HEADER    INTEGRASE/DNA                           21-JAN-99   1B69              
TITLE     THE SOLUTION STRUCTURE OF TN916 INTEGRASE N-TERMINAL DOMAIN/DNA       
TITLE    2 COMPLEX                                                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-D(*GP*AP*GP*TP*AP*GP*TP*AP*AP*AP*TP*TP*C)-3');     
COMPND   3 CHAIN: B;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: DNA (5'-D(*GP*AP*AP*TP*TP*TP*AP*CP*TP*AP*CP*TP*C)-3');     
COMPND   7 CHAIN: C;                                                            
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: PROTEIN (INTEGRASE);                                       
COMPND  11 CHAIN: A;                                                            
COMPND  12 FRAGMENT: N-TERMINAL DNA BINDING DOMAIN;                             
COMPND  13 ENGINEERED: YES;                                                     
COMPND  14 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   4 ORGANISM_TAXID: 32630;                                               
SOURCE   5 MOL_ID: 2;                                                           
SOURCE   6 SYNTHETIC: YES;                                                      
SOURCE   7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   8 ORGANISM_TAXID: 32630;                                               
SOURCE   9 MOL_ID: 3;                                                           
SOURCE  10 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS;                          
SOURCE  11 ORGANISM_TAXID: 1351;                                                
SOURCE  12 STRAIN: BL21(DE3);                                                   
SOURCE  13 CELLULAR_LOCATION: CYTOPLASM;                                        
SOURCE  14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE  15 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE  16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE  17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  18 EXPRESSION_SYSTEM_PLASMID: PET11A                                    
KEYWDS    INTEGRASE, DNA BINDING, TRANSPOSITION, COMPLEX, BETA-SHEET            
KEYWDS   2 RECOGNITION, INTEGRASE-DNA COMPLEX                                   
EXPDTA    SOLUTION NMR                                                          
AUTHOR    R.T.CLUBB,J.M.WOJCIAK,K.M.CONNOLLY                                    
REVDAT   7   27-DEC-23 1B69    1       SEQADV                                   
REVDAT   6   16-OCT-19 1B69    1       SOURCE REMARK ATOM                       
REVDAT   5   14-MAR-18 1B69    1       REMARK SEQADV                            
REVDAT   4   24-FEB-09 1B69    1       VERSN                                    
REVDAT   3   01-APR-03 1B69    1       JRNL                                     
REVDAT   2   28-OCT-99 1B69    1       HELIX                                    
REVDAT   1   29-SEP-99 1B69    0                                                
JRNL        AUTH   J.M.WOJCIAK,K.M.CONNOLLY,R.T.CLUBB                           
JRNL        TITL   NMR STRUCTURE OF THE TN916 INTEGRASE-DNA COMPLEX.            
JRNL        REF    NAT.STRUCT.BIOL.              V.   6   366 1999              
JRNL        REFN                   ISSN 1072-8368                               
JRNL        PMID   10201406                                                     
JRNL        DOI    10.1038/7603                                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR 3.843                                         
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1B69 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-99.                  
REMARK 100 THE DEPOSITION ID IS D_1000007237.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 305                                
REMARK 210  PH                             : 6.0                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : NULL                               
REMARK 210  SAMPLE CONTENTS                : NULL                               
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : NOESY ETC.                         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : DRX                                
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : X-PLOR 3.843                       
REMARK 210   METHOD USED                   : DISTANCE GEOMETRY AND SIMULATED    
REMARK 210                                   ANNEALING                          
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 1                                  
REMARK 210 CONFORMERS, SELECTION CRITERIA  : LEAST RESTRAINT VIOLATION          
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THREE AND FOUR-DIMENSIONAL HETERONUCLEAR NMR EXPERIMENTS     
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DT C 125   C5     DT C 125   C7      0.036                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DG B 101   O4' -  C1' -  N9  ANGL. DEV. =   3.5 DEGREES          
REMARK 500     DA B 102   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DG B 103   O4' -  C1' -  N9  ANGL. DEV. =   3.3 DEGREES          
REMARK 500     DT B 104   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DA B 105   O4' -  C1' -  N9  ANGL. DEV. =   2.8 DEGREES          
REMARK 500     DG B 106   O4' -  C1' -  N9  ANGL. DEV. =   3.3 DEGREES          
REMARK 500     DT B 107   O4' -  C1' -  N1  ANGL. DEV. =   2.8 DEGREES          
REMARK 500     DA B 108   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DA B 109   O4' -  C1' -  N9  ANGL. DEV. =   2.9 DEGREES          
REMARK 500     DA B 110   O4' -  C1' -  N9  ANGL. DEV. =   2.7 DEGREES          
REMARK 500     DT B 111   O4' -  C1' -  N1  ANGL. DEV. =   2.8 DEGREES          
REMARK 500     DT B 112   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DC B 113   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500     DG C 114   O4' -  C1' -  N9  ANGL. DEV. =   2.1 DEGREES          
REMARK 500     DA C 115   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DA C 116   O4' -  C1' -  N9  ANGL. DEV. =   3.4 DEGREES          
REMARK 500     DT C 117   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500     DT C 118   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500     DT C 119   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DA C 120   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500     DC C 121   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500     DT C 122   O4' -  C1' -  N1  ANGL. DEV. =   2.6 DEGREES          
REMARK 500     DT C 122   C6  -  C5  -  C7  ANGL. DEV. =  -3.7 DEGREES          
REMARK 500     DA C 123   O4' -  C1' -  N9  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DC C 124   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500     DT C 125   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500     DC C 126   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A   9     -108.02   -104.99                                   
REMARK 500    THR A  15      162.79    -46.76                                   
REMARK 500    SER A  18     -162.84   -176.07                                   
REMARK 500    ARG A  20     -154.16    -84.65                                   
REMARK 500    SER A  32       11.66    -66.56                                   
REMARK 500    PRO A  36      151.92    -42.80                                   
REMARK 500    ALA A  46       65.70    -69.42                                   
REMARK 500    THR A  47      -31.56   -151.78                                   
REMARK 500    ASP A  48     -164.11    -68.14                                   
REMARK 500    LYS A  69      -94.59    -74.50                                   
REMARK 500    ASP A  70      -44.59   -157.23                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1TN9   RELATED DB: PDB                                   
REMARK 900 20 STRUCTURES                                                        
DBREF  1B69 A    3    71  UNP    P22886   TNR6_ENTFA       3     71             
DBREF  1B69 B  101   113  PDB    1B69     1B69           101    113             
DBREF  1B69 C  114   126  PDB    1B69     1B69           114    126             
SEQADV 1B69 ALA A   57  UNP  P22886    CYS    57 ENGINEERED MUTATION            
SEQRES   1 B   13   DG  DA  DG  DT  DA  DG  DT  DA  DA  DA  DT  DT  DC          
SEQRES   1 C   13   DG  DA  DA  DT  DT  DT  DA  DC  DT  DA  DC  DT  DC          
SEQRES   1 A   69  GLU LYS ARG ARG ASP ASN ARG GLY ARG ILE LEU LYS THR          
SEQRES   2 A   69  GLY GLU SER GLN ARG LYS ASP GLY ARG TYR LEU TYR LYS          
SEQRES   3 A   69  TYR ILE ASP SER PHE GLY GLU PRO GLN PHE VAL TYR SER          
SEQRES   4 A   69  TRP LYS LEU VAL ALA THR ASP ARG VAL PRO ALA GLY LYS          
SEQRES   5 A   69  ARG ASP ALA ILE SER LEU ARG GLU LYS ILE ALA GLU LEU          
SEQRES   6 A   69  GLN LYS ASP ILE                                              
HELIX    1   1 SER A   59  LYS A   69  1                                  11    
SHEET    1   A 3 GLU A  17  GLN A  19  0                                        
SHEET    2   A 3 TYR A  25  ILE A  30  0                                        
SHEET    3   A 3 PRO A  36  SER A  41  0                                        
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000