data_1BJI # _entry.id 1BJI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BJI pdb_00001bji 10.2210/pdb1bji/pdb WWPDB D_1000171830 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-06-03 2 'Structure model' 1 1 2008-03-10 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2024-04-03 6 'Structure model' 2 2 2024-10-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' 13 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_branch_scheme 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_database_status 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' pdbx_struct_conn_angle 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' chem_comp_atom 21 5 'Structure model' chem_comp_bond 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_initial_refinement_model 24 6 'Structure model' pdbx_entry_details 25 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_asym_id' 2 4 'Structure model' '_atom_site.auth_seq_id' 3 4 'Structure model' '_atom_site.label_asym_id' 4 4 'Structure model' '_atom_site.label_entity_id' 5 4 'Structure model' '_atom_site.pdbx_PDB_ins_code' 6 4 'Structure model' '_chem_comp.name' 7 4 'Structure model' '_chem_comp.type' 8 4 'Structure model' '_entity.formula_weight' 9 4 'Structure model' '_entity.pdbx_description' 10 4 'Structure model' '_entity.pdbx_number_of_molecules' 11 4 'Structure model' '_entity.type' 12 4 'Structure model' '_pdbx_database_status.process_site' 13 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 4 'Structure model' '_struct_conn.pdbx_ptnr1_PDB_ins_code' 23 4 'Structure model' '_struct_conn.pdbx_ptnr2_PDB_ins_code' 24 4 'Structure model' '_struct_conn.pdbx_role' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 5 'Structure model' '_chem_comp.pdbx_synonyms' 32 5 'Structure model' '_database_2.pdbx_DOI' 33 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BJI _pdbx_database_status.recvd_initial_deposition_date 1997-12-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Varghese, J.N.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Dihydropyrancarboxamides related to zanamivir: a new series of inhibitors of influenza virus sialidases. 2. Crystallographic and molecular modeling study of complexes of 4-amino-4H-pyran-6-carboxamides and sialidase from influenza virus types A and B. ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 41 _citation.page_first 798 _citation.page_last 807 _citation.year 1998 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9526556 _citation.pdbx_database_id_DOI 10.1021/jm9703754 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Taylor, N.R.' 1 ? primary 'Cleasby, A.' 2 ? primary 'Singh, O.' 3 ? primary 'Skarzynski, T.' 4 ? primary 'Wonacott, A.J.' 5 ? primary 'Smith, P.W.' 6 ? primary 'Sollis, S.L.' 7 ? primary 'Howes, P.D.' 8 ? primary 'Cherry, P.C.' 9 ? primary 'Bethell, R.' 10 ? primary 'Colman, P.' 11 ? primary 'Varghese, J.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat NEURAMINIDASE 43723.770 1 3.2.1.18 ? 'RESIDUES 82 - 468' 'INTEGRAL MEMBRANE PROTEIN, MEMBRANE BOUND STALK CLEAVED BY PRONASE, RELEASING FULLY ACTIVE HEAD WITH RESIDUES 82 - 468' 2 branched man ;alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1072.964 1 ? ? ? ? 3 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 6 non-polymer syn '5-ACETYLAMINO-4-AMINO-6-(PHENETHYL-PROPYL-CARBAMOYL)-5,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID' 389.445 1 ? ? ? ? 7 water nat water 18.015 191 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name SIALIDASE # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL ; _entity_poly.pdbx_seq_one_letter_code_can ;RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 alpha-D-mannopyranose MAN 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'CALCIUM ION' CA 6 '5-ACETYLAMINO-4-AMINO-6-(PHENETHYL-PROPYL-CARBAMOYL)-5,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID' DPC 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ASP n 1 3 PHE n 1 4 ASN n 1 5 ASN n 1 6 LEU n 1 7 THR n 1 8 LYS n 1 9 GLY n 1 10 LEU n 1 11 CYS n 1 12 THR n 1 13 ILE n 1 14 ASN n 1 15 SER n 1 16 TRP n 1 17 HIS n 1 18 ILE n 1 19 TYR n 1 20 GLY n 1 21 LYS n 1 22 ASP n 1 23 ASN n 1 24 ALA n 1 25 VAL n 1 26 ARG n 1 27 ILE n 1 28 GLY n 1 29 GLU n 1 30 ASP n 1 31 SER n 1 32 ASP n 1 33 VAL n 1 34 LEU n 1 35 VAL n 1 36 THR n 1 37 ARG n 1 38 GLU n 1 39 PRO n 1 40 TYR n 1 41 VAL n 1 42 SER n 1 43 CYS n 1 44 ASP n 1 45 PRO n 1 46 ASP n 1 47 GLU n 1 48 CYS n 1 49 ARG n 1 50 PHE n 1 51 TYR n 1 52 ALA n 1 53 LEU n 1 54 SER n 1 55 GLN n 1 56 GLY n 1 57 THR n 1 58 THR n 1 59 ILE n 1 60 ARG n 1 61 GLY n 1 62 LYS n 1 63 HIS n 1 64 SER n 1 65 ASN n 1 66 GLY n 1 67 THR n 1 68 ILE n 1 69 HIS n 1 70 ASP n 1 71 ARG n 1 72 SER n 1 73 GLN n 1 74 TYR n 1 75 ARG n 1 76 ALA n 1 77 LEU n 1 78 ILE n 1 79 SER n 1 80 TRP n 1 81 PRO n 1 82 LEU n 1 83 SER n 1 84 SER n 1 85 PRO n 1 86 PRO n 1 87 THR n 1 88 VAL n 1 89 TYR n 1 90 ASN n 1 91 SER n 1 92 ARG n 1 93 VAL n 1 94 GLU n 1 95 CYS n 1 96 ILE n 1 97 GLY n 1 98 TRP n 1 99 SER n 1 100 SER n 1 101 THR n 1 102 SER n 1 103 CYS n 1 104 HIS n 1 105 ASP n 1 106 GLY n 1 107 LYS n 1 108 THR n 1 109 ARG n 1 110 MET n 1 111 SER n 1 112 ILE n 1 113 CYS n 1 114 ILE n 1 115 SER n 1 116 GLY n 1 117 PRO n 1 118 ASN n 1 119 ASN n 1 120 ASN n 1 121 ALA n 1 122 SER n 1 123 ALA n 1 124 VAL n 1 125 ILE n 1 126 TRP n 1 127 TYR n 1 128 ASN n 1 129 ARG n 1 130 ARG n 1 131 PRO n 1 132 VAL n 1 133 THR n 1 134 GLU n 1 135 ILE n 1 136 ASN n 1 137 THR n 1 138 TRP n 1 139 ALA n 1 140 ARG n 1 141 ASN n 1 142 ILE n 1 143 LEU n 1 144 ARG n 1 145 THR n 1 146 GLN n 1 147 GLU n 1 148 SER n 1 149 GLU n 1 150 CYS n 1 151 VAL n 1 152 CYS n 1 153 HIS n 1 154 ASN n 1 155 GLY n 1 156 VAL n 1 157 CYS n 1 158 PRO n 1 159 VAL n 1 160 VAL n 1 161 PHE n 1 162 THR n 1 163 ASP n 1 164 GLY n 1 165 SER n 1 166 ALA n 1 167 THR n 1 168 GLY n 1 169 PRO n 1 170 ALA n 1 171 GLU n 1 172 THR n 1 173 ARG n 1 174 ILE n 1 175 TYR n 1 176 TYR n 1 177 PHE n 1 178 LYS n 1 179 GLU n 1 180 GLY n 1 181 LYS n 1 182 ILE n 1 183 LEU n 1 184 LYS n 1 185 TRP n 1 186 GLU n 1 187 PRO n 1 188 LEU n 1 189 ALA n 1 190 GLY n 1 191 THR n 1 192 ALA n 1 193 LYS n 1 194 HIS n 1 195 ILE n 1 196 GLU n 1 197 GLU n 1 198 CYS n 1 199 SER n 1 200 CYS n 1 201 TYR n 1 202 GLY n 1 203 GLU n 1 204 ARG n 1 205 ALA n 1 206 GLU n 1 207 ILE n 1 208 THR n 1 209 CYS n 1 210 THR n 1 211 CYS n 1 212 ARG n 1 213 ASP n 1 214 ASN n 1 215 TRP n 1 216 GLN n 1 217 GLY n 1 218 SER n 1 219 ASN n 1 220 ARG n 1 221 PRO n 1 222 VAL n 1 223 ILE n 1 224 ARG n 1 225 ILE n 1 226 ASP n 1 227 PRO n 1 228 VAL n 1 229 ALA n 1 230 MET n 1 231 THR n 1 232 HIS n 1 233 THR n 1 234 SER n 1 235 GLN n 1 236 TYR n 1 237 ILE n 1 238 CYS n 1 239 SER n 1 240 PRO n 1 241 VAL n 1 242 LEU n 1 243 THR n 1 244 ASP n 1 245 ASN n 1 246 PRO n 1 247 ARG n 1 248 PRO n 1 249 ASN n 1 250 ASP n 1 251 PRO n 1 252 THR n 1 253 VAL n 1 254 GLY n 1 255 LYS n 1 256 CYS n 1 257 ASN n 1 258 ASP n 1 259 PRO n 1 260 TYR n 1 261 PRO n 1 262 GLY n 1 263 ASN n 1 264 ASN n 1 265 ASN n 1 266 ASN n 1 267 GLY n 1 268 VAL n 1 269 LYS n 1 270 GLY n 1 271 PHE n 1 272 SER n 1 273 TYR n 1 274 LEU n 1 275 ASP n 1 276 GLY n 1 277 VAL n 1 278 ASN n 1 279 THR n 1 280 TRP n 1 281 LEU n 1 282 GLY n 1 283 ARG n 1 284 THR n 1 285 ILE n 1 286 SER n 1 287 ILE n 1 288 ALA n 1 289 SER n 1 290 ARG n 1 291 SER n 1 292 GLY n 1 293 TYR n 1 294 GLU n 1 295 MET n 1 296 LEU n 1 297 LYS n 1 298 VAL n 1 299 PRO n 1 300 ASN n 1 301 ALA n 1 302 LEU n 1 303 THR n 1 304 ASP n 1 305 ASP n 1 306 LYS n 1 307 SER n 1 308 LYS n 1 309 PRO n 1 310 THR n 1 311 GLN n 1 312 GLY n 1 313 GLN n 1 314 THR n 1 315 ILE n 1 316 VAL n 1 317 LEU n 1 318 ASN n 1 319 THR n 1 320 ASP n 1 321 TRP n 1 322 SER n 1 323 GLY n 1 324 TYR n 1 325 SER n 1 326 GLY n 1 327 SER n 1 328 PHE n 1 329 MET n 1 330 ASP n 1 331 TYR n 1 332 TRP n 1 333 ALA n 1 334 GLU n 1 335 GLY n 1 336 GLU n 1 337 CYS n 1 338 TYR n 1 339 ARG n 1 340 ALA n 1 341 CYS n 1 342 PHE n 1 343 TYR n 1 344 VAL n 1 345 GLU n 1 346 LEU n 1 347 ILE n 1 348 ARG n 1 349 GLY n 1 350 ARG n 1 351 PRO n 1 352 LYS n 1 353 GLU n 1 354 ASP n 1 355 LYS n 1 356 VAL n 1 357 TRP n 1 358 TRP n 1 359 THR n 1 360 SER n 1 361 ASN n 1 362 SER n 1 363 ILE n 1 364 VAL n 1 365 SER n 1 366 MET n 1 367 CYS n 1 368 SER n 1 369 SER n 1 370 THR n 1 371 GLU n 1 372 PHE n 1 373 LEU n 1 374 GLY n 1 375 GLN n 1 376 TRP n 1 377 ASP n 1 378 TRP n 1 379 PRO n 1 380 ASP n 1 381 GLY n 1 382 ALA n 1 383 LYS n 1 384 ILE n 1 385 GLU n 1 386 TYR n 1 387 PHE n 1 388 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Influenza A virus' _entity_src_nat.pdbx_ncbi_taxonomy_id 11320 _entity_src_nat.genus 'Influenzavirus A' _entity_src_nat.species ? _entity_src_nat.strain A/TERN/AUSTRALIA/G70C/75 _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'DETERGENT RELEASED, PRONASE DIGESTED' # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-2DManpa1-2DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3/a4-b1_b4-c1_c3-d1_d2-e1_e2-f1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 4 MAN O2 HO2 sing ? 5 2 6 MAN C1 O1 5 MAN O2 HO2 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPC L-saccharide . '5-ACETYLAMINO-4-AMINO-6-(PHENETHYL-PROPYL-CARBAMOYL)-5,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID' ? 'C20 H27 N3 O5' 389.445 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 82 82 ARG ARG A . n A 1 2 ASP 2 83 83 ASP ASP A . n A 1 3 PHE 3 84 84 PHE PHE A . n A 1 4 ASN 4 85 85 ASN ASN A . n A 1 5 ASN 5 86 86 ASN ASN A . n A 1 6 LEU 6 87 87 LEU LEU A . n A 1 7 THR 7 88 88 THR THR A . n A 1 8 LYS 8 89 89 LYS LYS A . n A 1 9 GLY 9 90 90 GLY GLY A . n A 1 10 LEU 10 91 91 LEU LEU A . n A 1 11 CYS 11 92 92 CYS CYS A . n A 1 12 THR 12 93 93 THR THR A . n A 1 13 ILE 13 94 94 ILE ILE A . n A 1 14 ASN 14 95 95 ASN ASN A . n A 1 15 SER 15 96 96 SER SER A . n A 1 16 TRP 16 97 97 TRP TRP A . n A 1 17 HIS 17 98 98 HIS HIS A . n A 1 18 ILE 18 99 99 ILE ILE A . n A 1 19 TYR 19 100 100 TYR TYR A . n A 1 20 GLY 20 101 101 GLY GLY A . n A 1 21 LYS 21 102 102 LYS LYS A . n A 1 22 ASP 22 103 103 ASP ASP A . n A 1 23 ASN 23 104 104 ASN ASN A . n A 1 24 ALA 24 105 105 ALA ALA A . n A 1 25 VAL 25 106 106 VAL VAL A . n A 1 26 ARG 26 107 107 ARG ARG A . n A 1 27 ILE 27 108 108 ILE ILE A . n A 1 28 GLY 28 109 109 GLY GLY A . n A 1 29 GLU 29 110 110 GLU GLU A . n A 1 30 ASP 30 111 111 ASP ASP A . n A 1 31 SER 31 112 112 SER SER A . n A 1 32 ASP 32 113 113 ASP ASP A . n A 1 33 VAL 33 114 114 VAL VAL A . n A 1 34 LEU 34 115 115 LEU LEU A . n A 1 35 VAL 35 116 116 VAL VAL A . n A 1 36 THR 36 117 117 THR THR A . n A 1 37 ARG 37 118 118 ARG ARG A . n A 1 38 GLU 38 119 119 GLU GLU A . n A 1 39 PRO 39 120 120 PRO PRO A . n A 1 40 TYR 40 121 121 TYR TYR A . n A 1 41 VAL 41 122 122 VAL VAL A . n A 1 42 SER 42 123 123 SER SER A . n A 1 43 CYS 43 124 124 CYS CYS A . n A 1 44 ASP 44 125 125 ASP ASP A . n A 1 45 PRO 45 126 126 PRO PRO A . n A 1 46 ASP 46 127 127 ASP ASP A . n A 1 47 GLU 47 128 128 GLU GLU A . n A 1 48 CYS 48 129 129 CYS CYS A . n A 1 49 ARG 49 130 130 ARG ARG A . n A 1 50 PHE 50 131 131 PHE PHE A . n A 1 51 TYR 51 132 132 TYR TYR A . n A 1 52 ALA 52 133 133 ALA ALA A . n A 1 53 LEU 53 134 134 LEU LEU A . n A 1 54 SER 54 135 135 SER SER A . n A 1 55 GLN 55 136 136 GLN GLN A . n A 1 56 GLY 56 137 137 GLY GLY A . n A 1 57 THR 57 138 138 THR THR A . n A 1 58 THR 58 139 139 THR THR A . n A 1 59 ILE 59 140 140 ILE ILE A . n A 1 60 ARG 60 141 141 ARG ARG A . n A 1 61 GLY 61 142 142 GLY GLY A . n A 1 62 LYS 62 143 143 LYS LYS A . n A 1 63 HIS 63 144 144 HIS HIS A . n A 1 64 SER 64 145 145 SER SER A . n A 1 65 ASN 65 146 146 ASN ASN A . n A 1 66 GLY 66 147 147 GLY GLY A . n A 1 67 THR 67 148 148 THR THR A . n A 1 68 ILE 68 149 149 ILE ILE A . n A 1 69 HIS 69 150 150 HIS HIS A . n A 1 70 ASP 70 151 151 ASP ASP A . n A 1 71 ARG 71 152 152 ARG ARG A . n A 1 72 SER 72 153 153 SER SER A . n A 1 73 GLN 73 154 154 GLN GLN A . n A 1 74 TYR 74 155 155 TYR TYR A . n A 1 75 ARG 75 156 156 ARG ARG A . n A 1 76 ALA 76 157 157 ALA ALA A . n A 1 77 LEU 77 158 158 LEU LEU A . n A 1 78 ILE 78 159 159 ILE ILE A . n A 1 79 SER 79 160 160 SER SER A . n A 1 80 TRP 80 161 161 TRP TRP A . n A 1 81 PRO 81 162 162 PRO PRO A . n A 1 82 LEU 82 163 163 LEU LEU A . n A 1 83 SER 83 164 164 SER SER A . n A 1 84 SER 84 165 165 SER SER A . n A 1 85 PRO 85 166 166 PRO PRO A . n A 1 86 PRO 86 167 167 PRO PRO A . n A 1 87 THR 87 168 168 THR THR A . n A 1 88 VAL 88 169 169 VAL VAL A . n A 1 89 TYR 89 169 169 TYR TYR A A n A 1 90 ASN 90 170 170 ASN ASN A . n A 1 91 SER 91 171 171 SER SER A . n A 1 92 ARG 92 172 172 ARG ARG A . n A 1 93 VAL 93 173 173 VAL VAL A . n A 1 94 GLU 94 174 174 GLU GLU A . n A 1 95 CYS 95 175 175 CYS CYS A . n A 1 96 ILE 96 176 176 ILE ILE A . n A 1 97 GLY 97 177 177 GLY GLY A . n A 1 98 TRP 98 178 178 TRP TRP A . n A 1 99 SER 99 179 179 SER SER A . n A 1 100 SER 100 180 180 SER SER A . n A 1 101 THR 101 181 181 THR THR A . n A 1 102 SER 102 182 182 SER SER A . n A 1 103 CYS 103 183 183 CYS CYS A . n A 1 104 HIS 104 184 184 HIS HIS A . n A 1 105 ASP 105 185 185 ASP ASP A . n A 1 106 GLY 106 186 186 GLY GLY A . n A 1 107 LYS 107 187 187 LYS LYS A . n A 1 108 THR 108 188 188 THR THR A . n A 1 109 ARG 109 189 189 ARG ARG A . n A 1 110 MET 110 190 190 MET MET A . n A 1 111 SER 111 191 191 SER SER A . n A 1 112 ILE 112 192 192 ILE ILE A . n A 1 113 CYS 113 193 193 CYS CYS A . n A 1 114 ILE 114 194 194 ILE ILE A . n A 1 115 SER 115 195 195 SER SER A . n A 1 116 GLY 116 196 196 GLY GLY A . n A 1 117 PRO 117 197 197 PRO PRO A . n A 1 118 ASN 118 198 198 ASN ASN A . n A 1 119 ASN 119 199 199 ASN ASN A . n A 1 120 ASN 120 200 200 ASN ASN A . n A 1 121 ALA 121 201 201 ALA ALA A . n A 1 122 SER 122 202 202 SER SER A . n A 1 123 ALA 123 203 203 ALA ALA A . n A 1 124 VAL 124 204 204 VAL VAL A . n A 1 125 ILE 125 205 205 ILE ILE A . n A 1 126 TRP 126 206 206 TRP TRP A . n A 1 127 TYR 127 207 207 TYR TYR A . n A 1 128 ASN 128 208 208 ASN ASN A . n A 1 129 ARG 129 209 209 ARG ARG A . n A 1 130 ARG 130 210 210 ARG ARG A . n A 1 131 PRO 131 211 211 PRO PRO A . n A 1 132 VAL 132 212 212 VAL VAL A . n A 1 133 THR 133 213 213 THR THR A . n A 1 134 GLU 134 214 214 GLU GLU A . n A 1 135 ILE 135 215 215 ILE ILE A . n A 1 136 ASN 136 216 216 ASN ASN A . n A 1 137 THR 137 217 217 THR THR A . n A 1 138 TRP 138 218 218 TRP TRP A . n A 1 139 ALA 139 219 219 ALA ALA A . n A 1 140 ARG 140 220 220 ARG ARG A . n A 1 141 ASN 141 221 221 ASN ASN A . n A 1 142 ILE 142 222 222 ILE ILE A . n A 1 143 LEU 143 223 223 LEU LEU A . n A 1 144 ARG 144 224 224 ARG ARG A . n A 1 145 THR 145 225 225 THR THR A . n A 1 146 GLN 146 226 226 GLN GLN A . n A 1 147 GLU 147 227 227 GLU GLU A . n A 1 148 SER 148 228 228 SER SER A . n A 1 149 GLU 149 229 229 GLU GLU A . n A 1 150 CYS 150 230 230 CYS CYS A . n A 1 151 VAL 151 231 231 VAL VAL A . n A 1 152 CYS 152 232 232 CYS CYS A . n A 1 153 HIS 153 233 233 HIS HIS A . n A 1 154 ASN 154 234 234 ASN ASN A . n A 1 155 GLY 155 235 235 GLY GLY A . n A 1 156 VAL 156 236 236 VAL VAL A . n A 1 157 CYS 157 237 237 CYS CYS A . n A 1 158 PRO 158 238 238 PRO PRO A . n A 1 159 VAL 159 239 239 VAL VAL A . n A 1 160 VAL 160 240 240 VAL VAL A . n A 1 161 PHE 161 241 241 PHE PHE A . n A 1 162 THR 162 242 242 THR THR A . n A 1 163 ASP 163 243 243 ASP ASP A . n A 1 164 GLY 164 244 244 GLY GLY A . n A 1 165 SER 165 245 245 SER SER A . n A 1 166 ALA 166 246 246 ALA ALA A . n A 1 167 THR 167 247 247 THR THR A . n A 1 168 GLY 168 248 248 GLY GLY A . n A 1 169 PRO 169 249 249 PRO PRO A . n A 1 170 ALA 170 250 250 ALA ALA A . n A 1 171 GLU 171 251 251 GLU GLU A . n A 1 172 THR 172 252 252 THR THR A . n A 1 173 ARG 173 253 253 ARG ARG A . n A 1 174 ILE 174 254 254 ILE ILE A . n A 1 175 TYR 175 255 255 TYR TYR A . n A 1 176 TYR 176 256 256 TYR TYR A . n A 1 177 PHE 177 257 257 PHE PHE A . n A 1 178 LYS 178 258 258 LYS LYS A . n A 1 179 GLU 179 259 259 GLU GLU A . n A 1 180 GLY 180 260 260 GLY GLY A . n A 1 181 LYS 181 261 261 LYS LYS A . n A 1 182 ILE 182 262 262 ILE ILE A . n A 1 183 LEU 183 263 263 LEU LEU A . n A 1 184 LYS 184 264 264 LYS LYS A . n A 1 185 TRP 185 265 265 TRP TRP A . n A 1 186 GLU 186 266 266 GLU GLU A . n A 1 187 PRO 187 267 267 PRO PRO A . n A 1 188 LEU 188 268 268 LEU LEU A . n A 1 189 ALA 189 269 269 ALA ALA A . n A 1 190 GLY 190 270 270 GLY GLY A . n A 1 191 THR 191 271 271 THR THR A . n A 1 192 ALA 192 272 272 ALA ALA A . n A 1 193 LYS 193 273 273 LYS LYS A . n A 1 194 HIS 194 274 274 HIS HIS A . n A 1 195 ILE 195 275 275 ILE ILE A . n A 1 196 GLU 196 276 276 GLU GLU A . n A 1 197 GLU 197 277 277 GLU GLU A . n A 1 198 CYS 198 278 278 CYS CYS A . n A 1 199 SER 199 279 279 SER SER A . n A 1 200 CYS 200 280 280 CYS CYS A . n A 1 201 TYR 201 281 281 TYR TYR A . n A 1 202 GLY 202 282 282 GLY GLY A . n A 1 203 GLU 203 283 283 GLU GLU A . n A 1 204 ARG 204 284 284 ARG ARG A . n A 1 205 ALA 205 285 285 ALA ALA A . n A 1 206 GLU 206 286 286 GLU GLU A . n A 1 207 ILE 207 287 287 ILE ILE A . n A 1 208 THR 208 288 288 THR THR A . n A 1 209 CYS 209 289 289 CYS CYS A . n A 1 210 THR 210 290 290 THR THR A . n A 1 211 CYS 211 291 291 CYS CYS A . n A 1 212 ARG 212 292 292 ARG ARG A . n A 1 213 ASP 213 293 293 ASP ASP A . n A 1 214 ASN 214 294 294 ASN ASN A . n A 1 215 TRP 215 295 295 TRP TRP A . n A 1 216 GLN 216 296 296 GLN GLN A . n A 1 217 GLY 217 297 297 GLY GLY A . n A 1 218 SER 218 298 298 SER SER A . n A 1 219 ASN 219 299 299 ASN ASN A . n A 1 220 ARG 220 300 300 ARG ARG A . n A 1 221 PRO 221 301 301 PRO PRO A . n A 1 222 VAL 222 302 302 VAL VAL A . n A 1 223 ILE 223 303 303 ILE ILE A . n A 1 224 ARG 224 304 304 ARG ARG A . n A 1 225 ILE 225 305 305 ILE ILE A . n A 1 226 ASP 226 306 306 ASP ASP A . n A 1 227 PRO 227 307 307 PRO PRO A . n A 1 228 VAL 228 308 308 VAL VAL A . n A 1 229 ALA 229 309 309 ALA ALA A . n A 1 230 MET 230 310 310 MET MET A . n A 1 231 THR 231 311 311 THR THR A . n A 1 232 HIS 232 312 312 HIS HIS A . n A 1 233 THR 233 313 313 THR THR A . n A 1 234 SER 234 314 314 SER SER A . n A 1 235 GLN 235 315 315 GLN GLN A . n A 1 236 TYR 236 316 316 TYR TYR A . n A 1 237 ILE 237 317 317 ILE ILE A . n A 1 238 CYS 238 318 318 CYS CYS A . n A 1 239 SER 239 319 319 SER SER A . n A 1 240 PRO 240 320 320 PRO PRO A . n A 1 241 VAL 241 321 321 VAL VAL A . n A 1 242 LEU 242 322 322 LEU LEU A . n A 1 243 THR 243 323 323 THR THR A . n A 1 244 ASP 244 324 324 ASP ASP A . n A 1 245 ASN 245 325 325 ASN ASN A . n A 1 246 PRO 246 326 326 PRO PRO A . n A 1 247 ARG 247 327 327 ARG ARG A . n A 1 248 PRO 248 328 328 PRO PRO A . n A 1 249 ASN 249 329 329 ASN ASN A . n A 1 250 ASP 250 330 330 ASP ASP A . n A 1 251 PRO 251 331 331 PRO PRO A . n A 1 252 THR 252 332 332 THR THR A . n A 1 253 VAL 253 333 333 VAL VAL A . n A 1 254 GLY 254 335 335 GLY GLY A . n A 1 255 LYS 255 336 336 LYS LYS A . n A 1 256 CYS 256 337 337 CYS CYS A . n A 1 257 ASN 257 338 338 ASN ASN A . n A 1 258 ASP 258 339 339 ASP ASP A . n A 1 259 PRO 259 340 340 PRO PRO A . n A 1 260 TYR 260 341 341 TYR TYR A . n A 1 261 PRO 261 342 342 PRO PRO A . n A 1 262 GLY 262 343 343 GLY GLY A . n A 1 263 ASN 263 344 344 ASN ASN A . n A 1 264 ASN 264 345 345 ASN ASN A . n A 1 265 ASN 265 346 346 ASN ASN A . n A 1 266 ASN 266 347 347 ASN ASN A . n A 1 267 GLY 267 348 348 GLY GLY A . n A 1 268 VAL 268 349 349 VAL VAL A . n A 1 269 LYS 269 350 350 LYS LYS A . n A 1 270 GLY 270 351 351 GLY GLY A . n A 1 271 PHE 271 352 352 PHE PHE A . n A 1 272 SER 272 353 353 SER SER A . n A 1 273 TYR 273 354 354 TYR TYR A . n A 1 274 LEU 274 355 355 LEU LEU A . n A 1 275 ASP 275 356 356 ASP ASP A . n A 1 276 GLY 276 357 357 GLY GLY A . n A 1 277 VAL 277 358 358 VAL VAL A . n A 1 278 ASN 278 359 359 ASN ASN A . n A 1 279 THR 279 360 360 THR THR A . n A 1 280 TRP 280 361 361 TRP TRP A . n A 1 281 LEU 281 362 362 LEU LEU A . n A 1 282 GLY 282 363 363 GLY GLY A . n A 1 283 ARG 283 364 364 ARG ARG A . n A 1 284 THR 284 365 365 THR THR A . n A 1 285 ILE 285 366 366 ILE ILE A . n A 1 286 SER 286 367 367 SER SER A . n A 1 287 ILE 287 368 368 ILE ILE A . n A 1 288 ALA 288 369 369 ALA ALA A . n A 1 289 SER 289 370 370 SER SER A . n A 1 290 ARG 290 371 371 ARG ARG A . n A 1 291 SER 291 372 372 SER SER A . n A 1 292 GLY 292 373 373 GLY GLY A . n A 1 293 TYR 293 374 374 TYR TYR A . n A 1 294 GLU 294 375 375 GLU GLU A . n A 1 295 MET 295 376 376 MET MET A . n A 1 296 LEU 296 377 377 LEU LEU A . n A 1 297 LYS 297 378 378 LYS LYS A . n A 1 298 VAL 298 379 379 VAL VAL A . n A 1 299 PRO 299 380 380 PRO PRO A . n A 1 300 ASN 300 381 381 ASN ASN A . n A 1 301 ALA 301 382 382 ALA ALA A . n A 1 302 LEU 302 383 383 LEU LEU A . n A 1 303 THR 303 384 384 THR THR A . n A 1 304 ASP 304 385 385 ASP ASP A . n A 1 305 ASP 305 386 386 ASP ASP A . n A 1 306 LYS 306 387 387 LYS LYS A . n A 1 307 SER 307 388 388 SER SER A . n A 1 308 LYS 308 389 389 LYS LYS A . n A 1 309 PRO 309 390 390 PRO PRO A . n A 1 310 THR 310 391 391 THR THR A . n A 1 311 GLN 311 392 392 GLN GLN A . n A 1 312 GLY 312 394 394 GLY GLY A . n A 1 313 GLN 313 395 395 GLN GLN A . n A 1 314 THR 314 396 396 THR THR A . n A 1 315 ILE 315 397 397 ILE ILE A . n A 1 316 VAL 316 398 398 VAL VAL A . n A 1 317 LEU 317 399 399 LEU LEU A . n A 1 318 ASN 318 400 400 ASN ASN A . n A 1 319 THR 319 401 401 THR THR A . n A 1 320 ASP 320 402 402 ASP ASP A . n A 1 321 TRP 321 403 403 TRP TRP A . n A 1 322 SER 322 404 404 SER SER A . n A 1 323 GLY 323 405 405 GLY GLY A . n A 1 324 TYR 324 406 406 TYR TYR A . n A 1 325 SER 325 407 407 SER SER A . n A 1 326 GLY 326 408 408 GLY GLY A . n A 1 327 SER 327 409 409 SER SER A . n A 1 328 PHE 328 410 410 PHE PHE A . n A 1 329 MET 329 411 411 MET MET A . n A 1 330 ASP 330 412 412 ASP ASP A . n A 1 331 TYR 331 412 412 TYR TYR A A n A 1 332 TRP 332 412 412 TRP TRP A B n A 1 333 ALA 333 413 413 ALA ALA A . n A 1 334 GLU 334 414 414 GLU GLU A . n A 1 335 GLY 335 415 415 GLY GLY A . n A 1 336 GLU 336 416 416 GLU GLU A . n A 1 337 CYS 337 417 417 CYS CYS A . n A 1 338 TYR 338 418 418 TYR TYR A . n A 1 339 ARG 339 419 419 ARG ARG A . n A 1 340 ALA 340 420 420 ALA ALA A . n A 1 341 CYS 341 421 421 CYS CYS A . n A 1 342 PHE 342 422 422 PHE PHE A . n A 1 343 TYR 343 423 423 TYR TYR A . n A 1 344 VAL 344 424 424 VAL VAL A . n A 1 345 GLU 345 425 425 GLU GLU A . n A 1 346 LEU 346 426 426 LEU LEU A . n A 1 347 ILE 347 427 427 ILE ILE A . n A 1 348 ARG 348 428 428 ARG ARG A . n A 1 349 GLY 349 429 429 GLY GLY A . n A 1 350 ARG 350 430 430 ARG ARG A . n A 1 351 PRO 351 431 431 PRO PRO A . n A 1 352 LYS 352 432 432 LYS LYS A . n A 1 353 GLU 353 433 433 GLU GLU A . n A 1 354 ASP 354 434 434 ASP ASP A . n A 1 355 LYS 355 435 435 LYS LYS A . n A 1 356 VAL 356 436 436 VAL VAL A . n A 1 357 TRP 357 437 437 TRP TRP A . n A 1 358 TRP 358 438 438 TRP TRP A . n A 1 359 THR 359 439 439 THR THR A . n A 1 360 SER 360 440 440 SER SER A . n A 1 361 ASN 361 441 441 ASN ASN A . n A 1 362 SER 362 442 442 SER SER A . n A 1 363 ILE 363 443 443 ILE ILE A . n A 1 364 VAL 364 444 444 VAL VAL A . n A 1 365 SER 365 445 445 SER SER A . n A 1 366 MET 366 446 446 MET MET A . n A 1 367 CYS 367 447 447 CYS CYS A . n A 1 368 SER 368 448 448 SER SER A . n A 1 369 SER 369 449 449 SER SER A . n A 1 370 THR 370 450 450 THR THR A . n A 1 371 GLU 371 451 451 GLU GLU A . n A 1 372 PHE 372 452 452 PHE PHE A . n A 1 373 LEU 373 453 453 LEU LEU A . n A 1 374 GLY 374 454 454 GLY GLY A . n A 1 375 GLN 375 455 455 GLN GLN A . n A 1 376 TRP 376 456 456 TRP TRP A . n A 1 377 ASP 377 457 457 ASP ASP A . n A 1 378 TRP 378 458 458 TRP TRP A . n A 1 379 PRO 379 459 459 PRO PRO A . n A 1 380 ASP 380 460 460 ASP ASP A . n A 1 381 GLY 381 461 461 GLY GLY A . n A 1 382 ALA 382 462 462 ALA ALA A . n A 1 383 LYS 383 463 463 LYS LYS A . n A 1 384 ILE 384 464 464 ILE ILE A . n A 1 385 GLU 385 465 465 GLU GLU A . n A 1 386 TYR 386 466 466 TYR TYR A . n A 1 387 PHE 387 467 467 PHE PHE A . n A 1 388 LEU 388 468 468 LEU LEU A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 ? NAG 200 n B 2 NAG 2 B NAG 2 ? NAG 200 n B 2 BMA 3 B BMA 3 ? MAN 200 n B 2 MAN 4 B MAN 4 ? MAN 200 n B 2 MAN 5 B MAN 5 ? MAN 200 n B 2 MAN 6 B MAN 6 ? MAN 200 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MAN 1 475 200 MAN MAN A G D 4 NAG 1 476 86 NAG NAG A A E 4 NAG 1 477 146 NAG NAG A A F 5 CA 1 478 150 CA CA A . G 6 DPC 1 479 217 DPC G21 A G H 7 HOH 1 480 1 HOH HOH A . H 7 HOH 2 481 2 HOH HOH A . H 7 HOH 3 482 3 HOH HOH A . H 7 HOH 4 483 4 HOH HOH A . H 7 HOH 5 484 5 HOH HOH A . H 7 HOH 6 485 6 HOH HOH A . H 7 HOH 7 486 7 HOH HOH A . H 7 HOH 8 487 9 HOH HOH A . H 7 HOH 9 488 11 HOH HOH A . H 7 HOH 10 489 12 HOH HOH A . H 7 HOH 11 490 13 HOH HOH A . H 7 HOH 12 491 14 HOH HOH A . H 7 HOH 13 492 15 HOH HOH A . H 7 HOH 14 493 17 HOH HOH A . H 7 HOH 15 494 18 HOH HOH A . H 7 HOH 16 495 19 HOH HOH A . H 7 HOH 17 496 21 HOH HOH A . H 7 HOH 18 497 24 HOH HOH A . H 7 HOH 19 498 26 HOH HOH A . H 7 HOH 20 499 27 HOH HOH A . H 7 HOH 21 500 28 HOH HOH A . H 7 HOH 22 501 29 HOH HOH A . H 7 HOH 23 502 30 HOH HOH A . H 7 HOH 24 503 31 HOH HOH A . H 7 HOH 25 504 32 HOH HOH A . H 7 HOH 26 505 35 HOH HOH A . H 7 HOH 27 506 36 HOH HOH A . H 7 HOH 28 507 37 HOH HOH A . H 7 HOH 29 508 41 HOH HOH A . H 7 HOH 30 509 43 HOH HOH A . H 7 HOH 31 510 45 HOH HOH A . H 7 HOH 32 511 47 HOH HOH A . H 7 HOH 33 512 48 HOH HOH A . H 7 HOH 34 513 49 HOH HOH A . H 7 HOH 35 514 50 HOH HOH A . H 7 HOH 36 515 51 HOH HOH A . H 7 HOH 37 516 53 HOH HOH A . H 7 HOH 38 517 54 HOH HOH A . H 7 HOH 39 518 55 HOH HOH A . H 7 HOH 40 519 56 HOH HOH A . H 7 HOH 41 520 58 HOH HOH A . H 7 HOH 42 521 59 HOH HOH A . H 7 HOH 43 522 60 HOH HOH A . H 7 HOH 44 523 61 HOH HOH A . H 7 HOH 45 524 62 HOH HOH A . H 7 HOH 46 525 63 HOH HOH A . H 7 HOH 47 526 64 HOH HOH A . H 7 HOH 48 527 66 HOH HOH A . H 7 HOH 49 528 67 HOH HOH A . H 7 HOH 50 529 68 HOH HOH A . H 7 HOH 51 530 69 HOH HOH A . H 7 HOH 52 531 70 HOH HOH A . H 7 HOH 53 532 71 HOH HOH A . H 7 HOH 54 533 74 HOH HOH A . H 7 HOH 55 534 75 HOH HOH A . H 7 HOH 56 535 76 HOH HOH A . H 7 HOH 57 536 77 HOH HOH A . H 7 HOH 58 537 78 HOH HOH A . H 7 HOH 59 538 79 HOH HOH A . H 7 HOH 60 539 80 HOH HOH A . H 7 HOH 61 540 81 HOH HOH A . H 7 HOH 62 541 82 HOH HOH A . H 7 HOH 63 542 83 HOH HOH A . H 7 HOH 64 543 84 HOH HOH A . H 7 HOH 65 544 86 HOH HOH A . H 7 HOH 66 545 87 HOH HOH A . H 7 HOH 67 546 88 HOH HOH A . H 7 HOH 68 547 89 HOH HOH A . H 7 HOH 69 548 90 HOH HOH A . H 7 HOH 70 549 91 HOH HOH A . H 7 HOH 71 550 92 HOH HOH A . H 7 HOH 72 551 93 HOH HOH A . H 7 HOH 73 552 94 HOH HOH A . H 7 HOH 74 553 95 HOH HOH A . H 7 HOH 75 554 96 HOH HOH A . H 7 HOH 76 555 98 HOH HOH A . H 7 HOH 77 556 99 HOH HOH A . H 7 HOH 78 557 100 HOH HOH A . H 7 HOH 79 558 101 HOH HOH A . H 7 HOH 80 559 102 HOH HOH A . H 7 HOH 81 560 104 HOH HOH A . H 7 HOH 82 561 106 HOH HOH A . H 7 HOH 83 562 107 HOH HOH A . H 7 HOH 84 563 108 HOH HOH A . H 7 HOH 85 564 109 HOH HOH A . H 7 HOH 86 565 110 HOH HOH A . H 7 HOH 87 566 111 HOH HOH A . H 7 HOH 88 567 121 HOH HOH A . H 7 HOH 89 568 125 HOH HOH A . H 7 HOH 90 569 126 HOH HOH A . H 7 HOH 91 570 127 HOH HOH A . H 7 HOH 92 571 200 HOH HOH A . H 7 HOH 93 572 201 HOH HOH A . H 7 HOH 94 573 202 HOH HOH A . H 7 HOH 95 574 203 HOH HOH A . H 7 HOH 96 575 210 HOH HOH A . H 7 HOH 97 576 206 HOH HOH A . H 7 HOH 98 577 211 HOH HOH A . H 7 HOH 99 578 213 HOH HOH A . H 7 HOH 100 579 214 HOH HOH A . H 7 HOH 101 580 215 HOH HOH A . H 7 HOH 102 581 216 HOH HOH A . H 7 HOH 103 582 218 HOH HOH A . H 7 HOH 104 583 220 HOH HOH A . H 7 HOH 105 584 222 HOH HOH A . H 7 HOH 106 585 223 HOH HOH A . H 7 HOH 107 586 228 HOH HOH A . H 7 HOH 108 587 229 HOH HOH A . H 7 HOH 109 588 230 HOH HOH A . H 7 HOH 110 589 231 HOH HOH A . H 7 HOH 111 590 233 HOH HOH A . H 7 HOH 112 591 235 HOH HOH A . H 7 HOH 113 592 236 HOH HOH A . H 7 HOH 114 593 237 HOH HOH A . H 7 HOH 115 594 238 HOH HOH A . H 7 HOH 116 595 239 HOH HOH A . H 7 HOH 117 596 240 HOH HOH A . H 7 HOH 118 597 241 HOH HOH A . H 7 HOH 119 598 244 HOH HOH A . H 7 HOH 120 599 245 HOH HOH A . H 7 HOH 121 600 247 HOH HOH A . H 7 HOH 122 601 249 HOH HOH A . H 7 HOH 123 602 250 HOH HOH A . H 7 HOH 124 603 252 HOH HOH A . H 7 HOH 125 604 253 HOH HOH A . H 7 HOH 126 605 255 HOH HOH A . H 7 HOH 127 606 259 HOH HOH A . H 7 HOH 128 607 260 HOH HOH A . H 7 HOH 129 608 262 HOH HOH A . H 7 HOH 130 609 264 HOH HOH A . H 7 HOH 131 610 265 HOH HOH A . H 7 HOH 132 611 273 HOH HOH A . H 7 HOH 133 612 279 HOH HOH A . H 7 HOH 134 613 284 HOH HOH A . H 7 HOH 135 614 285 HOH HOH A . H 7 HOH 136 615 287 HOH HOH A . H 7 HOH 137 616 289 HOH HOH A . H 7 HOH 138 617 292 HOH HOH A . H 7 HOH 139 618 293 HOH HOH A . H 7 HOH 140 619 302 HOH HOH A . H 7 HOH 141 620 305 HOH HOH A . H 7 HOH 142 621 307 HOH HOH A . H 7 HOH 143 622 308 HOH HOH A . H 7 HOH 144 623 309 HOH HOH A . H 7 HOH 145 624 313 HOH HOH A . H 7 HOH 146 625 318 HOH HOH A . H 7 HOH 147 626 320 HOH HOH A . H 7 HOH 148 627 322 HOH HOH A . H 7 HOH 149 628 325 HOH HOH A . H 7 HOH 150 629 326 HOH HOH A . H 7 HOH 151 630 329 HOH HOH A . H 7 HOH 152 631 330 HOH HOH A . H 7 HOH 153 632 332 HOH HOH A . H 7 HOH 154 633 333 HOH HOH A . H 7 HOH 155 634 334 HOH HOH A . H 7 HOH 156 635 336 HOH HOH A . H 7 HOH 157 636 337 HOH HOH A . H 7 HOH 158 637 340 HOH HOH A . H 7 HOH 159 638 341 HOH HOH A . H 7 HOH 160 639 345 HOH HOH A . H 7 HOH 161 640 347 HOH HOH A . H 7 HOH 162 641 350 HOH HOH A . H 7 HOH 163 642 355 HOH HOH A . H 7 HOH 164 643 356 HOH HOH A . H 7 HOH 165 644 364 HOH HOH A . H 7 HOH 166 645 369 HOH HOH A . H 7 HOH 167 646 370 HOH HOH A . H 7 HOH 168 647 373 HOH HOH A . H 7 HOH 169 648 374 HOH HOH A . H 7 HOH 170 649 375 HOH HOH A . H 7 HOH 171 650 377 HOH HOH A . H 7 HOH 172 651 383 HOH HOH A . H 7 HOH 173 652 386 HOH HOH A . H 7 HOH 174 653 504 HOH HOH A . H 7 HOH 175 654 509 HOH HOH A . H 7 HOH 176 655 510 HOH HOH A . H 7 HOH 177 656 516 HOH HOH A . H 7 HOH 178 657 519 HOH HOH A . H 7 HOH 179 658 521 HOH HOH A . H 7 HOH 180 659 529 HOH HOH A . H 7 HOH 181 660 531 HOH HOH A . H 7 HOH 182 661 533 HOH HOH A . H 7 HOH 183 662 534 HOH HOH A . H 7 HOH 184 663 539 HOH HOH A . H 7 HOH 185 664 542 HOH HOH A . H 7 HOH 186 665 544 HOH HOH A . H 7 HOH 187 666 560 HOH HOH A . H 7 HOH 188 667 565 HOH HOH A . H 7 HOH 189 668 601 HOH HOH A . H 7 HOH 190 669 602 HOH HOH A . H 7 HOH 191 670 603 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id MAN _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 475 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code G _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id C _pdbx_unobs_or_zero_occ_atoms.label_comp_id MAN _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal R-AXIS 'data collection' II ? 1 PROTEIN 'data reduction' V4 ? 2 X-PLOR 'model building' 3.0 ? 3 X-PLOR refinement 3.0 ? 4 R-AXIS 'data reduction' II ? 5 PROTEIN 'data scaling' 'V. 4' ? 6 X-PLOR phasing 3.0 ? 7 # _cell.entry_id 1BJI _cell.length_a 182.800 _cell.length_b 182.800 _cell.length_c 182.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BJI _symmetry.space_group_name_H-M 'I 4 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 # _exptl.entry_id 1BJI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_percent_sol 54. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;1.9M PHOSPHATE(PH 5.9) THE GLAXO 6-CARBOXAMIDE COMPOUND GR217029 WAS SOAKED IN TERN N9 NEURAMININDASE CRYSTALS AT 5 MM FOR 24HR. THIS EXPERIMENT WAS CARRIED OUT TO DETERMINE THE BINDING MODE OF THE 6-CARBOXAMIDE HYDROPHOBIC GROUP. A NEW HYDROPHOBIC POCKET WAS DISCOVERED EARLIER WITH A METHYL, ETHYL GROUP ATTACHED TO THE AMIDE OF TH3E SIX-CARBOXAMIDE. THIS COMPOUND HAS A MUCH LARGER HYDROPHOBIC GROUP ATTACHED., pH 7.0 ; # _diffrn.id 1 _diffrn.ambient_temp 300 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1994-06-10 _diffrn_detector.details 'YALE MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'MACSCIENCE M18X' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1BJI _reflns.observed_criterion_sigma_I 2. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100. _reflns.d_resolution_high 2.0 _reflns.number_obs 119194 _reflns.number_all ? _reflns.percent_possible_obs 68. _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_Rsym_value 0.084 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.07 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.012 _reflns_shell.d_res_low 2.151 _reflns_shell.percent_possible_all 27. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1BJI _refine.ls_number_reflns_obs 22246 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6. _refine.ls_d_res_high 2. _refine.ls_percent_reflns_obs 68. _refine.ls_R_factor_obs 0.155 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.155 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'TERN N9 NEURAMINIDASE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1BJI _refine_analyze.Luzzati_coordinate_error_obs 0.02 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs 6. _refine_analyze.Luzzati_coordinate_error_free 0.02 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3067 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 140 _refine_hist.number_atoms_solvent 191 _refine_hist.number_atoms_total 3398 _refine_hist.d_res_high 2. _refine_hist.d_res_low 6. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.9 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.6 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.53 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 2.5 ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 3.0 ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.0 ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 3.5 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 15 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.04 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 24. _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 CHO_2.PAR TOPCHO.PAR 'X-RAY DIFFRACTION' 3 ? GR217.TOP 'X-RAY DIFFRACTION' 4 ? TOPHPEP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1BJI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1BJI _struct.title ;THE X-RAY STRUCTURE OF A COMPLEX OF TERN N9 INFLUENZA VIRUS NEURAMINIDASE COMPLEXED WITH THE GLAXO 6-CARBOXAMIDE SIALIC ACID ANALOGUE GR217029 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BJI _struct_keywords.pdbx_keywords NEURAMINIDASE _struct_keywords.text ;NEURAMINIDASE, INFLUENZA PROTEIN, INHIBITOR COMPLEX, 6-CARBOXAMIDE DERIVATIVE, SIALIC ACID ANALOGUE, GLAXO GR217029, HYDROLASE, GLYCOPROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NRAM_IATRA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P03472 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MNPNQKILCTSATALVIGTIAVLIGITNLGLNIGLHLKPSCNCSHSQPEATNASQTIINNYYNDTNITQISNTNIQVEER AIRDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALI SWPLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCP VVFTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYIC SPVLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLN TDWSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BJI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 388 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P03472 _struct_ref_seq.db_align_beg 83 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 470 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 82 _struct_ref_seq.pdbx_auth_seq_align_end 468 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 15_555 y,-x,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 16_555 -y,x,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 24 ? ASP A 30 ? ALA A 105 ASP A 111 1 ? 7 HELX_P HELX_P2 2 LYS A 62 ? SER A 64 ? LYS A 143 SER A 145 5 ? 3 HELX_P HELX_P3 3 ILE A 384 ? TYR A 386 ? ILE A 464 TYR A 466 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 337 SG ? ? A CYS 92 A CYS 417 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf2 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 124 A CYS 129 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf3 disulf ? ? A CYS 95 SG ? ? ? 1_555 A CYS 113 SG ? ? A CYS 175 A CYS 193 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf4 disulf ? ? A CYS 103 SG ? ? ? 1_555 A CYS 150 SG ? ? A CYS 183 A CYS 230 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? A CYS 152 SG ? ? ? 1_555 A CYS 157 SG ? ? A CYS 232 A CYS 237 1_555 ? ? ? ? ? ? ? 2.015 ? ? disulf6 disulf ? ? A CYS 198 SG ? ? ? 1_555 A CYS 211 SG ? ? A CYS 278 A CYS 291 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf7 disulf ? ? A CYS 200 SG ? ? ? 1_555 A CYS 209 SG ? ? A CYS 280 A CYS 289 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf8 disulf ? ? A CYS 238 SG ? ? ? 1_555 A CYS 256 SG ? ? A CYS 318 A CYS 337 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf9 disulf ? ? A CYS 341 SG ? ? ? 1_555 A CYS 367 SG ? ? A CYS 421 A CYS 447 1_555 ? ? ? ? ? ? ? 2.028 ? ? covale1 covale one ? A ASN 5 ND2 ? ? ? 1_555 D NAG . C1 ? A A ASN 86 A NAG 476 1_555 ? ? ? ? ? ? ? 1.458 ? N-Glycosylation covale2 covale one ? A ASN 65 ND2 ? ? ? 1_555 E NAG . C1 ? A A ASN 146 A NAG 477 1_555 ? ? ? ? ? ? ? 1.487 ? N-Glycosylation covale3 covale one ? A ASN 120 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 200 B NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.360 ? ? covale6 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale7 covale both ? B MAN . O2 ? ? ? 1_555 B MAN . C1 ? ? B MAN 4 B MAN 5 1_555 ? ? ? ? ? ? ? 1.417 ? ? covale8 covale both ? B MAN . O2 ? ? ? 1_555 B MAN . C1 ? ? B MAN 5 B MAN 6 1_555 ? ? ? ? ? ? ? 1.408 ? ? metalc1 metalc ? ? A ASP 213 O ? ? ? 1_555 F CA . CA ? ? A ASP 293 A CA 478 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc2 metalc ? ? A GLY 217 O ? ? ? 1_555 F CA . CA ? ? A GLY 297 A CA 478 1_555 ? ? ? ? ? ? ? 2.491 ? ? metalc3 metalc ? ? A ASP 244 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 324 A CA 478 1_555 ? ? ? ? ? ? ? 2.701 ? ? metalc4 metalc ? ? A ASN 266 O ? ? ? 1_555 F CA . CA ? ? A ASN 347 A CA 478 1_555 ? ? ? ? ? ? ? 2.551 ? ? metalc5 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 478 A HOH 487 1_555 ? ? ? ? ? ? ? 2.704 ? ? metalc6 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 478 A HOH 570 1_555 ? ? ? ? ? ? ? 2.340 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 213 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? A GLY 217 ? A GLY 297 ? 1_555 82.4 ? 2 O ? A ASP 213 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 OD2 ? A ASP 244 ? A ASP 324 ? 1_555 92.3 ? 3 O ? A GLY 217 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 OD2 ? A ASP 244 ? A ASP 324 ? 1_555 88.1 ? 4 O ? A ASP 213 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? A ASN 266 ? A ASN 347 ? 1_555 104.1 ? 5 O ? A GLY 217 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? A ASN 266 ? A ASN 347 ? 1_555 165.7 ? 6 OD2 ? A ASP 244 ? A ASP 324 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? A ASN 266 ? A ASN 347 ? 1_555 104.1 ? 7 O ? A ASP 213 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 487 ? 1_555 89.4 ? 8 O ? A GLY 217 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 487 ? 1_555 89.4 ? 9 OD2 ? A ASP 244 ? A ASP 324 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 487 ? 1_555 176.7 ? 10 O ? A ASN 266 ? A ASN 347 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 487 ? 1_555 78.1 ? 11 O ? A ASP 213 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 570 ? 1_555 171.2 ? 12 O ? A GLY 217 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 570 ? 1_555 92.1 ? 13 OD2 ? A ASP 244 ? A ASP 324 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 570 ? 1_555 94.4 ? 14 O ? A ASN 266 ? A ASN 347 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 570 ? 1_555 79.8 ? 15 O ? H HOH . ? A HOH 487 ? 1_555 CA ? F CA . ? A CA 478 ? 1_555 O ? H HOH . ? A HOH 570 ? 1_555 83.6 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 120 ? NAG B 1 ? 1_555 ASN A 200 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG D . ? ASN A 5 ? NAG A 476 A 1_555 ASN A 86 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG E . ? ASN A 65 ? NAG A 477 A 1_555 ASN A 146 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 CYS A 11 ? CYS A 337 ? CYS A 92 ? 1_555 CYS A 417 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 43 ? CYS A 48 ? CYS A 124 ? 1_555 CYS A 129 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 95 ? CYS A 113 ? CYS A 175 ? 1_555 CYS A 193 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 103 ? CYS A 150 ? CYS A 183 ? 1_555 CYS A 230 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS A 152 ? CYS A 157 ? CYS A 232 ? 1_555 CYS A 237 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS A 198 ? CYS A 211 ? CYS A 278 ? 1_555 CYS A 291 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS A 200 ? CYS A 209 ? CYS A 280 ? 1_555 CYS A 289 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS A 238 ? CYS A 256 ? CYS A 318 ? 1_555 CYS A 337 ? 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS A 341 ? CYS A 367 ? CYS A 421 ? 1_555 CYS A 447 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 245 A . ? ASN 325 A PRO 246 A ? PRO 326 A 1 -8.77 2 ARG 350 A . ? ARG 430 A PRO 351 A ? PRO 431 A 1 9.08 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 3 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 40 ? CYS A 43 ? TYR A 121 CYS A 124 A 2 CYS A 48 ? SER A 54 ? CYS A 129 SER A 135 A 3 ALA A 76 ? PRO A 81 ? ALA A 157 PRO A 162 A 4 ARG A 92 ? ILE A 96 ? ARG A 172 ILE A 176 B 1 SER A 99 ? HIS A 104 ? SER A 179 HIS A 184 B 2 ARG A 109 ? SER A 115 ? ARG A 189 SER A 195 B 3 SER A 122 ? TYR A 127 ? SER A 202 TYR A 207 B 4 ARG A 130 ? ASN A 136 ? ARG A 210 ASN A 216 C 1 VAL A 151 ? HIS A 153 ? VAL A 231 HIS A 233 C 2 VAL A 156 ? ASP A 163 ? VAL A 236 ASP A 243 C 3 GLU A 171 ? LYS A 178 ? GLU A 251 LYS A 258 C 4 LYS A 181 ? PRO A 187 ? LYS A 261 PRO A 267 D 1 SER A 199 ? GLU A 203 ? SER A 279 GLU A 283 D 2 GLU A 206 ? THR A 210 ? GLU A 286 THR A 290 D 3 PRO A 221 ? ASP A 226 ? PRO A 301 ASP A 306 D 4 THR A 231 ? TYR A 236 ? THR A 311 TYR A 316 E 1 TRP A 280 ? ARG A 283 ? TRP A 361 ARG A 364 E 2 TYR A 293 ? LYS A 297 ? TYR A 374 LYS A 378 E 3 GLN A 311 ? VAL A 316 ? GLN A 392 VAL A 398 F 1 SER A 325 ? MET A 329 ? SER A 407 MET A 411 F 2 ALA A 340 ? GLY A 349 ? ALA A 420 GLY A 429 F 3 THR A 359 ? SER A 369 ? THR A 439 SER A 449 F 4 SER A 15 ? LYS A 21 ? SER A 96 LYS A 102 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 40 ? O TYR A 121 N TYR A 51 ? N TYR A 132 A 2 3 O PHE A 50 ? O PHE A 131 N TRP A 80 ? N TRP A 161 A 3 4 O LEU A 77 ? O LEU A 158 N CYS A 95 ? N CYS A 175 B 1 2 O SER A 99 ? O SER A 179 N ILE A 114 ? N ILE A 194 B 2 3 O SER A 111 ? O SER A 191 N TRP A 126 ? N TRP A 206 B 3 4 O ALA A 123 ? O ALA A 203 N ILE A 135 ? N ILE A 215 C 1 2 O VAL A 151 ? O VAL A 231 N PRO A 158 ? N PRO A 238 C 2 3 O CYS A 157 ? O CYS A 237 N PHE A 177 ? N PHE A 257 C 3 4 O ILE A 174 ? O ILE A 254 N GLU A 186 ? N GLU A 266 D 1 2 O SER A 199 ? O SER A 279 N THR A 210 ? N THR A 290 D 2 3 O ILE A 207 ? O ILE A 287 N ILE A 225 ? N ILE A 305 D 3 4 O VAL A 222 ? O VAL A 302 N GLN A 235 ? N GLN A 315 E 1 2 O LEU A 281 ? O LEU A 362 N LEU A 296 ? N LEU A 377 E 2 3 O TYR A 293 ? O TYR A 374 N VAL A 316 ? N VAL A 398 F 1 2 O GLY A 326 ? O GLY A 408 N TYR A 343 ? N TYR A 423 F 2 3 O PHE A 342 ? O PHE A 422 N MET A 366 ? N MET A 446 F 3 4 O SER A 365 ? O SER A 445 N GLY A 20 ? N GLY A 101 # _pdbx_entry_details.entry_id 1BJI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 96 ? ? -170.41 -177.14 2 1 ASP A 111 ? ? -148.21 46.77 3 1 THR A 148 ? ? -69.22 17.85 4 1 SER A 164 ? ? 76.64 -0.47 5 1 ASN A 200 ? ? -155.51 42.22 6 1 ILE A 222 ? ? 49.14 70.61 7 1 GLU A 277 ? ? 37.95 67.04 8 1 CYS A 291 ? ? -113.14 -158.25 9 1 GLN A 315 ? ? -162.76 -168.71 10 1 ASN A 359 ? ? -83.38 47.81 11 1 SER A 404 ? ? -128.35 -142.24 12 1 PHE A 452 ? ? -105.28 75.62 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 5 A ASN 86 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 65 A ASN 146 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 120 A ASN 200 ? ASN 'GLYCOSYLATION SITE' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CA CA CA N N 98 CYS N N N N 99 CYS CA C N R 100 CYS C C N N 101 CYS O O N N 102 CYS CB C N N 103 CYS SG S N N 104 CYS OXT O N N 105 CYS H H N N 106 CYS H2 H N N 107 CYS HA H N N 108 CYS HB2 H N N 109 CYS HB3 H N N 110 CYS HG H N N 111 CYS HXT H N N 112 DPC C1 C N N 113 DPC O1A O N N 114 DPC O1B O N N 115 DPC C2 C N N 116 DPC C3 C N N 117 DPC C4 C N S 118 DPC C5 C N R 119 DPC N5 N N N 120 DPC C10 C N N 121 DPC O10 O N N 122 DPC C11 C N N 123 DPC C6 C N R 124 DPC O6 O N N 125 DPC C7 C N N 126 DPC O7 O N N 127 DPC N8 N N N 128 DPC C81 C N N 129 DPC C82 C N N 130 DPC CG C Y N 131 DPC CD1 C Y N 132 DPC CD2 C Y N 133 DPC CE1 C Y N 134 DPC CE2 C Y N 135 DPC CZ C Y N 136 DPC C9 C N N 137 DPC C91 C N N 138 DPC C92 C N N 139 DPC NE N N N 140 DPC HO1 H N N 141 DPC H3 H N N 142 DPC H4 H N N 143 DPC H5 H N N 144 DPC HN5 H N N 145 DPC H111 H N N 146 DPC H112 H N N 147 DPC H113 H N N 148 DPC H6 H N N 149 DPC H811 H N N 150 DPC H812 H N N 151 DPC H821 H N N 152 DPC H822 H N N 153 DPC HD1 H N N 154 DPC HD2 H N N 155 DPC HE1 H N N 156 DPC HE2 H N N 157 DPC HZ H N N 158 DPC H91 H N N 159 DPC H92 H N N 160 DPC H911 H N N 161 DPC H912 H N N 162 DPC H921 H N N 163 DPC H922 H N N 164 DPC H923 H N N 165 DPC HNE1 H N N 166 DPC HNE2 H N N 167 GLN N N N N 168 GLN CA C N S 169 GLN C C N N 170 GLN O O N N 171 GLN CB C N N 172 GLN CG C N N 173 GLN CD C N N 174 GLN OE1 O N N 175 GLN NE2 N N N 176 GLN OXT O N N 177 GLN H H N N 178 GLN H2 H N N 179 GLN HA H N N 180 GLN HB2 H N N 181 GLN HB3 H N N 182 GLN HG2 H N N 183 GLN HG3 H N N 184 GLN HE21 H N N 185 GLN HE22 H N N 186 GLN HXT H N N 187 GLU N N N N 188 GLU CA C N S 189 GLU C C N N 190 GLU O O N N 191 GLU CB C N N 192 GLU CG C N N 193 GLU CD C N N 194 GLU OE1 O N N 195 GLU OE2 O N N 196 GLU OXT O N N 197 GLU H H N N 198 GLU H2 H N N 199 GLU HA H N N 200 GLU HB2 H N N 201 GLU HB3 H N N 202 GLU HG2 H N N 203 GLU HG3 H N N 204 GLU HE2 H N N 205 GLU HXT H N N 206 GLY N N N N 207 GLY CA C N N 208 GLY C C N N 209 GLY O O N N 210 GLY OXT O N N 211 GLY H H N N 212 GLY H2 H N N 213 GLY HA2 H N N 214 GLY HA3 H N N 215 GLY HXT H N N 216 HIS N N N N 217 HIS CA C N S 218 HIS C C N N 219 HIS O O N N 220 HIS CB C N N 221 HIS CG C Y N 222 HIS ND1 N Y N 223 HIS CD2 C Y N 224 HIS CE1 C Y N 225 HIS NE2 N Y N 226 HIS OXT O N N 227 HIS H H N N 228 HIS H2 H N N 229 HIS HA H N N 230 HIS HB2 H N N 231 HIS HB3 H N N 232 HIS HD1 H N N 233 HIS HD2 H N N 234 HIS HE1 H N N 235 HIS HE2 H N N 236 HIS HXT H N N 237 HOH O O N N 238 HOH H1 H N N 239 HOH H2 H N N 240 ILE N N N N 241 ILE CA C N S 242 ILE C C N N 243 ILE O O N N 244 ILE CB C N S 245 ILE CG1 C N N 246 ILE CG2 C N N 247 ILE CD1 C N N 248 ILE OXT O N N 249 ILE H H N N 250 ILE H2 H N N 251 ILE HA H N N 252 ILE HB H N N 253 ILE HG12 H N N 254 ILE HG13 H N N 255 ILE HG21 H N N 256 ILE HG22 H N N 257 ILE HG23 H N N 258 ILE HD11 H N N 259 ILE HD12 H N N 260 ILE HD13 H N N 261 ILE HXT H N N 262 LEU N N N N 263 LEU CA C N S 264 LEU C C N N 265 LEU O O N N 266 LEU CB C N N 267 LEU CG C N N 268 LEU CD1 C N N 269 LEU CD2 C N N 270 LEU OXT O N N 271 LEU H H N N 272 LEU H2 H N N 273 LEU HA H N N 274 LEU HB2 H N N 275 LEU HB3 H N N 276 LEU HG H N N 277 LEU HD11 H N N 278 LEU HD12 H N N 279 LEU HD13 H N N 280 LEU HD21 H N N 281 LEU HD22 H N N 282 LEU HD23 H N N 283 LEU HXT H N N 284 LYS N N N N 285 LYS CA C N S 286 LYS C C N N 287 LYS O O N N 288 LYS CB C N N 289 LYS CG C N N 290 LYS CD C N N 291 LYS CE C N N 292 LYS NZ N N N 293 LYS OXT O N N 294 LYS H H N N 295 LYS H2 H N N 296 LYS HA H N N 297 LYS HB2 H N N 298 LYS HB3 H N N 299 LYS HG2 H N N 300 LYS HG3 H N N 301 LYS HD2 H N N 302 LYS HD3 H N N 303 LYS HE2 H N N 304 LYS HE3 H N N 305 LYS HZ1 H N N 306 LYS HZ2 H N N 307 LYS HZ3 H N N 308 LYS HXT H N N 309 MAN C1 C N S 310 MAN C2 C N S 311 MAN C3 C N S 312 MAN C4 C N S 313 MAN C5 C N R 314 MAN C6 C N N 315 MAN O1 O N N 316 MAN O2 O N N 317 MAN O3 O N N 318 MAN O4 O N N 319 MAN O5 O N N 320 MAN O6 O N N 321 MAN H1 H N N 322 MAN H2 H N N 323 MAN H3 H N N 324 MAN H4 H N N 325 MAN H5 H N N 326 MAN H61 H N N 327 MAN H62 H N N 328 MAN HO1 H N N 329 MAN HO2 H N N 330 MAN HO3 H N N 331 MAN HO4 H N N 332 MAN HO6 H N N 333 MET N N N N 334 MET CA C N S 335 MET C C N N 336 MET O O N N 337 MET CB C N N 338 MET CG C N N 339 MET SD S N N 340 MET CE C N N 341 MET OXT O N N 342 MET H H N N 343 MET H2 H N N 344 MET HA H N N 345 MET HB2 H N N 346 MET HB3 H N N 347 MET HG2 H N N 348 MET HG3 H N N 349 MET HE1 H N N 350 MET HE2 H N N 351 MET HE3 H N N 352 MET HXT H N N 353 NAG C1 C N R 354 NAG C2 C N R 355 NAG C3 C N R 356 NAG C4 C N S 357 NAG C5 C N R 358 NAG C6 C N N 359 NAG C7 C N N 360 NAG C8 C N N 361 NAG N2 N N N 362 NAG O1 O N N 363 NAG O3 O N N 364 NAG O4 O N N 365 NAG O5 O N N 366 NAG O6 O N N 367 NAG O7 O N N 368 NAG H1 H N N 369 NAG H2 H N N 370 NAG H3 H N N 371 NAG H4 H N N 372 NAG H5 H N N 373 NAG H61 H N N 374 NAG H62 H N N 375 NAG H81 H N N 376 NAG H82 H N N 377 NAG H83 H N N 378 NAG HN2 H N N 379 NAG HO1 H N N 380 NAG HO3 H N N 381 NAG HO4 H N N 382 NAG HO6 H N N 383 PHE N N N N 384 PHE CA C N S 385 PHE C C N N 386 PHE O O N N 387 PHE CB C N N 388 PHE CG C Y N 389 PHE CD1 C Y N 390 PHE CD2 C Y N 391 PHE CE1 C Y N 392 PHE CE2 C Y N 393 PHE CZ C Y N 394 PHE OXT O N N 395 PHE H H N N 396 PHE H2 H N N 397 PHE HA H N N 398 PHE HB2 H N N 399 PHE HB3 H N N 400 PHE HD1 H N N 401 PHE HD2 H N N 402 PHE HE1 H N N 403 PHE HE2 H N N 404 PHE HZ H N N 405 PHE HXT H N N 406 PRO N N N N 407 PRO CA C N S 408 PRO C C N N 409 PRO O O N N 410 PRO CB C N N 411 PRO CG C N N 412 PRO CD C N N 413 PRO OXT O N N 414 PRO H H N N 415 PRO HA H N N 416 PRO HB2 H N N 417 PRO HB3 H N N 418 PRO HG2 H N N 419 PRO HG3 H N N 420 PRO HD2 H N N 421 PRO HD3 H N N 422 PRO HXT H N N 423 SER N N N N 424 SER CA C N S 425 SER C C N N 426 SER O O N N 427 SER CB C N N 428 SER OG O N N 429 SER OXT O N N 430 SER H H N N 431 SER H2 H N N 432 SER HA H N N 433 SER HB2 H N N 434 SER HB3 H N N 435 SER HG H N N 436 SER HXT H N N 437 THR N N N N 438 THR CA C N S 439 THR C C N N 440 THR O O N N 441 THR CB C N R 442 THR OG1 O N N 443 THR CG2 C N N 444 THR OXT O N N 445 THR H H N N 446 THR H2 H N N 447 THR HA H N N 448 THR HB H N N 449 THR HG1 H N N 450 THR HG21 H N N 451 THR HG22 H N N 452 THR HG23 H N N 453 THR HXT H N N 454 TRP N N N N 455 TRP CA C N S 456 TRP C C N N 457 TRP O O N N 458 TRP CB C N N 459 TRP CG C Y N 460 TRP CD1 C Y N 461 TRP CD2 C Y N 462 TRP NE1 N Y N 463 TRP CE2 C Y N 464 TRP CE3 C Y N 465 TRP CZ2 C Y N 466 TRP CZ3 C Y N 467 TRP CH2 C Y N 468 TRP OXT O N N 469 TRP H H N N 470 TRP H2 H N N 471 TRP HA H N N 472 TRP HB2 H N N 473 TRP HB3 H N N 474 TRP HD1 H N N 475 TRP HE1 H N N 476 TRP HE3 H N N 477 TRP HZ2 H N N 478 TRP HZ3 H N N 479 TRP HH2 H N N 480 TRP HXT H N N 481 TYR N N N N 482 TYR CA C N S 483 TYR C C N N 484 TYR O O N N 485 TYR CB C N N 486 TYR CG C Y N 487 TYR CD1 C Y N 488 TYR CD2 C Y N 489 TYR CE1 C Y N 490 TYR CE2 C Y N 491 TYR CZ C Y N 492 TYR OH O N N 493 TYR OXT O N N 494 TYR H H N N 495 TYR H2 H N N 496 TYR HA H N N 497 TYR HB2 H N N 498 TYR HB3 H N N 499 TYR HD1 H N N 500 TYR HD2 H N N 501 TYR HE1 H N N 502 TYR HE2 H N N 503 TYR HH H N N 504 TYR HXT H N N 505 VAL N N N N 506 VAL CA C N S 507 VAL C C N N 508 VAL O O N N 509 VAL CB C N N 510 VAL CG1 C N N 511 VAL CG2 C N N 512 VAL OXT O N N 513 VAL H H N N 514 VAL H2 H N N 515 VAL HA H N N 516 VAL HB H N N 517 VAL HG11 H N N 518 VAL HG12 H N N 519 VAL HG13 H N N 520 VAL HG21 H N N 521 VAL HG22 H N N 522 VAL HG23 H N N 523 VAL HXT H N N 524 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 DPC C1 O1A doub N N 107 DPC C1 O1B sing N N 108 DPC C1 C2 sing N N 109 DPC O1B HO1 sing N N 110 DPC C2 C3 doub N N 111 DPC C2 O6 sing N N 112 DPC C3 C4 sing N N 113 DPC C3 H3 sing N N 114 DPC C4 C5 sing N N 115 DPC C4 NE sing N N 116 DPC C4 H4 sing N N 117 DPC C5 N5 sing N N 118 DPC C5 C6 sing N N 119 DPC C5 H5 sing N N 120 DPC N5 C10 sing N N 121 DPC N5 HN5 sing N N 122 DPC C10 O10 doub N N 123 DPC C10 C11 sing N N 124 DPC C11 H111 sing N N 125 DPC C11 H112 sing N N 126 DPC C11 H113 sing N N 127 DPC C6 O6 sing N N 128 DPC C6 C7 sing N N 129 DPC C6 H6 sing N N 130 DPC C7 O7 doub N N 131 DPC C7 N8 sing N N 132 DPC N8 C81 sing N N 133 DPC N8 C9 sing N N 134 DPC C81 C82 sing N N 135 DPC C81 H811 sing N N 136 DPC C81 H812 sing N N 137 DPC C82 CG sing N N 138 DPC C82 H821 sing N N 139 DPC C82 H822 sing N N 140 DPC CG CD1 doub Y N 141 DPC CG CD2 sing Y N 142 DPC CD1 CE1 sing Y N 143 DPC CD1 HD1 sing N N 144 DPC CD2 CE2 doub Y N 145 DPC CD2 HD2 sing N N 146 DPC CE1 CZ doub Y N 147 DPC CE1 HE1 sing N N 148 DPC CE2 CZ sing Y N 149 DPC CE2 HE2 sing N N 150 DPC CZ HZ sing N N 151 DPC C9 C91 sing N N 152 DPC C9 H91 sing N N 153 DPC C9 H92 sing N N 154 DPC C91 C92 sing N N 155 DPC C91 H911 sing N N 156 DPC C91 H912 sing N N 157 DPC C92 H921 sing N N 158 DPC C92 H922 sing N N 159 DPC C92 H923 sing N N 160 DPC NE HNE1 sing N N 161 DPC NE HNE2 sing N N 162 GLN N CA sing N N 163 GLN N H sing N N 164 GLN N H2 sing N N 165 GLN CA C sing N N 166 GLN CA CB sing N N 167 GLN CA HA sing N N 168 GLN C O doub N N 169 GLN C OXT sing N N 170 GLN CB CG sing N N 171 GLN CB HB2 sing N N 172 GLN CB HB3 sing N N 173 GLN CG CD sing N N 174 GLN CG HG2 sing N N 175 GLN CG HG3 sing N N 176 GLN CD OE1 doub N N 177 GLN CD NE2 sing N N 178 GLN NE2 HE21 sing N N 179 GLN NE2 HE22 sing N N 180 GLN OXT HXT sing N N 181 GLU N CA sing N N 182 GLU N H sing N N 183 GLU N H2 sing N N 184 GLU CA C sing N N 185 GLU CA CB sing N N 186 GLU CA HA sing N N 187 GLU C O doub N N 188 GLU C OXT sing N N 189 GLU CB CG sing N N 190 GLU CB HB2 sing N N 191 GLU CB HB3 sing N N 192 GLU CG CD sing N N 193 GLU CG HG2 sing N N 194 GLU CG HG3 sing N N 195 GLU CD OE1 doub N N 196 GLU CD OE2 sing N N 197 GLU OE2 HE2 sing N N 198 GLU OXT HXT sing N N 199 GLY N CA sing N N 200 GLY N H sing N N 201 GLY N H2 sing N N 202 GLY CA C sing N N 203 GLY CA HA2 sing N N 204 GLY CA HA3 sing N N 205 GLY C O doub N N 206 GLY C OXT sing N N 207 GLY OXT HXT sing N N 208 HIS N CA sing N N 209 HIS N H sing N N 210 HIS N H2 sing N N 211 HIS CA C sing N N 212 HIS CA CB sing N N 213 HIS CA HA sing N N 214 HIS C O doub N N 215 HIS C OXT sing N N 216 HIS CB CG sing N N 217 HIS CB HB2 sing N N 218 HIS CB HB3 sing N N 219 HIS CG ND1 sing Y N 220 HIS CG CD2 doub Y N 221 HIS ND1 CE1 doub Y N 222 HIS ND1 HD1 sing N N 223 HIS CD2 NE2 sing Y N 224 HIS CD2 HD2 sing N N 225 HIS CE1 NE2 sing Y N 226 HIS CE1 HE1 sing N N 227 HIS NE2 HE2 sing N N 228 HIS OXT HXT sing N N 229 HOH O H1 sing N N 230 HOH O H2 sing N N 231 ILE N CA sing N N 232 ILE N H sing N N 233 ILE N H2 sing N N 234 ILE CA C sing N N 235 ILE CA CB sing N N 236 ILE CA HA sing N N 237 ILE C O doub N N 238 ILE C OXT sing N N 239 ILE CB CG1 sing N N 240 ILE CB CG2 sing N N 241 ILE CB HB sing N N 242 ILE CG1 CD1 sing N N 243 ILE CG1 HG12 sing N N 244 ILE CG1 HG13 sing N N 245 ILE CG2 HG21 sing N N 246 ILE CG2 HG22 sing N N 247 ILE CG2 HG23 sing N N 248 ILE CD1 HD11 sing N N 249 ILE CD1 HD12 sing N N 250 ILE CD1 HD13 sing N N 251 ILE OXT HXT sing N N 252 LEU N CA sing N N 253 LEU N H sing N N 254 LEU N H2 sing N N 255 LEU CA C sing N N 256 LEU CA CB sing N N 257 LEU CA HA sing N N 258 LEU C O doub N N 259 LEU C OXT sing N N 260 LEU CB CG sing N N 261 LEU CB HB2 sing N N 262 LEU CB HB3 sing N N 263 LEU CG CD1 sing N N 264 LEU CG CD2 sing N N 265 LEU CG HG sing N N 266 LEU CD1 HD11 sing N N 267 LEU CD1 HD12 sing N N 268 LEU CD1 HD13 sing N N 269 LEU CD2 HD21 sing N N 270 LEU CD2 HD22 sing N N 271 LEU CD2 HD23 sing N N 272 LEU OXT HXT sing N N 273 LYS N CA sing N N 274 LYS N H sing N N 275 LYS N H2 sing N N 276 LYS CA C sing N N 277 LYS CA CB sing N N 278 LYS CA HA sing N N 279 LYS C O doub N N 280 LYS C OXT sing N N 281 LYS CB CG sing N N 282 LYS CB HB2 sing N N 283 LYS CB HB3 sing N N 284 LYS CG CD sing N N 285 LYS CG HG2 sing N N 286 LYS CG HG3 sing N N 287 LYS CD CE sing N N 288 LYS CD HD2 sing N N 289 LYS CD HD3 sing N N 290 LYS CE NZ sing N N 291 LYS CE HE2 sing N N 292 LYS CE HE3 sing N N 293 LYS NZ HZ1 sing N N 294 LYS NZ HZ2 sing N N 295 LYS NZ HZ3 sing N N 296 LYS OXT HXT sing N N 297 MAN C1 C2 sing N N 298 MAN C1 O1 sing N N 299 MAN C1 O5 sing N N 300 MAN C1 H1 sing N N 301 MAN C2 C3 sing N N 302 MAN C2 O2 sing N N 303 MAN C2 H2 sing N N 304 MAN C3 C4 sing N N 305 MAN C3 O3 sing N N 306 MAN C3 H3 sing N N 307 MAN C4 C5 sing N N 308 MAN C4 O4 sing N N 309 MAN C4 H4 sing N N 310 MAN C5 C6 sing N N 311 MAN C5 O5 sing N N 312 MAN C5 H5 sing N N 313 MAN C6 O6 sing N N 314 MAN C6 H61 sing N N 315 MAN C6 H62 sing N N 316 MAN O1 HO1 sing N N 317 MAN O2 HO2 sing N N 318 MAN O3 HO3 sing N N 319 MAN O4 HO4 sing N N 320 MAN O6 HO6 sing N N 321 MET N CA sing N N 322 MET N H sing N N 323 MET N H2 sing N N 324 MET CA C sing N N 325 MET CA CB sing N N 326 MET CA HA sing N N 327 MET C O doub N N 328 MET C OXT sing N N 329 MET CB CG sing N N 330 MET CB HB2 sing N N 331 MET CB HB3 sing N N 332 MET CG SD sing N N 333 MET CG HG2 sing N N 334 MET CG HG3 sing N N 335 MET SD CE sing N N 336 MET CE HE1 sing N N 337 MET CE HE2 sing N N 338 MET CE HE3 sing N N 339 MET OXT HXT sing N N 340 NAG C1 C2 sing N N 341 NAG C1 O1 sing N N 342 NAG C1 O5 sing N N 343 NAG C1 H1 sing N N 344 NAG C2 C3 sing N N 345 NAG C2 N2 sing N N 346 NAG C2 H2 sing N N 347 NAG C3 C4 sing N N 348 NAG C3 O3 sing N N 349 NAG C3 H3 sing N N 350 NAG C4 C5 sing N N 351 NAG C4 O4 sing N N 352 NAG C4 H4 sing N N 353 NAG C5 C6 sing N N 354 NAG C5 O5 sing N N 355 NAG C5 H5 sing N N 356 NAG C6 O6 sing N N 357 NAG C6 H61 sing N N 358 NAG C6 H62 sing N N 359 NAG C7 C8 sing N N 360 NAG C7 N2 sing N N 361 NAG C7 O7 doub N N 362 NAG C8 H81 sing N N 363 NAG C8 H82 sing N N 364 NAG C8 H83 sing N N 365 NAG N2 HN2 sing N N 366 NAG O1 HO1 sing N N 367 NAG O3 HO3 sing N N 368 NAG O4 HO4 sing N N 369 NAG O6 HO6 sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 SER N CA sing N N 411 SER N H sing N N 412 SER N H2 sing N N 413 SER CA C sing N N 414 SER CA CB sing N N 415 SER CA HA sing N N 416 SER C O doub N N 417 SER C OXT sing N N 418 SER CB OG sing N N 419 SER CB HB2 sing N N 420 SER CB HB3 sing N N 421 SER OG HG sing N N 422 SER OXT HXT sing N N 423 THR N CA sing N N 424 THR N H sing N N 425 THR N H2 sing N N 426 THR CA C sing N N 427 THR CA CB sing N N 428 THR CA HA sing N N 429 THR C O doub N N 430 THR C OXT sing N N 431 THR CB OG1 sing N N 432 THR CB CG2 sing N N 433 THR CB HB sing N N 434 THR OG1 HG1 sing N N 435 THR CG2 HG21 sing N N 436 THR CG2 HG22 sing N N 437 THR CG2 HG23 sing N N 438 THR OXT HXT sing N N 439 TRP N CA sing N N 440 TRP N H sing N N 441 TRP N H2 sing N N 442 TRP CA C sing N N 443 TRP CA CB sing N N 444 TRP CA HA sing N N 445 TRP C O doub N N 446 TRP C OXT sing N N 447 TRP CB CG sing N N 448 TRP CB HB2 sing N N 449 TRP CB HB3 sing N N 450 TRP CG CD1 doub Y N 451 TRP CG CD2 sing Y N 452 TRP CD1 NE1 sing Y N 453 TRP CD1 HD1 sing N N 454 TRP CD2 CE2 doub Y N 455 TRP CD2 CE3 sing Y N 456 TRP NE1 CE2 sing Y N 457 TRP NE1 HE1 sing N N 458 TRP CE2 CZ2 sing Y N 459 TRP CE3 CZ3 doub Y N 460 TRP CE3 HE3 sing N N 461 TRP CZ2 CH2 doub Y N 462 TRP CZ2 HZ2 sing N N 463 TRP CZ3 CH2 sing Y N 464 TRP CZ3 HZ3 sing N N 465 TRP CH2 HH2 sing N N 466 TRP OXT HXT sing N N 467 TYR N CA sing N N 468 TYR N H sing N N 469 TYR N H2 sing N N 470 TYR CA C sing N N 471 TYR CA CB sing N N 472 TYR CA HA sing N N 473 TYR C O doub N N 474 TYR C OXT sing N N 475 TYR CB CG sing N N 476 TYR CB HB2 sing N N 477 TYR CB HB3 sing N N 478 TYR CG CD1 doub Y N 479 TYR CG CD2 sing Y N 480 TYR CD1 CE1 sing Y N 481 TYR CD1 HD1 sing N N 482 TYR CD2 CE2 doub Y N 483 TYR CD2 HD2 sing N N 484 TYR CE1 CZ doub Y N 485 TYR CE1 HE1 sing N N 486 TYR CE2 CZ sing Y N 487 TYR CE2 HE2 sing N N 488 TYR CZ OH sing N N 489 TYR OH HH sing N N 490 TYR OXT HXT sing N N 491 VAL N CA sing N N 492 VAL N H sing N N 493 VAL N H2 sing N N 494 VAL CA C sing N N 495 VAL CA CB sing N N 496 VAL CA HA sing N N 497 VAL C O doub N N 498 VAL C OXT sing N N 499 VAL CB CG1 sing N N 500 VAL CB CG2 sing N N 501 VAL CB HB sing N N 502 VAL CG1 HG11 sing N N 503 VAL CG1 HG12 sing N N 504 VAL CG1 HG13 sing N N 505 VAL CG2 HG21 sing N N 506 VAL CG2 HG22 sing N N 507 VAL CG2 HG23 sing N N 508 VAL OXT HXT sing N N 509 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n 2 MAN 6 n # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'TERN N9 NEURAMINIDASE' # _atom_sites.entry_id 1BJI _atom_sites.fract_transf_matrix[1][1] 0.005470 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005470 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005470 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_