data_1BHL # _entry.id 1BHL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BHL pdb_00001bhl 10.2210/pdb1bhl/pdb WWPDB D_1000171766 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BHL _pdbx_database_status.recvd_initial_deposition_date 1998-06-10 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Maignan, S.' 1 'Guilloteau, J.P.' 2 'Zhou-Liu, Q.' 3 'Clement-Mella, C.' 4 'Mikol, V.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases. ; J.Mol.Biol. 282 359 368 1998 JMOBAK UK 0022-2836 0070 ? 9735293 10.1006/jmbi.1998.2002 1 'Crystal Structure of the Catalytic Domain of HIV-1 Integrase: Similarity to Other Polynucleotidyl Transferases' Science 266 1981 ? 1994 SCIEAS US 0036-8075 0038 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maignan, S.' 1 ? primary 'Guilloteau, J.P.' 2 ? primary 'Zhou-Liu, Q.' 3 ? primary 'Clement-Mella, C.' 4 ? primary 'Mikol, V.' 5 ? 1 'Dyda, F.' 6 ? 1 'Hickman, A.B.' 7 ? 1 'Jenkins, T.M.' 8 ? 1 'Engelman, A.' 9 ? 1 'Craigie, R.' 10 ? 1 'Davies, D.R.' 11 ? # _cell.entry_id 1BHL _cell.length_a 72.500 _cell.length_b 72.500 _cell.length_c 65.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BHL _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 INTEGRASE' 16756.842 1 2.7.7.49 F185H 'CATALYTIC CORE DOMAIN, RESIDUES 50 - 212' 'RESIDUES CAS 65 AND CAS 130 ARE CACODYLATED CYSTEINES' 2 water nat water 18.015 53 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SPGIWQLD(CAS)THLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA (CAS)WWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGGIGGYSAGERIVDIIA TD ; _entity_poly.pdbx_seq_one_letter_code_can ;SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIK QEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGGIGGYSAGERIVDIIATD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PRO n 1 3 GLY n 1 4 ILE n 1 5 TRP n 1 6 GLN n 1 7 LEU n 1 8 ASP n 1 9 CAS n 1 10 THR n 1 11 HIS n 1 12 LEU n 1 13 GLU n 1 14 GLY n 1 15 LYS n 1 16 VAL n 1 17 ILE n 1 18 LEU n 1 19 VAL n 1 20 ALA n 1 21 VAL n 1 22 HIS n 1 23 VAL n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 TYR n 1 28 ILE n 1 29 GLU n 1 30 ALA n 1 31 GLU n 1 32 VAL n 1 33 ILE n 1 34 PRO n 1 35 ALA n 1 36 GLU n 1 37 THR n 1 38 GLY n 1 39 GLN n 1 40 GLU n 1 41 THR n 1 42 ALA n 1 43 TYR n 1 44 PHE n 1 45 LEU n 1 46 LEU n 1 47 LYS n 1 48 LEU n 1 49 ALA n 1 50 GLY n 1 51 ARG n 1 52 TRP n 1 53 PRO n 1 54 VAL n 1 55 LYS n 1 56 THR n 1 57 VAL n 1 58 HIS n 1 59 THR n 1 60 ASP n 1 61 ASN n 1 62 GLY n 1 63 SER n 1 64 ASN n 1 65 PHE n 1 66 THR n 1 67 SER n 1 68 THR n 1 69 THR n 1 70 VAL n 1 71 LYS n 1 72 ALA n 1 73 ALA n 1 74 CAS n 1 75 TRP n 1 76 TRP n 1 77 ALA n 1 78 GLY n 1 79 ILE n 1 80 LYS n 1 81 GLN n 1 82 GLU n 1 83 PHE n 1 84 GLY n 1 85 ILE n 1 86 PRO n 1 87 TYR n 1 88 ASN n 1 89 PRO n 1 90 GLN n 1 91 SER n 1 92 GLN n 1 93 GLY n 1 94 VAL n 1 95 ILE n 1 96 GLU n 1 97 SER n 1 98 MET n 1 99 ASN n 1 100 LYS n 1 101 GLU n 1 102 LEU n 1 103 LYS n 1 104 LYS n 1 105 ILE n 1 106 ILE n 1 107 GLY n 1 108 GLN n 1 109 VAL n 1 110 ARG n 1 111 ASP n 1 112 GLN n 1 113 ALA n 1 114 GLU n 1 115 HIS n 1 116 LEU n 1 117 LYS n 1 118 THR n 1 119 ALA n 1 120 VAL n 1 121 GLN n 1 122 MET n 1 123 ALA n 1 124 VAL n 1 125 PHE n 1 126 ILE n 1 127 HIS n 1 128 ASN n 1 129 HIS n 1 130 LYS n 1 131 ARG n 1 132 LYS n 1 133 GLY n 1 134 GLY n 1 135 ILE n 1 136 GLY n 1 137 GLY n 1 138 TYR n 1 139 SER n 1 140 ALA n 1 141 GLY n 1 142 GLU n 1 143 ARG n 1 144 ILE n 1 145 VAL n 1 146 ASP n 1 147 ILE n 1 148 ILE n 1 149 ALA n 1 150 THR n 1 151 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line BL21 _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-15B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'EXPRESSION CLONE FOR CORE, REFER TO PNAS USA, VOL. 90, PP. 3428-3432, APRIL 1993, AND PNAS USA 92, PP. 6057-6061, JUNE 1995' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1N5 _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P12497 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;FFREDLAFPQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALL DTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVGQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPI ETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQ DFWEVQLGIPHPAGLKQKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMT KILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIV LPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGVYYDPSKDL IAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMKGAHTNDVKQLTEAVQKIATESIVIWGKTPKFKLPIQKETWEAWWTEY WQATWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVPLTDTTNQKTELQAIHLA LQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDGLVSAGIRKVLFLDGI DKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIE AEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQV RDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDPVWKGPAKLLWKG EGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BHL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 151 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P12497 _struct_ref_seq.db_align_beg 772 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 922 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 57 _struct_ref_seq.pdbx_auth_seq_align_end 207 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1BHL CAS A 9 ? UNP P12497 CYS 780 'modified residue' 65 1 1 1BHL CAS A 74 ? UNP P12497 CYS 845 'modified residue' 130 2 1 1BHL HIS A 129 ? UNP P12497 PHE 900 'engineered mutation' 185 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CAS 'L-peptide linking' n 'S-(DIMETHYLARSENIC)CYSTEINE' ? 'C5 H12 As N O2 S' 225.141 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1BHL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 41.5 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '3-9% PEG 8000, 0.4M AMMONIUM SULFATE, 0.1M SODIUM CACODYLATE PH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MACSCIENCE _diffrn_detector.pdbx_collection_date 1996-08-21 _diffrn_detector.details 'DOUBLE FOCUSING MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR591' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1BHL _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.0 _reflns.d_resolution_high 2.2 _reflns.number_obs 10359 _reflns.number_all ? _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs 0.0430000 _reflns.pdbx_Rsym_value 0.0430000 _reflns.pdbx_netI_over_sigmaI 8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.6 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.25 _reflns_shell.percent_possible_all 93.7 _reflns_shell.Rmerge_I_obs 0.1530000 _reflns_shell.pdbx_Rsym_value 0.1530000 _reflns_shell.meanI_over_sigI_obs 7.3 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1BHL _refine.ls_number_reflns_obs 10074 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.0 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 97.47 _refine.ls_R_factor_obs 0.2240000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2240000 _refine.ls_R_factor_R_free 0.2640000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7 _refine.ls_number_reflns_R_free 729 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 33.95 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1ITG' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1048 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 53 _refine_hist.number_atoms_total 1101 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 15.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.2 _refine_ls_shell.d_res_low 2.3 _refine_ls_shell.number_reflns_R_work 1079 _refine_ls_shell.R_factor_R_work 0.2024000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2714000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 7 _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 ? ? 'X-RAY DIFFRACTION' # _struct.entry_id 1BHL _struct.title 'CACODYLATED CATALYTIC DOMAIN OF HIV-1 INTEGRASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BHL _struct_keywords.pdbx_keywords 'DNA INTEGRATION' _struct_keywords.text 'DNA INTEGRATION, AIDS, POLYPROTEIN, HYDROLASE, ENDONUCLEASE, POLYNUCLEOTIDYL TRANSFERASE, DNA BINDING (VIRAL)' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 38 ? ALA A 49 ? GLY A 94 ALA A 105 1 ? 12 HELX_P HELX_P2 2 GLY A 62 ? PHE A 65 ? GLY A 118 PHE A 121 5 ? 4 HELX_P HELX_P3 3 THR A 68 ? TRP A 76 ? THR A 124 TRP A 132 1 ? 9 HELX_P HELX_P4 4 ASN A 99 ? VAL A 109 ? ASN A 155 VAL A 165 1 ? 11 HELX_P HELX_P5 5 LEU A 116 ? HIS A 129 ? LEU A 172 HIS A 185 1 ? 14 HELX_P HELX_P6 6 ALA A 140 ? ALA A 149 ? ALA A 196 ALA A 205 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 8 C ? ? ? 1_555 A CAS 9 N ? ? A ASP 64 A CAS 65 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale2 covale both ? A CAS 9 C ? ? ? 1_555 A THR 10 N ? ? A CAS 65 A THR 66 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale3 covale both ? A ALA 73 C ? ? ? 1_555 A CAS 74 N ? ? A ALA 129 A CAS 130 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? A CAS 74 C ? ? ? 1_555 A TRP 75 N ? ? A CAS 130 A TRP 131 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 56 ? HIS A 58 ? THR A 112 HIS A 114 A 2 ILE A 4 ? ASP A 8 ? ILE A 60 ASP A 64 A 3 VAL A 16 ? HIS A 22 ? VAL A 72 HIS A 78 A 4 TYR A 27 ? ILE A 33 ? TYR A 83 ILE A 89 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 56 ? O THR A 112 N TRP A 5 ? N TRP A 61 A 2 3 O GLN A 6 ? O GLN A 62 N VAL A 21 ? N VAL A 77 A 3 4 O VAL A 16 ? O VAL A 72 N ILE A 33 ? N ILE A 89 # _struct_site.id ACT _struct_site.pdbx_evidence_code Unknown _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'ACTIVE SITE.' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 ACT 2 ASP A 8 ? ASP A 64 . ? 1_555 ? 2 ACT 2 ASP A 60 ? ASP A 116 . ? 1_555 ? # _database_PDB_matrix.entry_id 1BHL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BHL _atom_sites.fract_transf_matrix[1][1] 0.013793 _atom_sites.fract_transf_matrix[1][2] 0.007963 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015927 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015198 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol AS C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 57 57 SER SER A . n A 1 2 PRO 2 58 58 PRO PRO A . n A 1 3 GLY 3 59 59 GLY GLY A . n A 1 4 ILE 4 60 60 ILE ILE A . n A 1 5 TRP 5 61 61 TRP TRP A . n A 1 6 GLN 6 62 62 GLN GLN A . n A 1 7 LEU 7 63 63 LEU LEU A . n A 1 8 ASP 8 64 64 ASP ASP A . n A 1 9 CAS 9 65 65 CAS CAS A . n A 1 10 THR 10 66 66 THR THR A . n A 1 11 HIS 11 67 67 HIS HIS A . n A 1 12 LEU 12 68 68 LEU LEU A . n A 1 13 GLU 13 69 69 GLU GLU A . n A 1 14 GLY 14 70 70 GLY GLY A . n A 1 15 LYS 15 71 71 LYS LYS A . n A 1 16 VAL 16 72 72 VAL VAL A . n A 1 17 ILE 17 73 73 ILE ILE A . n A 1 18 LEU 18 74 74 LEU LEU A . n A 1 19 VAL 19 75 75 VAL VAL A . n A 1 20 ALA 20 76 76 ALA ALA A . n A 1 21 VAL 21 77 77 VAL VAL A . n A 1 22 HIS 22 78 78 HIS HIS A . n A 1 23 VAL 23 79 79 VAL VAL A . n A 1 24 ALA 24 80 80 ALA ALA A . n A 1 25 SER 25 81 81 SER SER A . n A 1 26 GLY 26 82 82 GLY GLY A . n A 1 27 TYR 27 83 83 TYR TYR A . n A 1 28 ILE 28 84 84 ILE ILE A . n A 1 29 GLU 29 85 85 GLU GLU A . n A 1 30 ALA 30 86 86 ALA ALA A . n A 1 31 GLU 31 87 87 GLU GLU A . n A 1 32 VAL 32 88 88 VAL VAL A . n A 1 33 ILE 33 89 89 ILE ILE A . n A 1 34 PRO 34 90 90 PRO PRO A . n A 1 35 ALA 35 91 91 ALA ALA A . n A 1 36 GLU 36 92 92 GLU GLU A . n A 1 37 THR 37 93 93 THR THR A . n A 1 38 GLY 38 94 94 GLY GLY A . n A 1 39 GLN 39 95 95 GLN GLN A . n A 1 40 GLU 40 96 96 GLU GLU A . n A 1 41 THR 41 97 97 THR THR A . n A 1 42 ALA 42 98 98 ALA ALA A . n A 1 43 TYR 43 99 99 TYR TYR A . n A 1 44 PHE 44 100 100 PHE PHE A . n A 1 45 LEU 45 101 101 LEU LEU A . n A 1 46 LEU 46 102 102 LEU LEU A . n A 1 47 LYS 47 103 103 LYS LYS A . n A 1 48 LEU 48 104 104 LEU LEU A . n A 1 49 ALA 49 105 105 ALA ALA A . n A 1 50 GLY 50 106 106 GLY GLY A . n A 1 51 ARG 51 107 107 ARG ARG A . n A 1 52 TRP 52 108 108 TRP TRP A . n A 1 53 PRO 53 109 109 PRO PRO A . n A 1 54 VAL 54 110 110 VAL VAL A . n A 1 55 LYS 55 111 111 LYS LYS A . n A 1 56 THR 56 112 112 THR THR A . n A 1 57 VAL 57 113 113 VAL VAL A . n A 1 58 HIS 58 114 114 HIS HIS A . n A 1 59 THR 59 115 115 THR THR A . n A 1 60 ASP 60 116 116 ASP ASP A . n A 1 61 ASN 61 117 117 ASN ASN A . n A 1 62 GLY 62 118 118 GLY GLY A . n A 1 63 SER 63 119 119 SER SER A . n A 1 64 ASN 64 120 120 ASN ASN A . n A 1 65 PHE 65 121 121 PHE PHE A . n A 1 66 THR 66 122 122 THR THR A . n A 1 67 SER 67 123 123 SER SER A . n A 1 68 THR 68 124 124 THR THR A . n A 1 69 THR 69 125 125 THR THR A . n A 1 70 VAL 70 126 126 VAL VAL A . n A 1 71 LYS 71 127 127 LYS LYS A . n A 1 72 ALA 72 128 128 ALA ALA A . n A 1 73 ALA 73 129 129 ALA ALA A . n A 1 74 CAS 74 130 130 CAS CAS A . n A 1 75 TRP 75 131 131 TRP TRP A . n A 1 76 TRP 76 132 132 TRP TRP A . n A 1 77 ALA 77 133 133 ALA ALA A . n A 1 78 GLY 78 134 134 GLY GLY A . n A 1 79 ILE 79 135 135 ILE ILE A . n A 1 80 LYS 80 136 136 LYS LYS A . n A 1 81 GLN 81 137 137 GLN GLN A . n A 1 82 GLU 82 138 ? ? ? A . n A 1 83 PHE 83 139 ? ? ? A . n A 1 84 GLY 84 140 ? ? ? A . n A 1 85 ILE 85 141 ? ? ? A . n A 1 86 PRO 86 142 ? ? ? A . n A 1 87 TYR 87 143 ? ? ? A . n A 1 88 ASN 88 144 ? ? ? A . n A 1 89 PRO 89 145 ? ? ? A . n A 1 90 GLN 90 146 ? ? ? A . n A 1 91 SER 91 147 ? ? ? A . n A 1 92 GLN 92 148 ? ? ? A . n A 1 93 GLY 93 149 ? ? ? A . n A 1 94 VAL 94 150 ? ? ? A . n A 1 95 ILE 95 151 ? ? ? A . n A 1 96 GLU 96 152 ? ? ? A . n A 1 97 SER 97 153 ? ? ? A . n A 1 98 MET 98 154 154 MET MET A . n A 1 99 ASN 99 155 155 ASN ASN A . n A 1 100 LYS 100 156 156 LYS LYS A . n A 1 101 GLU 101 157 157 GLU GLU A . n A 1 102 LEU 102 158 158 LEU LEU A . n A 1 103 LYS 103 159 159 LYS LYS A . n A 1 104 LYS 104 160 160 LYS LYS A . n A 1 105 ILE 105 161 161 ILE ILE A . n A 1 106 ILE 106 162 162 ILE ILE A . n A 1 107 GLY 107 163 163 GLY GLY A . n A 1 108 GLN 108 164 164 GLN GLN A . n A 1 109 VAL 109 165 165 VAL VAL A . n A 1 110 ARG 110 166 166 ARG ARG A . n A 1 111 ASP 111 167 167 ASP ASP A . n A 1 112 GLN 112 168 168 GLN GLN A . n A 1 113 ALA 113 169 169 ALA ALA A . n A 1 114 GLU 114 170 170 GLU GLU A . n A 1 115 HIS 115 171 171 HIS HIS A . n A 1 116 LEU 116 172 172 LEU LEU A . n A 1 117 LYS 117 173 173 LYS LYS A . n A 1 118 THR 118 174 174 THR THR A . n A 1 119 ALA 119 175 175 ALA ALA A . n A 1 120 VAL 120 176 176 VAL VAL A . n A 1 121 GLN 121 177 177 GLN GLN A . n A 1 122 MET 122 178 178 MET MET A . n A 1 123 ALA 123 179 179 ALA ALA A . n A 1 124 VAL 124 180 180 VAL VAL A . n A 1 125 PHE 125 181 181 PHE PHE A . n A 1 126 ILE 126 182 182 ILE ILE A . n A 1 127 HIS 127 183 183 HIS HIS A . n A 1 128 ASN 128 184 184 ASN ASN A . n A 1 129 HIS 129 185 185 HIS HIS A . n A 1 130 LYS 130 186 186 LYS LYS A . n A 1 131 ARG 131 187 187 ARG ARG A . n A 1 132 LYS 132 188 188 LYS LYS A . n A 1 133 GLY 133 189 189 GLY GLY A . n A 1 134 GLY 134 190 190 GLY GLY A . n A 1 135 ILE 135 191 191 ILE ILE A . n A 1 136 GLY 136 192 192 GLY GLY A . n A 1 137 GLY 137 193 193 GLY GLY A . n A 1 138 TYR 138 194 194 TYR TYR A . n A 1 139 SER 139 195 195 SER SER A . n A 1 140 ALA 140 196 196 ALA ALA A . n A 1 141 GLY 141 197 197 GLY GLY A . n A 1 142 GLU 142 198 198 GLU GLU A . n A 1 143 ARG 143 199 199 ARG ARG A . n A 1 144 ILE 144 200 200 ILE ILE A . n A 1 145 VAL 145 201 201 VAL VAL A . n A 1 146 ASP 146 202 202 ASP ASP A . n A 1 147 ILE 147 203 203 ILE ILE A . n A 1 148 ILE 148 204 204 ILE ILE A . n A 1 149 ALA 149 205 205 ALA ALA A . n A 1 150 THR 150 206 206 THR THR A . n A 1 151 ASP 151 207 207 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 208 2 HOH HOH A . B 2 HOH 2 209 3 HOH HOH A . B 2 HOH 3 210 4 HOH HOH A . B 2 HOH 4 211 5 HOH HOH A . B 2 HOH 5 212 6 HOH HOH A . B 2 HOH 6 213 8 HOH HOH A . B 2 HOH 7 214 9 HOH HOH A . B 2 HOH 8 215 10 HOH HOH A . B 2 HOH 9 216 11 HOH HOH A . B 2 HOH 10 217 12 HOH HOH A . B 2 HOH 11 218 13 HOH HOH A . B 2 HOH 12 219 16 HOH HOH A . B 2 HOH 13 220 17 HOH HOH A . B 2 HOH 14 221 18 HOH HOH A . B 2 HOH 15 222 19 HOH HOH A . B 2 HOH 16 223 20 HOH HOH A . B 2 HOH 17 224 23 HOH HOH A . B 2 HOH 18 225 24 HOH HOH A . B 2 HOH 19 226 26 HOH HOH A . B 2 HOH 20 227 29 HOH HOH A . B 2 HOH 21 228 31 HOH HOH A . B 2 HOH 22 229 32 HOH HOH A . B 2 HOH 23 230 33 HOH HOH A . B 2 HOH 24 231 34 HOH HOH A . B 2 HOH 25 232 35 HOH HOH A . B 2 HOH 26 233 36 HOH HOH A . B 2 HOH 27 234 37 HOH HOH A . B 2 HOH 28 235 38 HOH HOH A . B 2 HOH 29 236 39 HOH HOH A . B 2 HOH 30 237 40 HOH HOH A . B 2 HOH 31 238 41 HOH HOH A . B 2 HOH 32 239 42 HOH HOH A . B 2 HOH 33 240 43 HOH HOH A . B 2 HOH 34 241 44 HOH HOH A . B 2 HOH 35 242 45 HOH HOH A . B 2 HOH 36 243 46 HOH HOH A . B 2 HOH 37 244 47 HOH HOH A . B 2 HOH 38 245 48 HOH HOH A . B 2 HOH 39 246 49 HOH HOH A . B 2 HOH 40 247 50 HOH HOH A . B 2 HOH 41 248 51 HOH HOH A . B 2 HOH 42 249 52 HOH HOH A . B 2 HOH 43 250 53 HOH HOH A . B 2 HOH 44 251 54 HOH HOH A . B 2 HOH 45 252 55 HOH HOH A . B 2 HOH 46 253 56 HOH HOH A . B 2 HOH 47 254 57 HOH HOH A . B 2 HOH 48 255 58 HOH HOH A . B 2 HOH 49 256 59 HOH HOH A . B 2 HOH 50 257 60 HOH HOH A . B 2 HOH 51 258 61 HOH HOH A . B 2 HOH 52 259 62 HOH HOH A . B 2 HOH 53 260 63 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CAS 9 A CAS 65 ? CYS 'S-(DIMETHYLARSENIC)CYSTEINE' 2 A CAS 74 A CAS 130 ? CYS 'S-(DIMETHYLARSENIC)CYSTEINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2500 ? 1 MORE -17 ? 1 'SSA (A^2)' 12980 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 21.9333333333 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-10-14 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-03 5 'Structure model' 1 4 2023-08-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.851 ? 1 X-PLOR refinement 3.851 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing 3.851 ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 209 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 258 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 188 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -57.97 _pdbx_validate_torsion.psi -9.27 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 71 ? CG ? A LYS 15 CG 2 1 Y 0 A LYS 71 ? CD ? A LYS 15 CD 3 1 Y 0 A LYS 71 ? CE ? A LYS 15 CE 4 1 Y 0 A LYS 71 ? NZ ? A LYS 15 NZ 5 1 Y 0 A GLN 95 ? CG ? A GLN 39 CG 6 1 Y 0 A GLN 95 ? CD ? A GLN 39 CD 7 1 Y 0 A GLN 95 ? OE1 ? A GLN 39 OE1 8 1 Y 0 A GLN 95 ? NE2 ? A GLN 39 NE2 9 1 Y 0 A LYS 111 ? CD ? A LYS 55 CD 10 1 Y 0 A LYS 111 ? CE ? A LYS 55 CE 11 1 Y 0 A LYS 111 ? NZ ? A LYS 55 NZ 12 1 Y 0 A ASN 155 ? CG ? A ASN 99 CG 13 1 Y 0 A ASN 155 ? OD1 ? A ASN 99 OD1 14 1 Y 0 A ASN 155 ? ND2 ? A ASN 99 ND2 15 1 Y 0 A LYS 156 ? CG ? A LYS 100 CG 16 1 Y 0 A LYS 156 ? CD ? A LYS 100 CD 17 1 Y 0 A LYS 156 ? CE ? A LYS 100 CE 18 1 Y 0 A LYS 156 ? NZ ? A LYS 100 NZ 19 1 Y 0 A GLU 170 ? CB ? A GLU 114 CB 20 1 Y 0 A GLU 170 ? CG ? A GLU 114 CG 21 1 Y 0 A GLU 170 ? CD ? A GLU 114 CD 22 1 Y 0 A GLU 170 ? OE1 ? A GLU 114 OE1 23 1 Y 0 A GLU 170 ? OE2 ? A GLU 114 OE2 24 1 Y 0 A LYS 186 ? CD ? A LYS 130 CD 25 1 Y 0 A LYS 186 ? CE ? A LYS 130 CE 26 1 Y 0 A LYS 186 ? NZ ? A LYS 130 NZ 27 1 Y 0 A ARG 187 ? CG ? A ARG 131 CG 28 1 Y 0 A ARG 187 ? CD ? A ARG 131 CD 29 1 Y 0 A ARG 187 ? NE ? A ARG 131 NE 30 1 Y 0 A ARG 187 ? CZ ? A ARG 131 CZ 31 1 Y 0 A ARG 187 ? NH1 ? A ARG 131 NH1 32 1 Y 0 A ARG 187 ? NH2 ? A ARG 131 NH2 33 1 Y 0 A LYS 188 ? CD ? A LYS 132 CD 34 1 Y 0 A LYS 188 ? CE ? A LYS 132 CE 35 1 Y 0 A LYS 188 ? NZ ? A LYS 132 NZ 36 1 Y 0 A TYR 194 ? CG ? A TYR 138 CG 37 1 Y 0 A TYR 194 ? CD1 ? A TYR 138 CD1 38 1 Y 0 A TYR 194 ? CD2 ? A TYR 138 CD2 39 1 Y 0 A TYR 194 ? CE1 ? A TYR 138 CE1 40 1 Y 0 A TYR 194 ? CE2 ? A TYR 138 CE2 41 1 Y 0 A TYR 194 ? CZ ? A TYR 138 CZ 42 1 Y 0 A TYR 194 ? OH ? A TYR 138 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 138 ? A GLU 82 2 1 Y 1 A PHE 139 ? A PHE 83 3 1 Y 1 A GLY 140 ? A GLY 84 4 1 Y 1 A ILE 141 ? A ILE 85 5 1 Y 1 A PRO 142 ? A PRO 86 6 1 Y 1 A TYR 143 ? A TYR 87 7 1 Y 1 A ASN 144 ? A ASN 88 8 1 Y 1 A PRO 145 ? A PRO 89 9 1 Y 1 A GLN 146 ? A GLN 90 10 1 Y 1 A SER 147 ? A SER 91 11 1 Y 1 A GLN 148 ? A GLN 92 12 1 Y 1 A GLY 149 ? A GLY 93 13 1 Y 1 A VAL 150 ? A VAL 94 14 1 Y 1 A ILE 151 ? A ILE 95 15 1 Y 1 A GLU 152 ? A GLU 96 16 1 Y 1 A SER 153 ? A SER 97 17 1 Y 0 A GLY 189 ? A GLY 133 18 1 Y 0 A GLY 190 ? A GLY 134 19 1 Y 0 A ILE 191 ? A ILE 135 20 1 Y 0 A GLY 192 ? A GLY 136 21 1 Y 0 A GLY 193 ? A GLY 137 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ITG _pdbx_initial_refinement_model.details 'PDB ENTRY 1ITG' #