data_1BPD
#
_entry.id 1BPD
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1BPD pdb_00001bpd 10.2210/pdb1bpd/pdb
WWPDB D_1000171979 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1994-06-22
2 'Structure model' 1 1 2008-03-24
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 4 'Structure model' Other
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' pdbx_database_status
5 4 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_pdbx_database_status.process_site'
4 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
5 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
6 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1BPD
_pdbx_database_status.recvd_initial_deposition_date 1994-04-12
_pdbx_database_status.deposit_site ?
_pdbx_database_status.process_site BNL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Sawaya, M.R.' 1
'Pelletier, H.' 2
'Kumar, A.' 3
'Wilson, S.H.' 4
'Kraut, J.' 5
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism.'
Science 264 1930 1935 1994 SCIEAS US 0036-8075 0038 ? 7516581 ?
1 'Structures of Ternary Complexes of Rat DNA Polymerase Beta, a DNA Template-Primer, and ddCTP'
Science 264 1891 ? 1994 SCIEAS US 0036-8075 0038 ? ? ?
2 'Studies of the Domain Structure of Mammalian DNA Polymerase Beta. Identification of a Discrete Template Binding Domain'
J.Biol.Chem. 265 2124 ? 1990 JBCHA3 US 0021-9258 0071 ? ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Sawaya, M.R.' 1 ?
primary 'Pelletier, H.' 2 ?
primary 'Kumar, A.' 3 ?
primary 'Wilson, S.H.' 4 ?
primary 'Kraut, J.' 5 ?
1 'Pelletier, H.' 6 ?
1 'Sawaya, M.R.' 7 ?
1 'Wilson, S.H.' 8 ?
1 'Kraut, J.' 9 ?
2 'Kumar, A.' 10 ?
2 'Widen, S.G.' 11 ?
2 'Williams, K.R.' 12 ?
2 'Kedar, P.' 13 ?
2 'Karpel, R.L.' 14 ?
2 'Wilson, S.H.' 15 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'DNA POLYMERASE BETA' 38388.762 1 2.7.7.7 ? ? ?
2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQD
IVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQ
LPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIF
DYIQWRYREPKDRSE
;
_entity_poly.pdbx_seq_one_letter_code_can
;MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQD
IVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQ
LPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIF
DYIQWRYREPKDRSE
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name 'PHOSPHATE ION'
_pdbx_entity_nonpoly.comp_id PO4
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 SER n
1 3 LYS n
1 4 ARG n
1 5 LYS n
1 6 ALA n
1 7 PRO n
1 8 GLN n
1 9 GLU n
1 10 THR n
1 11 LEU n
1 12 ASN n
1 13 GLY n
1 14 GLY n
1 15 ILE n
1 16 THR n
1 17 ASP n
1 18 MET n
1 19 LEU n
1 20 VAL n
1 21 GLU n
1 22 LEU n
1 23 ALA n
1 24 ASN n
1 25 PHE n
1 26 GLU n
1 27 LYS n
1 28 ASN n
1 29 VAL n
1 30 SER n
1 31 GLN n
1 32 ALA n
1 33 ILE n
1 34 HIS n
1 35 LYS n
1 36 TYR n
1 37 ASN n
1 38 ALA n
1 39 TYR n
1 40 ARG n
1 41 LYS n
1 42 ALA n
1 43 ALA n
1 44 SER n
1 45 VAL n
1 46 ILE n
1 47 ALA n
1 48 LYS n
1 49 TYR n
1 50 PRO n
1 51 HIS n
1 52 LYS n
1 53 ILE n
1 54 LYS n
1 55 SER n
1 56 GLY n
1 57 ALA n
1 58 GLU n
1 59 ALA n
1 60 LYS n
1 61 LYS n
1 62 LEU n
1 63 PRO n
1 64 GLY n
1 65 VAL n
1 66 GLY n
1 67 THR n
1 68 LYS n
1 69 ILE n
1 70 ALA n
1 71 GLU n
1 72 LYS n
1 73 ILE n
1 74 ASP n
1 75 GLU n
1 76 PHE n
1 77 LEU n
1 78 ALA n
1 79 THR n
1 80 GLY n
1 81 LYS n
1 82 LEU n
1 83 ARG n
1 84 LYS n
1 85 LEU n
1 86 GLU n
1 87 LYS n
1 88 ILE n
1 89 ARG n
1 90 GLN n
1 91 ASP n
1 92 ASP n
1 93 THR n
1 94 SER n
1 95 SER n
1 96 SER n
1 97 ILE n
1 98 ASN n
1 99 PHE n
1 100 LEU n
1 101 THR n
1 102 ARG n
1 103 VAL n
1 104 THR n
1 105 GLY n
1 106 ILE n
1 107 GLY n
1 108 PRO n
1 109 SER n
1 110 ALA n
1 111 ALA n
1 112 ARG n
1 113 LYS n
1 114 LEU n
1 115 VAL n
1 116 ASP n
1 117 GLU n
1 118 GLY n
1 119 ILE n
1 120 LYS n
1 121 THR n
1 122 LEU n
1 123 GLU n
1 124 ASP n
1 125 LEU n
1 126 ARG n
1 127 LYS n
1 128 ASN n
1 129 GLU n
1 130 ASP n
1 131 LYS n
1 132 LEU n
1 133 ASN n
1 134 HIS n
1 135 HIS n
1 136 GLN n
1 137 ARG n
1 138 ILE n
1 139 GLY n
1 140 LEU n
1 141 LYS n
1 142 TYR n
1 143 PHE n
1 144 GLU n
1 145 ASP n
1 146 PHE n
1 147 GLU n
1 148 LYS n
1 149 ARG n
1 150 ILE n
1 151 PRO n
1 152 ARG n
1 153 GLU n
1 154 GLU n
1 155 MET n
1 156 LEU n
1 157 GLN n
1 158 MET n
1 159 GLN n
1 160 ASP n
1 161 ILE n
1 162 VAL n
1 163 LEU n
1 164 ASN n
1 165 GLU n
1 166 VAL n
1 167 LYS n
1 168 LYS n
1 169 LEU n
1 170 ASP n
1 171 PRO n
1 172 GLU n
1 173 TYR n
1 174 ILE n
1 175 ALA n
1 176 THR n
1 177 VAL n
1 178 CYS n
1 179 GLY n
1 180 SER n
1 181 PHE n
1 182 ARG n
1 183 ARG n
1 184 GLY n
1 185 ALA n
1 186 GLU n
1 187 SER n
1 188 SER n
1 189 GLY n
1 190 ASP n
1 191 MET n
1 192 ASP n
1 193 VAL n
1 194 LEU n
1 195 LEU n
1 196 THR n
1 197 HIS n
1 198 PRO n
1 199 ASN n
1 200 PHE n
1 201 THR n
1 202 SER n
1 203 GLU n
1 204 SER n
1 205 SER n
1 206 LYS n
1 207 GLN n
1 208 PRO n
1 209 LYS n
1 210 LEU n
1 211 LEU n
1 212 HIS n
1 213 ARG n
1 214 VAL n
1 215 VAL n
1 216 GLU n
1 217 GLN n
1 218 LEU n
1 219 GLN n
1 220 LYS n
1 221 VAL n
1 222 ARG n
1 223 PHE n
1 224 ILE n
1 225 THR n
1 226 ASP n
1 227 THR n
1 228 LEU n
1 229 SER n
1 230 LYS n
1 231 GLY n
1 232 GLU n
1 233 THR n
1 234 LYS n
1 235 PHE n
1 236 MET n
1 237 GLY n
1 238 VAL n
1 239 CYS n
1 240 GLN n
1 241 LEU n
1 242 PRO n
1 243 SER n
1 244 GLU n
1 245 ASN n
1 246 ASP n
1 247 GLU n
1 248 ASN n
1 249 GLU n
1 250 TYR n
1 251 PRO n
1 252 HIS n
1 253 ARG n
1 254 ARG n
1 255 ILE n
1 256 ASP n
1 257 ILE n
1 258 ARG n
1 259 LEU n
1 260 ILE n
1 261 PRO n
1 262 LYS n
1 263 ASP n
1 264 GLN n
1 265 TYR n
1 266 TYR n
1 267 CYS n
1 268 GLY n
1 269 VAL n
1 270 LEU n
1 271 TYR n
1 272 PHE n
1 273 THR n
1 274 GLY n
1 275 SER n
1 276 ASP n
1 277 ILE n
1 278 PHE n
1 279 ASN n
1 280 LYS n
1 281 ASN n
1 282 MET n
1 283 ARG n
1 284 ALA n
1 285 HIS n
1 286 ALA n
1 287 LEU n
1 288 GLU n
1 289 LYS n
1 290 GLY n
1 291 PHE n
1 292 THR n
1 293 ILE n
1 294 ASN n
1 295 GLU n
1 296 TYR n
1 297 THR n
1 298 ILE n
1 299 ARG n
1 300 PRO n
1 301 LEU n
1 302 GLY n
1 303 VAL n
1 304 THR n
1 305 GLY n
1 306 VAL n
1 307 ALA n
1 308 GLY n
1 309 GLU n
1 310 PRO n
1 311 LEU n
1 312 PRO n
1 313 VAL n
1 314 ASP n
1 315 SER n
1 316 GLU n
1 317 GLN n
1 318 ASP n
1 319 ILE n
1 320 PHE n
1 321 ASP n
1 322 TYR n
1 323 ILE n
1 324 GLN n
1 325 TRP n
1 326 ARG n
1 327 TYR n
1 328 ARG n
1 329 GLU n
1 330 PRO n
1 331 LYS n
1 332 ASP n
1 333 ARG n
1 334 SER n
1 335 GLU n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name 'Norway rat'
_entity_src_gen.gene_src_genus Rattus
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name ?
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ?
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 1 ? ? ? A . n
A 1 2 SER 2 2 ? ? ? A . n
A 1 3 LYS 3 3 ? ? ? A . n
A 1 4 ARG 4 4 ? ? ? A . n
A 1 5 LYS 5 5 ? ? ? A . n
A 1 6 ALA 6 6 ? ? ? A . n
A 1 7 PRO 7 7 ? ? ? A . n
A 1 8 GLN 8 8 ? ? ? A . n
A 1 9 GLU 9 9 9 GLU GLU A . n
A 1 10 THR 10 10 10 THR THR A . n
A 1 11 LEU 11 11 11 LEU LEU A . n
A 1 12 ASN 12 12 12 ASN ASN A . n
A 1 13 GLY 13 13 13 GLY GLY A . n
A 1 14 GLY 14 14 14 GLY GLY A . n
A 1 15 ILE 15 15 15 ILE ILE A . n
A 1 16 THR 16 16 16 THR THR A . n
A 1 17 ASP 17 17 17 ASP ASP A . n
A 1 18 MET 18 18 18 MET MET A . n
A 1 19 LEU 19 19 19 LEU LEU A . n
A 1 20 VAL 20 20 20 VAL VAL A . n
A 1 21 GLU 21 21 21 GLU GLU A . n
A 1 22 LEU 22 22 22 LEU LEU A . n
A 1 23 ALA 23 23 23 ALA ALA A . n
A 1 24 ASN 24 24 24 ASN ASN A . n
A 1 25 PHE 25 25 25 PHE PHE A . n
A 1 26 GLU 26 26 26 GLU GLU A . n
A 1 27 LYS 27 27 27 LYS LYS A . n
A 1 28 ASN 28 28 28 ASN ASN A . n
A 1 29 VAL 29 29 29 VAL VAL A . n
A 1 30 SER 30 30 30 SER SER A . n
A 1 31 GLN 31 31 31 GLN GLN A . n
A 1 32 ALA 32 32 32 ALA ALA A . n
A 1 33 ILE 33 33 33 ILE ILE A . n
A 1 34 HIS 34 34 34 HIS HIS A . n
A 1 35 LYS 35 35 35 LYS LYS A . n
A 1 36 TYR 36 36 36 TYR TYR A . n
A 1 37 ASN 37 37 37 ASN ASN A . n
A 1 38 ALA 38 38 38 ALA ALA A . n
A 1 39 TYR 39 39 39 TYR TYR A . n
A 1 40 ARG 40 40 40 ARG ARG A . n
A 1 41 LYS 41 41 41 LYS LYS A . n
A 1 42 ALA 42 42 42 ALA ALA A . n
A 1 43 ALA 43 43 43 ALA ALA A . n
A 1 44 SER 44 44 44 SER SER A . n
A 1 45 VAL 45 45 45 VAL VAL A . n
A 1 46 ILE 46 46 46 ILE ILE A . n
A 1 47 ALA 47 47 47 ALA ALA A . n
A 1 48 LYS 48 48 48 LYS LYS A . n
A 1 49 TYR 49 49 49 TYR TYR A . n
A 1 50 PRO 50 50 50 PRO PRO A . n
A 1 51 HIS 51 51 51 HIS HIS A . n
A 1 52 LYS 52 52 52 LYS LYS A . n
A 1 53 ILE 53 53 53 ILE ILE A . n
A 1 54 LYS 54 54 54 LYS LYS A . n
A 1 55 SER 55 55 55 SER SER A . n
A 1 56 GLY 56 56 56 GLY GLY A . n
A 1 57 ALA 57 57 57 ALA ALA A . n
A 1 58 GLU 58 58 58 GLU GLU A . n
A 1 59 ALA 59 59 59 ALA ALA A . n
A 1 60 LYS 60 60 60 LYS LYS A . n
A 1 61 LYS 61 61 61 LYS LYS A . n
A 1 62 LEU 62 62 62 LEU LEU A . n
A 1 63 PRO 63 63 63 PRO PRO A . n
A 1 64 GLY 64 64 64 GLY GLY A . n
A 1 65 VAL 65 65 65 VAL VAL A . n
A 1 66 GLY 66 66 66 GLY GLY A . n
A 1 67 THR 67 67 67 THR THR A . n
A 1 68 LYS 68 68 68 LYS LYS A . n
A 1 69 ILE 69 69 69 ILE ILE A . n
A 1 70 ALA 70 70 70 ALA ALA A . n
A 1 71 GLU 71 71 71 GLU GLU A . n
A 1 72 LYS 72 72 72 LYS LYS A . n
A 1 73 ILE 73 73 73 ILE ILE A . n
A 1 74 ASP 74 74 74 ASP ASP A . n
A 1 75 GLU 75 75 75 GLU GLU A . n
A 1 76 PHE 76 76 76 PHE PHE A . n
A 1 77 LEU 77 77 77 LEU LEU A . n
A 1 78 ALA 78 78 78 ALA ALA A . n
A 1 79 THR 79 79 79 THR THR A . n
A 1 80 GLY 80 80 80 GLY GLY A . n
A 1 81 LYS 81 81 81 LYS LYS A . n
A 1 82 LEU 82 82 82 LEU LEU A . n
A 1 83 ARG 83 83 83 ARG ARG A . n
A 1 84 LYS 84 84 84 LYS LYS A . n
A 1 85 LEU 85 85 85 LEU LEU A . n
A 1 86 GLU 86 86 86 GLU GLU A . n
A 1 87 LYS 87 87 87 LYS LYS A . n
A 1 88 ILE 88 88 88 ILE ILE A . n
A 1 89 ARG 89 89 89 ARG ARG A . n
A 1 90 GLN 90 90 90 GLN GLN A . n
A 1 91 ASP 91 91 91 ASP ASP A . n
A 1 92 ASP 92 92 92 ASP ASP A . n
A 1 93 THR 93 93 93 THR THR A . n
A 1 94 SER 94 94 94 SER SER A . n
A 1 95 SER 95 95 95 SER SER A . n
A 1 96 SER 96 96 96 SER SER A . n
A 1 97 ILE 97 97 97 ILE ILE A . n
A 1 98 ASN 98 98 98 ASN ASN A . n
A 1 99 PHE 99 99 99 PHE PHE A . n
A 1 100 LEU 100 100 100 LEU LEU A . n
A 1 101 THR 101 101 101 THR THR A . n
A 1 102 ARG 102 102 102 ARG ARG A . n
A 1 103 VAL 103 103 103 VAL VAL A . n
A 1 104 THR 104 104 104 THR THR A . n
A 1 105 GLY 105 105 105 GLY GLY A . n
A 1 106 ILE 106 106 106 ILE ILE A . n
A 1 107 GLY 107 107 107 GLY GLY A . n
A 1 108 PRO 108 108 108 PRO PRO A . n
A 1 109 SER 109 109 109 SER SER A . n
A 1 110 ALA 110 110 110 ALA ALA A . n
A 1 111 ALA 111 111 111 ALA ALA A . n
A 1 112 ARG 112 112 112 ARG ARG A . n
A 1 113 LYS 113 113 113 LYS LYS A . n
A 1 114 LEU 114 114 114 LEU LEU A . n
A 1 115 VAL 115 115 115 VAL VAL A . n
A 1 116 ASP 116 116 116 ASP ASP A . n
A 1 117 GLU 117 117 117 GLU GLU A . n
A 1 118 GLY 118 118 118 GLY GLY A . n
A 1 119 ILE 119 119 119 ILE ILE A . n
A 1 120 LYS 120 120 120 LYS LYS A . n
A 1 121 THR 121 121 121 THR THR A . n
A 1 122 LEU 122 122 122 LEU LEU A . n
A 1 123 GLU 123 123 123 GLU GLU A . n
A 1 124 ASP 124 124 124 ASP ASP A . n
A 1 125 LEU 125 125 125 LEU LEU A . n
A 1 126 ARG 126 126 126 ARG ARG A . n
A 1 127 LYS 127 127 127 LYS LYS A . n
A 1 128 ASN 128 128 128 ASN ASN A . n
A 1 129 GLU 129 129 129 GLU GLU A . n
A 1 130 ASP 130 130 130 ASP ASP A . n
A 1 131 LYS 131 131 131 LYS LYS A . n
A 1 132 LEU 132 132 132 LEU LEU A . n
A 1 133 ASN 133 133 133 ASN ASN A . n
A 1 134 HIS 134 134 134 HIS HIS A . n
A 1 135 HIS 135 135 135 HIS HIS A . n
A 1 136 GLN 136 136 136 GLN GLN A . n
A 1 137 ARG 137 137 137 ARG ARG A . n
A 1 138 ILE 138 138 138 ILE ILE A . n
A 1 139 GLY 139 139 139 GLY GLY A . n
A 1 140 LEU 140 140 140 LEU LEU A . n
A 1 141 LYS 141 141 141 LYS LYS A . n
A 1 142 TYR 142 142 142 TYR TYR A . n
A 1 143 PHE 143 143 143 PHE PHE A . n
A 1 144 GLU 144 144 144 GLU GLU A . n
A 1 145 ASP 145 145 145 ASP ASP A . n
A 1 146 PHE 146 146 146 PHE PHE A . n
A 1 147 GLU 147 147 147 GLU GLU A . n
A 1 148 LYS 148 148 148 LYS LYS A . n
A 1 149 ARG 149 149 149 ARG ARG A . n
A 1 150 ILE 150 150 150 ILE ILE A . n
A 1 151 PRO 151 151 151 PRO PRO A . n
A 1 152 ARG 152 152 152 ARG ARG A . n
A 1 153 GLU 153 153 153 GLU GLU A . n
A 1 154 GLU 154 154 154 GLU GLU A . n
A 1 155 MET 155 155 155 MET MET A . n
A 1 156 LEU 156 156 156 LEU LEU A . n
A 1 157 GLN 157 157 157 GLN GLN A . n
A 1 158 MET 158 158 158 MET MET A . n
A 1 159 GLN 159 159 159 GLN GLN A . n
A 1 160 ASP 160 160 160 ASP ASP A . n
A 1 161 ILE 161 161 161 ILE ILE A . n
A 1 162 VAL 162 162 162 VAL VAL A . n
A 1 163 LEU 163 163 163 LEU LEU A . n
A 1 164 ASN 164 164 164 ASN ASN A . n
A 1 165 GLU 165 165 165 GLU GLU A . n
A 1 166 VAL 166 166 166 VAL VAL A . n
A 1 167 LYS 167 167 167 LYS LYS A . n
A 1 168 LYS 168 168 168 LYS LYS A . n
A 1 169 LEU 169 169 169 LEU LEU A . n
A 1 170 ASP 170 170 170 ASP ASP A . n
A 1 171 PRO 171 171 171 PRO PRO A . n
A 1 172 GLU 172 172 172 GLU GLU A . n
A 1 173 TYR 173 173 173 TYR TYR A . n
A 1 174 ILE 174 174 174 ILE ILE A . n
A 1 175 ALA 175 175 175 ALA ALA A . n
A 1 176 THR 176 176 176 THR THR A . n
A 1 177 VAL 177 177 177 VAL VAL A . n
A 1 178 CYS 178 178 178 CYS CYS A . n
A 1 179 GLY 179 179 179 GLY GLY A . n
A 1 180 SER 180 180 180 SER SER A . n
A 1 181 PHE 181 181 181 PHE PHE A . n
A 1 182 ARG 182 182 182 ARG ARG A . n
A 1 183 ARG 183 183 183 ARG ARG A . n
A 1 184 GLY 184 184 184 GLY GLY A . n
A 1 185 ALA 185 185 185 ALA ALA A . n
A 1 186 GLU 186 186 186 GLU GLU A . n
A 1 187 SER 187 187 187 SER SER A . n
A 1 188 SER 188 188 188 SER SER A . n
A 1 189 GLY 189 189 189 GLY GLY A . n
A 1 190 ASP 190 190 190 ASP ASP A . n
A 1 191 MET 191 191 191 MET MET A . n
A 1 192 ASP 192 192 192 ASP ASP A . n
A 1 193 VAL 193 193 193 VAL VAL A . n
A 1 194 LEU 194 194 194 LEU LEU A . n
A 1 195 LEU 195 195 195 LEU LEU A . n
A 1 196 THR 196 196 196 THR THR A . n
A 1 197 HIS 197 197 197 HIS HIS A . n
A 1 198 PRO 198 198 198 PRO PRO A . n
A 1 199 ASN 199 199 199 ASN ASN A . n
A 1 200 PHE 200 200 200 PHE PHE A . n
A 1 201 THR 201 201 201 THR THR A . n
A 1 202 SER 202 202 202 SER SER A . n
A 1 203 GLU 203 203 203 GLU GLU A . n
A 1 204 SER 204 204 204 SER SER A . n
A 1 205 SER 205 205 205 SER SER A . n
A 1 206 LYS 206 206 206 LYS LYS A . n
A 1 207 GLN 207 207 207 GLN GLN A . n
A 1 208 PRO 208 208 208 PRO PRO A . n
A 1 209 LYS 209 209 209 LYS LYS A . n
A 1 210 LEU 210 210 210 LEU LEU A . n
A 1 211 LEU 211 211 211 LEU LEU A . n
A 1 212 HIS 212 212 212 HIS HIS A . n
A 1 213 ARG 213 213 213 ARG ARG A . n
A 1 214 VAL 214 214 214 VAL VAL A . n
A 1 215 VAL 215 215 215 VAL VAL A . n
A 1 216 GLU 216 216 216 GLU GLU A . n
A 1 217 GLN 217 217 217 GLN GLN A . n
A 1 218 LEU 218 218 218 LEU LEU A . n
A 1 219 GLN 219 219 219 GLN GLN A . n
A 1 220 LYS 220 220 220 LYS LYS A . n
A 1 221 VAL 221 221 221 VAL VAL A . n
A 1 222 ARG 222 222 222 ARG ARG A . n
A 1 223 PHE 223 223 223 PHE PHE A . n
A 1 224 ILE 224 224 224 ILE ILE A . n
A 1 225 THR 225 225 225 THR THR A . n
A 1 226 ASP 226 226 226 ASP ASP A . n
A 1 227 THR 227 227 227 THR THR A . n
A 1 228 LEU 228 228 228 LEU LEU A . n
A 1 229 SER 229 229 229 SER SER A . n
A 1 230 LYS 230 230 230 LYS LYS A . n
A 1 231 GLY 231 231 231 GLY GLY A . n
A 1 232 GLU 232 232 232 GLU GLU A . n
A 1 233 THR 233 233 233 THR THR A . n
A 1 234 LYS 234 234 234 LYS LYS A . n
A 1 235 PHE 235 235 235 PHE PHE A . n
A 1 236 MET 236 236 236 MET MET A . n
A 1 237 GLY 237 237 237 GLY GLY A . n
A 1 238 VAL 238 238 238 VAL VAL A . n
A 1 239 CYS 239 239 239 CYS CYS A . n
A 1 240 GLN 240 240 240 GLN GLN A . n
A 1 241 LEU 241 241 241 LEU LEU A . n
A 1 242 PRO 242 242 242 PRO PRO A . n
A 1 243 SER 243 243 243 SER SER A . n
A 1 244 GLU 244 244 244 GLU GLU A . n
A 1 245 ASN 245 245 245 ASN ASN A . n
A 1 246 ASP 246 246 ? ? ? A . n
A 1 247 GLU 247 247 ? ? ? A . n
A 1 248 ASN 248 248 ? ? ? A . n
A 1 249 GLU 249 249 249 GLU GLU A . n
A 1 250 TYR 250 250 250 TYR TYR A . n
A 1 251 PRO 251 251 251 PRO PRO A . n
A 1 252 HIS 252 252 252 HIS HIS A . n
A 1 253 ARG 253 253 253 ARG ARG A . n
A 1 254 ARG 254 254 254 ARG ARG A . n
A 1 255 ILE 255 255 255 ILE ILE A . n
A 1 256 ASP 256 256 256 ASP ASP A . n
A 1 257 ILE 257 257 257 ILE ILE A . n
A 1 258 ARG 258 258 258 ARG ARG A . n
A 1 259 LEU 259 259 259 LEU LEU A . n
A 1 260 ILE 260 260 260 ILE ILE A . n
A 1 261 PRO 261 261 261 PRO PRO A . n
A 1 262 LYS 262 262 262 LYS LYS A . n
A 1 263 ASP 263 263 263 ASP ASP A . n
A 1 264 GLN 264 264 264 GLN GLN A . n
A 1 265 TYR 265 265 265 TYR TYR A . n
A 1 266 TYR 266 266 266 TYR TYR A . n
A 1 267 CYS 267 267 267 CYS CYS A . n
A 1 268 GLY 268 268 268 GLY GLY A . n
A 1 269 VAL 269 269 269 VAL VAL A . n
A 1 270 LEU 270 270 270 LEU LEU A . n
A 1 271 TYR 271 271 271 TYR TYR A . n
A 1 272 PHE 272 272 272 PHE PHE A . n
A 1 273 THR 273 273 273 THR THR A . n
A 1 274 GLY 274 274 274 GLY GLY A . n
A 1 275 SER 275 275 275 SER SER A . n
A 1 276 ASP 276 276 276 ASP ASP A . n
A 1 277 ILE 277 277 277 ILE ILE A . n
A 1 278 PHE 278 278 278 PHE PHE A . n
A 1 279 ASN 279 279 279 ASN ASN A . n
A 1 280 LYS 280 280 280 LYS LYS A . n
A 1 281 ASN 281 281 281 ASN ASN A . n
A 1 282 MET 282 282 282 MET MET A . n
A 1 283 ARG 283 283 283 ARG ARG A . n
A 1 284 ALA 284 284 284 ALA ALA A . n
A 1 285 HIS 285 285 285 HIS HIS A . n
A 1 286 ALA 286 286 286 ALA ALA A . n
A 1 287 LEU 287 287 287 LEU LEU A . n
A 1 288 GLU 288 288 288 GLU GLU A . n
A 1 289 LYS 289 289 289 LYS LYS A . n
A 1 290 GLY 290 290 290 GLY GLY A . n
A 1 291 PHE 291 291 291 PHE PHE A . n
A 1 292 THR 292 292 292 THR THR A . n
A 1 293 ILE 293 293 293 ILE ILE A . n
A 1 294 ASN 294 294 294 ASN ASN A . n
A 1 295 GLU 295 295 295 GLU GLU A . n
A 1 296 TYR 296 296 296 TYR TYR A . n
A 1 297 THR 297 297 297 THR THR A . n
A 1 298 ILE 298 298 298 ILE ILE A . n
A 1 299 ARG 299 299 299 ARG ARG A . n
A 1 300 PRO 300 300 300 PRO PRO A . n
A 1 301 LEU 301 301 301 LEU LEU A . n
A 1 302 GLY 302 302 302 GLY GLY A . n
A 1 303 VAL 303 303 303 VAL VAL A . n
A 1 304 THR 304 304 304 THR THR A . n
A 1 305 GLY 305 305 305 GLY GLY A . n
A 1 306 VAL 306 306 306 VAL VAL A . n
A 1 307 ALA 307 307 307 ALA ALA A . n
A 1 308 GLY 308 308 308 GLY GLY A . n
A 1 309 GLU 309 309 309 GLU GLU A . n
A 1 310 PRO 310 310 310 PRO PRO A . n
A 1 311 LEU 311 311 311 LEU LEU A . n
A 1 312 PRO 312 312 312 PRO PRO A . n
A 1 313 VAL 313 313 313 VAL VAL A . n
A 1 314 ASP 314 314 314 ASP ASP A . n
A 1 315 SER 315 315 315 SER SER A . n
A 1 316 GLU 316 316 316 GLU GLU A . n
A 1 317 GLN 317 317 317 GLN GLN A . n
A 1 318 ASP 318 318 318 ASP ASP A . n
A 1 319 ILE 319 319 319 ILE ILE A . n
A 1 320 PHE 320 320 320 PHE PHE A . n
A 1 321 ASP 321 321 321 ASP ASP A . n
A 1 322 TYR 322 322 322 TYR TYR A . n
A 1 323 ILE 323 323 323 ILE ILE A . n
A 1 324 GLN 324 324 324 GLN GLN A . n
A 1 325 TRP 325 325 325 TRP TRP A . n
A 1 326 ARG 326 326 326 ARG ARG A . n
A 1 327 TYR 327 327 327 TYR TYR A . n
A 1 328 ARG 328 328 328 ARG ARG A . n
A 1 329 GLU 329 329 329 GLU GLU A . n
A 1 330 PRO 330 330 330 PRO PRO A . n
A 1 331 LYS 331 331 331 LYS LYS A . n
A 1 332 ASP 332 332 332 ASP ASP A . n
A 1 333 ARG 333 333 333 ARG ARG A . n
A 1 334 SER 334 334 334 SER SER A . n
A 1 335 GLU 335 335 335 GLU GLU A . n
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id PO4
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 337
_pdbx_nonpoly_scheme.auth_seq_num 337
_pdbx_nonpoly_scheme.pdb_mon_id PO4
_pdbx_nonpoly_scheme.auth_mon_id PO4
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A PHE 25 ? CG ? A PHE 25 CG
2 1 Y 1 A PHE 25 ? CD1 ? A PHE 25 CD1
3 1 Y 1 A PHE 25 ? CD2 ? A PHE 25 CD2
4 1 Y 1 A PHE 25 ? CE1 ? A PHE 25 CE1
5 1 Y 1 A PHE 25 ? CE2 ? A PHE 25 CE2
6 1 Y 1 A PHE 25 ? CZ ? A PHE 25 CZ
7 1 Y 1 A ASN 28 ? CG ? A ASN 28 CG
8 1 Y 1 A ASN 28 ? OD1 ? A ASN 28 OD1
9 1 Y 1 A ASN 28 ? ND2 ? A ASN 28 ND2
10 1 Y 1 A SER 55 ? OG ? A SER 55 OG
11 1 Y 1 A LYS 60 ? CG ? A LYS 60 CG
12 1 Y 1 A LYS 60 ? CD ? A LYS 60 CD
13 1 Y 1 A LYS 60 ? CE ? A LYS 60 CE
14 1 Y 1 A LYS 60 ? NZ ? A LYS 60 NZ
15 1 Y 1 A LYS 68 ? CG ? A LYS 68 CG
16 1 Y 1 A LYS 68 ? CD ? A LYS 68 CD
17 1 Y 1 A LYS 68 ? CE ? A LYS 68 CE
18 1 Y 1 A LYS 68 ? NZ ? A LYS 68 NZ
19 1 Y 1 A GLU 71 ? CG ? A GLU 71 CG
20 1 Y 1 A GLU 71 ? CD ? A GLU 71 CD
21 1 Y 1 A GLU 71 ? OE1 ? A GLU 71 OE1
22 1 Y 1 A GLU 71 ? OE2 ? A GLU 71 OE2
23 1 Y 1 A LYS 72 ? CG ? A LYS 72 CG
24 1 Y 1 A LYS 72 ? CD ? A LYS 72 CD
25 1 Y 1 A LYS 72 ? CE ? A LYS 72 CE
26 1 Y 1 A LYS 72 ? NZ ? A LYS 72 NZ
27 1 Y 1 A LYS 81 ? CG ? A LYS 81 CG
28 1 Y 1 A LYS 81 ? CD ? A LYS 81 CD
29 1 Y 1 A LYS 81 ? CE ? A LYS 81 CE
30 1 Y 1 A LYS 81 ? NZ ? A LYS 81 NZ
31 1 Y 1 A LEU 82 ? CG ? A LEU 82 CG
32 1 Y 1 A LEU 82 ? CD1 ? A LEU 82 CD1
33 1 Y 1 A LEU 82 ? CD2 ? A LEU 82 CD2
34 1 Y 1 A GLN 90 ? CG ? A GLN 90 CG
35 1 Y 1 A GLN 90 ? CD ? A GLN 90 CD
36 1 Y 1 A GLN 90 ? OE1 ? A GLN 90 OE1
37 1 Y 1 A GLN 90 ? NE2 ? A GLN 90 NE2
38 1 Y 1 A ASP 92 ? CG ? A ASP 92 CG
39 1 Y 1 A ASP 92 ? OD1 ? A ASP 92 OD1
40 1 Y 1 A ASP 92 ? OD2 ? A ASP 92 OD2
41 1 Y 1 A SER 109 ? OG ? A SER 109 OG
42 1 Y 1 A ILE 119 ? CG1 ? A ILE 119 CG1
43 1 Y 1 A ILE 119 ? CG2 ? A ILE 119 CG2
44 1 Y 1 A ILE 119 ? CD1 ? A ILE 119 CD1
45 1 Y 1 A GLU 123 ? CG ? A GLU 123 CG
46 1 Y 1 A GLU 123 ? CD ? A GLU 123 CD
47 1 Y 1 A GLU 123 ? OE1 ? A GLU 123 OE1
48 1 Y 1 A GLU 123 ? OE2 ? A GLU 123 OE2
49 1 Y 1 A LYS 131 ? CG ? A LYS 131 CG
50 1 Y 1 A LYS 131 ? CD ? A LYS 131 CD
51 1 Y 1 A LYS 131 ? CE ? A LYS 131 CE
52 1 Y 1 A LYS 131 ? NZ ? A LYS 131 NZ
53 1 Y 1 A LYS 220 ? CG ? A LYS 220 CG
54 1 Y 1 A LYS 220 ? CD ? A LYS 220 CD
55 1 Y 1 A LYS 220 ? CE ? A LYS 220 CE
56 1 Y 1 A LYS 220 ? NZ ? A LYS 220 NZ
57 1 Y 1 A SER 243 ? OG ? A SER 243 OG
58 1 Y 1 A GLU 244 ? CG ? A GLU 244 CG
59 1 Y 1 A GLU 244 ? CD ? A GLU 244 CD
60 1 Y 1 A GLU 244 ? OE1 ? A GLU 244 OE1
61 1 Y 1 A GLU 244 ? OE2 ? A GLU 244 OE2
62 1 Y 1 A ASN 245 ? CG ? A ASN 245 CG
63 1 Y 1 A ASN 245 ? OD1 ? A ASN 245 OD1
64 1 Y 1 A ASN 245 ? ND2 ? A ASN 245 ND2
65 1 Y 1 A LYS 280 ? CG ? A LYS 280 CG
66 1 Y 1 A LYS 280 ? CD ? A LYS 280 CD
67 1 Y 1 A LYS 280 ? CE ? A LYS 280 CE
68 1 Y 1 A LYS 280 ? NZ ? A LYS 280 NZ
69 1 Y 1 A VAL 303 ? CG1 ? A VAL 303 CG1
70 1 Y 1 A VAL 303 ? CG2 ? A VAL 303 CG2
71 1 Y 1 A THR 304 ? OG1 ? A THR 304 OG1
72 1 Y 1 A THR 304 ? CG2 ? A THR 304 CG2
73 1 Y 1 A VAL 306 ? CG1 ? A VAL 306 CG1
74 1 Y 1 A VAL 306 ? CG2 ? A VAL 306 CG2
75 1 Y 1 A ARG 326 ? CG ? A ARG 326 CG
76 1 Y 1 A ARG 326 ? CD ? A ARG 326 CD
77 1 Y 1 A ARG 326 ? NE ? A ARG 326 NE
78 1 Y 1 A ARG 326 ? CZ ? A ARG 326 CZ
79 1 Y 1 A ARG 326 ? NH1 ? A ARG 326 NH1
80 1 Y 1 A ARG 326 ? NH2 ? A ARG 326 NH2
#
_software.name TNT
_software.classification refinement
_software.version .
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 1BPD
_cell.length_a 39.499
_cell.length_b 68.166
_cell.length_c 75.280
_cell.angle_alpha 90.00
_cell.angle_beta 91.68
_cell.angle_gamma 90.00
_cell.Z_PDB 2
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1BPD
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
#
_exptl.entry_id 1BPD
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.64
_exptl_crystal.density_percent_sol 53.37
_exptl_crystal.description ?
#
_diffrn.id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l ?
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_refine.entry_id 1BPD
_refine.ls_number_reflns_obs 4153
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 20.
_refine.ls_d_res_high 3.60
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs 0.1930000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 2528
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 5
_refine_hist.number_atoms_solvent 0
_refine_hist.number_atoms_total 2533
_refine_hist.d_res_high 3.60
_refine_hist.d_res_low 20.
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
t_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ?
t_angle_deg 2.9 ? ? ? 'X-RAY DIFFRACTION' ?
t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ?
t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ?
t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ?
t_gen_planes ? ? ? ? 'X-RAY DIFFRACTION' ?
t_it ? ? ? ? 'X-RAY DIFFRACTION' ?
t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 1BPD
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1BPD
_struct.title 'CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1BPD
_struct_keywords.pdbx_keywords NUCLEOTIDYLTRANSFERASE
_struct_keywords.text NUCLEOTIDYLTRANSFERASE
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code DPOB_RAT
_struct_ref.entity_id 1
_struct_ref.pdbx_db_accession P06766
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_seq_one_letter_code
;SKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGK
LRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDI
VLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQL
PSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIFD
YIQWRYREPKDRSE
;
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 1BPD
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 2
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 335
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P06766
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 334
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 2
_struct_ref_seq.pdbx_auth_seq_align_end 335
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASN A 12 ? SER A 30 ? ASN A 12 SER A 30 1 ? 19
HELX_P HELX_P2 2 ALA A 32 ? TYR A 49 ? ALA A 32 TYR A 49 1 ? 18
HELX_P HELX_P3 3 SER A 55 ? LEU A 62 ? SER A 55 LEU A 62 1 ? 8
HELX_P HELX_P4 4 GLY A 66 ? THR A 79 ? GLY A 66 THR A 79 1 ? 14
HELX_P HELX_P5 5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10
HELX_P HELX_P6 6 ASP A 92 ? VAL A 103 ? ASP A 92 VAL A 103 1 ? 12
HELX_P HELX_P7 7 GLY A 107 ? ASP A 116 ? GLY A 107 ASP A 116 1 ? 10
HELX_P HELX_P8 8 THR A 121 ? ARG A 126 ? THR A 121 ARG A 126 1 ? 6
HELX_P HELX_P9 9 ASN A 128 ? LEU A 132 ? ASN A 128 LEU A 132 5 ? 5
HELX_P HELX_P10 10 ASN A 133 ? PHE A 143 ? ASN A 133 PHE A 143 1 ? 11
HELX_P HELX_P11 11 TYR A 142 ? GLU A 147 ? TYR A 142 GLU A 147 1 ? 6
HELX_P HELX_P12 12 PRO A 151 ? ASP A 170 ? PRO A 151 ASP A 170 1 ? 20
HELX_P HELX_P13 13 PRO A 208 ? VAL A 221 ? PRO A 208 VAL A 221 1 ? 14
HELX_P HELX_P14 14 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11
HELX_P HELX_P15 15 SER A 275 ? LYS A 289 ? SER A 275 LYS A 289 1 ? 15
HELX_P HELX_P16 16 SER A 315 ? ILE A 323 ? SER A 315 ILE A 323 1 ? 9
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 5 ?
B ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
B 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 ILE A 174 ? VAL A 177 ? ILE A 174 VAL A 177
A 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196
A 3 HIS A 252 ? LEU A 259 ? HIS A 252 LEU A 259
A 4 LYS A 234 ? GLN A 240 ? LYS A 234 GLN A 240
A 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230
B 1 PHE A 291 ? ASN A 294 ? PHE A 291 ASN A 294
B 2 THR A 297 ? PRO A 300 ? THR A 297 PRO A 300
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 O THR A 176 ? O THR A 176 N LEU A 194 ? N LEU A 194
A 2 3 N MET A 191 ? N MET A 191 O ARG A 254 ? O ARG A 254
A 3 4 N ILE A 257 ? N ILE A 257 O PHE A 235 ? O PHE A 235
A 4 5 O VAL A 238 ? O VAL A 238 N THR A 225 ? N THR A 225
B 1 2 O ASN A 294 ? O ASN A 294 N THR A 297 ? N THR A 297
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id PO4
_struct_site.pdbx_auth_seq_id 337
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 3
_struct_site.details 'BINDING SITE FOR RESIDUE PO4 A 337'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 3 ARG A 149 ? ARG A 149 . ? 1_555 ?
2 AC1 3 SER A 180 ? SER A 180 . ? 1_555 ?
3 AC1 3 GLY A 189 ? GLY A 189 . ? 1_555 ?
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 C
_pdbx_validate_close_contact.auth_asym_id_1 A
_pdbx_validate_close_contact.auth_comp_id_1 ILE
_pdbx_validate_close_contact.auth_seq_id_1 150
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 CD
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 PRO
_pdbx_validate_close_contact.auth_seq_id_2 151
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 1.79
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C A SER 30 ? ? N A GLN 31 ? ? 1.477 1.336 0.141 0.023 Y
2 1 CD A GLU 144 ? ? OE1 A GLU 144 ? ? 1.323 1.252 0.071 0.011 N
3 1 CD A GLU 186 ? ? OE1 A GLU 186 ? ? 1.319 1.252 0.067 0.011 N
4 1 CD A GLU 232 ? ? OE1 A GLU 232 ? ? 1.319 1.252 0.067 0.011 N
5 1 CD A GLU 295 ? ? OE2 A GLU 295 ? ? 1.324 1.252 0.072 0.011 N
6 1 CD A GLU 329 ? ? OE1 A GLU 329 ? ? 1.320 1.252 0.068 0.011 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 CB A ASP 17 ? ? CG A ASP 17 ? ? OD1 A ASP 17 ? ? 111.84 118.30 -6.46 0.90 N
2 1 CB A ASP 91 ? ? CG A ASP 91 ? ? OD1 A ASP 91 ? ? 124.61 118.30 6.31 0.90 N
3 1 CB A ASP 91 ? ? CG A ASP 91 ? ? OD2 A ASP 91 ? ? 112.11 118.30 -6.19 0.90 N
4 1 C A GLY 107 ? ? N A PRO 108 ? ? CD A PRO 108 ? ? 112.30 128.40 -16.10 2.10 Y
5 1 CA A LEU 114 ? ? CB A LEU 114 ? ? CG A LEU 114 ? ? 101.34 115.30 -13.96 2.30 N
6 1 CB A ASP 116 ? ? CG A ASP 116 ? ? OD1 A ASP 116 ? ? 112.61 118.30 -5.69 0.90 N
7 1 CB A ASP 124 ? ? CG A ASP 124 ? ? OD2 A ASP 124 ? ? 111.23 118.30 -7.07 0.90 N
8 1 CD A ARG 137 ? ? NE A ARG 137 ? ? CZ A ARG 137 ? ? 138.23 123.60 14.63 1.40 N
9 1 NE A ARG 137 ? ? CZ A ARG 137 ? ? NH1 A ARG 137 ? ? 127.93 120.30 7.63 0.50 N
10 1 NE A ARG 137 ? ? CZ A ARG 137 ? ? NH2 A ARG 137 ? ? 115.15 120.30 -5.15 0.50 N
11 1 CB A ASP 145 ? ? CG A ASP 145 ? ? OD1 A ASP 145 ? ? 111.90 118.30 -6.40 0.90 N
12 1 C A ILE 150 ? ? N A PRO 151 ? ? CD A PRO 151 ? ? 78.80 128.40 -49.60 2.10 Y
13 1 CA A CYS 178 ? ? CB A CYS 178 ? ? SG A CYS 178 ? ? 101.78 114.00 -12.22 1.80 N
14 1 CB A ASP 192 ? ? CG A ASP 192 ? ? OD2 A ASP 192 ? ? 112.00 118.30 -6.30 0.90 N
15 1 C A HIS 197 ? ? N A PRO 198 ? ? CD A PRO 198 ? ? 100.71 128.40 -27.69 2.10 Y
16 1 C A GLN 207 ? ? N A PRO 208 ? ? CD A PRO 208 ? ? 96.32 128.40 -32.08 2.10 Y
17 1 CB A ASP 226 ? ? CG A ASP 226 ? ? OD1 A ASP 226 ? ? 124.70 118.30 6.40 0.90 N
18 1 CB A ASP 226 ? ? CG A ASP 226 ? ? OD2 A ASP 226 ? ? 111.68 118.30 -6.62 0.90 N
19 1 NE A ARG 253 ? ? CZ A ARG 253 ? ? NH1 A ARG 253 ? ? 123.48 120.30 3.18 0.50 N
20 1 CB A ASP 263 ? ? CG A ASP 263 ? ? OD1 A ASP 263 ? ? 110.74 118.30 -7.56 0.90 N
21 1 C A THR 273 ? ? N A GLY 274 ? ? CA A GLY 274 ? ? 109.69 122.30 -12.61 2.10 Y
22 1 CB A ASP 276 ? ? CG A ASP 276 ? ? OD2 A ASP 276 ? ? 112.07 118.30 -6.23 0.90 N
23 1 C A GLU 309 ? ? N A PRO 310 ? ? CA A PRO 310 ? ? 129.41 119.30 10.11 1.50 Y
24 1 C A GLU 309 ? ? N A PRO 310 ? ? CD A PRO 310 ? ? 104.68 128.40 -23.72 2.10 Y
25 1 CB A ASP 314 ? ? CG A ASP 314 ? ? OD1 A ASP 314 ? ? 112.22 118.30 -6.08 0.90 N
26 1 CB A ASP 332 ? ? CG A ASP 332 ? ? OD1 A ASP 332 ? ? 110.16 118.30 -8.14 0.90 N
27 1 CB A ASP 332 ? ? CG A ASP 332 ? ? OD2 A ASP 332 ? ? 124.66 118.30 6.36 0.90 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 THR A 10 ? ? 13.45 104.41
2 1 SER A 30 ? ? -114.16 -146.75
3 1 ALA A 32 ? ? -32.55 87.90
4 1 ALA A 78 ? ? -93.45 -89.63
5 1 GLU A 86 ? ? -37.44 -19.56
6 1 ASP A 92 ? ? 43.75 -120.02
7 1 PRO A 108 ? ? -22.23 -76.97
8 1 ASP A 116 ? ? -59.95 -7.66
9 1 LYS A 127 ? ? -96.85 -63.49
10 1 ASN A 128 ? ? -56.22 26.31
11 1 LYS A 141 ? ? -40.18 -17.95
12 1 PHE A 143 ? ? -27.22 -53.90
13 1 PRO A 171 ? ? -60.00 -7.74
14 1 THR A 176 ? ? -168.04 104.03
15 1 CYS A 178 ? ? -105.12 -154.55
16 1 SER A 180 ? ? -7.84 -43.57
17 1 HIS A 197 ? ? -178.80 119.80
18 1 PRO A 198 ? ? -22.83 -29.22
19 1 PRO A 208 ? ? -19.52 -64.51
20 1 LEU A 210 ? ? -59.52 -76.79
21 1 ARG A 222 ? ? 72.96 42.36
22 1 GLN A 240 ? ? -176.44 147.98
23 1 GLU A 244 ? ? -166.89 -56.73
24 1 PRO A 251 ? ? -58.90 -170.42
25 1 TYR A 271 ? ? -62.87 -74.67
26 1 PHE A 272 ? ? -48.47 -13.34
27 1 THR A 273 ? ? -60.63 -72.25
28 1 SER A 275 ? ? 52.17 124.52
29 1 GLU A 295 ? ? -26.71 -21.61
30 1 THR A 304 ? ? 87.85 -0.03
31 1 ALA A 307 ? ? 169.39 152.64
32 1 GLU A 309 ? ? 144.83 65.58
33 1 PRO A 310 ? ? -35.27 136.44
34 1 GLN A 324 ? ? 34.96 68.27
35 1 TYR A 327 ? ? -46.81 108.04
36 1 ASP A 332 ? ? -59.90 39.89
#
_pdbx_entry_details.entry_id 1BPD
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details
;RESIDUE PHO IS PROBABLY PHOSPHATE OR SULFATE ANION IN
THE DEOXYNUCLEOSIDE TRIPHOSPHATE BINDING SITE.
;
_pdbx_entry_details.sequence_details
;THE N-TERMINAL METHIONINE IS INCLUDED IN THE GENE SEQUENCE
EVEN THOUGH IT IS REMOVED AFTER TRANSLATION IN THE CELL;
SEE MATSUKAGE ET AL., J. BIOL. CHEM. 262, 8960, (1987).
FOR THE AMINO ACID SEQUENCE SEE A. KUMAR ET AL., J. BIOL.
CHEM. 265, 2124, (1990).
SEQUENCE ADVISORY NOTICE
DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE.
SWISS-PROT ENTRY NAME: DPOB_RAT
SWISS-PROT RESIDUE PDB SEQRES
NAME NUMBER NAME CHAIN SEQ/INSERT CODE
ARG 227 LEU 228
THE PAPER BY KUMAR, ET AL., J.BIOL.CHEM., 265, 2124,
(1990) REPORTS A CORRECTION TO THE SEQUENCE GIVEN IN
SWISS-PROT (SEE REFERENCE 3 ABOVE).
;
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A MET 1 ? A MET 1
2 1 Y 1 A SER 2 ? A SER 2
3 1 Y 1 A LYS 3 ? A LYS 3
4 1 Y 1 A ARG 4 ? A ARG 4
5 1 Y 1 A LYS 5 ? A LYS 5
6 1 Y 1 A ALA 6 ? A ALA 6
7 1 Y 1 A PRO 7 ? A PRO 7
8 1 Y 1 A GLN 8 ? A GLN 8
9 1 Y 1 A ASP 246 ? A ASP 246
10 1 Y 1 A GLU 247 ? A GLU 247
11 1 Y 1 A ASN 248 ? A ASN 248
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLN N N N N 88
GLN CA C N S 89
GLN C C N N 90
GLN O O N N 91
GLN CB C N N 92
GLN CG C N N 93
GLN CD C N N 94
GLN OE1 O N N 95
GLN NE2 N N N 96
GLN OXT O N N 97
GLN H H N N 98
GLN H2 H N N 99
GLN HA H N N 100
GLN HB2 H N N 101
GLN HB3 H N N 102
GLN HG2 H N N 103
GLN HG3 H N N 104
GLN HE21 H N N 105
GLN HE22 H N N 106
GLN HXT H N N 107
GLU N N N N 108
GLU CA C N S 109
GLU C C N N 110
GLU O O N N 111
GLU CB C N N 112
GLU CG C N N 113
GLU CD C N N 114
GLU OE1 O N N 115
GLU OE2 O N N 116
GLU OXT O N N 117
GLU H H N N 118
GLU H2 H N N 119
GLU HA H N N 120
GLU HB2 H N N 121
GLU HB3 H N N 122
GLU HG2 H N N 123
GLU HG3 H N N 124
GLU HE2 H N N 125
GLU HXT H N N 126
GLY N N N N 127
GLY CA C N N 128
GLY C C N N 129
GLY O O N N 130
GLY OXT O N N 131
GLY H H N N 132
GLY H2 H N N 133
GLY HA2 H N N 134
GLY HA3 H N N 135
GLY HXT H N N 136
HIS N N N N 137
HIS CA C N S 138
HIS C C N N 139
HIS O O N N 140
HIS CB C N N 141
HIS CG C Y N 142
HIS ND1 N Y N 143
HIS CD2 C Y N 144
HIS CE1 C Y N 145
HIS NE2 N Y N 146
HIS OXT O N N 147
HIS H H N N 148
HIS H2 H N N 149
HIS HA H N N 150
HIS HB2 H N N 151
HIS HB3 H N N 152
HIS HD1 H N N 153
HIS HD2 H N N 154
HIS HE1 H N N 155
HIS HE2 H N N 156
HIS HXT H N N 157
ILE N N N N 158
ILE CA C N S 159
ILE C C N N 160
ILE O O N N 161
ILE CB C N S 162
ILE CG1 C N N 163
ILE CG2 C N N 164
ILE CD1 C N N 165
ILE OXT O N N 166
ILE H H N N 167
ILE H2 H N N 168
ILE HA H N N 169
ILE HB H N N 170
ILE HG12 H N N 171
ILE HG13 H N N 172
ILE HG21 H N N 173
ILE HG22 H N N 174
ILE HG23 H N N 175
ILE HD11 H N N 176
ILE HD12 H N N 177
ILE HD13 H N N 178
ILE HXT H N N 179
LEU N N N N 180
LEU CA C N S 181
LEU C C N N 182
LEU O O N N 183
LEU CB C N N 184
LEU CG C N N 185
LEU CD1 C N N 186
LEU CD2 C N N 187
LEU OXT O N N 188
LEU H H N N 189
LEU H2 H N N 190
LEU HA H N N 191
LEU HB2 H N N 192
LEU HB3 H N N 193
LEU HG H N N 194
LEU HD11 H N N 195
LEU HD12 H N N 196
LEU HD13 H N N 197
LEU HD21 H N N 198
LEU HD22 H N N 199
LEU HD23 H N N 200
LEU HXT H N N 201
LYS N N N N 202
LYS CA C N S 203
LYS C C N N 204
LYS O O N N 205
LYS CB C N N 206
LYS CG C N N 207
LYS CD C N N 208
LYS CE C N N 209
LYS NZ N N N 210
LYS OXT O N N 211
LYS H H N N 212
LYS H2 H N N 213
LYS HA H N N 214
LYS HB2 H N N 215
LYS HB3 H N N 216
LYS HG2 H N N 217
LYS HG3 H N N 218
LYS HD2 H N N 219
LYS HD3 H N N 220
LYS HE2 H N N 221
LYS HE3 H N N 222
LYS HZ1 H N N 223
LYS HZ2 H N N 224
LYS HZ3 H N N 225
LYS HXT H N N 226
MET N N N N 227
MET CA C N S 228
MET C C N N 229
MET O O N N 230
MET CB C N N 231
MET CG C N N 232
MET SD S N N 233
MET CE C N N 234
MET OXT O N N 235
MET H H N N 236
MET H2 H N N 237
MET HA H N N 238
MET HB2 H N N 239
MET HB3 H N N 240
MET HG2 H N N 241
MET HG3 H N N 242
MET HE1 H N N 243
MET HE2 H N N 244
MET HE3 H N N 245
MET HXT H N N 246
PHE N N N N 247
PHE CA C N S 248
PHE C C N N 249
PHE O O N N 250
PHE CB C N N 251
PHE CG C Y N 252
PHE CD1 C Y N 253
PHE CD2 C Y N 254
PHE CE1 C Y N 255
PHE CE2 C Y N 256
PHE CZ C Y N 257
PHE OXT O N N 258
PHE H H N N 259
PHE H2 H N N 260
PHE HA H N N 261
PHE HB2 H N N 262
PHE HB3 H N N 263
PHE HD1 H N N 264
PHE HD2 H N N 265
PHE HE1 H N N 266
PHE HE2 H N N 267
PHE HZ H N N 268
PHE HXT H N N 269
PO4 P P N N 270
PO4 O1 O N N 271
PO4 O2 O N N 272
PO4 O3 O N N 273
PO4 O4 O N N 274
PRO N N N N 275
PRO CA C N S 276
PRO C C N N 277
PRO O O N N 278
PRO CB C N N 279
PRO CG C N N 280
PRO CD C N N 281
PRO OXT O N N 282
PRO H H N N 283
PRO HA H N N 284
PRO HB2 H N N 285
PRO HB3 H N N 286
PRO HG2 H N N 287
PRO HG3 H N N 288
PRO HD2 H N N 289
PRO HD3 H N N 290
PRO HXT H N N 291
SER N N N N 292
SER CA C N S 293
SER C C N N 294
SER O O N N 295
SER CB C N N 296
SER OG O N N 297
SER OXT O N N 298
SER H H N N 299
SER H2 H N N 300
SER HA H N N 301
SER HB2 H N N 302
SER HB3 H N N 303
SER HG H N N 304
SER HXT H N N 305
THR N N N N 306
THR CA C N S 307
THR C C N N 308
THR O O N N 309
THR CB C N R 310
THR OG1 O N N 311
THR CG2 C N N 312
THR OXT O N N 313
THR H H N N 314
THR H2 H N N 315
THR HA H N N 316
THR HB H N N 317
THR HG1 H N N 318
THR HG21 H N N 319
THR HG22 H N N 320
THR HG23 H N N 321
THR HXT H N N 322
TRP N N N N 323
TRP CA C N S 324
TRP C C N N 325
TRP O O N N 326
TRP CB C N N 327
TRP CG C Y N 328
TRP CD1 C Y N 329
TRP CD2 C Y N 330
TRP NE1 N Y N 331
TRP CE2 C Y N 332
TRP CE3 C Y N 333
TRP CZ2 C Y N 334
TRP CZ3 C Y N 335
TRP CH2 C Y N 336
TRP OXT O N N 337
TRP H H N N 338
TRP H2 H N N 339
TRP HA H N N 340
TRP HB2 H N N 341
TRP HB3 H N N 342
TRP HD1 H N N 343
TRP HE1 H N N 344
TRP HE3 H N N 345
TRP HZ2 H N N 346
TRP HZ3 H N N 347
TRP HH2 H N N 348
TRP HXT H N N 349
TYR N N N N 350
TYR CA C N S 351
TYR C C N N 352
TYR O O N N 353
TYR CB C N N 354
TYR CG C Y N 355
TYR CD1 C Y N 356
TYR CD2 C Y N 357
TYR CE1 C Y N 358
TYR CE2 C Y N 359
TYR CZ C Y N 360
TYR OH O N N 361
TYR OXT O N N 362
TYR H H N N 363
TYR H2 H N N 364
TYR HA H N N 365
TYR HB2 H N N 366
TYR HB3 H N N 367
TYR HD1 H N N 368
TYR HD2 H N N 369
TYR HE1 H N N 370
TYR HE2 H N N 371
TYR HH H N N 372
TYR HXT H N N 373
VAL N N N N 374
VAL CA C N S 375
VAL C C N N 376
VAL O O N N 377
VAL CB C N N 378
VAL CG1 C N N 379
VAL CG2 C N N 380
VAL OXT O N N 381
VAL H H N N 382
VAL H2 H N N 383
VAL HA H N N 384
VAL HB H N N 385
VAL HG11 H N N 386
VAL HG12 H N N 387
VAL HG13 H N N 388
VAL HG21 H N N 389
VAL HG22 H N N 390
VAL HG23 H N N 391
VAL HXT H N N 392
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
ILE N CA sing N N 150
ILE N H sing N N 151
ILE N H2 sing N N 152
ILE CA C sing N N 153
ILE CA CB sing N N 154
ILE CA HA sing N N 155
ILE C O doub N N 156
ILE C OXT sing N N 157
ILE CB CG1 sing N N 158
ILE CB CG2 sing N N 159
ILE CB HB sing N N 160
ILE CG1 CD1 sing N N 161
ILE CG1 HG12 sing N N 162
ILE CG1 HG13 sing N N 163
ILE CG2 HG21 sing N N 164
ILE CG2 HG22 sing N N 165
ILE CG2 HG23 sing N N 166
ILE CD1 HD11 sing N N 167
ILE CD1 HD12 sing N N 168
ILE CD1 HD13 sing N N 169
ILE OXT HXT sing N N 170
LEU N CA sing N N 171
LEU N H sing N N 172
LEU N H2 sing N N 173
LEU CA C sing N N 174
LEU CA CB sing N N 175
LEU CA HA sing N N 176
LEU C O doub N N 177
LEU C OXT sing N N 178
LEU CB CG sing N N 179
LEU CB HB2 sing N N 180
LEU CB HB3 sing N N 181
LEU CG CD1 sing N N 182
LEU CG CD2 sing N N 183
LEU CG HG sing N N 184
LEU CD1 HD11 sing N N 185
LEU CD1 HD12 sing N N 186
LEU CD1 HD13 sing N N 187
LEU CD2 HD21 sing N N 188
LEU CD2 HD22 sing N N 189
LEU CD2 HD23 sing N N 190
LEU OXT HXT sing N N 191
LYS N CA sing N N 192
LYS N H sing N N 193
LYS N H2 sing N N 194
LYS CA C sing N N 195
LYS CA CB sing N N 196
LYS CA HA sing N N 197
LYS C O doub N N 198
LYS C OXT sing N N 199
LYS CB CG sing N N 200
LYS CB HB2 sing N N 201
LYS CB HB3 sing N N 202
LYS CG CD sing N N 203
LYS CG HG2 sing N N 204
LYS CG HG3 sing N N 205
LYS CD CE sing N N 206
LYS CD HD2 sing N N 207
LYS CD HD3 sing N N 208
LYS CE NZ sing N N 209
LYS CE HE2 sing N N 210
LYS CE HE3 sing N N 211
LYS NZ HZ1 sing N N 212
LYS NZ HZ2 sing N N 213
LYS NZ HZ3 sing N N 214
LYS OXT HXT sing N N 215
MET N CA sing N N 216
MET N H sing N N 217
MET N H2 sing N N 218
MET CA C sing N N 219
MET CA CB sing N N 220
MET CA HA sing N N 221
MET C O doub N N 222
MET C OXT sing N N 223
MET CB CG sing N N 224
MET CB HB2 sing N N 225
MET CB HB3 sing N N 226
MET CG SD sing N N 227
MET CG HG2 sing N N 228
MET CG HG3 sing N N 229
MET SD CE sing N N 230
MET CE HE1 sing N N 231
MET CE HE2 sing N N 232
MET CE HE3 sing N N 233
MET OXT HXT sing N N 234
PHE N CA sing N N 235
PHE N H sing N N 236
PHE N H2 sing N N 237
PHE CA C sing N N 238
PHE CA CB sing N N 239
PHE CA HA sing N N 240
PHE C O doub N N 241
PHE C OXT sing N N 242
PHE CB CG sing N N 243
PHE CB HB2 sing N N 244
PHE CB HB3 sing N N 245
PHE CG CD1 doub Y N 246
PHE CG CD2 sing Y N 247
PHE CD1 CE1 sing Y N 248
PHE CD1 HD1 sing N N 249
PHE CD2 CE2 doub Y N 250
PHE CD2 HD2 sing N N 251
PHE CE1 CZ doub Y N 252
PHE CE1 HE1 sing N N 253
PHE CE2 CZ sing Y N 254
PHE CE2 HE2 sing N N 255
PHE CZ HZ sing N N 256
PHE OXT HXT sing N N 257
PO4 P O1 doub N N 258
PO4 P O2 sing N N 259
PO4 P O3 sing N N 260
PO4 P O4 sing N N 261
PRO N CA sing N N 262
PRO N CD sing N N 263
PRO N H sing N N 264
PRO CA C sing N N 265
PRO CA CB sing N N 266
PRO CA HA sing N N 267
PRO C O doub N N 268
PRO C OXT sing N N 269
PRO CB CG sing N N 270
PRO CB HB2 sing N N 271
PRO CB HB3 sing N N 272
PRO CG CD sing N N 273
PRO CG HG2 sing N N 274
PRO CG HG3 sing N N 275
PRO CD HD2 sing N N 276
PRO CD HD3 sing N N 277
PRO OXT HXT sing N N 278
SER N CA sing N N 279
SER N H sing N N 280
SER N H2 sing N N 281
SER CA C sing N N 282
SER CA CB sing N N 283
SER CA HA sing N N 284
SER C O doub N N 285
SER C OXT sing N N 286
SER CB OG sing N N 287
SER CB HB2 sing N N 288
SER CB HB3 sing N N 289
SER OG HG sing N N 290
SER OXT HXT sing N N 291
THR N CA sing N N 292
THR N H sing N N 293
THR N H2 sing N N 294
THR CA C sing N N 295
THR CA CB sing N N 296
THR CA HA sing N N 297
THR C O doub N N 298
THR C OXT sing N N 299
THR CB OG1 sing N N 300
THR CB CG2 sing N N 301
THR CB HB sing N N 302
THR OG1 HG1 sing N N 303
THR CG2 HG21 sing N N 304
THR CG2 HG22 sing N N 305
THR CG2 HG23 sing N N 306
THR OXT HXT sing N N 307
TRP N CA sing N N 308
TRP N H sing N N 309
TRP N H2 sing N N 310
TRP CA C sing N N 311
TRP CA CB sing N N 312
TRP CA HA sing N N 313
TRP C O doub N N 314
TRP C OXT sing N N 315
TRP CB CG sing N N 316
TRP CB HB2 sing N N 317
TRP CB HB3 sing N N 318
TRP CG CD1 doub Y N 319
TRP CG CD2 sing Y N 320
TRP CD1 NE1 sing Y N 321
TRP CD1 HD1 sing N N 322
TRP CD2 CE2 doub Y N 323
TRP CD2 CE3 sing Y N 324
TRP NE1 CE2 sing Y N 325
TRP NE1 HE1 sing N N 326
TRP CE2 CZ2 sing Y N 327
TRP CE3 CZ3 doub Y N 328
TRP CE3 HE3 sing N N 329
TRP CZ2 CH2 doub Y N 330
TRP CZ2 HZ2 sing N N 331
TRP CZ3 CH2 sing Y N 332
TRP CZ3 HZ3 sing N N 333
TRP CH2 HH2 sing N N 334
TRP OXT HXT sing N N 335
TYR N CA sing N N 336
TYR N H sing N N 337
TYR N H2 sing N N 338
TYR CA C sing N N 339
TYR CA CB sing N N 340
TYR CA HA sing N N 341
TYR C O doub N N 342
TYR C OXT sing N N 343
TYR CB CG sing N N 344
TYR CB HB2 sing N N 345
TYR CB HB3 sing N N 346
TYR CG CD1 doub Y N 347
TYR CG CD2 sing Y N 348
TYR CD1 CE1 sing Y N 349
TYR CD1 HD1 sing N N 350
TYR CD2 CE2 doub Y N 351
TYR CD2 HD2 sing N N 352
TYR CE1 CZ doub Y N 353
TYR CE1 HE1 sing N N 354
TYR CE2 CZ sing Y N 355
TYR CE2 HE2 sing N N 356
TYR CZ OH sing N N 357
TYR OH HH sing N N 358
TYR OXT HXT sing N N 359
VAL N CA sing N N 360
VAL N H sing N N 361
VAL N H2 sing N N 362
VAL CA C sing N N 363
VAL CA CB sing N N 364
VAL CA HA sing N N 365
VAL C O doub N N 366
VAL C OXT sing N N 367
VAL CB CG1 sing N N 368
VAL CB CG2 sing N N 369
VAL CB HB sing N N 370
VAL CG1 HG11 sing N N 371
VAL CG1 HG12 sing N N 372
VAL CG1 HG13 sing N N 373
VAL CG2 HG21 sing N N 374
VAL CG2 HG22 sing N N 375
VAL CG2 HG23 sing N N 376
VAL OXT HXT sing N N 377
#
_atom_sites.entry_id 1BPD
_atom_sites.fract_transf_matrix[1][1] 0.025317
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000743
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.014670
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.013289
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
P
S
#
loop_