HEADER CHAPERONE 20-AUG-98 1BQ0 TITLE J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT TITLE 2 (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAJ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL FRAGMENT (RESIDUES 1-104); COMPND 5 SYNONYM: HSP40; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: MGT7; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: T7; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11D KEYWDS CHAPERONE, HEAT SHOCK, PROTEIN FOLDING, DNAK EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.HUANG,J.M.FLANAGAN,J.H.PRESTEGARD REVDAT 3 16-FEB-22 1BQ0 1 REMARK REVDAT 2 24-FEB-09 1BQ0 1 VERSN REVDAT 1 15-JUN-99 1BQ0 0 JRNL AUTH K.HUANG,J.M.FLANAGAN,J.H.PRESTEGARD JRNL TITL THE INFLUENCE OF C-TERMINAL EXTENSION ON THE STRUCTURE OF JRNL TITL 2 THE "J-DOMAIN" IN E. COLI DNAJ. JRNL REF PROTEIN SCI. V. 8 203 1999 JRNL REFN ISSN 0961-8368 JRNL PMID 10210198 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.B.HILL,J.M.FLANAGAN,J.H.PRESTEGARD REMARK 1 TITL 1H AND 15N MAGNETIC RESONANCE ASSIGNMENTS, SECONDARY REMARK 1 TITL 2 STRUCTURE, AND TERTIARY FOLD OF ESCHERICHIA COLI DNAJ(1-78) REMARK 1 REF BIOCHEMISTRY V. 34 5587 1995 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS ARE IN THE PRIMARY REMARK 3 JOURNAL REFERENCE REMARK 4 REMARK 4 1BQ0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171994. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 50 MM PHOSPHATE REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 2MM, 10% D2O IN H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : SEE PAPER *JRNL* REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITY; OMEGA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; GE REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : DG/SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ZERO VIOLATIONS/ENERGY (SEE REMARK 210 PAPER *JRNL*) REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N LABELED PROTEIN REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 78 REMARK 465 GLY A 79 REMARK 465 GLY A 80 REMARK 465 GLY A 81 REMARK 465 GLY A 82 REMARK 465 PHE A 83 REMARK 465 GLY A 84 REMARK 465 GLY A 85 REMARK 465 GLY A 86 REMARK 465 ALA A 87 REMARK 465 ASP A 88 REMARK 465 PHE A 89 REMARK 465 SER A 90 REMARK 465 ASP A 91 REMARK 465 ILE A 92 REMARK 465 PHE A 93 REMARK 465 GLY A 94 REMARK 465 ASP A 95 REMARK 465 VAL A 96 REMARK 465 PHE A 97 REMARK 465 GLY A 98 REMARK 465 ASP A 99 REMARK 465 ILE A 100 REMARK 465 PHE A 101 REMARK 465 GLY A 102 REMARK 465 GLY A 103 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 28 H HIS A 32 1.45 REMARK 500 O ALA A 28 H TYR A 31 1.46 REMARK 500 O GLU A 19 H ALA A 23 1.47 REMARK 500 O GLU A 7 H GLY A 10 1.52 REMARK 500 O LYS A 45 H GLU A 48 1.53 REMARK 500 O LYS A 61 H TYR A 65 1.55 REMARK 500 O ALA A 44 H LYS A 47 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 4 -171.95 -52.17 REMARK 500 1 TYR A 5 -29.67 -141.62 REMARK 500 1 VAL A 11 -142.90 -139.42 REMARK 500 1 LYS A 13 -38.10 77.35 REMARK 500 1 ALA A 15 -160.52 -55.66 REMARK 500 1 GLU A 16 -118.60 -145.26 REMARK 500 1 HIS A 32 94.86 -26.34 REMARK 500 1 ASN A 36 42.40 -94.88 REMARK 500 1 ASP A 39 -38.91 -133.77 REMARK 500 1 GLN A 67 -39.03 -142.46 REMARK 500 1 TYR A 68 42.98 -90.14 REMARK 500 2 ASP A 4 174.77 -48.30 REMARK 500 2 LYS A 13 23.17 40.70 REMARK 500 2 ALA A 15 -146.61 -88.23 REMARK 500 2 GLU A 16 -122.29 -149.78 REMARK 500 2 HIS A 32 160.19 -36.57 REMARK 500 2 PRO A 33 -152.33 -59.27 REMARK 500 2 ASP A 34 -63.56 69.82 REMARK 500 2 GLN A 37 67.29 76.81 REMARK 500 2 ASP A 39 -110.11 -154.25 REMARK 500 2 LYS A 40 -71.45 61.66 REMARK 500 2 ILE A 49 -69.47 -94.03 REMARK 500 2 TYR A 68 -98.61 -91.47 REMARK 500 2 HIS A 70 -114.13 -150.41 REMARK 500 2 PHE A 73 -56.15 -122.85 REMARK 500 2 GLU A 74 -79.29 62.45 REMARK 500 3 ASP A 4 -94.08 -83.35 REMARK 500 3 TYR A 5 -40.80 176.09 REMARK 500 3 VAL A 11 -154.45 -138.60 REMARK 500 3 LYS A 13 -41.83 74.98 REMARK 500 3 ALA A 15 -150.26 -56.84 REMARK 500 3 GLU A 16 -146.80 -150.35 REMARK 500 3 HIS A 32 164.34 -38.66 REMARK 500 3 PRO A 33 -157.26 -58.07 REMARK 500 3 ASP A 34 -69.13 68.74 REMARK 500 3 ASN A 36 -149.45 -106.39 REMARK 500 3 GLN A 37 69.46 -157.44 REMARK 500 3 ASP A 39 -94.32 -153.45 REMARK 500 3 LYS A 40 -71.39 58.97 REMARK 500 3 ILE A 49 -77.06 -100.94 REMARK 500 3 TYR A 68 -67.52 -102.74 REMARK 500 3 HIS A 70 -117.31 -157.21 REMARK 500 3 GLU A 74 51.77 -144.60 REMARK 500 4 LYS A 2 104.02 53.30 REMARK 500 4 ASP A 4 173.61 -45.61 REMARK 500 4 LYS A 13 -14.21 -44.01 REMARK 500 4 ALA A 15 -153.78 -87.67 REMARK 500 4 GLU A 16 -124.92 -151.21 REMARK 500 4 HIS A 32 90.25 -25.00 REMARK 500 4 ASP A 34 -39.61 -39.84 REMARK 500 REMARK 500 THIS ENTRY HAS 314 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 18 0.32 SIDE CHAIN REMARK 500 1 ARG A 21 0.29 SIDE CHAIN REMARK 500 1 ARG A 26 0.20 SIDE CHAIN REMARK 500 1 ARG A 35 0.26 SIDE CHAIN REMARK 500 1 ARG A 62 0.23 SIDE CHAIN REMARK 500 2 ARG A 18 0.25 SIDE CHAIN REMARK 500 2 ARG A 26 0.23 SIDE CHAIN REMARK 500 2 ARG A 35 0.08 SIDE CHAIN REMARK 500 2 ARG A 62 0.17 SIDE CHAIN REMARK 500 3 ARG A 18 0.24 SIDE CHAIN REMARK 500 3 ARG A 21 0.22 SIDE CHAIN REMARK 500 3 ARG A 26 0.27 SIDE CHAIN REMARK 500 3 ARG A 35 0.32 SIDE CHAIN REMARK 500 3 ARG A 62 0.31 SIDE CHAIN REMARK 500 4 ARG A 18 0.14 SIDE CHAIN REMARK 500 4 ARG A 21 0.27 SIDE CHAIN REMARK 500 4 ARG A 26 0.30 SIDE CHAIN REMARK 500 4 ARG A 35 0.19 SIDE CHAIN REMARK 500 4 ARG A 62 0.29 SIDE CHAIN REMARK 500 5 ARG A 18 0.28 SIDE CHAIN REMARK 500 5 ARG A 21 0.22 SIDE CHAIN REMARK 500 5 ARG A 26 0.27 SIDE CHAIN REMARK 500 5 ARG A 35 0.13 SIDE CHAIN REMARK 500 5 ARG A 62 0.29 SIDE CHAIN REMARK 500 6 ARG A 26 0.20 SIDE CHAIN REMARK 500 6 ARG A 62 0.15 SIDE CHAIN REMARK 500 7 ARG A 18 0.23 SIDE CHAIN REMARK 500 7 ARG A 21 0.09 SIDE CHAIN REMARK 500 7 ARG A 26 0.29 SIDE CHAIN REMARK 500 7 ARG A 35 0.14 SIDE CHAIN REMARK 500 7 ARG A 62 0.19 SIDE CHAIN REMARK 500 8 ARG A 18 0.29 SIDE CHAIN REMARK 500 8 ARG A 21 0.30 SIDE CHAIN REMARK 500 8 ARG A 26 0.28 SIDE CHAIN REMARK 500 8 ARG A 35 0.32 SIDE CHAIN REMARK 500 8 ARG A 62 0.14 SIDE CHAIN REMARK 500 9 ARG A 18 0.32 SIDE CHAIN REMARK 500 9 ARG A 21 0.29 SIDE CHAIN REMARK 500 9 ARG A 26 0.32 SIDE CHAIN REMARK 500 9 ARG A 35 0.29 SIDE CHAIN REMARK 500 9 ARG A 62 0.20 SIDE CHAIN REMARK 500 10 ARG A 18 0.32 SIDE CHAIN REMARK 500 10 ARG A 21 0.30 SIDE CHAIN REMARK 500 10 ARG A 26 0.25 SIDE CHAIN REMARK 500 10 ARG A 35 0.25 SIDE CHAIN REMARK 500 10 ARG A 62 0.18 SIDE CHAIN REMARK 500 11 ARG A 18 0.28 SIDE CHAIN REMARK 500 11 ARG A 21 0.24 SIDE CHAIN REMARK 500 11 ARG A 26 0.32 SIDE CHAIN REMARK 500 11 ARG A 35 0.25 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 95 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1BQ0 A 1 103 UNP P08622 DNAJ_ECOLI 1 103 SEQRES 1 A 103 ALA LYS GLN ASP TYR TYR GLU ILE LEU GLY VAL SER LYS SEQRES 2 A 103 THR ALA GLU GLU ARG GLU ILE ARG LYS ALA TYR LYS ARG SEQRES 3 A 103 LEU ALA MET LYS TYR HIS PRO ASP ARG ASN GLN GLY ASP SEQRES 4 A 103 LYS GLU ALA GLU ALA LYS PHE LYS GLU ILE LYS GLU ALA SEQRES 5 A 103 TYR GLU VAL LEU THR ASP SER GLN LYS ARG ALA ALA TYR SEQRES 6 A 103 ASP GLN TYR GLY HIS ALA ALA PHE GLU GLN GLY GLY MET SEQRES 7 A 103 GLY GLY GLY GLY PHE GLY GLY GLY ALA ASP PHE SER ASP SEQRES 8 A 103 ILE PHE GLY ASP VAL PHE GLY ASP ILE PHE GLY GLY HELIX 1 1H TYR A 5 GLY A 10 1 6 HELIX 2 2H GLU A 16 TYR A 31 1 16 HELIX 3 3H GLU A 41 LEU A 56 1 16 HELIX 4 4H LYS A 61 TYR A 68 1 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1