HEADER    NUCLEOTIDYLTRANSFERASE                  12-APR-94   1BPE              
TITLE     CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA; EVIDENCE FOR A COMMON   
TITLE    2 POLYMERASE MECHANISM                                                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE BETA;                                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 EC: 2.7.7.7;                                                         
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;                              
SOURCE   3 ORGANISM_COMMON: NORWAY RAT;                                         
SOURCE   4 ORGANISM_TAXID: 10116                                                
KEYWDS    NUCLEOTIDYLTRANSFERASE                                                
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.R.SAWAYA,H.PELLETIER,A.KUMAR,S.H.WILSON,J.KRAUT                     
REVDAT   5   07-FEB-24 1BPE    1       REMARK SEQADV                            
REVDAT   4   24-FEB-09 1BPE    1       VERSN                                    
REVDAT   3   01-APR-03 1BPE    1       JRNL                                     
REVDAT   2   15-OCT-94 1BPE    1       SOURCE REMARK                            
REVDAT   1   31-JUL-94 1BPE    0                                                
JRNL        AUTH   M.R.SAWAYA,H.PELLETIER,A.KUMAR,S.H.WILSON,J.KRAUT            
JRNL        TITL   CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A 
JRNL        TITL 2 COMMON POLYMERASE MECHANISM.                                 
JRNL        REF    SCIENCE                       V. 264  1930 1994              
JRNL        REFN                   ISSN 0036-8075                               
JRNL        PMID   7516581                                                      
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   H.PELLETIER,M.R.SAWAYA,S.H.WILSON,J.KRAUT                    
REMARK   1  TITL   STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA,  
REMARK   1  TITL 2 A DNA TEMPLATE-PRIMER, AND DDCTP                             
REMARK   1  REF    SCIENCE                       V. 264  1891 1994              
REMARK   1  REFN                   ISSN 0036-8075                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.90 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : TNT                                                  
REMARK   3   AUTHORS     : TRONRUD,TEN EYCK,MATTHEWS                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 4069                           
REMARK   3                                                                      
REMARK   3  USING DATA ABOVE SIGMA CUTOFF.                                      
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.199                           
REMARK   3   R VALUE            (WORKING SET) : NULL                            
REMARK   3   FREE R VALUE                     : NULL                            
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3                                                                      
REMARK   3  USING ALL DATA, NO SIGMA CUTOFF.                                    
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : NULL                   
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE                  (NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : NULL                   
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2128                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 30                                      
REMARK   3   SOLVENT ATOMS            : 0                                       
REMARK   3                                                                      
REMARK   3  WILSON B VALUE (FROM FCALC, A**2) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.    RMS    WEIGHT  COUNT           
REMARK   3   BOND LENGTHS                 (A) : 0.019 ; NULL  ; NULL            
REMARK   3   BOND ANGLES            (DEGREES) : 3.000 ; NULL  ; NULL            
REMARK   3   TORSION ANGLES         (DEGREES) : NULL  ; NULL  ; NULL            
REMARK   3   PSEUDOROTATION ANGLES  (DEGREES) : NULL  ; NULL  ; NULL            
REMARK   3   TRIGONAL CARBON PLANES       (A) : NULL  ; NULL  ; NULL            
REMARK   3   GENERAL PLANES               (A) : NULL  ; NULL  ; NULL            
REMARK   3   ISOTROPIC THERMAL FACTORS (A**2) : NULL  ; NULL  ; NULL            
REMARK   3   NON-BONDED CONTACTS          (A) : NULL  ; NULL  ; NULL            
REMARK   3                                                                      
REMARK   3  INCORRECT CHIRAL-CENTERS (COUNT) : NULL                             
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  RESTRAINT LIBRARIES.                                                
REMARK   3   STEREOCHEMISTRY : NULL                                             
REMARK   3   ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL                         
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1BPE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000171980.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : NULL                               
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : NULL                               
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : NULL                               
REMARK 200  RADIATION SOURCE               : NULL                               
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : NULL                               
REMARK 200  WAVELENGTH OR RANGE        (A) : NULL                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : NULL                               
REMARK 200  DETECTOR MANUFACTURER          : NULL                               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : NULL                               
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : NULL                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : NULL                               
REMARK 200  RESOLUTION RANGE LOW       (A) : NULL                               
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : NULL                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 53.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL                                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       34.10400            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     LYS A     3                                                      
REMARK 465     ARG A     4                                                      
REMARK 465     LYS A     5                                                      
REMARK 465     ALA A     6                                                      
REMARK 465     PRO A     7                                                      
REMARK 465     GLN A     8                                                      
REMARK 465     GLU A     9                                                      
REMARK 465     THR A    10                                                      
REMARK 465     LEU A    11                                                      
REMARK 465     GLU A    26                                                      
REMARK 465     LYS A    27                                                      
REMARK 465     ASN A    28                                                      
REMARK 465     VAL A    29                                                      
REMARK 465     SER A    30                                                      
REMARK 465     GLN A    31                                                      
REMARK 465     ALA A    32                                                      
REMARK 465     ILE A    33                                                      
REMARK 465     HIS A    34                                                      
REMARK 465     LYS A    35                                                      
REMARK 465     TYR A    36                                                      
REMARK 465     ASN A    37                                                      
REMARK 465     ALA A    38                                                      
REMARK 465     TYR A    39                                                      
REMARK 465     ARG A    40                                                      
REMARK 465     LYS A    41                                                      
REMARK 465     ALA A    42                                                      
REMARK 465     ALA A    43                                                      
REMARK 465     SER A    44                                                      
REMARK 465     VAL A    45                                                      
REMARK 465     ILE A    46                                                      
REMARK 465     ALA A    47                                                      
REMARK 465     LYS A    48                                                      
REMARK 465     TYR A    49                                                      
REMARK 465     PRO A    50                                                      
REMARK 465     HIS A    51                                                      
REMARK 465     LYS A    52                                                      
REMARK 465     ILE A    53                                                      
REMARK 465     LYS A    54                                                      
REMARK 465     SER A    55                                                      
REMARK 465     GLY A    64                                                      
REMARK 465     VAL A    65                                                      
REMARK 465     GLY A    66                                                      
REMARK 465     THR A    67                                                      
REMARK 465     LYS A    68                                                      
REMARK 465     ILE A    69                                                      
REMARK 465     ALA A    70                                                      
REMARK 465     ASP A   246                                                      
REMARK 465     GLU A   247                                                      
REMARK 465     ASN A   248                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ASN A  12    CG   OD1  ND2                                       
REMARK 470     ILE A  15    CG1  CG2  CD1                                       
REMARK 470     THR A  16    OG1  CG2                                            
REMARK 470     ASP A  17    CG   OD1  OD2                                       
REMARK 470     MET A  18    CG   SD   CE                                        
REMARK 470     LEU A  19    CG   CD1  CD2                                       
REMARK 470     VAL A  20    CG1  CG2                                            
REMARK 470     GLU A  21    CG   CD   OE1  OE2                                  
REMARK 470     LEU A  22    CG   CD1  CD2                                       
REMARK 470     ASN A  24    CG   OD1  ND2                                       
REMARK 470     PHE A  25    CG   CD1  CD2  CE1  CE2  CZ                         
REMARK 470     GLU A  58    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  60    CG   CD   CE   NZ                                   
REMARK 470     LYS A  61    CG   CD   CE   NZ                                   
REMARK 470     LEU A  62    CG   CD1  CD2                                       
REMARK 470     PRO A  63    CG   CD                                             
REMARK 470     GLU A  71    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  72    CG   CD   CE   NZ                                   
REMARK 470     ILE A  73    CG1  CG2  CD1                                       
REMARK 470     ASP A  74    CG   OD1  OD2                                       
REMARK 470     GLU A  75    CG   CD   OE1  OE2                                  
REMARK 470     LEU A  77    CG   CD1  CD2                                       
REMARK 470     LYS A  81    CG   CD   CE   NZ                                   
REMARK 470     LEU A  82    CG   CD1  CD2                                       
REMARK 470     ARG A  83    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A  84    CG   CD   CE   NZ                                   
REMARK 470     LEU A  85    CG   CD1  CD2                                       
REMARK 470     GLU A  86    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  87    CG   CD   CE   NZ                                   
REMARK 470     ILE A  88    CG1  CG2  CD1                                       
REMARK 470     ARG A  89    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG A  90    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ASP A  91    CG   OD1  OD2                                       
REMARK 470     ASP A  92    CG   OD1  OD2                                       
REMARK 470     SER A 109    OG                                                  
REMARK 470     ILE A 119    CG1  CG2  CD1                                       
REMARK 470     GLU A 123    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 131    CG   CD   CE   NZ                                   
REMARK 470     ARG A 149    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLN A 159    CG   CD   OE1  NE2                                  
REMARK 470     SER A 243    OG                                                  
REMARK 470     GLU A 244    CG   CD   OE1  OE2                                  
REMARK 470     ASN A 245    CG   OD1  ND2                                       
REMARK 470     LYS A 280    CG   CD   CE   NZ                                   
REMARK 470     ILE A 293    CG1  CG2  CD1                                       
REMARK 470     VAL A 303    CG1  CG2                                            
REMARK 470     THR A 304    OG1  CG2                                            
REMARK 470     VAL A 306    CG1  CG2                                            
REMARK 470     ARG A 326    CG   CD   NE   CZ   NH1  NH2                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   N    THR A   227     OE2  GLU A   335     2656     2.06            
REMARK 500   CA   ASP A   226     OE2  GLU A   335     2656     2.11            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    ASP A  74   N     ASP A  74   CA      0.160                       
REMARK 500    GLU A 117   CD    GLU A 117   OE1     0.068                       
REMARK 500    GLU A 144   CD    GLU A 144   OE1     0.070                       
REMARK 500    GLU A 147   CD    GLU A 147   OE1     0.075                       
REMARK 500    GLU A 153   CD    GLU A 153   OE2     0.072                       
REMARK 500    GLU A 165   CD    GLU A 165   OE1     0.071                       
REMARK 500    GLU A 172   CD    GLU A 172   OE2     0.068                       
REMARK 500    GLU A 186   CD    GLU A 186   OE1     0.067                       
REMARK 500    GLU A 203   CD    GLU A 203   OE1     0.071                       
REMARK 500    GLU A 232   CD    GLU A 232   OE1     0.069                       
REMARK 500    GLU A 249   CD    GLU A 249   OE1     0.072                       
REMARK 500    GLU A 288   CD    GLU A 288   OE1     0.081                       
REMARK 500    GLU A 295   CD    GLU A 295   OE1     0.070                       
REMARK 500    GLU A 329   CD    GLU A 329   OE1     0.071                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    PRO A  63   N   -  CA  -  CB  ANGL. DEV. =   7.6 DEGREES          
REMARK 500    ASP A  74   C   -  N   -  CA  ANGL. DEV. = -17.6 DEGREES          
REMARK 500    ASP A  74   N   -  CA  -  CB  ANGL. DEV. = -12.9 DEGREES          
REMARK 500    ASP A  74   N   -  CA  -  C   ANGL. DEV. =  18.1 DEGREES          
REMARK 500    ASP A 124   CB  -  CG  -  OD1 ANGL. DEV. =  -5.7 DEGREES          
REMARK 500    ARG A 126   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.5 DEGREES          
REMARK 500    ASP A 130   CB  -  CG  -  OD1 ANGL. DEV. =  -6.5 DEGREES          
REMARK 500    ASP A 130   CB  -  CG  -  OD2 ANGL. DEV. =   6.0 DEGREES          
REMARK 500    ARG A 137   NE  -  CZ  -  NH1 ANGL. DEV. =   3.0 DEGREES          
REMARK 500    ASP A 145   CB  -  CG  -  OD1 ANGL. DEV. =  -7.1 DEGREES          
REMARK 500    ASP A 145   CB  -  CG  -  OD2 ANGL. DEV. =   5.6 DEGREES          
REMARK 500    PRO A 151   C   -  N   -  CA  ANGL. DEV. =   9.8 DEGREES          
REMARK 500    PRO A 151   C   -  N   -  CD  ANGL. DEV. = -36.1 DEGREES          
REMARK 500    ASP A 160   CB  -  CG  -  OD1 ANGL. DEV. =  -6.5 DEGREES          
REMARK 500    PRO A 171   C   -  N   -  CD  ANGL. DEV. = -32.7 DEGREES          
REMARK 500    ASP A 192   CB  -  CG  -  OD1 ANGL. DEV. =   5.9 DEGREES          
REMARK 500    ASP A 192   CB  -  CG  -  OD2 ANGL. DEV. =  -6.1 DEGREES          
REMARK 500    ARG A 222   CB  -  CA  -  C   ANGL. DEV. =  12.6 DEGREES          
REMARK 500    ARG A 222   NE  -  CZ  -  NH1 ANGL. DEV. =   3.0 DEGREES          
REMARK 500    PRO A 242   C   -  N   -  CD  ANGL. DEV. = -33.3 DEGREES          
REMARK 500    PRO A 251   C   -  N   -  CD  ANGL. DEV. = -16.0 DEGREES          
REMARK 500    ARG A 253   NE  -  CZ  -  NH1 ANGL. DEV. =   3.0 DEGREES          
REMARK 500    ASP A 256   CB  -  CG  -  OD1 ANGL. DEV. =  -8.7 DEGREES          
REMARK 500    SER A 275   CB  -  CA  -  C   ANGL. DEV. = -13.8 DEGREES          
REMARK 500    ASP A 276   CB  -  CG  -  OD2 ANGL. DEV. =  -7.5 DEGREES          
REMARK 500    ARG A 299   NE  -  CZ  -  NH1 ANGL. DEV. =   3.7 DEGREES          
REMARK 500    ASP A 318   CB  -  CG  -  OD1 ANGL. DEV. =  -6.8 DEGREES          
REMARK 500    ASP A 318   CB  -  CG  -  OD2 ANGL. DEV. =   5.7 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ILE A  73      176.74    179.84                                   
REMARK 500    ASP A  74       14.76    -50.45                                   
REMARK 500    THR A  79      134.10    111.77                                   
REMARK 500    LYS A  81     -139.46     95.80                                   
REMARK 500    GLU A  86        8.82     42.87                                   
REMARK 500    ALA A 110      -82.04    -33.87                                   
REMARK 500    GLU A 117       49.07    -74.59                                   
REMARK 500    LYS A 120      -31.20   -173.53                                   
REMARK 500    ASN A 128       31.71    -53.61                                   
REMARK 500    ASP A 130      -38.77    -29.12                                   
REMARK 500    LYS A 131        0.25    -67.76                                   
REMARK 500    HIS A 135      -96.80    -56.75                                   
REMARK 500    GLN A 136      -25.77    -36.99                                   
REMARK 500    PHE A 143      -47.80      8.48                                   
REMARK 500    ARG A 152        1.70    -56.70                                   
REMARK 500    ASP A 160      -80.91    -59.91                                   
REMARK 500    ILE A 161      -33.56    -35.55                                   
REMARK 500    CYS A 178     -138.77   -128.84                                   
REMARK 500    PHE A 181      -34.33    -39.19                                   
REMARK 500    ARG A 183      -13.62    -48.25                                   
REMARK 500    ALA A 185      145.44    -24.14                                   
REMARK 500    SER A 188     -142.79    -92.17                                   
REMARK 500    ASP A 192       91.52   -168.06                                   
REMARK 500    LYS A 206       80.87   -170.31                                   
REMARK 500    GLN A 207       36.62   -157.55                                   
REMARK 500    LEU A 210      -70.57    -51.96                                   
REMARK 500    GLN A 217      -71.93    -48.40                                   
REMARK 500    LEU A 218      -18.76    -40.66                                   
REMARK 500    VAL A 221        0.04    -64.61                                   
REMARK 500    LEU A 228      -81.68    -71.53                                   
REMARK 500    SER A 229     -160.24   -114.82                                   
REMARK 500    LYS A 230      135.51    177.95                                   
REMARK 500    GLU A 232      -63.44     55.41                                   
REMARK 500    CYS A 239     -159.22    -97.18                                   
REMARK 500    GLN A 240      118.81    164.50                                   
REMARK 500    SER A 243     -169.27   -111.02                                   
REMARK 500    GLU A 244       13.45    167.63                                   
REMARK 500    TYR A 265      -73.37    -39.27                                   
REMARK 500    SER A 275     -167.36    -73.39                                   
REMARK 500    ASP A 276      -76.54    -54.98                                   
REMARK 500    ALA A 284      -79.95    -56.82                                   
REMARK 500    LEU A 301     -142.96    -67.47                                   
REMARK 500    THR A 304        4.74    111.49                                   
REMARK 500    ALA A 307      166.56    177.16                                   
REMARK 500    GLU A 309      120.88    146.47                                   
REMARK 500    ASP A 314      -72.45    -64.10                                   
REMARK 500    GLN A 317      -15.07    -46.17                                   
REMARK 500    GLN A 324      106.76     36.32                                   
REMARK 500    TYR A 327       81.71    -57.43                                   
REMARK 500    ARG A 328       82.76    -67.92                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 ILE A   73     ASP A   74                  121.72                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP A 338                 
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 SEQUENCE ADVISORY NOTICE                                             
REMARK 999      DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE.                 
REMARK 999                                                                      
REMARK 999      SWISS-PROT ENTRY NAME: DPOB_HUMAN                               
REMARK 999                                                                      
REMARK 999      SWISS-PROT RESIDUE      PDB SEQRES                              
REMARK 999                                                                      
REMARK 999        GLN       89          ARG             90                      
REMARK 999        ARG      227          LEU            228                      
REMARK 999                                                                      
REMARK 999 THE N-TERMINAL METHIONINE IS INCLUDED IN THE GENE SEQUENCE           
REMARK 999 EVEN THOUGH IT IS REMOVED AFTER TRANSLATION IN THE CELL;             
REMARK 999 SEE MATSUKAGE ET AL., J.  BIOL.  CHEM.  262, 8960, (1987).           
REMARK 999 FOR THE AMINO ACID SEQUENCE SEE A. KUMAR ET AL.,  J.  BIOL.          
REMARK 999 CHEM.  265, 2124, (1990).                                            
DBREF  1BPE A    2   335  UNP    P06766   DPOB_RAT         1    334             
SEQADV 1BPE ARG A   90  UNP  P06766    GLN    89 CONFLICT                       
SEQRES   1 A  335  MET SER LYS ARG LYS ALA PRO GLN GLU THR LEU ASN GLY          
SEQRES   2 A  335  GLY ILE THR ASP MET LEU VAL GLU LEU ALA ASN PHE GLU          
SEQRES   3 A  335  LYS ASN VAL SER GLN ALA ILE HIS LYS TYR ASN ALA TYR          
SEQRES   4 A  335  ARG LYS ALA ALA SER VAL ILE ALA LYS TYR PRO HIS LYS          
SEQRES   5 A  335  ILE LYS SER GLY ALA GLU ALA LYS LYS LEU PRO GLY VAL          
SEQRES   6 A  335  GLY THR LYS ILE ALA GLU LYS ILE ASP GLU PHE LEU ALA          
SEQRES   7 A  335  THR GLY LYS LEU ARG LYS LEU GLU LYS ILE ARG ARG ASP          
SEQRES   8 A  335  ASP THR SER SER SER ILE ASN PHE LEU THR ARG VAL THR          
SEQRES   9 A  335  GLY ILE GLY PRO SER ALA ALA ARG LYS LEU VAL ASP GLU          
SEQRES  10 A  335  GLY ILE LYS THR LEU GLU ASP LEU ARG LYS ASN GLU ASP          
SEQRES  11 A  335  LYS LEU ASN HIS HIS GLN ARG ILE GLY LEU LYS TYR PHE          
SEQRES  12 A  335  GLU ASP PHE GLU LYS ARG ILE PRO ARG GLU GLU MET LEU          
SEQRES  13 A  335  GLN MET GLN ASP ILE VAL LEU ASN GLU VAL LYS LYS LEU          
SEQRES  14 A  335  ASP PRO GLU TYR ILE ALA THR VAL CYS GLY SER PHE ARG          
SEQRES  15 A  335  ARG GLY ALA GLU SER SER GLY ASP MET ASP VAL LEU LEU          
SEQRES  16 A  335  THR HIS PRO ASN PHE THR SER GLU SER SER LYS GLN PRO          
SEQRES  17 A  335  LYS LEU LEU HIS ARG VAL VAL GLU GLN LEU GLN LYS VAL          
SEQRES  18 A  335  ARG PHE ILE THR ASP THR LEU SER LYS GLY GLU THR LYS          
SEQRES  19 A  335  PHE MET GLY VAL CYS GLN LEU PRO SER GLU ASN ASP GLU          
SEQRES  20 A  335  ASN GLU TYR PRO HIS ARG ARG ILE ASP ILE ARG LEU ILE          
SEQRES  21 A  335  PRO LYS ASP GLN TYR TYR CYS GLY VAL LEU TYR PHE THR          
SEQRES  22 A  335  GLY SER ASP ILE PHE ASN LYS ASN MET ARG ALA HIS ALA          
SEQRES  23 A  335  LEU GLU LYS GLY PHE THR ILE ASN GLU TYR THR ILE ARG          
SEQRES  24 A  335  PRO LEU GLY VAL THR GLY VAL ALA GLY GLU PRO LEU PRO          
SEQRES  25 A  335  VAL ASP SER GLU GLN ASP ILE PHE ASP TYR ILE GLN TRP          
SEQRES  26 A  335  ARG TYR ARG GLU PRO LYS ASP ARG SER GLU                      
HET    DTP  A 338      30                                                       
HETNAM     DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE                                
FORMUL   2  DTP    C10 H16 N5 O12 P3                                            
HELIX    1   1 ASN A   12  PHE A   25  1                                  14    
HELIX    2   2 ASP A   74  THR A   79  1                                   6    
HELIX    3   3 LYS A   81  GLU A   86  1                                   6    
HELIX    4   4 THR A   93  ARG A  102  1                                  10    
HELIX    5   5 GLY A  107  GLU A  117  1                                  11    
HELIX    6   6 THR A  121  ASN A  128  1                                   8    
HELIX    7   7 GLU A  129  LEU A  132  5                                   4    
HELIX    8   8 ASN A  133  TYR A  142  1                                  10    
HELIX    9   9 GLU A  144  LYS A  148  5                                   5    
HELIX   10  10 PRO A  151  ASP A  170  1                                  20    
HELIX   11  11 CYS A  178  GLY A  184  1                                   7    
HELIX   12  12 PRO A  208  VAL A  221  1                                  14    
HELIX   13  13 GLN A  264  GLY A  274  1                                  11    
HELIX   14  14 ILE A  277  LYS A  289  1                                  13    
HELIX   15  15 GLU A  316  ILE A  323  1                                   8    
HELIX   16  16 GLU A  329  ARG A  333  5                                   5    
SHEET    1   A 5 ILE A 174  VAL A 177  0                                        
SHEET    2   A 5 VAL A 193  THR A 196 -1  N  LEU A 194   O  THR A 176           
SHEET    3   A 5 ARG A 254  LEU A 259  1  O  ASP A 256   N  VAL A 193           
SHEET    4   A 5 LYS A 234  VAL A 238 -1  N  PHE A 235   O  ILE A 257           
SHEET    5   A 5 ASP A 226  THR A 227 -1  N  ASP A 226   O  VAL A 238           
SHEET    1   B 2 PHE A 291  THR A 292  0                                        
SHEET    2   B 2 ARG A 299  PRO A 300 -1  N  ARG A 299   O  THR A 292           
CISPEP   1 GLY A  274    SER A  275          0         0.24                     
SITE     1 AC1  4 SER A 180  SER A 188  GLY A 189  ASP A 190                    
CRYST1   39.319   68.208   75.038  90.00  91.77  90.00 P 1 21 1      2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.025433  0.000000  0.000786        0.00000                         
SCALE2      0.000000  0.014661  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013333        0.00000