HEADER    DNA                                     22-SEP-98   1BWG              
TITLE     DNA TRIPLEX WITH 5' AND 3' JUNCTIONS, NMR, 10 STRUCTURES              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-D(*GP*AP*CP*TP*GP*AP*GP*AP*GP*AP*CP*GP*TP*A)-3');  
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: DNA (5'-D(*TP*AP*CP*GP*TP*CP*TP*CP*TP*CP*AP*GP*TP*C)-3');  
COMPND   7 CHAIN: B;                                                            
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: DNA (5'-D(*CP*TP*CP*TP*CP*T)-3');                          
COMPND  11 CHAIN: C;                                                            
COMPND  12 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 MOL_ID: 2;                                                           
SOURCE   4 SYNTHETIC: YES;                                                      
SOURCE   5 MOL_ID: 3;                                                           
SOURCE   6 SYNTHETIC: YES                                                       
KEYWDS    DEOXYRIBONUCLEIC ACID, DNA TRIPLEX, TRIPLEX-DUPLEX JUNCTIONS, DNA     
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    J.L.ASENSIO,T.BROWN,A.N.LANE                                          
REVDAT   4   22-MAY-24 1BWG    1       REMARK                                   
REVDAT   3   16-FEB-22 1BWG    1       REMARK                                   
REVDAT   2   24-FEB-09 1BWG    1       VERSN                                    
REVDAT   1   23-MAR-99 1BWG    0                                                
JRNL        AUTH   J.L.ASENSIO,T.BROWN,A.N.LANE                                 
JRNL        TITL   SOLUTION CONFORMATION OF A PARALLEL DNA TRIPLE HELIX WITH 5' 
JRNL        TITL 2 AND 3' TRIPLEX-DUPLEX JUNCTIONS.                             
JRNL        REF    STRUCTURE FOLD.DES.           V.   7     1 1999              
JRNL        REFN                   ISSN 0969-2126                               
JRNL        PMID   10368268                                                     
JRNL        DOI    10.1016/S0969-2126(99)80004-5                                
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   J.P.BARTLEY,T.BROWN,A.N.LANE                                 
REMARK   1  TITL   SOLUTION CONFORMATION OF AN INTRAMOLECULAR DNA TRIPLEX       
REMARK   1  TITL 2 CONTAINING A NONNUCLEOTIDE LINKER: COMPARISON WITH THE DNA   
REMARK   1  TITL 3 DUPLEX                                                       
REMARK   1  REF    BIOCHEMISTRY                  V.  36 14502 1997              
REMARK   1  REFN                   ISSN 0006-2960                               
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : DISCOVER                                             
REMARK   3   AUTHORS     : BIOSYM                                               
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: RESTRAINED MD                             
REMARK   4                                                                      
REMARK   4 1BWG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000172122.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 313                                
REMARK 210  PH                             : 5                                  
REMARK 210  IONIC STRENGTH                 : 0.1                                
REMARK 210  PRESSURE                       : 1 ATM                              
REMARK 210  SAMPLE CONTENTS                : NULL                               
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : NOESY DQF-COSY; ROESY; 13C-HSQC    
REMARK 210  SPECTROMETER FIELD STRENGTH    : 500 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : UNITYPLUS                          
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : DISCOVER                           
REMARK 210   METHOD USED                   : RESTRAINED MOLECULAR DYNAMICS      
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 30                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : LEAST RESTRAINT VIOLATIONS         
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL                
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURES WERE DETERMINED FROM NOE AND J-COUPLING       
REMARK 210  DATA ON TWO INTRAMOLECULAR DNA TRIPLE HELICES CONTAINING            
REMARK 210  IDENTICAL CORE SEGMENTS. THE RESTRAINTS WERE GENERATED FOR THE      
REMARK 210  SUPERMOLECULE CONTAINING THE CORE TRIPLEX REGION AND THE 5' AND     
REMARK 210  3' DUPLEX EXTEN SIONS.                                              
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500  1  DC C   3   N3     DC C   3   C4      0.045                       
REMARK 500  1  DC C   5   N3     DC C   5   C4      0.043                       
REMARK 500  2  DC C   1   N3     DC C   1   C4      0.042                       
REMARK 500  2  DC C   3   N3     DC C   3   C4      0.044                       
REMARK 500  2  DC C   5   N3     DC C   5   C4      0.043                       
REMARK 500  3  DC C   1   N3     DC C   1   C4      0.042                       
REMARK 500  3  DC C   3   N3     DC C   3   C4      0.043                       
REMARK 500  3  DC C   5   N3     DC C   5   C4      0.043                       
REMARK 500  4  DC C   1   N3     DC C   1   C4      0.043                       
REMARK 500  4  DC C   3   N3     DC C   3   C4      0.043                       
REMARK 500  4  DC C   5   N3     DC C   5   C4      0.043                       
REMARK 500  5  DC C   3   N3     DC C   3   C4      0.045                       
REMARK 500  5  DC C   5   N3     DC C   5   C4      0.044                       
REMARK 500  6  DC C   1   N3     DC C   1   C4      0.042                       
REMARK 500  6  DC C   3   N3     DC C   3   C4      0.044                       
REMARK 500  6  DC C   5   N3     DC C   5   C4      0.044                       
REMARK 500  7  DC C   3   N3     DC C   3   C4      0.045                       
REMARK 500  7  DC C   5   N3     DC C   5   C4      0.042                       
REMARK 500  8  DC C   1   N3     DC C   1   C4      0.042                       
REMARK 500  8  DC C   3   N3     DC C   3   C4      0.044                       
REMARK 500  8  DC C   5   N3     DC C   5   C4      0.043                       
REMARK 500  9  DC C   3   N3     DC C   3   C4      0.045                       
REMARK 500  9  DC C   5   N3     DC C   5   C4      0.042                       
REMARK 500 10  DC C   3   N3     DC C   3   C4      0.045                       
REMARK 500 10  DC C   5   N3     DC C   5   C4      0.042                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500  1  DG A   1   O4' -  C1' -  N9  ANGL. DEV. =   1.8 DEGREES          
REMARK 500  1  DA A   2   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  1  DT A   4   C4  -  C5  -  C6  ANGL. DEV. =   3.8 DEGREES          
REMARK 500  1  DG A   7   O4' -  C1' -  N9  ANGL. DEV. =   3.9 DEGREES          
REMARK 500  1  DG A   9   O4' -  C1' -  N9  ANGL. DEV. =   2.1 DEGREES          
REMARK 500  1  DA A  10   O4' -  C1' -  N9  ANGL. DEV. =   5.3 DEGREES          
REMARK 500  1  DC A  11   O4' -  C1' -  N1  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  1  DT A  13   O4' -  C1' -  N1  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  1  DA A  14   O4' -  C1' -  N9  ANGL. DEV. =   3.3 DEGREES          
REMARK 500  1  DT B   1   O4' -  C1' -  N1  ANGL. DEV. =   8.1 DEGREES          
REMARK 500  1  DC B   3   O4' -  C1' -  N1  ANGL. DEV. =   3.9 DEGREES          
REMARK 500  1  DG B   4   O4' -  C1' -  N9  ANGL. DEV. =   3.1 DEGREES          
REMARK 500  1  DC B   6   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500  1  DT B   7   O4' -  C1' -  N1  ANGL. DEV. =   2.0 DEGREES          
REMARK 500  1  DC B   8   O4' -  C1' -  N1  ANGL. DEV. =   2.1 DEGREES          
REMARK 500  1  DG B  12   O4' -  C1' -  N9  ANGL. DEV. =   6.4 DEGREES          
REMARK 500  1  DC B  14   O4' -  C1' -  N1  ANGL. DEV. =   2.9 DEGREES          
REMARK 500  1  DC C   1   O4' -  C1' -  N1  ANGL. DEV. =   8.9 DEGREES          
REMARK 500  1  DT C   2   C6  -  C5  -  C7  ANGL. DEV. =  -6.2 DEGREES          
REMARK 500  1  DC C   3   O4' -  C1' -  N1  ANGL. DEV. =   2.8 DEGREES          
REMARK 500  1  DT C   4   C6  -  C5  -  C7  ANGL. DEV. =  -3.7 DEGREES          
REMARK 500  1  DC C   5   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500  1  DT C   6   O4' -  C1' -  N1  ANGL. DEV. =   3.5 DEGREES          
REMARK 500  2  DA A   2   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  2  DG A   7   O4' -  C1' -  N9  ANGL. DEV. =   3.8 DEGREES          
REMARK 500  2  DG A   9   O4' -  C1' -  N9  ANGL. DEV. =   2.0 DEGREES          
REMARK 500  2  DA A  10   O4' -  C1' -  N9  ANGL. DEV. =   5.4 DEGREES          
REMARK 500  2  DC A  11   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500  2  DT A  13   O4' -  C1' -  N1  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  2  DA A  14   O4' -  C1' -  N9  ANGL. DEV. =   3.2 DEGREES          
REMARK 500  2  DT B   1   O4' -  C1' -  N1  ANGL. DEV. =   8.1 DEGREES          
REMARK 500  2  DC B   3   O4' -  C1' -  N1  ANGL. DEV. =   4.1 DEGREES          
REMARK 500  2  DG B   4   O4' -  C1' -  N9  ANGL. DEV. =   2.8 DEGREES          
REMARK 500  2  DC B   6   O4' -  C1' -  N1  ANGL. DEV. =   2.9 DEGREES          
REMARK 500  2  DT B   7   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500  2  DT B   9   O4' -  C1' -  N1  ANGL. DEV. =   3.5 DEGREES          
REMARK 500  2  DG B  12   O4' -  C1' -  N9  ANGL. DEV. =   5.9 DEGREES          
REMARK 500  2  DC B  14   O4' -  C1' -  N1  ANGL. DEV. =   3.0 DEGREES          
REMARK 500  2  DC C   1   O4' -  C1' -  N1  ANGL. DEV. =   8.6 DEGREES          
REMARK 500  2  DT C   2   C6  -  C5  -  C7  ANGL. DEV. =  -5.6 DEGREES          
REMARK 500  2  DC C   3   O4' -  C1' -  N1  ANGL. DEV. =   2.7 DEGREES          
REMARK 500  2  DT C   4   C6  -  C5  -  C7  ANGL. DEV. =  -4.1 DEGREES          
REMARK 500  2  DC C   5   O4' -  C1' -  N1  ANGL. DEV. =   2.2 DEGREES          
REMARK 500  2  DT C   6   O4' -  C1' -  N1  ANGL. DEV. =   3.5 DEGREES          
REMARK 500  3  DA A   2   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  3  DT A   4   C4  -  C5  -  C6  ANGL. DEV. =   3.7 DEGREES          
REMARK 500  3  DG A   7   O4' -  C1' -  N9  ANGL. DEV. =   3.7 DEGREES          
REMARK 500  3  DA A   8   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500  3  DG A   9   O4' -  C1' -  N9  ANGL. DEV. =   2.4 DEGREES          
REMARK 500  3  DA A  10   O4' -  C1' -  N9  ANGL. DEV. =   5.4 DEGREES          
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     222 ANGLE DEVIATIONS.                             
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1BCB   RELATED DB: PDB                                   
REMARK 900 ENSEMBLE OF 10 STRUCTURES                                            
REMARK 900 RELATED ID: 1BCE   RELATED DB: PDB                                   
REMARK 900 ENSEMBLE OF 10 STRUCTURES                                            
DBREF  1BWG A    1    14  PDB    1BWG     1BWG             1     14             
DBREF  1BWG B    1    14  PDB    1BWG     1BWG             1     14             
DBREF  1BWG C    1     6  PDB    1BWG     1BWG             1      6             
SEQRES   1 A   14   DG  DA  DC  DT  DG  DA  DG  DA  DG  DA  DC  DG  DT          
SEQRES   2 A   14   DA                                                          
SEQRES   1 B   14   DT  DA  DC  DG  DT  DC  DT  DC  DT  DC  DA  DG  DT          
SEQRES   2 B   14   DC                                                          
SEQRES   1 C    6   DC  DT  DC  DT  DC  DT                                      
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1