data_1AY2
#
_entry.id 1AY2
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1AY2 pdb_00001ay2 10.2210/pdb1ay2/pdb
WWPDB D_1000171396 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1998-04-29
2 'Structure model' 1 1 2008-03-24
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2020-07-29
5 'Structure model' 3 0 2023-02-15
6 'Structure model' 3 1 2024-11-13
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Non-polymer description'
3 3 'Structure model' 'Version format compliance'
4 4 'Structure model' 'Atomic model'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Derived calculations'
7 4 'Structure model' 'Refinement description'
8 4 'Structure model' 'Structure summary'
9 5 'Structure model' Advisory
10 5 'Structure model' 'Atomic model'
11 5 'Structure model' 'Data collection'
12 5 'Structure model' 'Database references'
13 5 'Structure model' 'Derived calculations'
14 5 'Structure model' 'Non-polymer description'
15 5 'Structure model' 'Polymer sequence'
16 5 'Structure model' 'Structure summary'
17 6 'Structure model' 'Data collection'
18 6 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' chem_comp
3 4 'Structure model' entity
4 4 'Structure model' pdbx_branch_scheme
5 4 'Structure model' pdbx_chem_comp_identifier
6 4 'Structure model' pdbx_entity_branch
7 4 'Structure model' pdbx_entity_branch_descriptor
8 4 'Structure model' pdbx_entity_branch_link
9 4 'Structure model' pdbx_entity_branch_list
10 4 'Structure model' pdbx_entity_nonpoly
11 4 'Structure model' pdbx_nonpoly_scheme
12 4 'Structure model' pdbx_struct_assembly_gen
13 4 'Structure model' pdbx_struct_conn_angle
14 4 'Structure model' pdbx_struct_special_symmetry
15 4 'Structure model' software
16 4 'Structure model' struct_asym
17 4 'Structure model' struct_conn
18 4 'Structure model' struct_site
19 4 'Structure model' struct_site_gen
20 5 'Structure model' atom_site
21 5 'Structure model' chem_comp
22 5 'Structure model' database_2
23 5 'Structure model' entity
24 5 'Structure model' entity_poly
25 5 'Structure model' entity_poly_seq
26 5 'Structure model' pdbx_poly_seq_scheme
27 5 'Structure model' pdbx_struct_mod_residue
28 5 'Structure model' pdbx_unobs_or_zero_occ_atoms
29 5 'Structure model' pdbx_validate_rmsd_angle
30 5 'Structure model' struct_conn
31 6 'Structure model' chem_comp_atom
32 6 'Structure model' chem_comp_bond
33 6 'Structure model' pdbx_entry_details
34 6 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.B_iso_or_equiv'
2 4 'Structure model' '_atom_site.Cartn_x'
3 4 'Structure model' '_atom_site.Cartn_y'
4 4 'Structure model' '_atom_site.Cartn_z'
5 4 'Structure model' '_atom_site.auth_asym_id'
6 4 'Structure model' '_atom_site.auth_atom_id'
7 4 'Structure model' '_atom_site.auth_comp_id'
8 4 'Structure model' '_atom_site.auth_seq_id'
9 4 'Structure model' '_atom_site.label_asym_id'
10 4 'Structure model' '_atom_site.label_atom_id'
11 4 'Structure model' '_atom_site.label_comp_id'
12 4 'Structure model' '_atom_site.label_entity_id'
13 4 'Structure model' '_atom_site.occupancy'
14 4 'Structure model' '_atom_site.type_symbol'
15 4 'Structure model' '_chem_comp.name'
16 4 'Structure model' '_chem_comp.type'
17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry'
25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry'
33 4 'Structure model' '_pdbx_struct_conn_angle.value'
34 4 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
35 4 'Structure model' '_software.name'
36 4 'Structure model' '_struct_conn.conn_type_id'
37 4 'Structure model' '_struct_conn.id'
38 4 'Structure model' '_struct_conn.pdbx_dist_value'
39 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
40 4 'Structure model' '_struct_conn.pdbx_role'
41 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
42 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
43 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
44 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
45 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
46 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
47 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
48 4 'Structure model' '_struct_conn.ptnr1_symmetry'
49 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
50 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
51 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
52 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
53 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
54 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
55 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'
56 4 'Structure model' '_struct_conn.ptnr2_symmetry'
57 5 'Structure model' '_atom_site.B_iso_or_equiv'
58 5 'Structure model' '_atom_site.Cartn_x'
59 5 'Structure model' '_atom_site.Cartn_y'
60 5 'Structure model' '_atom_site.Cartn_z'
61 5 'Structure model' '_atom_site.auth_atom_id'
62 5 'Structure model' '_atom_site.auth_comp_id'
63 5 'Structure model' '_atom_site.group_PDB'
64 5 'Structure model' '_atom_site.label_atom_id'
65 5 'Structure model' '_atom_site.label_comp_id'
66 5 'Structure model' '_atom_site.type_symbol'
67 5 'Structure model' '_chem_comp.formula'
68 5 'Structure model' '_chem_comp.formula_weight'
69 5 'Structure model' '_chem_comp.id'
70 5 'Structure model' '_chem_comp.mon_nstd_flag'
71 5 'Structure model' '_chem_comp.name'
72 5 'Structure model' '_chem_comp.pdbx_synonyms'
73 5 'Structure model' '_chem_comp.type'
74 5 'Structure model' '_database_2.pdbx_DOI'
75 5 'Structure model' '_database_2.pdbx_database_accession'
76 5 'Structure model' '_entity.formula_weight'
77 5 'Structure model' '_entity_poly.nstd_monomer'
78 5 'Structure model' '_entity_poly.pdbx_seq_one_letter_code'
79 5 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can'
80 5 'Structure model' '_entity_poly_seq.mon_id'
81 5 'Structure model' '_pdbx_poly_seq_scheme.mon_id'
82 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id'
83 5 'Structure model' '_pdbx_struct_mod_residue.auth_comp_id'
84 5 'Structure model' '_pdbx_struct_mod_residue.label_comp_id'
85 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
86 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
87 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1AY2
_pdbx_database_status.recvd_initial_deposition_date 1997-11-13
_pdbx_database_status.deposit_site ?
_pdbx_database_status.process_site BNL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Forest, K.T.' 1
'Parge, H.E.' 2
'Tainer, J.A.' 3
#
_citation.id primary
_citation.title 'Structure of the fibre-forming protein pilin at 2.6 A resolution.'
_citation.journal_abbrev Nature
_citation.journal_volume 378
_citation.page_first 32
_citation.page_last 38
_citation.year 1995
_citation.journal_id_ASTM NATUAS
_citation.country UK
_citation.journal_id_ISSN 0028-0836
_citation.journal_id_CSD 0006
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 7477282
_citation.pdbx_database_id_DOI 10.1038/378032a0
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Parge, H.E.' 1 ?
primary 'Forest, K.T.' 2 ?
primary 'Hickey, M.J.' 3 ?
primary 'Christensen, D.A.' 4 ?
primary 'Getzoff, E.D.' 5 ?
primary 'Tainer, J.A.' 6 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'TYPE 4 PILIN' 17192.477 1 ? ? ? ?
2 branched man 'alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose' 383.349 1 ? ? ? ?
3 non-polymer syn 'PLATINUM (II) ION' 195.078 1 ? ? ? ?
4 non-polymer syn HEPTANE-1,2,3-TRIOL 148.200 1 ? ? ? ?
5 water nat water 18.015 129 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name FIMBRIAE
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPPSDIKGKYVKE
VEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFDAK
;
_entity_poly.pdbx_seq_one_letter_code_can
;FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPPSDIKGKYVKE
VEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFDAK
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'PLATINUM (II) ION' PT
4 HEPTANE-1,2,3-TRIOL HTO
5 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 PHE n
1 2 THR n
1 3 LEU n
1 4 ILE n
1 5 GLU n
1 6 LEU n
1 7 MET n
1 8 ILE n
1 9 VAL n
1 10 ILE n
1 11 ALA n
1 12 ILE n
1 13 VAL n
1 14 GLY n
1 15 ILE n
1 16 LEU n
1 17 ALA n
1 18 ALA n
1 19 VAL n
1 20 ALA n
1 21 LEU n
1 22 PRO n
1 23 ALA n
1 24 TYR n
1 25 GLN n
1 26 ASP n
1 27 TYR n
1 28 THR n
1 29 ALA n
1 30 ARG n
1 31 ALA n
1 32 GLN n
1 33 VAL n
1 34 SER n
1 35 GLU n
1 36 ALA n
1 37 ILE n
1 38 LEU n
1 39 LEU n
1 40 ALA n
1 41 GLU n
1 42 GLY n
1 43 GLN n
1 44 LYS n
1 45 SER n
1 46 ALA n
1 47 VAL n
1 48 THR n
1 49 GLU n
1 50 TYR n
1 51 TYR n
1 52 LEU n
1 53 ASN n
1 54 HIS n
1 55 GLY n
1 56 LYS n
1 57 TRP n
1 58 PRO n
1 59 GLU n
1 60 ASN n
1 61 ASN n
1 62 THR n
1 63 SER n
1 64 ALA n
1 65 GLY n
1 66 VAL n
1 67 ALA n
1 68 SER n
1 69 PRO n
1 70 PRO n
1 71 SER n
1 72 ASP n
1 73 ILE n
1 74 LYS n
1 75 GLY n
1 76 LYS n
1 77 TYR n
1 78 VAL n
1 79 LYS n
1 80 GLU n
1 81 VAL n
1 82 GLU n
1 83 VAL n
1 84 LYS n
1 85 ASN n
1 86 GLY n
1 87 VAL n
1 88 VAL n
1 89 THR n
1 90 ALA n
1 91 THR n
1 92 MET n
1 93 LEU n
1 94 SER n
1 95 SER n
1 96 GLY n
1 97 VAL n
1 98 ASN n
1 99 ASN n
1 100 GLU n
1 101 ILE n
1 102 LYS n
1 103 GLY n
1 104 LYS n
1 105 LYS n
1 106 LEU n
1 107 SER n
1 108 LEU n
1 109 TRP n
1 110 ALA n
1 111 ARG n
1 112 ARG n
1 113 GLU n
1 114 ASN n
1 115 GLY n
1 116 SER n
1 117 VAL n
1 118 LYS n
1 119 TRP n
1 120 PHE n
1 121 CYS n
1 122 GLY n
1 123 GLN n
1 124 PRO n
1 125 VAL n
1 126 THR n
1 127 ARG n
1 128 THR n
1 129 ASP n
1 130 ASP n
1 131 ASP n
1 132 THR n
1 133 VAL n
1 134 ALA n
1 135 ASP n
1 136 ALA n
1 137 LYS n
1 138 ASP n
1 139 GLY n
1 140 LYS n
1 141 GLU n
1 142 ILE n
1 143 ASP n
1 144 THR n
1 145 LYS n
1 146 HIS n
1 147 LEU n
1 148 PRO n
1 149 SER n
1 150 THR n
1 151 CYS n
1 152 ARG n
1 153 ASP n
1 154 ASN n
1 155 PHE n
1 156 ASP n
1 157 ALA n
1 158 LYS n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Neisseria gonorrhoeae'
_entity_src_nat.pdbx_ncbi_taxonomy_id 485
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain MS11
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location EXTRACELLULAR
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle PILUS
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGalpa1-3DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1a_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0
3 2 '[]{[(3+1)][b-D-GlcpNAc]{[(3+1)][a-D-Galp]{}}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 2
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 GLA
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 NAG
_pdbx_entity_branch_link.atom_id_2 O3
_pdbx_entity_branch_link.leaving_atom_id_2 HO3
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLA 'D-saccharide, alpha linking' . alpha-D-galactopyranose
'alpha-D-galactose; D-galactose; galactose; ALPHA D-GALACTOSE' 'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
HTO non-polymer . HEPTANE-1,2,3-TRIOL ? 'C7 H16 O3' 148.200
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GLA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpa
GLA 'COMMON NAME' GMML 1.0 a-D-galactopyranose
GLA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Galp
GLA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 PHE 1 1 1 PHE PHE A . n
A 1 2 THR 2 2 2 THR THR A . n
A 1 3 LEU 3 3 3 LEU LEU A . n
A 1 4 ILE 4 4 4 ILE ILE A . n
A 1 5 GLU 5 5 5 GLU GLU A . n
A 1 6 LEU 6 6 6 LEU LEU A . n
A 1 7 MET 7 7 7 MET MET A . n
A 1 8 ILE 8 8 8 ILE ILE A . n
A 1 9 VAL 9 9 9 VAL VAL A . n
A 1 10 ILE 10 10 10 ILE ILE A . n
A 1 11 ALA 11 11 11 ALA ALA A . n
A 1 12 ILE 12 12 12 ILE ILE A . n
A 1 13 VAL 13 13 13 VAL VAL A . n
A 1 14 GLY 14 14 14 GLY GLY A . n
A 1 15 ILE 15 15 15 ILE ILE A . n
A 1 16 LEU 16 16 16 LEU LEU A . n
A 1 17 ALA 17 17 17 ALA ALA A . n
A 1 18 ALA 18 18 18 ALA ALA A . n
A 1 19 VAL 19 19 19 VAL VAL A . n
A 1 20 ALA 20 20 20 ALA ALA A . n
A 1 21 LEU 21 21 21 LEU LEU A . n
A 1 22 PRO 22 22 22 PRO PRO A . n
A 1 23 ALA 23 23 23 ALA ALA A . n
A 1 24 TYR 24 24 24 TYR TYR A . n
A 1 25 GLN 25 25 25 GLN GLN A . n
A 1 26 ASP 26 26 26 ASP ASP A . n
A 1 27 TYR 27 27 27 TYR TYR A . n
A 1 28 THR 28 28 28 THR THR A . n
A 1 29 ALA 29 29 29 ALA ALA A . n
A 1 30 ARG 30 30 30 ARG ARG A . n
A 1 31 ALA 31 31 31 ALA ALA A . n
A 1 32 GLN 32 32 32 GLN GLN A . n
A 1 33 VAL 33 33 33 VAL VAL A . n
A 1 34 SER 34 34 34 SER SER A . n
A 1 35 GLU 35 35 35 GLU GLU A . n
A 1 36 ALA 36 36 36 ALA ALA A . n
A 1 37 ILE 37 37 37 ILE ILE A . n
A 1 38 LEU 38 38 38 LEU LEU A . n
A 1 39 LEU 39 39 39 LEU LEU A . n
A 1 40 ALA 40 40 40 ALA ALA A . n
A 1 41 GLU 41 41 41 GLU GLU A . n
A 1 42 GLY 42 42 42 GLY GLY A . n
A 1 43 GLN 43 43 43 GLN GLN A . n
A 1 44 LYS 44 44 44 LYS LYS A . n
A 1 45 SER 45 45 45 SER SER A . n
A 1 46 ALA 46 46 46 ALA ALA A . n
A 1 47 VAL 47 47 47 VAL VAL A . n
A 1 48 THR 48 48 48 THR THR A . n
A 1 49 GLU 49 49 49 GLU GLU A . n
A 1 50 TYR 50 50 50 TYR TYR A . n
A 1 51 TYR 51 51 51 TYR TYR A . n
A 1 52 LEU 52 52 52 LEU LEU A . n
A 1 53 ASN 53 53 53 ASN ASN A . n
A 1 54 HIS 54 54 54 HIS HIS A . n
A 1 55 GLY 55 55 55 GLY GLY A . n
A 1 56 LYS 56 56 56 LYS LYS A . n
A 1 57 TRP 57 57 57 TRP TRP A . n
A 1 58 PRO 58 58 58 PRO PRO A . n
A 1 59 GLU 59 59 59 GLU GLU A . n
A 1 60 ASN 60 60 60 ASN ASN A . n
A 1 61 ASN 61 61 61 ASN ASN A . n
A 1 62 THR 62 62 62 THR THR A . n
A 1 63 SER 63 63 63 SER SER A . n
A 1 64 ALA 64 64 64 ALA ALA A . n
A 1 65 GLY 65 65 65 GLY GLY A . n
A 1 66 VAL 66 66 66 VAL VAL A . n
A 1 67 ALA 67 67 67 ALA ALA A . n
A 1 68 SER 68 68 68 SER SER A . n
A 1 69 PRO 69 69 69 PRO PRO A . n
A 1 70 PRO 70 70 70 PRO PRO A . n
A 1 71 SER 71 71 71 SER SER A . n
A 1 72 ASP 72 72 72 ASP ASP A . n
A 1 73 ILE 73 73 73 ILE ILE A . n
A 1 74 LYS 74 74 74 LYS LYS A . n
A 1 75 GLY 75 75 75 GLY GLY A . n
A 1 76 LYS 76 76 76 LYS LYS A . n
A 1 77 TYR 77 77 77 TYR TYR A . n
A 1 78 VAL 78 78 78 VAL VAL A . n
A 1 79 LYS 79 79 79 LYS LYS A . n
A 1 80 GLU 80 80 80 GLU GLU A . n
A 1 81 VAL 81 81 81 VAL VAL A . n
A 1 82 GLU 82 82 82 GLU GLU A . n
A 1 83 VAL 83 83 83 VAL VAL A . n
A 1 84 LYS 84 84 84 LYS LYS A . n
A 1 85 ASN 85 85 85 ASN ASN A . n
A 1 86 GLY 86 86 86 GLY GLY A . n
A 1 87 VAL 87 87 87 VAL VAL A . n
A 1 88 VAL 88 88 88 VAL VAL A . n
A 1 89 THR 89 89 89 THR THR A . n
A 1 90 ALA 90 90 90 ALA ALA A . n
A 1 91 THR 91 91 91 THR THR A . n
A 1 92 MET 92 92 92 MET MET A . n
A 1 93 LEU 93 93 93 LEU LEU A . n
A 1 94 SER 94 94 94 SER SER A . n
A 1 95 SER 95 95 95 SER SER A . n
A 1 96 GLY 96 96 96 GLY GLY A . n
A 1 97 VAL 97 97 97 VAL VAL A . n
A 1 98 ASN 98 98 98 ASN ASN A . n
A 1 99 ASN 99 99 99 ASN ASN A . n
A 1 100 GLU 100 100 100 GLU GLU A . n
A 1 101 ILE 101 101 101 ILE ILE A . n
A 1 102 LYS 102 102 102 LYS LYS A . n
A 1 103 GLY 103 103 103 GLY GLY A . n
A 1 104 LYS 104 104 104 LYS LYS A . n
A 1 105 LYS 105 105 105 LYS LYS A . n
A 1 106 LEU 106 106 106 LEU LEU A . n
A 1 107 SER 107 107 107 SER SER A . n
A 1 108 LEU 108 108 108 LEU LEU A . n
A 1 109 TRP 109 109 109 TRP TRP A . n
A 1 110 ALA 110 110 110 ALA ALA A . n
A 1 111 ARG 111 111 111 ARG ARG A . n
A 1 112 ARG 112 112 112 ARG ARG A . n
A 1 113 GLU 113 113 113 GLU GLU A . n
A 1 114 ASN 114 114 114 ASN ASN A . n
A 1 115 GLY 115 115 115 GLY GLY A . n
A 1 116 SER 116 116 116 SER SER A . n
A 1 117 VAL 117 117 117 VAL VAL A . n
A 1 118 LYS 118 118 118 LYS LYS A . n
A 1 119 TRP 119 119 119 TRP TRP A . n
A 1 120 PHE 120 120 120 PHE PHE A . n
A 1 121 CYS 121 121 121 CYS CYS A . n
A 1 122 GLY 122 122 122 GLY GLY A . n
A 1 123 GLN 123 123 123 GLN GLN A . n
A 1 124 PRO 124 124 124 PRO PRO A . n
A 1 125 VAL 125 125 125 VAL VAL A . n
A 1 126 THR 126 126 126 THR THR A . n
A 1 127 ARG 127 127 127 ARG ARG A . n
A 1 128 THR 128 128 128 THR THR A . n
A 1 129 ASP 129 129 129 ASP ASP A . n
A 1 130 ASP 130 130 130 ASP ASP A . n
A 1 131 ASP 131 131 131 ASP ASP A . n
A 1 132 THR 132 132 132 THR THR A . n
A 1 133 VAL 133 133 133 VAL VAL A . n
A 1 134 ALA 134 134 134 ALA ALA A . n
A 1 135 ASP 135 135 135 ASP ASP A . n
A 1 136 ALA 136 136 136 ALA ALA A . n
A 1 137 LYS 137 137 137 LYS LYS A . n
A 1 138 ASP 138 138 138 ASP ASP A . n
A 1 139 GLY 139 139 139 GLY GLY A . n
A 1 140 LYS 140 140 140 LYS LYS A . n
A 1 141 GLU 141 141 141 GLU GLU A . n
A 1 142 ILE 142 142 142 ILE ILE A . n
A 1 143 ASP 143 143 143 ASP ASP A . n
A 1 144 THR 144 144 144 THR THR A . n
A 1 145 LYS 145 145 145 LYS LYS A . n
A 1 146 HIS 146 146 146 HIS HIS A . n
A 1 147 LEU 147 147 147 LEU LEU A . n
A 1 148 PRO 148 148 148 PRO PRO A . n
A 1 149 SER 149 149 149 SER SER A . n
A 1 150 THR 150 150 150 THR THR A . n
A 1 151 CYS 151 151 151 CYS CYS A . n
A 1 152 ARG 152 152 152 ARG ARG A . n
A 1 153 ASP 153 153 153 ASP ASP A . n
A 1 154 ASN 154 154 154 ASN ASN A . n
A 1 155 PHE 155 155 155 PHE PHE A . n
A 1 156 ASP 156 156 156 ASP ASP A . n
A 1 157 ALA 157 157 157 ALA ALA A . n
A 1 158 LYS 158 158 158 LYS LYS A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NAG 1 B NAG 1 ? NAG 161 n
B 2 GLA 2 B GLA 2 ? GAL 160 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PT 1 200 200 PT PT A .
D 4 HTO 1 162 162 HTO HTO A .
E 5 HOH 1 301 301 HOH HOH A .
E 5 HOH 2 303 303 HOH HOH A .
E 5 HOH 3 307 307 HOH HOH A .
E 5 HOH 4 308 308 HOH HOH A .
E 5 HOH 5 310 310 HOH HOH A .
E 5 HOH 6 311 311 HOH HOH A .
E 5 HOH 7 314 314 HOH HOH A .
E 5 HOH 8 315 315 HOH HOH A .
E 5 HOH 9 317 317 HOH HOH A .
E 5 HOH 10 322 322 HOH HOH A .
E 5 HOH 11 323 323 HOH HOH A .
E 5 HOH 12 324 324 HOH HOH A .
E 5 HOH 13 325 325 HOH HOH A .
E 5 HOH 14 326 326 HOH HOH A .
E 5 HOH 15 328 328 HOH HOH A .
E 5 HOH 16 333 333 HOH HOH A .
E 5 HOH 17 334 334 HOH HOH A .
E 5 HOH 18 335 335 HOH HOH A .
E 5 HOH 19 336 336 HOH HOH A .
E 5 HOH 20 338 338 HOH HOH A .
E 5 HOH 21 340 340 HOH HOH A .
E 5 HOH 22 341 341 HOH HOH A .
E 5 HOH 23 343 343 HOH HOH A .
E 5 HOH 24 344 344 HOH HOH A .
E 5 HOH 25 345 345 HOH HOH A .
E 5 HOH 26 346 346 HOH HOH A .
E 5 HOH 27 347 347 HOH HOH A .
E 5 HOH 28 348 348 HOH HOH A .
E 5 HOH 29 352 352 HOH HOH A .
E 5 HOH 30 353 353 HOH HOH A .
E 5 HOH 31 354 354 HOH HOH A .
E 5 HOH 32 355 355 HOH HOH A .
E 5 HOH 33 356 356 HOH HOH A .
E 5 HOH 34 357 357 HOH HOH A .
E 5 HOH 35 358 358 HOH HOH A .
E 5 HOH 36 359 359 HOH HOH A .
E 5 HOH 37 361 361 HOH HOH A .
E 5 HOH 38 362 362 HOH HOH A .
E 5 HOH 39 364 364 HOH HOH A .
E 5 HOH 40 365 365 HOH HOH A .
E 5 HOH 41 366 366 HOH HOH A .
E 5 HOH 42 367 367 HOH HOH A .
E 5 HOH 43 371 371 HOH HOH A .
E 5 HOH 44 372 372 HOH HOH A .
E 5 HOH 45 375 375 HOH HOH A .
E 5 HOH 46 376 376 HOH HOH A .
E 5 HOH 47 377 377 HOH HOH A .
E 5 HOH 48 378 378 HOH HOH A .
E 5 HOH 49 381 381 HOH HOH A .
E 5 HOH 50 382 382 HOH HOH A .
E 5 HOH 51 383 383 HOH HOH A .
E 5 HOH 52 384 384 HOH HOH A .
E 5 HOH 53 386 386 HOH HOH A .
E 5 HOH 54 387 387 HOH HOH A .
E 5 HOH 55 388 388 HOH HOH A .
E 5 HOH 56 389 389 HOH HOH A .
E 5 HOH 57 390 390 HOH HOH A .
E 5 HOH 58 391 391 HOH HOH A .
E 5 HOH 59 394 394 HOH HOH A .
E 5 HOH 60 395 395 HOH HOH A .
E 5 HOH 61 396 396 HOH HOH A .
E 5 HOH 62 397 397 HOH HOH A .
E 5 HOH 63 398 398 HOH HOH A .
E 5 HOH 64 399 399 HOH HOH A .
E 5 HOH 65 401 401 HOH HOH A .
E 5 HOH 66 403 403 HOH HOH A .
E 5 HOH 67 404 404 HOH HOH A .
E 5 HOH 68 405 405 HOH HOH A .
E 5 HOH 69 406 406 HOH HOH A .
E 5 HOH 70 407 407 HOH HOH A .
E 5 HOH 71 408 408 HOH HOH A .
E 5 HOH 72 409 409 HOH HOH A .
E 5 HOH 73 415 415 HOH HOH A .
E 5 HOH 74 416 416 HOH HOH A .
E 5 HOH 75 420 420 HOH HOH A .
E 5 HOH 76 425 425 HOH HOH A .
E 5 HOH 77 426 426 HOH HOH A .
E 5 HOH 78 427 427 HOH HOH A .
E 5 HOH 79 430 430 HOH HOH A .
E 5 HOH 80 431 431 HOH HOH A .
E 5 HOH 81 432 432 HOH HOH A .
E 5 HOH 82 433 433 HOH HOH A .
E 5 HOH 83 436 436 HOH HOH A .
E 5 HOH 84 437 437 HOH HOH A .
E 5 HOH 85 438 438 HOH HOH A .
E 5 HOH 86 440 440 HOH HOH A .
E 5 HOH 87 503 503 HOH HOH A .
E 5 HOH 88 508 508 HOH HOH A .
E 5 HOH 89 509 509 HOH HOH A .
E 5 HOH 90 510 510 HOH HOH A .
E 5 HOH 91 513 513 HOH HOH A .
E 5 HOH 92 514 514 HOH HOH A .
E 5 HOH 93 515 515 HOH HOH A .
E 5 HOH 94 517 517 HOH HOH A .
E 5 HOH 95 518 518 HOH HOH A .
E 5 HOH 96 522 522 HOH HOH A .
E 5 HOH 97 602 602 HOH HOH A .
E 5 HOH 98 603 603 HOH HOH A .
E 5 HOH 99 604 604 HOH HOH A .
E 5 HOH 100 605 605 HOH HOH A .
E 5 HOH 101 606 606 HOH HOH A .
E 5 HOH 102 608 608 HOH HOH A .
E 5 HOH 103 609 609 HOH HOH A .
E 5 HOH 104 610 610 HOH HOH A .
E 5 HOH 105 701 701 HOH HOH A .
E 5 HOH 106 702 702 HOH HOH A .
E 5 HOH 107 801 801 HOH HOH A .
E 5 HOH 108 802 802 HOH HOH A .
E 5 HOH 109 803 803 HOH HOH A .
E 5 HOH 110 804 804 HOH HOH A .
E 5 HOH 111 805 805 HOH HOH A .
E 5 HOH 112 806 806 HOH HOH A .
E 5 HOH 113 807 807 HOH HOH A .
E 5 HOH 114 808 808 HOH HOH A .
E 5 HOH 115 809 809 HOH HOH A .
E 5 HOH 116 810 810 HOH HOH A .
E 5 HOH 117 811 811 HOH HOH A .
E 5 HOH 118 812 812 HOH HOH A .
E 5 HOH 119 813 813 HOH HOH A .
E 5 HOH 120 814 814 HOH HOH A .
E 5 HOH 121 815 815 HOH HOH A .
E 5 HOH 122 816 816 HOH HOH A .
E 5 HOH 123 817 817 HOH HOH A .
E 5 HOH 124 818 818 HOH HOH A .
E 5 HOH 125 819 819 HOH HOH A .
E 5 HOH 126 820 820 HOH HOH A .
E 5 HOH 127 821 821 HOH HOH A .
E 5 HOH 128 822 822 HOH HOH A .
E 5 HOH 129 823 823 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
MOSFLM 'data reduction' . ? 1
ROTAVATA 'data reduction' . ? 2
Agrovata 'data reduction' . ? 3
X-PLOR 'model building' 3.1 ? 4
X-PLOR refinement 3.1 ? 5
CCP4 'data scaling' '(AGROVATA' ? 6
ROTAVATA 'data scaling' . ? 7
X-PLOR phasing 3.1 ? 8
#
_cell.entry_id 1AY2
_cell.length_a 127.580
_cell.length_b 121.080
_cell.length_c 26.860
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 1AY2
_symmetry.space_group_name_H-M 'C 2 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 21
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 1AY2
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.16
_exptl_crystal.density_percent_sol 60.
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 8.0
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details
'PROTEIN WAS CRYSTALLIZED FROM 60% PEG400, 50 MM CHESS, PH 8.0, 1% BETA-OCTYL GLUCOSIDE, 0.6% 1,2,3-HEPTANETRIOL.'
#
_diffrn.id 1
_diffrn.ambient_temp 290
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type MARRESEARCH
_diffrn_detector.pdbx_collection_date 1993-05
_diffrn_detector.details 'BENT MIRROR'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'SI(111)'
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.07
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'SSRL BEAMLINE BL7-1'
_diffrn_source.pdbx_synchrotron_site SSRL
_diffrn_source.pdbx_synchrotron_beamline BL7-1
_diffrn_source.pdbx_wavelength 1.07
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1AY2
_reflns.observed_criterion_sigma_I 2.0
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 24.0
_reflns.d_resolution_high 2.6
_reflns.number_obs 6494
_reflns.number_all ?
_reflns.percent_possible_obs 95.
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value 0.081
_reflns.pdbx_netI_over_sigmaI 6.7
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 4.0
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 2.6
_reflns_shell.d_res_low 2.78
_reflns_shell.percent_possible_all 80.2
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value 0.307
_reflns_shell.meanI_over_sigI_obs 2.3
_reflns_shell.pdbx_redundancy 4.2
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 1AY2
_refine.ls_number_reflns_obs 6565
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 2.0
_refine.pdbx_data_cutoff_high_absF 100000.0
_refine.pdbx_data_cutoff_low_absF 0.1
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 10.0
_refine.ls_d_res_high 2.6
_refine.ls_percent_reflns_obs 95.0
_refine.ls_R_factor_obs 0.194
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.194
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean 30.
_refine.aniso_B[1][1] -4.25
_refine.aniso_B[2][2] 8.25
_refine.aniso_B[3][3] -4.00
_refine.aniso_B[1][2] 0.0
_refine.aniso_B[1][3] 0.0
_refine.aniso_B[2][3] 0.0
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details
;SOLVENT FLATTENING (WITH 50%) SOLVENT) USING PHASES WAS USED TO IMPROVE PHASES (F.O.M. INCREASED FROM 0.75 - 0.86) FOR FITTING. DATA FROM A PT-SOAKED DERIVATIVE CRYSTAL WAS USED FOR REFINEMENT BECAUSE IT WAS STRONGER THAN "NATIVE" DATA.
THE EXPECTED N-TERMINAL METHYL-PHE WAS VERIFIED BY
N-TERMINAL SEQUENCING BUT WAS NOT INCLUDED IN THE MODEL
BECAUSE IT WAS NOT APPARENT IN ELECTRON DENSITY.
WATERS WERE NOT RESTRAINED DURING REFINEMENT AND TWO WATERS
(333 AND 348) MOVED CLOSE TO THE PT SITE.
;
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct MIR
_refine.pdbx_isotropic_thermal_model RESTRAINED
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_overall_phase_error ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 1AY2
_refine_analyze.Luzzati_coordinate_error_obs ?
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs 10.0
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1208
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 36
_refine_hist.number_atoms_solvent 129
_refine_hist.number_atoms_total 1373
_refine_hist.d_res_high 2.6
_refine_hist.d_res_low 10.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 3.5 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d 1.359 ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? 1.5 ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? 2.0 ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? 2.0 ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? 2.5 ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 8
_refine_ls_shell.d_res_high 2.60
_refine_ls_shell.d_res_low 2.72
_refine_ls_shell.number_reflns_R_work 723
_refine_ls_shell.R_factor_R_work 0.324
_refine_ls_shell.percent_reflns_obs ?
_refine_ls_shell.R_factor_R_free ?
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 PARAM19X.PRO TOPH19X.PRO 'X-RAY DIFFRACTION'
2 PARAM_AUX.PRO TOPH3.CHO 'X-RAY DIFFRACTION'
3 PARAM3_MOD.CHO HEPT123.TOP 'X-RAY DIFFRACTION'
4 ? TOPH19.PEP 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 1AY2
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1AY2
_struct.title 'STRUCTURE OF THE FIBER-FORMING PROTEIN PILIN AT 2.6 ANGSTROMS RESOLUTION'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1AY2
_struct_keywords.pdbx_keywords 'CELL ADHESION'
_struct_keywords.text
'TYPE IV PILIN, FIBER-FORMING PROTEIN, MEMBRANE PROTEIN, DNA INDING PROTEIN, CONTRACTILE PROTEIN, CELL ADHESION'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code FMM1_NEIGO
_struct_ref.entity_id 1
_struct_ref.pdbx_db_accession P02974
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_seq_one_letter_code
;MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPPSDI
KGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRD
NFDAK
;
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1AY2
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 158
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P02974
_struct_ref_seq.db_align_beg 8
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 165
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 158
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 THR A 2 ? HIS A 54 ? THR A 2 HIS A 54 1 ? 53
HELX_P HELX_P2 2 ASN A 60 ? ALA A 64 ? ASN A 60 ALA A 64 1 ? 5
HELX_P HELX_P3 3 PRO A 69 ? ASP A 72 ? PRO A 69 ASP A 72 5 ? 4
HELX_P HELX_P4 4 ASN A 99 ? LYS A 102 ? ASN A 99 LYS A 102 5 ? 4
HELX_P HELX_P5 5 THR A 144 ? HIS A 146 ? THR A 144 HIS A 146 5 ? 3
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 121 SG ? ? ? 1_555 A CYS 151 SG ? ? A CYS 121 A CYS 151 1_555 ? ? ? ? ? ? ? 2.010 ? ?
covale1 covale both ? A PHE 1 C ? ? ? 1_555 A THR 2 N ? ? A PHE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.396 ? ?
covale2 covale one ? A SER 63 OG ? ? ? 1_555 B NAG . C1 ? ? A SER 63 B NAG 1 1_555 ? ? ? ? ? ? ? 1.397 ? O-Glycosylation
covale3 covale both ? B NAG . O3 ? ? ? 1_555 B GLA . C1 ? ? B NAG 1 B GLA 2 1_555 ? ? ? ? ? ? ? 1.396 ? ?
metalc1 metalc ? ? A HIS 54 NE2 ? ? ? 1_555 C PT . PT ? ? A HIS 54 A PT 200 1_555 ? ? ? ? ? ? ? 3.381 ? ?
metalc2 metalc ? ? A HIS 54 NE2 ? ? ? 4_566 C PT . PT ? ? A HIS 54 A PT 200 1_555 ? ? ? ? ? ? ? 3.383 ? ?
metalc3 metalc ? ? C PT . PT ? ? ? 1_555 E HOH . O ? ? A PT 200 A HOH 333 1_555 ? ? ? ? ? ? ? 1.651 ? ?
metalc4 metalc ? ? C PT . PT ? ? ? 1_555 E HOH . O ? ? A PT 200 A HOH 333 4_566 ? ? ? ? ? ? ? 1.651 ? ?
metalc5 metalc ? ? C PT . PT ? ? ? 1_555 E HOH . O ? ? A PT 200 A HOH 348 1_555 ? ? ? ? ? ? ? 1.630 ? ?
metalc6 metalc ? ? C PT . PT ? ? ? 1_555 E HOH . O ? ? A PT 200 A HOH 348 4_566 ? ? ? ? ? ? ? 1.628 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
metalc ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 NE2 ? A HIS 54 ? A HIS 54 ? 4_566 97.4 ?
2 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 333 ? 1_555 73.6 ?
3 NE2 ? A HIS 54 ? A HIS 54 ? 4_566 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 333 ? 1_555 60.2 ?
4 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 333 ? 4_566 60.2 ?
5 NE2 ? A HIS 54 ? A HIS 54 ? 4_566 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 333 ? 4_566 73.6 ?
6 O ? E HOH . ? A HOH 333 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 333 ? 4_566 107.6 ?
7 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 1_555 173.0 ?
8 NE2 ? A HIS 54 ? A HIS 54 ? 4_566 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 1_555 79.2 ?
9 O ? E HOH . ? A HOH 333 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 1_555 109.3 ?
10 O ? E HOH . ? A HOH 333 ? 4_566 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 1_555 112.9 ?
11 NE2 ? A HIS 54 ? A HIS 54 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 4_566 79.2 ?
12 NE2 ? A HIS 54 ? A HIS 54 ? 4_566 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 4_566 173.1 ?
13 O ? E HOH . ? A HOH 333 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 4_566 113.0 ?
14 O ? E HOH . ? A HOH 333 ? 4_566 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 4_566 109.4 ?
15 O ? E HOH . ? A HOH 348 ? 1_555 PT ? C PT . ? A PT 200 ? 1_555 O ? E HOH . ? A HOH 348 ? 4_566 104.9 ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 NAG B . ? SER A 63 ? NAG B 1 ? 1_555 SER A 63 ? 1_555 C1 OG SER 5 NAG O-Glycosylation Carbohydrate
2 CYS A 121 ? CYS A 151 ? CYS A 121 ? 1_555 CYS A 151 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 4 ?
B ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
B 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 SER A 116 ? GLN A 123 ? SER A 116 GLN A 123
A 2 LYS A 105 ? GLU A 113 ? LYS A 105 GLU A 113
A 3 VAL A 87 ? MET A 92 ? VAL A 87 MET A 92
A 4 VAL A 78 ? LYS A 84 ? VAL A 78 LYS A 84
B 1 VAL A 125 ? ASP A 129 ? VAL A 125 ASP A 129
B 2 THR A 132 ? ASP A 135 ? THR A 132 ASP A 135
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 O SER A 116 ? O SER A 116 N GLU A 113 ? N GLU A 113
A 2 3 O LEU A 106 ? O LEU A 106 N ALA A 90 ? N ALA A 90
A 3 4 O VAL A 87 ? O VAL A 87 N LYS A 84 ? N LYS A 84
B 1 2 O THR A 126 ? O THR A 126 N ALA A 134 ? N ALA A 134
#
_pdbx_entry_details.entry_id 1AY2
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
_pdbx_validate_rmsd_bond.id 1
_pdbx_validate_rmsd_bond.PDB_model_num 1
_pdbx_validate_rmsd_bond.auth_atom_id_1 NE2
_pdbx_validate_rmsd_bond.auth_asym_id_1 A
_pdbx_validate_rmsd_bond.auth_comp_id_1 HIS
_pdbx_validate_rmsd_bond.auth_seq_id_1 146
_pdbx_validate_rmsd_bond.PDB_ins_code_1 ?
_pdbx_validate_rmsd_bond.label_alt_id_1 ?
_pdbx_validate_rmsd_bond.auth_atom_id_2 CD2
_pdbx_validate_rmsd_bond.auth_asym_id_2 A
_pdbx_validate_rmsd_bond.auth_comp_id_2 HIS
_pdbx_validate_rmsd_bond.auth_seq_id_2 146
_pdbx_validate_rmsd_bond.PDB_ins_code_2 ?
_pdbx_validate_rmsd_bond.label_alt_id_2 ?
_pdbx_validate_rmsd_bond.bond_value 1.294
_pdbx_validate_rmsd_bond.bond_target_value 1.373
_pdbx_validate_rmsd_bond.bond_deviation -0.079
_pdbx_validate_rmsd_bond.bond_standard_deviation 0.011
_pdbx_validate_rmsd_bond.linker_flag N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 N A PHE 1 ? ? CA A PHE 1 ? ? CB A PHE 1 ? ? 98.94 110.60 -11.66 1.80 N
2 1 N A THR 2 ? ? CA A THR 2 ? ? C A THR 2 ? ? 135.13 111.00 24.13 2.70 N
3 1 CA A VAL 19 ? ? CB A VAL 19 ? ? CG2 A VAL 19 ? ? 100.67 110.90 -10.23 1.50 N
4 1 CB A TYR 27 ? ? CG A TYR 27 ? ? CD1 A TYR 27 ? ? 116.73 121.00 -4.27 0.60 N
5 1 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH2 A ARG 30 ? ? 116.95 120.30 -3.35 0.50 N
6 1 CD1 A TRP 57 ? ? CG A TRP 57 ? ? CD2 A TRP 57 ? ? 112.63 106.30 6.33 0.80 N
7 1 CB A TRP 57 ? ? CG A TRP 57 ? ? CD1 A TRP 57 ? ? 118.75 127.00 -8.25 1.30 N
8 1 CE2 A TRP 57 ? ? CD2 A TRP 57 ? ? CG A TRP 57 ? ? 101.29 107.30 -6.01 0.80 N
9 1 CG A TRP 57 ? ? CD2 A TRP 57 ? ? CE3 A TRP 57 ? ? 140.24 133.90 6.34 0.90 N
10 1 CA A SER 68 ? ? CB A SER 68 ? ? OG A SER 68 ? ? 128.15 111.20 16.95 2.70 N
11 1 CB A TYR 77 ? ? CG A TYR 77 ? ? CD2 A TYR 77 ? ? 115.90 121.00 -5.10 0.60 N
12 1 CA A LEU 106 ? ? CB A LEU 106 ? ? CG A LEU 106 ? ? 136.82 115.30 21.52 2.30 N
13 1 CD1 A TRP 109 ? ? CG A TRP 109 ? ? CD2 A TRP 109 ? ? 112.82 106.30 6.52 0.80 N
14 1 CE2 A TRP 109 ? ? CD2 A TRP 109 ? ? CG A TRP 109 ? ? 101.55 107.30 -5.75 0.80 N
15 1 CD1 A TRP 119 ? ? CG A TRP 119 ? ? CD2 A TRP 119 ? ? 112.80 106.30 6.50 0.80 N
16 1 CE2 A TRP 119 ? ? CD2 A TRP 119 ? ? CG A TRP 119 ? ? 101.31 107.30 -5.99 0.80 N
17 1 CG A TRP 119 ? ? CD2 A TRP 119 ? ? CE3 A TRP 119 ? ? 140.02 133.90 6.12 0.90 N
18 1 N A VAL 125 ? ? CA A VAL 125 ? ? CB A VAL 125 ? ? 98.12 111.50 -13.38 2.20 N
19 1 NE A ARG 152 ? ? CZ A ARG 152 ? ? NH1 A ARG 152 ? ? 123.41 120.30 3.11 0.50 N
20 1 NE A ARG 152 ? ? CZ A ARG 152 ? ? NH2 A ARG 152 ? ? 116.37 120.30 -3.93 0.50 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 HIS A 54 ? ? -147.14 -29.57
2 1 GLU A 113 ? ? -109.63 77.08
3 1 ASN A 114 ? ? -4.61 106.11
4 1 ALA A 136 ? ? -118.03 62.29
#
_pdbx_validate_planes.id 1
_pdbx_validate_planes.PDB_model_num 1
_pdbx_validate_planes.auth_comp_id TYR
_pdbx_validate_planes.auth_asym_id A
_pdbx_validate_planes.auth_seq_id 50
_pdbx_validate_planes.PDB_ins_code ?
_pdbx_validate_planes.label_alt_id ?
_pdbx_validate_planes.rmsd 0.096
_pdbx_validate_planes.type 'SIDE CHAIN'
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A SER 63 A SER 63 ? SER 'GLYCOSYLATION SITE'
2 A PHE 1 A PHE 1 ? PHE 'METHYL L-PHENYLALANINATE'
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id PT
_pdbx_struct_special_symmetry.auth_seq_id 200
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id C
_pdbx_struct_special_symmetry.label_comp_id PT
_pdbx_struct_special_symmetry.label_seq_id .
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLA C1 C N S 88
GLA C2 C N R 89
GLA C3 C N S 90
GLA C4 C N R 91
GLA C5 C N R 92
GLA C6 C N N 93
GLA O1 O N N 94
GLA O2 O N N 95
GLA O3 O N N 96
GLA O4 O N N 97
GLA O5 O N N 98
GLA O6 O N N 99
GLA H1 H N N 100
GLA H2 H N N 101
GLA H3 H N N 102
GLA H4 H N N 103
GLA H5 H N N 104
GLA H61 H N N 105
GLA H62 H N N 106
GLA HO1 H N N 107
GLA HO2 H N N 108
GLA HO3 H N N 109
GLA HO4 H N N 110
GLA HO6 H N N 111
GLN N N N N 112
GLN CA C N S 113
GLN C C N N 114
GLN O O N N 115
GLN CB C N N 116
GLN CG C N N 117
GLN CD C N N 118
GLN OE1 O N N 119
GLN NE2 N N N 120
GLN OXT O N N 121
GLN H H N N 122
GLN H2 H N N 123
GLN HA H N N 124
GLN HB2 H N N 125
GLN HB3 H N N 126
GLN HG2 H N N 127
GLN HG3 H N N 128
GLN HE21 H N N 129
GLN HE22 H N N 130
GLN HXT H N N 131
GLU N N N N 132
GLU CA C N S 133
GLU C C N N 134
GLU O O N N 135
GLU CB C N N 136
GLU CG C N N 137
GLU CD C N N 138
GLU OE1 O N N 139
GLU OE2 O N N 140
GLU OXT O N N 141
GLU H H N N 142
GLU H2 H N N 143
GLU HA H N N 144
GLU HB2 H N N 145
GLU HB3 H N N 146
GLU HG2 H N N 147
GLU HG3 H N N 148
GLU HE2 H N N 149
GLU HXT H N N 150
GLY N N N N 151
GLY CA C N N 152
GLY C C N N 153
GLY O O N N 154
GLY OXT O N N 155
GLY H H N N 156
GLY H2 H N N 157
GLY HA2 H N N 158
GLY HA3 H N N 159
GLY HXT H N N 160
HIS N N N N 161
HIS CA C N S 162
HIS C C N N 163
HIS O O N N 164
HIS CB C N N 165
HIS CG C Y N 166
HIS ND1 N Y N 167
HIS CD2 C Y N 168
HIS CE1 C Y N 169
HIS NE2 N Y N 170
HIS OXT O N N 171
HIS H H N N 172
HIS H2 H N N 173
HIS HA H N N 174
HIS HB2 H N N 175
HIS HB3 H N N 176
HIS HD1 H N N 177
HIS HD2 H N N 178
HIS HE1 H N N 179
HIS HE2 H N N 180
HIS HXT H N N 181
HOH O O N N 182
HOH H1 H N N 183
HOH H2 H N N 184
HTO C1 C N N 185
HTO O1 O N N 186
HTO C2 C N R 187
HTO O2 O N N 188
HTO C3 C N R 189
HTO O3 O N N 190
HTO C4 C N N 191
HTO C5 C N N 192
HTO C6 C N N 193
HTO C7 C N N 194
HTO H11 H N N 195
HTO H12 H N N 196
HTO HO1 H N N 197
HTO H2 H N N 198
HTO HO2 H N N 199
HTO H3 H N N 200
HTO HO3 H N N 201
HTO H41 H N N 202
HTO H42 H N N 203
HTO H51 H N N 204
HTO H52 H N N 205
HTO H61 H N N 206
HTO H62 H N N 207
HTO H71 H N N 208
HTO H72 H N N 209
HTO H73 H N N 210
ILE N N N N 211
ILE CA C N S 212
ILE C C N N 213
ILE O O N N 214
ILE CB C N S 215
ILE CG1 C N N 216
ILE CG2 C N N 217
ILE CD1 C N N 218
ILE OXT O N N 219
ILE H H N N 220
ILE H2 H N N 221
ILE HA H N N 222
ILE HB H N N 223
ILE HG12 H N N 224
ILE HG13 H N N 225
ILE HG21 H N N 226
ILE HG22 H N N 227
ILE HG23 H N N 228
ILE HD11 H N N 229
ILE HD12 H N N 230
ILE HD13 H N N 231
ILE HXT H N N 232
LEU N N N N 233
LEU CA C N S 234
LEU C C N N 235
LEU O O N N 236
LEU CB C N N 237
LEU CG C N N 238
LEU CD1 C N N 239
LEU CD2 C N N 240
LEU OXT O N N 241
LEU H H N N 242
LEU H2 H N N 243
LEU HA H N N 244
LEU HB2 H N N 245
LEU HB3 H N N 246
LEU HG H N N 247
LEU HD11 H N N 248
LEU HD12 H N N 249
LEU HD13 H N N 250
LEU HD21 H N N 251
LEU HD22 H N N 252
LEU HD23 H N N 253
LEU HXT H N N 254
LYS N N N N 255
LYS CA C N S 256
LYS C C N N 257
LYS O O N N 258
LYS CB C N N 259
LYS CG C N N 260
LYS CD C N N 261
LYS CE C N N 262
LYS NZ N N N 263
LYS OXT O N N 264
LYS H H N N 265
LYS H2 H N N 266
LYS HA H N N 267
LYS HB2 H N N 268
LYS HB3 H N N 269
LYS HG2 H N N 270
LYS HG3 H N N 271
LYS HD2 H N N 272
LYS HD3 H N N 273
LYS HE2 H N N 274
LYS HE3 H N N 275
LYS HZ1 H N N 276
LYS HZ2 H N N 277
LYS HZ3 H N N 278
LYS HXT H N N 279
MET N N N N 280
MET CA C N S 281
MET C C N N 282
MET O O N N 283
MET CB C N N 284
MET CG C N N 285
MET SD S N N 286
MET CE C N N 287
MET OXT O N N 288
MET H H N N 289
MET H2 H N N 290
MET HA H N N 291
MET HB2 H N N 292
MET HB3 H N N 293
MET HG2 H N N 294
MET HG3 H N N 295
MET HE1 H N N 296
MET HE2 H N N 297
MET HE3 H N N 298
MET HXT H N N 299
NAG C1 C N R 300
NAG C2 C N R 301
NAG C3 C N R 302
NAG C4 C N S 303
NAG C5 C N R 304
NAG C6 C N N 305
NAG C7 C N N 306
NAG C8 C N N 307
NAG N2 N N N 308
NAG O1 O N N 309
NAG O3 O N N 310
NAG O4 O N N 311
NAG O5 O N N 312
NAG O6 O N N 313
NAG O7 O N N 314
NAG H1 H N N 315
NAG H2 H N N 316
NAG H3 H N N 317
NAG H4 H N N 318
NAG H5 H N N 319
NAG H61 H N N 320
NAG H62 H N N 321
NAG H81 H N N 322
NAG H82 H N N 323
NAG H83 H N N 324
NAG HN2 H N N 325
NAG HO1 H N N 326
NAG HO3 H N N 327
NAG HO4 H N N 328
NAG HO6 H N N 329
PHE N N N N 330
PHE CA C N S 331
PHE C C N N 332
PHE O O N N 333
PHE CB C N N 334
PHE CG C Y N 335
PHE CD1 C Y N 336
PHE CD2 C Y N 337
PHE CE1 C Y N 338
PHE CE2 C Y N 339
PHE CZ C Y N 340
PHE OXT O N N 341
PHE H H N N 342
PHE H2 H N N 343
PHE HA H N N 344
PHE HB2 H N N 345
PHE HB3 H N N 346
PHE HD1 H N N 347
PHE HD2 H N N 348
PHE HE1 H N N 349
PHE HE2 H N N 350
PHE HZ H N N 351
PHE HXT H N N 352
PRO N N N N 353
PRO CA C N S 354
PRO C C N N 355
PRO O O N N 356
PRO CB C N N 357
PRO CG C N N 358
PRO CD C N N 359
PRO OXT O N N 360
PRO H H N N 361
PRO HA H N N 362
PRO HB2 H N N 363
PRO HB3 H N N 364
PRO HG2 H N N 365
PRO HG3 H N N 366
PRO HD2 H N N 367
PRO HD3 H N N 368
PRO HXT H N N 369
PT PT PT N N 370
SER N N N N 371
SER CA C N S 372
SER C C N N 373
SER O O N N 374
SER CB C N N 375
SER OG O N N 376
SER OXT O N N 377
SER H H N N 378
SER H2 H N N 379
SER HA H N N 380
SER HB2 H N N 381
SER HB3 H N N 382
SER HG H N N 383
SER HXT H N N 384
THR N N N N 385
THR CA C N S 386
THR C C N N 387
THR O O N N 388
THR CB C N R 389
THR OG1 O N N 390
THR CG2 C N N 391
THR OXT O N N 392
THR H H N N 393
THR H2 H N N 394
THR HA H N N 395
THR HB H N N 396
THR HG1 H N N 397
THR HG21 H N N 398
THR HG22 H N N 399
THR HG23 H N N 400
THR HXT H N N 401
TRP N N N N 402
TRP CA C N S 403
TRP C C N N 404
TRP O O N N 405
TRP CB C N N 406
TRP CG C Y N 407
TRP CD1 C Y N 408
TRP CD2 C Y N 409
TRP NE1 N Y N 410
TRP CE2 C Y N 411
TRP CE3 C Y N 412
TRP CZ2 C Y N 413
TRP CZ3 C Y N 414
TRP CH2 C Y N 415
TRP OXT O N N 416
TRP H H N N 417
TRP H2 H N N 418
TRP HA H N N 419
TRP HB2 H N N 420
TRP HB3 H N N 421
TRP HD1 H N N 422
TRP HE1 H N N 423
TRP HE3 H N N 424
TRP HZ2 H N N 425
TRP HZ3 H N N 426
TRP HH2 H N N 427
TRP HXT H N N 428
TYR N N N N 429
TYR CA C N S 430
TYR C C N N 431
TYR O O N N 432
TYR CB C N N 433
TYR CG C Y N 434
TYR CD1 C Y N 435
TYR CD2 C Y N 436
TYR CE1 C Y N 437
TYR CE2 C Y N 438
TYR CZ C Y N 439
TYR OH O N N 440
TYR OXT O N N 441
TYR H H N N 442
TYR H2 H N N 443
TYR HA H N N 444
TYR HB2 H N N 445
TYR HB3 H N N 446
TYR HD1 H N N 447
TYR HD2 H N N 448
TYR HE1 H N N 449
TYR HE2 H N N 450
TYR HH H N N 451
TYR HXT H N N 452
VAL N N N N 453
VAL CA C N S 454
VAL C C N N 455
VAL O O N N 456
VAL CB C N N 457
VAL CG1 C N N 458
VAL CG2 C N N 459
VAL OXT O N N 460
VAL H H N N 461
VAL H2 H N N 462
VAL HA H N N 463
VAL HB H N N 464
VAL HG11 H N N 465
VAL HG12 H N N 466
VAL HG13 H N N 467
VAL HG21 H N N 468
VAL HG22 H N N 469
VAL HG23 H N N 470
VAL HXT H N N 471
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLA C1 C2 sing N N 83
GLA C1 O1 sing N N 84
GLA C1 O5 sing N N 85
GLA C1 H1 sing N N 86
GLA C2 C3 sing N N 87
GLA C2 O2 sing N N 88
GLA C2 H2 sing N N 89
GLA C3 C4 sing N N 90
GLA C3 O3 sing N N 91
GLA C3 H3 sing N N 92
GLA C4 C5 sing N N 93
GLA C4 O4 sing N N 94
GLA C4 H4 sing N N 95
GLA C5 C6 sing N N 96
GLA C5 O5 sing N N 97
GLA C5 H5 sing N N 98
GLA C6 O6 sing N N 99
GLA C6 H61 sing N N 100
GLA C6 H62 sing N N 101
GLA O1 HO1 sing N N 102
GLA O2 HO2 sing N N 103
GLA O3 HO3 sing N N 104
GLA O4 HO4 sing N N 105
GLA O6 HO6 sing N N 106
GLN N CA sing N N 107
GLN N H sing N N 108
GLN N H2 sing N N 109
GLN CA C sing N N 110
GLN CA CB sing N N 111
GLN CA HA sing N N 112
GLN C O doub N N 113
GLN C OXT sing N N 114
GLN CB CG sing N N 115
GLN CB HB2 sing N N 116
GLN CB HB3 sing N N 117
GLN CG CD sing N N 118
GLN CG HG2 sing N N 119
GLN CG HG3 sing N N 120
GLN CD OE1 doub N N 121
GLN CD NE2 sing N N 122
GLN NE2 HE21 sing N N 123
GLN NE2 HE22 sing N N 124
GLN OXT HXT sing N N 125
GLU N CA sing N N 126
GLU N H sing N N 127
GLU N H2 sing N N 128
GLU CA C sing N N 129
GLU CA CB sing N N 130
GLU CA HA sing N N 131
GLU C O doub N N 132
GLU C OXT sing N N 133
GLU CB CG sing N N 134
GLU CB HB2 sing N N 135
GLU CB HB3 sing N N 136
GLU CG CD sing N N 137
GLU CG HG2 sing N N 138
GLU CG HG3 sing N N 139
GLU CD OE1 doub N N 140
GLU CD OE2 sing N N 141
GLU OE2 HE2 sing N N 142
GLU OXT HXT sing N N 143
GLY N CA sing N N 144
GLY N H sing N N 145
GLY N H2 sing N N 146
GLY CA C sing N N 147
GLY CA HA2 sing N N 148
GLY CA HA3 sing N N 149
GLY C O doub N N 150
GLY C OXT sing N N 151
GLY OXT HXT sing N N 152
HIS N CA sing N N 153
HIS N H sing N N 154
HIS N H2 sing N N 155
HIS CA C sing N N 156
HIS CA CB sing N N 157
HIS CA HA sing N N 158
HIS C O doub N N 159
HIS C OXT sing N N 160
HIS CB CG sing N N 161
HIS CB HB2 sing N N 162
HIS CB HB3 sing N N 163
HIS CG ND1 sing Y N 164
HIS CG CD2 doub Y N 165
HIS ND1 CE1 doub Y N 166
HIS ND1 HD1 sing N N 167
HIS CD2 NE2 sing Y N 168
HIS CD2 HD2 sing N N 169
HIS CE1 NE2 sing Y N 170
HIS CE1 HE1 sing N N 171
HIS NE2 HE2 sing N N 172
HIS OXT HXT sing N N 173
HOH O H1 sing N N 174
HOH O H2 sing N N 175
HTO C1 O1 sing N N 176
HTO C1 C2 sing N N 177
HTO C1 H11 sing N N 178
HTO C1 H12 sing N N 179
HTO O1 HO1 sing N N 180
HTO C2 O2 sing N N 181
HTO C2 C3 sing N N 182
HTO C2 H2 sing N N 183
HTO O2 HO2 sing N N 184
HTO C3 O3 sing N N 185
HTO C3 C4 sing N N 186
HTO C3 H3 sing N N 187
HTO O3 HO3 sing N N 188
HTO C4 C5 sing N N 189
HTO C4 H41 sing N N 190
HTO C4 H42 sing N N 191
HTO C5 C6 sing N N 192
HTO C5 H51 sing N N 193
HTO C5 H52 sing N N 194
HTO C6 C7 sing N N 195
HTO C6 H61 sing N N 196
HTO C6 H62 sing N N 197
HTO C7 H71 sing N N 198
HTO C7 H72 sing N N 199
HTO C7 H73 sing N N 200
ILE N CA sing N N 201
ILE N H sing N N 202
ILE N H2 sing N N 203
ILE CA C sing N N 204
ILE CA CB sing N N 205
ILE CA HA sing N N 206
ILE C O doub N N 207
ILE C OXT sing N N 208
ILE CB CG1 sing N N 209
ILE CB CG2 sing N N 210
ILE CB HB sing N N 211
ILE CG1 CD1 sing N N 212
ILE CG1 HG12 sing N N 213
ILE CG1 HG13 sing N N 214
ILE CG2 HG21 sing N N 215
ILE CG2 HG22 sing N N 216
ILE CG2 HG23 sing N N 217
ILE CD1 HD11 sing N N 218
ILE CD1 HD12 sing N N 219
ILE CD1 HD13 sing N N 220
ILE OXT HXT sing N N 221
LEU N CA sing N N 222
LEU N H sing N N 223
LEU N H2 sing N N 224
LEU CA C sing N N 225
LEU CA CB sing N N 226
LEU CA HA sing N N 227
LEU C O doub N N 228
LEU C OXT sing N N 229
LEU CB CG sing N N 230
LEU CB HB2 sing N N 231
LEU CB HB3 sing N N 232
LEU CG CD1 sing N N 233
LEU CG CD2 sing N N 234
LEU CG HG sing N N 235
LEU CD1 HD11 sing N N 236
LEU CD1 HD12 sing N N 237
LEU CD1 HD13 sing N N 238
LEU CD2 HD21 sing N N 239
LEU CD2 HD22 sing N N 240
LEU CD2 HD23 sing N N 241
LEU OXT HXT sing N N 242
LYS N CA sing N N 243
LYS N H sing N N 244
LYS N H2 sing N N 245
LYS CA C sing N N 246
LYS CA CB sing N N 247
LYS CA HA sing N N 248
LYS C O doub N N 249
LYS C OXT sing N N 250
LYS CB CG sing N N 251
LYS CB HB2 sing N N 252
LYS CB HB3 sing N N 253
LYS CG CD sing N N 254
LYS CG HG2 sing N N 255
LYS CG HG3 sing N N 256
LYS CD CE sing N N 257
LYS CD HD2 sing N N 258
LYS CD HD3 sing N N 259
LYS CE NZ sing N N 260
LYS CE HE2 sing N N 261
LYS CE HE3 sing N N 262
LYS NZ HZ1 sing N N 263
LYS NZ HZ2 sing N N 264
LYS NZ HZ3 sing N N 265
LYS OXT HXT sing N N 266
MET N CA sing N N 267
MET N H sing N N 268
MET N H2 sing N N 269
MET CA C sing N N 270
MET CA CB sing N N 271
MET CA HA sing N N 272
MET C O doub N N 273
MET C OXT sing N N 274
MET CB CG sing N N 275
MET CB HB2 sing N N 276
MET CB HB3 sing N N 277
MET CG SD sing N N 278
MET CG HG2 sing N N 279
MET CG HG3 sing N N 280
MET SD CE sing N N 281
MET CE HE1 sing N N 282
MET CE HE2 sing N N 283
MET CE HE3 sing N N 284
MET OXT HXT sing N N 285
NAG C1 C2 sing N N 286
NAG C1 O1 sing N N 287
NAG C1 O5 sing N N 288
NAG C1 H1 sing N N 289
NAG C2 C3 sing N N 290
NAG C2 N2 sing N N 291
NAG C2 H2 sing N N 292
NAG C3 C4 sing N N 293
NAG C3 O3 sing N N 294
NAG C3 H3 sing N N 295
NAG C4 C5 sing N N 296
NAG C4 O4 sing N N 297
NAG C4 H4 sing N N 298
NAG C5 C6 sing N N 299
NAG C5 O5 sing N N 300
NAG C5 H5 sing N N 301
NAG C6 O6 sing N N 302
NAG C6 H61 sing N N 303
NAG C6 H62 sing N N 304
NAG C7 C8 sing N N 305
NAG C7 N2 sing N N 306
NAG C7 O7 doub N N 307
NAG C8 H81 sing N N 308
NAG C8 H82 sing N N 309
NAG C8 H83 sing N N 310
NAG N2 HN2 sing N N 311
NAG O1 HO1 sing N N 312
NAG O3 HO3 sing N N 313
NAG O4 HO4 sing N N 314
NAG O6 HO6 sing N N 315
PHE N CA sing N N 316
PHE N H sing N N 317
PHE N H2 sing N N 318
PHE CA C sing N N 319
PHE CA CB sing N N 320
PHE CA HA sing N N 321
PHE C O doub N N 322
PHE C OXT sing N N 323
PHE CB CG sing N N 324
PHE CB HB2 sing N N 325
PHE CB HB3 sing N N 326
PHE CG CD1 doub Y N 327
PHE CG CD2 sing Y N 328
PHE CD1 CE1 sing Y N 329
PHE CD1 HD1 sing N N 330
PHE CD2 CE2 doub Y N 331
PHE CD2 HD2 sing N N 332
PHE CE1 CZ doub Y N 333
PHE CE1 HE1 sing N N 334
PHE CE2 CZ sing Y N 335
PHE CE2 HE2 sing N N 336
PHE CZ HZ sing N N 337
PHE OXT HXT sing N N 338
PRO N CA sing N N 339
PRO N CD sing N N 340
PRO N H sing N N 341
PRO CA C sing N N 342
PRO CA CB sing N N 343
PRO CA HA sing N N 344
PRO C O doub N N 345
PRO C OXT sing N N 346
PRO CB CG sing N N 347
PRO CB HB2 sing N N 348
PRO CB HB3 sing N N 349
PRO CG CD sing N N 350
PRO CG HG2 sing N N 351
PRO CG HG3 sing N N 352
PRO CD HD2 sing N N 353
PRO CD HD3 sing N N 354
PRO OXT HXT sing N N 355
SER N CA sing N N 356
SER N H sing N N 357
SER N H2 sing N N 358
SER CA C sing N N 359
SER CA CB sing N N 360
SER CA HA sing N N 361
SER C O doub N N 362
SER C OXT sing N N 363
SER CB OG sing N N 364
SER CB HB2 sing N N 365
SER CB HB3 sing N N 366
SER OG HG sing N N 367
SER OXT HXT sing N N 368
THR N CA sing N N 369
THR N H sing N N 370
THR N H2 sing N N 371
THR CA C sing N N 372
THR CA CB sing N N 373
THR CA HA sing N N 374
THR C O doub N N 375
THR C OXT sing N N 376
THR CB OG1 sing N N 377
THR CB CG2 sing N N 378
THR CB HB sing N N 379
THR OG1 HG1 sing N N 380
THR CG2 HG21 sing N N 381
THR CG2 HG22 sing N N 382
THR CG2 HG23 sing N N 383
THR OXT HXT sing N N 384
TRP N CA sing N N 385
TRP N H sing N N 386
TRP N H2 sing N N 387
TRP CA C sing N N 388
TRP CA CB sing N N 389
TRP CA HA sing N N 390
TRP C O doub N N 391
TRP C OXT sing N N 392
TRP CB CG sing N N 393
TRP CB HB2 sing N N 394
TRP CB HB3 sing N N 395
TRP CG CD1 doub Y N 396
TRP CG CD2 sing Y N 397
TRP CD1 NE1 sing Y N 398
TRP CD1 HD1 sing N N 399
TRP CD2 CE2 doub Y N 400
TRP CD2 CE3 sing Y N 401
TRP NE1 CE2 sing Y N 402
TRP NE1 HE1 sing N N 403
TRP CE2 CZ2 sing Y N 404
TRP CE3 CZ3 doub Y N 405
TRP CE3 HE3 sing N N 406
TRP CZ2 CH2 doub Y N 407
TRP CZ2 HZ2 sing N N 408
TRP CZ3 CH2 sing Y N 409
TRP CZ3 HZ3 sing N N 410
TRP CH2 HH2 sing N N 411
TRP OXT HXT sing N N 412
TYR N CA sing N N 413
TYR N H sing N N 414
TYR N H2 sing N N 415
TYR CA C sing N N 416
TYR CA CB sing N N 417
TYR CA HA sing N N 418
TYR C O doub N N 419
TYR C OXT sing N N 420
TYR CB CG sing N N 421
TYR CB HB2 sing N N 422
TYR CB HB3 sing N N 423
TYR CG CD1 doub Y N 424
TYR CG CD2 sing Y N 425
TYR CD1 CE1 sing Y N 426
TYR CD1 HD1 sing N N 427
TYR CD2 CE2 doub Y N 428
TYR CD2 HD2 sing N N 429
TYR CE1 CZ doub Y N 430
TYR CE1 HE1 sing N N 431
TYR CE2 CZ sing Y N 432
TYR CE2 HE2 sing N N 433
TYR CZ OH sing N N 434
TYR OH HH sing N N 435
TYR OXT HXT sing N N 436
VAL N CA sing N N 437
VAL N H sing N N 438
VAL N H2 sing N N 439
VAL CA C sing N N 440
VAL CA CB sing N N 441
VAL CA HA sing N N 442
VAL C O doub N N 443
VAL C OXT sing N N 444
VAL CB CG1 sing N N 445
VAL CB CG2 sing N N 446
VAL CB HB sing N N 447
VAL CG1 HG11 sing N N 448
VAL CG1 HG12 sing N N 449
VAL CG1 HG13 sing N N 450
VAL CG2 HG21 sing N N 451
VAL CG2 HG22 sing N N 452
VAL CG2 HG23 sing N N 453
VAL OXT HXT sing N N 454
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NAG 1 n
2 GLA 2 n
#
_atom_sites.entry_id 1AY2
_atom_sites.fract_transf_matrix[1][1] 0.007838
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.008259
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.037230
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
PT
S
#
loop_