data_1BFZ # _entry.id 1BFZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BFZ pdb_00001bfz 10.2210/pdb1bfz/pdb WWPDB D_1000171709 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-05-25 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-06-05 5 'Structure model' 1 4 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Derived calculations' 11 4 'Structure model' Other 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_nmr_software 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BFZ _pdbx_database_status.recvd_initial_deposition_date 1998-05-25 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Laplante, S.R.' 1 'Aubry, N.' 2 'Bonneau, P.R.' 3 'Cameron, D.R.' 4 'Lagace, L.' 5 'Massariol, M.-J.' 6 'Montpetit, H.' 7 'Ploufe, C.' 8 'Kawai, S.H.' 9 'Fulton, B.D.' 10 'Chen, Z.' 11 'Ni, F.' 12 # _citation.id primary _citation.title 'Human cytomegalovirus protease complexes its substrate recognition sequences in an extended peptide conformation.' _citation.journal_abbrev Biochemistry _citation.journal_volume 37 _citation.page_first 9793 _citation.page_last 9801 _citation.year 1998 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9657693 _citation.pdbx_database_id_DOI 10.1021/bi980555v # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'LaPlante, S.R.' 1 ? primary 'Aubry, N.' 2 ? primary 'Bonneau, P.R.' 3 ? primary 'Cameron, D.R.' 4 ? primary 'Lagace, L.' 5 ? primary 'Massariol, M.J.' 6 ? primary 'Montpetit, H.' 7 ? primary 'Plouffe, C.' 8 ? primary 'Kawai, S.H.' 9 ? primary 'Fulton, B.D.' 10 ? primary 'Chen, Z.' 11 ? primary 'Ni, F.' 12 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'HCMV PROTEASE R-SITE N-TERMINAL CLEAVAGE PRODUCT' _entity.formula_weight 593.693 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'TERESYVKA N-TERMINAL RESIDUES OF R-SITE PEPTIDE' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)SYVKA' _entity_poly.pdbx_seq_one_letter_code_can XSYVKA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 TYR n 1 4 VAL n 1 5 LYS n 1 6 ALA n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 6 6 ACE ACE A . n A 1 2 SER 2 5 5 SER SER A . n A 1 3 TYR 3 4 4 TYR TYR A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 LYS 5 2 2 LYS LYS A . n A 1 6 ALA 6 1 1 ALA ALA A . n # _cell.entry_id 1BFZ _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BFZ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1BFZ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1BFZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1BFZ _struct.title ;BOUND CONFORMATION OF N-TERMINAL CLEAVAGE PRODUCT PEPTIDE MIMIC (P1-P9 OF RELEASE SITE) WHILE BOUND TO HCMV PROTEASE AS DETERMINED BY TRANSFERRED NOESY EXPERIMENTS (P1-P5 SHOWN ONLY), NMR, 32 STRUCTURES ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BFZ _struct_keywords.pdbx_keywords PEPTIDE _struct_keywords.text 'SUBSTRIATE CLEAVAGE, BOUND CONFORMATION, EXTENDED CONFORMATION, substrate-based competitive inhibitor design' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag Y _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 1BFZ _struct_ref.pdbx_db_accession 1BFZ _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BFZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1BFZ _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 2 _struct_conn.ptnr1_label_atom_id N _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id ACE _struct_conn.ptnr2_label_seq_id 1 _struct_conn.ptnr2_label_atom_id C _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 5 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ACE _struct_conn.ptnr2_auth_seq_id 6 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.376 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id ACE _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 1 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id SER _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 2 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id ACE _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 6 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id SER _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 5 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id SER _pdbx_modification_feature.ref_pcm_id 6 _pdbx_modification_feature.ref_comp_id ACE _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Terminal acetylation' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ACE _struct_site.pdbx_auth_seq_id 6 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE ACE A 6' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 TYR A 3 ? TYR A 4 . ? 1_555 ? 2 AC1 2 SER A 2 ? SER A 5 . ? 1_555 ? # _pdbx_entry_details.entry_id 1BFZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 2 2 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.356 1.229 0.127 0.019 N 3 3 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 4 4 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.356 1.229 0.127 0.019 N 5 5 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 6 6 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 7 7 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 8 8 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 9 9 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 10 10 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 11 11 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.356 1.229 0.127 0.019 N 12 12 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 13 13 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 14 14 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 15 15 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.359 1.229 0.130 0.019 N 16 16 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 17 17 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.361 1.229 0.132 0.019 N 18 18 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 19 19 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 20 20 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.361 1.229 0.132 0.019 N 21 21 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 22 22 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 23 23 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.364 1.229 0.135 0.019 N 24 24 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.358 1.229 0.129 0.019 N 25 25 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 26 26 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 27 27 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 28 28 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.354 1.229 0.125 0.019 N 29 29 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.360 1.229 0.131 0.019 N 30 30 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.359 1.229 0.130 0.019 N 31 31 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.355 1.229 0.126 0.019 N 32 32 C A ALA 1 ? ? OXT A ALA 1 ? ? 1.362 1.229 0.133 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.33 110.50 9.83 1.50 N 2 3 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.38 110.50 9.88 1.50 N 3 4 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.82 110.50 10.32 1.50 N 4 5 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.27 110.50 9.77 1.50 N 5 6 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.01 110.50 9.51 1.50 N 6 8 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 119.98 110.50 9.48 1.50 N 7 9 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.30 110.50 9.80 1.50 N 8 10 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.92 110.50 11.42 1.50 N 9 11 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.24 110.50 9.74 1.50 N 10 12 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.63 110.50 11.13 1.50 N 11 13 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.99 110.50 11.49 1.50 N 12 14 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.80 110.50 11.30 1.50 N 13 16 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 119.70 110.50 9.20 1.50 N 14 18 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.24 110.50 9.74 1.50 N 15 20 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.78 110.50 11.28 1.50 N 16 21 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 122.01 110.50 11.51 1.50 N 17 22 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.60 110.50 11.10 1.50 N 18 23 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.23 110.50 9.73 1.50 N 19 24 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.84 110.50 11.34 1.50 N 20 25 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.21 110.50 9.71 1.50 N 21 26 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.04 110.50 9.54 1.50 N 22 28 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.88 110.50 11.38 1.50 N 23 29 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.82 110.50 11.32 1.50 N 24 30 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.16 110.50 9.66 1.50 N 25 31 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 121.95 110.50 11.45 1.50 N 26 32 N A SER 5 ? ? CA A SER 5 ? ? CB A SER 5 ? ? 120.79 110.50 10.29 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 6 LYS A 2 ? ? -88.61 49.40 2 10 LYS A 2 ? ? -92.17 54.96 3 15 TYR A 4 ? ? 75.20 177.66 # _pdbx_nmr_ensemble.entry_id 1BFZ _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 32 _pdbx_nmr_ensemble.conformer_selection_criteria 'POTENTIAL ENERGY, MINIMAL RESTRAINT VIOLATIONS' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1BFZ _pdbx_nmr_representative.conformer_id 4 _pdbx_nmr_representative.selection_criteria ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.5M NA2SO4, 50MM NACL, 1MM EDTA, 5MM DTT-D10 IN 10% D2O SPIKED WITH TSP-2,2,3,3-D4' _pdbx_nmr_sample_details.solvent_system ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 285 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 TRNOESY 1 2 1 NOESY 1 3 1 TOCSY 1 # _pdbx_nmr_details.entry_id 1BFZ _pdbx_nmr_details.text 'TRANSFERRED NUCLEAR OVERHAUSER EFFECT SPECTROSCOPY 50, 150, 250 MS MIXING TIMES USED TO GENERATE RESTRAINTS' # _pdbx_nmr_refine.entry_id 1BFZ _pdbx_nmr_refine.method 'RESTRAINED SIMULATED ANNEALING' _pdbx_nmr_refine.details 'REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. CFF95 FORCEFIELD USED.' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement Discover 95.5 MSI 1 'structure solution' Discover 95.5 ? 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 LYS N N N N 21 LYS CA C N S 22 LYS C C N N 23 LYS O O N N 24 LYS CB C N N 25 LYS CG C N N 26 LYS CD C N N 27 LYS CE C N N 28 LYS NZ N N N 29 LYS OXT O N N 30 LYS H H N N 31 LYS H2 H N N 32 LYS HA H N N 33 LYS HB2 H N N 34 LYS HB3 H N N 35 LYS HG2 H N N 36 LYS HG3 H N N 37 LYS HD2 H N N 38 LYS HD3 H N N 39 LYS HE2 H N N 40 LYS HE3 H N N 41 LYS HZ1 H N N 42 LYS HZ2 H N N 43 LYS HZ3 H N N 44 LYS HXT H N N 45 SER N N N N 46 SER CA C N S 47 SER C C N N 48 SER O O N N 49 SER CB C N N 50 SER OG O N N 51 SER OXT O N N 52 SER H H N N 53 SER H2 H N N 54 SER HA H N N 55 SER HB2 H N N 56 SER HB3 H N N 57 SER HG H N N 58 SER HXT H N N 59 TYR N N N N 60 TYR CA C N S 61 TYR C C N N 62 TYR O O N N 63 TYR CB C N N 64 TYR CG C Y N 65 TYR CD1 C Y N 66 TYR CD2 C Y N 67 TYR CE1 C Y N 68 TYR CE2 C Y N 69 TYR CZ C Y N 70 TYR OH O N N 71 TYR OXT O N N 72 TYR H H N N 73 TYR H2 H N N 74 TYR HA H N N 75 TYR HB2 H N N 76 TYR HB3 H N N 77 TYR HD1 H N N 78 TYR HD2 H N N 79 TYR HE1 H N N 80 TYR HE2 H N N 81 TYR HH H N N 82 TYR HXT H N N 83 VAL N N N N 84 VAL CA C N S 85 VAL C C N N 86 VAL O O N N 87 VAL CB C N N 88 VAL CG1 C N N 89 VAL CG2 C N N 90 VAL OXT O N N 91 VAL H H N N 92 VAL H2 H N N 93 VAL HA H N N 94 VAL HB H N N 95 VAL HG11 H N N 96 VAL HG12 H N N 97 VAL HG13 H N N 98 VAL HG21 H N N 99 VAL HG22 H N N 100 VAL HG23 H N N 101 VAL HXT H N N 102 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 LYS N CA sing N N 19 LYS N H sing N N 20 LYS N H2 sing N N 21 LYS CA C sing N N 22 LYS CA CB sing N N 23 LYS CA HA sing N N 24 LYS C O doub N N 25 LYS C OXT sing N N 26 LYS CB CG sing N N 27 LYS CB HB2 sing N N 28 LYS CB HB3 sing N N 29 LYS CG CD sing N N 30 LYS CG HG2 sing N N 31 LYS CG HG3 sing N N 32 LYS CD CE sing N N 33 LYS CD HD2 sing N N 34 LYS CD HD3 sing N N 35 LYS CE NZ sing N N 36 LYS CE HE2 sing N N 37 LYS CE HE3 sing N N 38 LYS NZ HZ1 sing N N 39 LYS NZ HZ2 sing N N 40 LYS NZ HZ3 sing N N 41 LYS OXT HXT sing N N 42 SER N CA sing N N 43 SER N H sing N N 44 SER N H2 sing N N 45 SER CA C sing N N 46 SER CA CB sing N N 47 SER CA HA sing N N 48 SER C O doub N N 49 SER C OXT sing N N 50 SER CB OG sing N N 51 SER CB HB2 sing N N 52 SER CB HB3 sing N N 53 SER OG HG sing N N 54 SER OXT HXT sing N N 55 TYR N CA sing N N 56 TYR N H sing N N 57 TYR N H2 sing N N 58 TYR CA C sing N N 59 TYR CA CB sing N N 60 TYR CA HA sing N N 61 TYR C O doub N N 62 TYR C OXT sing N N 63 TYR CB CG sing N N 64 TYR CB HB2 sing N N 65 TYR CB HB3 sing N N 66 TYR CG CD1 doub Y N 67 TYR CG CD2 sing Y N 68 TYR CD1 CE1 sing Y N 69 TYR CD1 HD1 sing N N 70 TYR CD2 CE2 doub Y N 71 TYR CD2 HD2 sing N N 72 TYR CE1 CZ doub Y N 73 TYR CE1 HE1 sing N N 74 TYR CE2 CZ sing Y N 75 TYR CE2 HE2 sing N N 76 TYR CZ OH sing N N 77 TYR OH HH sing N N 78 TYR OXT HXT sing N N 79 VAL N CA sing N N 80 VAL N H sing N N 81 VAL N H2 sing N N 82 VAL CA C sing N N 83 VAL CA CB sing N N 84 VAL CA HA sing N N 85 VAL C O doub N N 86 VAL C OXT sing N N 87 VAL CB CG1 sing N N 88 VAL CB CG2 sing N N 89 VAL CB HB sing N N 90 VAL CG1 HG11 sing N N 91 VAL CG1 HG12 sing N N 92 VAL CG1 HG13 sing N N 93 VAL CG2 HG21 sing N N 94 VAL CG2 HG22 sing N N 95 VAL CG2 HG23 sing N N 96 VAL OXT HXT sing N N 97 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 AMX400 Bruker 400 ? 2 AMX500 Bruker 500 ? 3 DRX500 Bruker 600 ? 4 DMX600 Bruker 600 ? # _atom_sites.entry_id 1BFZ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_