 ? 1_555 O ? BA HOH . ? D HOH 2007 ? 1_555 162.1 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 FVA A 1 ? . . . . FVA A 1 ? 1_555 . . . . . . . VAL 1 FVA Formylation 'Named protein modification' 2 FVA B 1 ? . . . . FVA B 1 ? 1_555 . . . . . . . VAL 1 FVA Formylation 'Named protein modification' 3 FVA C 1 ? . . . . FVA C 1 ? 1_555 . . . . . . . VAL 1 FVA Formylation 'Named protein modification' 4 FVA D 1 ? . . . . FVA D 1 ? 1_555 . . . . . . . VAL 1 FVA Formylation 'Named protein modification' 5 ETA A 16 ? . . . . ETA A 16 ? 1_555 . . . . . . . ? 1 ETA None 'Non-standard residue' 6 ETA B 16 A . . . . ETA B 16 ? 1_555 . . . . . . . ? 1 ETA None 'Non-standard residue' 7 ETA B 16 B . . . . ETA B 16 ? 1_555 . . . . . . . ? 1 ETA None 'Non-standard residue' 8 ETA C 16 ? . . . . ETA C 16 ? 1_555 . . . . . . . ? 1 ETA None 'Non-standard residue' 9 ETA D 16 ? . . . . ETA D 16 ? 1_555 . . . . . . . ? 1 ETA None 'Non-standard residue' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? CA ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel CA 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 2 ? TRP A 15 ? GLY A 2 TRP A 15 AA 2 GLY B 2 ? TRP B 15 ? GLY B 2 TRP B 15 CA 1 GLY C 2 ? TRP C 15 ? GLY C 2 TRP C 15 CA 2 GLY D 2 ? TRP D 15 ? GLY D 2 TRP D 15 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N DLE A 14 ? N DLE A 14 O GLY B 2 ? O GLY B 2 CA 1 2 N DLE C 14 ? N DLE C 14 O GLY D 2 ? O GLY D 2 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CS 17 ? 5 'BINDING SITE FOR RESIDUE CS A 17' AC2 Software A CS 18 ? 7 'BINDING SITE FOR RESIDUE CS A 18' AC3 Software A CL 19 ? 2 'BINDING SITE FOR RESIDUE CL A 19' AC4 Software B CS 17 ? 4 'BINDING SITE FOR RESIDUE CS B 17' AC5 Software B CS 18 ? 6 'BINDING SITE FOR RESIDUE CS B 18' AC6 Software B CL 19 ? 2 'BINDING SITE FOR RESIDUE CL B 19' AC7 Software C CS 17 ? 6 'BINDING SITE FOR RESIDUE CS C 17' AC8 Software C CS 18 ? 7 'BINDING SITE FOR RESIDUE CS C 18' AC9 Software C CS 19 ? 3 'BINDING SITE FOR RESIDUE CS C 19' BC1 Software C CL 20 ? 3 'BINDING SITE FOR RESIDUE CL C 20' BC2 Software D CL 17 ? 2 'BINDING SITE FOR RESIDUE CL D 17' BC3 Software ? ? ? ? 34 'BINDING SITE FOR CHAIN A OF GRAMICIDIN A' BC4 Software ? ? ? ? 29 'BINDING SITE FOR CHAIN B OF GRAMICIDIN A' BC5 Software ? ? ? ? 30 'BINDING SITE FOR CHAIN C OF GRAMICIDIN A' BC6 Software ? ? ? ? 34 'BINDING SITE FOR CHAIN D OF GRAMICIDIN A' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DLE A 14 ? DLE A 14 . ? 1_555 ? 2 AC1 5 GLY B 2 ? GLY B 2 . ? 1_555 ? 3 AC1 5 ALA B 5 ? ALA B 5 . ? 1_555 ? 4 AC1 5 CS L . ? CS B 17 . ? 1_555 ? 5 AC1 5 HOH Z . ? HOH B 2001 . ? 1_555 ? 6 AC2 7 DVA A 8 ? DVA A 8 . ? 1_555 ? 7 AC2 7 DLE A 10 ? DLE A 10 . ? 1_555 ? 8 AC2 7 DVA B 8 ? DVA B 8 . ? 1_555 ? 9 AC2 7 DLE B 10 ? DLE B 10 . ? 1_555 ? 10 AC2 7 TRP B 11 ? TRP B 11 . ? 1_555 ? 11 AC2 7 HOH Z . ? HOH B 2002 . ? 1_555 ? 12 AC2 7 HOH Z . ? HOH B 2006 . ? 1_555 ? 13 AC3 2 DLE A 4 ? DLE A 4 . ? 1_555 ? 14 AC3 2 ALA A 5 ? ALA A 5 . ? 1_555 ? 15 AC4 4 ETA A 16 ? ETA A 16 . ? 1_555 ? 16 AC4 4 CS E . ? CS A 17 . ? 1_555 ? 17 AC4 4 GLY B 2 ? GLY B 2 . ? 1_555 ? 18 AC4 4 ALA B 5 ? ALA B 5 . ? 1_555 ? 19 AC5 6 ALA A 5 ? ALA A 5 . ? 1_555 ? 20 AC5 6 VAL A 7 ? VAL A 7 . ? 1_555 ? 21 AC5 6 HOH Y . ? HOH A 2001 . ? 1_555 ? 22 AC5 6 DLE B 12 ? DLE B 12 . ? 1_555 ? 23 AC5 6 DLE B 14 ? DLE B 14 . ? 1_555 ? 24 AC5 6 TRP B 15 ? TRP B 15 . ? 1_555 ? 25 AC6 2 DLE B 4 ? DLE B 4 . ? 1_555 ? 26 AC6 2 ALA B 5 ? ALA B 5 . ? 1_555 ? 27 AC7 6 DLE C 14 ? DLE C 14 . ? 1_555 ? 28 AC7 6 TRP C 15 ? TRP C 15 . ? 1_555 ? 29 AC7 6 DLE D 4 ? DLE D 4 . ? 1_555 ? 30 AC7 6 ALA D 5 ? ALA D 5 . ? 1_555 ? 31 AC7 6 HOH BA . ? HOH D 2001 . ? 1_555 ? 32 AC7 6 HOH BA . ? HOH D 2002 . ? 1_555 ? 33 AC8 7 DVA C 8 ? DVA C 8 . ? 1_555 ? 34 AC8 7 DLE C 10 ? DLE C 10 . ? 1_555 ? 35 AC8 7 DVA D 8 ? DVA D 8 . ? 1_555 ? 36 AC8 7 DLE D 10 ? DLE D 10 . ? 1_555 ? 37 AC8 7 TRP D 11 ? TRP D 11 . ? 1_555 ? 38 AC8 7 HOH BA . ? HOH D 2005 . ? 1_555 ? 39 AC8 7 HOH BA . ? HOH D 2007 . ? 1_555 ? 40 AC9 3 ALA C 5 ? ALA C 5 . ? 1_555 ? 41 AC9 3 DLE D 14 ? DLE D 14 . ? 1_555 ? 42 AC9 3 HOH BA . ? HOH D 2009 . ? 1_555 ? 43 BC1 3 DLE C 4 ? DLE C 4 . ? 1_555 ? 44 BC1 3 ALA C 5 ? ALA C 5 . ? 1_555 ? 45 BC1 3 HOH BA . ? HOH D 2010 . ? 1_555 ? 46 BC2 2 DLE D 4 ? DLE D 4 . ? 1_555 ? 47 BC2 2 ALA D 5 ? ALA D 5 . ? 1_555 ? 48 BC3 34 CS E . ? CS A 17 . ? 1_555 ? 49 BC3 34 CS F . ? CS A 18 . ? 1_555 ? 50 BC3 34 CL G . ? CL A 19 . ? 1_555 ? 51 BC3 34 GLY B 2 ? GLY B 2 . ? 2_665 ? 52 BC3 34 GLY B 2 ? GLY B 2 . ? 1_555 ? 53 BC3 34 ALA B 3 ? ALA B 3 . ? 2_665 ? 54 BC3 34 ALA B 3 ? ALA B 3 . ? 1_555 ? 55 BC3 34 DLE B 4 ? DLE B 4 . ? 1_555 ? 56 BC3 34 ALA B 5 ? ALA B 5 . ? 1_555 ? 57 BC3 34 DVA B 6 ? DVA B 6 . ? 1_555 ? 58 BC3 34 VAL B 7 ? VAL B 7 . ? 1_555 ? 59 BC3 34 DVA B 8 ? DVA B 8 . ? 1_555 ? 60 BC3 34 TRP B 9 ? TRP B 9 . ? 1_555 ? 61 BC3 34 DLE B 10 ? DLE B 10 . ? 1_555 ? 62 BC3 34 TRP B 11 ? TRP B 11 . ? 1_555 ? 63 BC3 34 DLE B 12 ? DLE B 12 . ? 1_555 ? 64 BC3 34 TRP B 13 ? TRP B 13 . ? 1_555 ? 65 BC3 34 DLE B 14 ? DLE B 14 . ? 1_555 ? 66 BC3 34 TRP B 15 ? TRP B 15 . ? 1_555 ? 67 BC3 34 ETA B 16 ? ETA B 16 . ? 1_555 ? 68 BC3 34 CS L . ? CS B 17 . ? 1_555 ? 69 BC3 34 CS M . ? CS B 18 . ? 1_555 ? 70 BC3 34 DLE C 4 ? DLE C 4 . ? 1_555 ? 71 BC3 34 TRP C 9 ? TRP C 9 . ? 4_556 ? 72 BC3 34 TRP C 11 ? TRP C 11 . ? 1_555 ? 73 BC3 34 TRP C 13 ? TRP C 13 . ? 4_456 ? 74 BC3 34 DLE C 14 ? DLE C 14 . ? 1_565 ? 75 BC3 34 TRP C 15 ? TRP C 15 . ? 1_565 ? 76 BC3 34 ETA C 16 ? ETA C 16 . ? 4_556 ? 77 BC3 34 DLE D 4 ? DLE D 4 . ? 1_555 ? 78 BC3 34 DVA D 8 ? DVA D 8 . ? 1_565 ? 79 BC3 34 DLE D 10 ? DLE D 10 . ? 3_756 ? 80 BC3 34 TRP D 11 ? TRP D 11 . ? 1_555 ? 81 BC3 34 TRP D 15 ? TRP D 15 . ? 1_565 ? 82 BC4 29 GLY A 2 ? GLY A 2 . ? 2_664 ? 83 BC4 29 GLY A 2 ? GLY A 2 . ? 1_555 ? 84 BC4 29 ALA A 3 ? ALA A 3 . ? 2_664 ? 85 BC4 29 ALA A 3 ? ALA A 3 . ? 1_555 ? 86 BC4 29 DLE A 4 ? DLE A 4 . ? 1_555 ? 87 BC4 29 ALA A 5 ? ALA A 5 . ? 1_555 ? 88 BC4 29 DVA A 6 ? DVA A 6 . ? 1_555 ? 89 BC4 29 VAL A 7 ? VAL A 7 . ? 1_555 ? 90 BC4 29 DVA A 8 ? DVA A 8 . ? 1_555 ? 91 BC4 29 TRP A 9 ? TRP A 9 . ? 1_555 ? 92 BC4 29 DLE A 10 ? DLE A 10 . ? 1_555 ? 93 BC4 29 TRP A 11 ? TRP A 11 . ? 1_555 ? 94 BC4 29 DLE A 12 ? DLE A 12 . ? 1_555 ? 95 BC4 29 TRP A 13 ? TRP A 13 . ? 1_555 ? 96 BC4 29 DLE A 14 ? DLE A 14 . ? 1_555 ? 97 BC4 29 TRP A 15 ? TRP A 15 . ? 1_555 ? 98 BC4 29 ETA A 16 ? ETA A 16 . ? 1_555 ? 99 BC4 29 CS E . ? CS A 17 . ? 1_555 ? 100 BC4 29 CS F . ? CS A 18 . ? 1_555 ? 101 BC4 29 CS L . ? CS B 17 . ? 1_555 ? 102 BC4 29 CS M . ? CS B 18 . ? 1_555 ? 103 BC4 29 CL N . ? CL B 19 . ? 1_555 ? 104 BC4 29 DVA C 6 ? DVA C 6 . ? 3_756 ? 105 BC4 29 TRP C 11 ? TRP C 11 . ? 1_555 ? 106 BC4 29 TRP C 15 ? TRP C 15 . ? 1_565 ? 107 BC4 29 TRP D 11 ? TRP D 11 . ? 3_756 ? 108 BC4 29 TRP D 11 ? TRP D 11 . ? 1_555 ? 109 BC4 29 DLE D 14 ? DLE D 14 . ? 3_656 ? 110 BC4 29 TRP D 15 ? TRP D 15 . ? 1_565 ? 111 BC5 30 DLE A 4 ? DLE A 4 . ? 1_555 ? 112 BC5 30 TRP A 9 ? TRP A 9 . ? 4_456 ? 113 BC5 30 TRP A 11 ? TRP A 11 . ? 1_555 ? 114 BC5 30 TRP A 13 ? TRP A 13 . ? 4_556 ? 115 BC5 30 DLE A 14 ? DLE A 14 . ? 1_545 ? 116 BC5 30 TRP A 15 ? TRP A 15 . ? 1_545 ? 117 BC5 30 TRP A 15 ? TRP A 15 . ? 4_456 ? 118 BC5 30 TRP B 11 ? TRP B 11 . ? 1_555 ? 119 BC5 30 TRP B 13 ? TRP B 13 . ? 3_746 ? 120 BC5 30 CS S . ? CS C 17 . ? 1_555 ? 121 BC5 30 CS T . ? CS C 18 . ? 1_555 ? 122 BC5 30 CS U . ? CS C 19 . ? 1_555 ? 123 BC5 30 CL V . ? CL C 20 . ? 1_555 ? 124 BC5 30 GLY D 2 ? GLY D 2 . ? 2_655 ? 125 BC5 30 GLY D 2 ? GLY D 2 . ? 1_555 ? 126 BC5 30 ALA D 3 ? ALA D 3 . ? 1_555 ? 127 BC5 30 ALA D 3 ? ALA D 3 . ? 2_655 ? 128 BC5 30 DLE D 4 ? DLE D 4 . ? 1_555 ? 129 BC5 30 ALA D 5 ? ALA D 5 . ? 1_555 ? 130 BC5 30 DVA D 6 ? DVA D 6 . ? 1_555 ? 131 BC5 30 VAL D 7 ? VAL D 7 . ? 1_555 ? 132 BC5 30 DVA D 8 ? DVA D 8 . ? 1_555 ? 133 BC5 30 TRP D 9 ? TRP D 9 . ? 1_555 ? 134 BC5 30 DLE D 10 ? DLE D 10 . ? 1_555 ? 135 BC5 30 TRP D 11 ? TRP D 11 . ? 1_555 ? 136 BC5 30 DLE D 12 ? DLE D 12 . ? 1_555 ? 137 BC5 30 TRP D 13 ? TRP D 13 . ? 1_555 ? 138 BC5 30 DLE D 14 ? DLE D 14 . ? 1_555 ? 139 BC5 30 TRP D 15 ? TRP D 15 . ? 1_555 ? 140 BC5 30 ETA D 16 ? ETA D 16 . ? 1_555 ? 141 BC6 34 VAL A 7 ? VAL A 7 . ? 1_545 ? 142 BC6 34 TRP A 11 ? TRP A 11 . ? 1_555 ? 143 BC6 34 DLE A 14 ? DLE A 14 . ? 1_545 ? 144 BC6 34 TRP B 11 ? TRP B 11 . ? 3_646 ? 145 BC6 34 DLE B 12 ? DLE B 12 . ? 1_555 ? 146 BC6 34 DLE B 14 ? DLE B 14 . ? 3_746 ? 147 BC6 34 TRP B 15 ? TRP B 15 . ? 1_545 ? 148 BC6 34 ETA B 16 ? ETA B 16 . ? 1_545 ? 149 BC6 34 HOH Z . ? HOH B 2005 . ? 1_545 ? 150 BC6 34 GLY C 2 ? GLY C 2 . ? 1_555 ? 151 BC6 34 GLY C 2 ? GLY C 2 . ? 2_654 ? 152 BC6 34 ALA C 3 ? ALA C 3 . ? 2_654 ? 153 BC6 34 ALA C 3 ? ALA C 3 . ? 1_555 ? 154 BC6 34 DLE C 4 ? DLE C 4 . ? 1_555 ? 155 BC6 34 ALA C 5 ? ALA C 5 . ? 1_555 ? 156 BC6 34 DVA C 6 ? DVA C 6 . ? 1_555 ? 157 BC6 34 VAL C 7 ? VAL C 7 . ? 1_555 ? 158 BC6 34 DVA C 8 ? DVA C 8 . ? 1_555 ? 159 BC6 34 TRP C 9 ? TRP C 9 . ? 1_555 ? 160 BC6 34 DLE C 10 ? DLE C 10 . ? 1_555 ? 161 BC6 34 TRP C 11 ? TRP C 11 . ? 1_555 ? 162 BC6 34 DLE C 12 ? DLE C 12 . ? 1_555 ? 163 BC6 34 TRP C 13 ? TRP C 13 . ? 1_555 ? 164 BC6 34 DLE C 14 ? DLE C 14 . ? 1_555 ? 165 BC6 34 TRP C 15 ? TRP C 15 . ? 1_555 ? 166 BC6 34 ETA C 16 ? ETA C 16 . ? 1_555 ? 167 BC6 34 CS S . ? CS C 17 . ? 1_555 ? 168 BC6 34 CS T . ? CS C 18 . ? 1_555 ? 169 BC6 34 CS U . ? CS C 19 . ? 1_555 ? 170 BC6 34 CL W . ? CL D 17 . ? 1_555 ? 171 BC6 34 HOH BA . ? HOH D 2002 . ? 1_555 ? 172 BC6 34 HOH BA . ? HOH D 2003 . ? 1_555 ? 173 BC6 34 HOH BA . ? HOH D 2008 . ? 1_555 ? 174 BC6 34 HOH BA . ? HOH D 2011 . ? 1_555 ? # _pdbx_entry_details.entry_id 1AV2 _pdbx_entry_details.compound_details ;GRAMICIDIN IS A HETEROGENEOUS MIXTURE OF SEVERAL COMPOUNDS INCLUDING GRAMICIDIN A, B AND C WHICH ARE OBTAINED FROM BACILLUS BREVIS AND CALLED COLLECTIVELY GRAMICIDIN D HERE, GRAMICIDIN A IS REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HD22 A DLE 4 ? ? HD21 C DLE 4 ? B 1.13 2 1 CL C CL 20 ? ? O D HOH 2010 ? ? 2.03 # _pdbx_molecule_features.prd_id PRD_000150 _pdbx_molecule_features.name 'GRAMICIDIN A' _pdbx_molecule_features.type Polypeptide _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;GRAMICIDIN A IS A HEXADECAMERIC HELICAL PEPTIDE WITH ALTERNATING D,L CHARACTERISTICS. THE N-TERM IS FORMYLATED (RESIDUE 0). THE C-TERM IS CAPPED WITH ETHANOLAMINE (RESIDUE 16). ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000150 A 2 PRD_000150 B 3 PRD_000150 C 4 PRD_000150 D # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 CL CL CL N N 14 CS CS CS N N 15 DLE N N N N 16 DLE CA C N R 17 DLE CB C N N 18 DLE CG C N N 19 DLE CD1 C N N 20 DLE CD2 C N N 21 DLE C C N N 22 DLE O O N N 23 DLE OXT O N N 24 DLE H H N N 25 DLE H2 H N N 26 DLE HA H N N 27 DLE HB2 H N N 28 DLE HB3 H N N 29 DLE HG H N N 30 DLE HD11 H N N 31 DLE HD12 H N N 32 DLE HD13 H N N 33 DLE HD21 H N N 34 DLE HD22 H N N 35 DLE HD23 H N N 36 DLE HXT H N N 37 DVA N N N N 38 DVA CA C N R 39 DVA CB C N N 40 DVA CG1 C N N 41 DVA CG2 C N N 42 DVA C C N N 43 DVA O O N N 44 DVA OXT O N N 45 DVA H H N N 46 DVA H2 H N N 47 DVA HA H N N 48 DVA HB H N N 49 DVA HG11 H N N 50 DVA HG12 H N N 51 DVA HG13 H N N 52 DVA HG21 H N N 53 DVA HG22 H N N 54 DVA HG23 H N N 55 DVA HXT H N N 56 ETA CA C N N 57 ETA N N N N 58 ETA C C N N 59 ETA O O N N 60 ETA HA1 H N N 61 ETA HA2 H N N 62 ETA H H N N 63 ETA H2 H N N 64 ETA HB1 H N N 65 ETA HB2 H N N 66 ETA HO H N N 67 FVA C C N N 68 FVA N N N N 69 FVA O O N N 70 FVA CA C N S 71 FVA CB C N N 72 FVA CG1 C N N 73 FVA CG2 C N N 74 FVA H H N N 75 FVA HA H N N 76 FVA HB H N N 77 FVA HG11 H N N 78 FVA HG12 H N N 79 FVA HG13 H N N 80 FVA HG21 H N N 81 FVA HG22 H N N 82 FVA HG23 H N N 83 FVA O1 O N N 84 FVA CN C N N 85 FVA HN H N N 86 FVA OXT O N N 87 FVA HXT H N N 88 GLY N N N N 89 GLY CA C N N 90 GLY C C N N 91 GLY O O N N 92 GLY OXT O N N 93 GLY H H N N 94 GLY H2 H N N 95 GLY HA2 H N N 96 GLY HA3 H N N 97 GLY HXT H N N 98 HOH O O N N 99 HOH H1 H N N 100 HOH H2 H N N 101 MOH C C N N 102 MOH O O N N 103 MOH H1 H N N 104 MOH H2 H N N 105 MOH H3 H N N 106 MOH HO H N N 107 TRP N N N N 108 TRP CA C N S 109 TRP C C N N 110 TRP O O N N 111 TRP CB C N N 112 TRP CG C Y N 113 TRP CD1 C Y N 114 TRP CD2 C Y N 115 TRP NE1 N Y N 116 TRP CE2 C Y N 117 TRP CE3 C Y N 118 TRP CZ2 C Y N 119 TRP CZ3 C Y N 120 TRP CH2 C Y N 121 TRP OXT O N N 122 TRP H H N N 123 TRP H2 H N N 124 TRP HA H N N 125 TRP HB2 H N N 126 TRP HB3 H N N 127 TRP HD1 H N N 128 TRP HE1 H N N 129 TRP HE3 H N N 130 TRP HZ2 H N N 131 TRP HZ3 H N N 132 TRP HH2 H N N 133 TRP HXT H N N 134 VAL N N N N 135 VAL CA C N S 136 VAL C C N N 137 VAL O O N N 138 VAL CB C N N 139 VAL CG1 C N N 140 VAL CG2 C N N 141 VAL OXT O N N 142 VAL H H N N 143 VAL H2 H N N 144 VAL HA H N N 145 VAL HB H N N 146 VAL HG11 H N N 147 VAL HG12 H N N 148 VAL HG13 H N N 149 VAL HG21 H N N 150 VAL HG22 H N N 151 VAL HG23 H N N 152 VAL HXT H N N 153 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 DLE N CA sing N N 13 DLE N H sing N N 14 DLE N H2 sing N N 15 DLE CA CB sing N N 16 DLE CA C sing N N 17 DLE CA HA sing N N 18 DLE CB CG sing N N 19 DLE CB HB2 sing N N 20 DLE CB HB3 sing N N 21 DLE CG CD1 sing N N 22 DLE CG CD2 sing N N 23 DLE CG HG sing N N 24 DLE CD1 HD11 sing N N 25 DLE CD1 HD12 sing N N 26 DLE CD1 HD13 sing N N 27 DLE CD2 HD21 sing N N 28 DLE CD2 HD22 sing N N 29 DLE CD2 HD23 sing N N 30 DLE C O doub N N 31 DLE C OXT sing N N 32 DLE OXT HXT sing N N 33 DVA N CA sing N N 34 DVA N H sing N N 35 DVA N H2 sing N N 36 DVA CA CB sing N N 37 DVA CA C sing N N 38 DVA CA HA sing N N 39 DVA CB CG1 sing N N 40 DVA CB CG2 sing N N 41 DVA CB HB sing N N 42 DVA CG1 HG11 sing N N 43 DVA CG1 HG12 sing N N 44 DVA CG1 HG13 sing N N 45 DVA CG2 HG21 sing N N 46 DVA CG2 HG22 sing N N 47 DVA CG2 HG23 sing N N 48 DVA C O doub N N 49 DVA C OXT sing N N 50 DVA OXT HXT sing N N 51 ETA CA N sing N N 52 ETA CA C sing N N 53 ETA CA HA1 sing N N 54 ETA CA HA2 sing N N 55 ETA N H sing N N 56 ETA N H2 sing N N 57 ETA C O sing N N 58 ETA C HB1 sing N N 59 ETA C HB2 sing N N 60 ETA O HO sing N N 61 FVA O C doub N N 62 FVA C CA sing N N 63 FVA H N sing N N 64 FVA N CN sing N N 65 FVA N CA sing N N 66 FVA CB CA sing N N 67 FVA CA HA sing N N 68 FVA HB CB sing N N 69 FVA CB CG2 sing N N 70 FVA CB CG1 sing N N 71 FVA HG13 CG1 sing N N 72 FVA HG12 CG1 sing N N 73 FVA CG1 HG11 sing N N 74 FVA HG22 CG2 sing N N 75 FVA HG23 CG2 sing N N 76 FVA CG2 HG21 sing N N 77 FVA CN O1 doub N N 78 FVA HN CN sing N N 79 FVA C OXT sing N N 80 FVA OXT HXT sing N N 81 GLY N CA sing N N 82 GLY N H sing N N 83 GLY N H2 sing N N 84 GLY CA C sing N N 85 GLY CA HA2 sing N N 86 GLY CA HA3 sing N N 87 GLY C O doub N N 88 GLY C OXT sing N N 89 GLY OXT HXT sing N N 90 HOH O H1 sing N N 91 HOH O H2 sing N N 92 MOH C O sing N N 93 MOH C H1 sing N N 94 MOH C H2 sing N N 95 MOH C H3 sing N N 96 MOH O HO sing N N 97 TRP N CA sing N N 98 TRP N H sing N N 99 TRP N H2 sing N N 100 TRP CA C sing N N 101 TRP CA CB sing N N 102 TRP CA HA sing N N 103 TRP C O doub N N 104 TRP C OXT sing N N 105 TRP CB CG sing N N 106 TRP CB HB2 sing N N 107 TRP CB HB3 sing N N 108 TRP CG CD1 doub Y N 109 TRP CG CD2 sing Y N 110 TRP CD1 NE1 sing Y N 111 TRP CD1 HD1 sing N N 112 TRP CD2 CE2 doub Y N 113 TRP CD2 CE3 sing Y N 114 TRP NE1 CE2 sing Y N 115 TRP NE1 HE1 sing N N 116 TRP CE2 CZ2 sing Y N 117 TRP CE3 CZ3 doub Y N 118 TRP CE3 HE3 sing N N 119 TRP CZ2 CH2 doub Y N 120 TRP CZ2 HZ2 sing N N 121 TRP CZ3 CH2 sing Y N 122 TRP CZ3 HZ3 sing N N 123 TRP CH2 HH2 sing N N 124 TRP OXT HXT sing N N 125 VAL N CA sing N N 126 VAL N H sing N N 127 VAL N H2 sing N N 128 VAL CA C sing N N 129 VAL CA CB sing N N 130 VAL CA HA sing N N 131 VAL C O doub N N 132 VAL C OXT sing N N 133 VAL CB CG1 sing N N 134 VAL CB CG2 sing N N 135 VAL CB HB sing N N 136 VAL CG1 HG11 sing N N 137 VAL CG1 HG12 sing N N 138 VAL CG1 HG13 sing N N 139 VAL CG2 HG21 sing N N 140 VAL CG2 HG22 sing N N 141 VAL CG2 HG23 sing N N 142 VAL OXT HXT sing N N 143 # _pdbx_initial_refinement_model.accession_code 1C4D _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'HOME-MADE MODEL' # _atom_sites.entry_id 1AV2 _atom_sites.fract_transf_matrix[1][1] 0.032196 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.031368 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019190 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL CS H N O # loop_