data_1BY6 # _entry.id 1BY6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.390 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BY6 pdb_00001by6 10.2210/pdb1by6/pdb RCSB RCSB010133 ? ? WWPDB D_1000010133 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-11-15 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-03-14 5 'Structure model' 1 4 2024-04-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Experimental preparation' 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_entity_src_syn 2 4 'Structure model' pdbx_nmr_exptl_sample 3 4 'Structure model' pdbx_nmr_sample_details 4 4 'Structure model' pdbx_nmr_spectrometer 5 4 'Structure model' pdbx_struct_assembly 6 4 'Structure model' pdbx_struct_assembly_prop 7 4 'Structure model' pdbx_struct_oper_list 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_entity_src_syn.details' 2 4 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 3 4 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 4 4 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 5 4 'Structure model' '_pdbx_nmr_sample_details.solvent_system' 6 4 'Structure model' '_pdbx_nmr_spectrometer.field_strength' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BY6 _pdbx_database_status.recvd_initial_deposition_date 1999-12-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Storjohann, R.' 1 ? 'Rozek, A.' 2 ? 'Sparrow, J.T.' 3 ? 'Cushley, R.J.' 4 ? # _citation.id primary _citation.title ;Structure of a biologically active fragment of human serum apolipoprotein C-II in the presence of sodium dodecyl sulfate and dodecylphosphocholine. ; _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1486 _citation.page_first 253 _citation.page_last 264 _citation.year 2000 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10903476 _citation.pdbx_database_id_DOI '10.1016/S1388-1981(00)00062-7' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Storjohann, R.' 1 ? primary 'Rozek, A.' 2 ? primary 'Sparrow, J.T.' 3 ? primary 'Cushley, R.J.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'APOLIPOPROTEIN C-II' _entity.formula_weight 3971.444 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RESIDUES 44-79' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AVDEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE _entity_poly.pdbx_seq_one_letter_code_can AVDEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 VAL n 1 3 ASP n 1 4 GLU n 1 5 LYS n 1 6 LEU n 1 7 ARG n 1 8 ASP n 1 9 LEU n 1 10 TYR n 1 11 SER n 1 12 LYS n 1 13 SER n 1 14 THR n 1 15 ALA n 1 16 ALA n 1 17 MET n 1 18 SER n 1 19 THR n 1 20 TYR n 1 21 THR n 1 22 GLY n 1 23 ILE n 1 24 PHE n 1 25 THR n 1 26 ASP n 1 27 GLN n 1 28 VAL n 1 29 LEU n 1 30 SER n 1 31 VAL n 1 32 LEU n 1 33 LYS n 1 34 GLY n 1 35 GLU n 1 36 GLU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ;THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED ON AN ABI 430A SYNTHESIZER (PE APPLIED BIOSYSTEMS, FOSTER CITY, CA, USA) BY THE SOLID PHASE METHOD USING T-BOC/BENZYL PROTECTING GROUPS AND A PHENYL-ACETAMIDOMETHYL-POLYSTYRENE SUPPORT WITH FAST HBTU/HOBT COUPLING. AFTER SYNTHESIS THE PEPTIDE WAS DEPROTECTED AND CLEAVED FROM THE RESIN WITH TMSBR. ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 44 44 ALA ALA A . n A 1 2 VAL 2 45 45 VAL VAL A . n A 1 3 ASP 3 46 46 ASP ASP A . n A 1 4 GLU 4 47 47 GLU GLU A . n A 1 5 LYS 5 48 48 LYS LYS A . n A 1 6 LEU 6 49 49 LEU LEU A . n A 1 7 ARG 7 50 50 ARG ARG A . n A 1 8 ASP 8 51 51 ASP ASP A . n A 1 9 LEU 9 52 52 LEU LEU A . n A 1 10 TYR 10 53 53 TYR TYR A . n A 1 11 SER 11 54 54 SER SER A . n A 1 12 LYS 12 55 55 LYS LYS A . n A 1 13 SER 13 56 56 SER SER A . n A 1 14 THR 14 57 57 THR THR A . n A 1 15 ALA 15 58 58 ALA ALA A . n A 1 16 ALA 16 59 59 ALA ALA A . n A 1 17 MET 17 60 60 MET MET A . n A 1 18 SER 18 61 61 SER SER A . n A 1 19 THR 19 62 62 THR THR A . n A 1 20 TYR 20 63 63 TYR TYR A . n A 1 21 THR 21 64 64 THR THR A . n A 1 22 GLY 22 65 65 GLY GLY A . n A 1 23 ILE 23 66 66 ILE ILE A . n A 1 24 PHE 24 67 67 PHE PHE A . n A 1 25 THR 25 68 68 THR THR A . n A 1 26 ASP 26 69 69 ASP ASP A . n A 1 27 GLN 27 70 70 GLN GLN A . n A 1 28 VAL 28 71 71 VAL VAL A . n A 1 29 LEU 29 72 72 LEU LEU A . n A 1 30 SER 30 73 73 SER SER A . n A 1 31 VAL 31 74 74 VAL VAL A . n A 1 32 LEU 32 75 75 LEU LEU A . n A 1 33 LYS 33 76 76 LYS LYS A . n A 1 34 GLY 34 77 77 GLY GLY A . n A 1 35 GLU 35 78 78 GLU GLU A . n A 1 36 GLU 36 79 79 GLU GLU A . n # _cell.entry_id 1BY6 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BY6 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1BY6 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1BY6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1BY6 _struct.title 'Peptide of human apolipoprotein C-II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BY6 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'APOLIPOPROTEIN, AMPHIPATHIC HELIX, LIPID ASSOCIATION, LPL ACTIVATION, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code APOC2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02655 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BY6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 36 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02655 _struct_ref_seq.db_align_beg 66 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 101 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 79 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 4050 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 26 ? SER A 30 ? ASP A 69 SER A 73 5 ? 5 HELX_P HELX_P2 2 VAL A 31 ? GLU A 35 ? VAL A 74 GLU A 78 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A GLN 70 ? ? H A SER 73 ? ? 1.59 2 2 O A THR 68 ? ? H A GLN 70 ? ? 1.59 3 3 O A ASP 69 ? ? H A LEU 72 ? ? 1.60 4 4 O A SER 56 ? ? H A ALA 58 ? ? 1.55 5 6 O A ASP 69 ? ? H A VAL 71 ? ? 1.56 6 10 O A GLN 70 ? ? H A SER 73 ? ? 1.51 7 10 O A SER 61 ? ? H A TYR 63 ? ? 1.56 8 10 O A THR 68 ? ? H A GLN 70 ? ? 1.56 9 12 O A SER 61 ? ? H A TYR 63 ? ? 1.55 10 13 O A ASP 69 ? ? H A VAL 71 ? ? 1.57 11 14 O A ASP 69 ? ? H A VAL 71 ? ? 1.55 12 16 O A ASP 69 ? ? H A VAL 71 ? ? 1.58 13 16 O A LYS 48 ? ? H A ARG 50 ? ? 1.60 14 17 O A ASP 69 ? ? H A VAL 71 ? ? 1.55 15 18 O A GLN 70 ? ? H A SER 73 ? ? 1.54 16 18 O A SER 56 ? ? H A ALA 58 ? ? 1.58 17 19 O A GLN 70 ? ? H A SER 73 ? ? 1.49 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 45 ? ? -117.75 77.58 2 1 LYS A 48 ? ? -135.63 -50.80 3 1 ARG A 50 ? ? 56.87 117.06 4 1 LYS A 55 ? ? -177.49 -37.92 5 1 ALA A 59 ? ? 72.52 45.97 6 1 SER A 61 ? ? 44.90 25.69 7 1 TYR A 63 ? ? -102.25 70.02 8 1 ILE A 66 ? ? -178.90 61.27 9 1 ASP A 69 ? ? 52.75 176.89 10 1 GLN A 70 ? ? 45.33 -92.58 11 1 SER A 73 ? ? -149.40 40.10 12 1 GLU A 78 ? ? -178.77 36.87 13 2 ASP A 46 ? ? -160.77 56.19 14 2 GLU A 47 ? ? 64.62 106.73 15 2 LEU A 49 ? ? 50.66 -172.44 16 2 ASP A 51 ? ? -137.53 -39.02 17 2 SER A 54 ? ? -91.11 37.58 18 2 LYS A 55 ? ? -77.82 -150.23 19 2 MET A 60 ? ? -175.80 74.99 20 2 SER A 61 ? ? 40.76 73.65 21 2 ILE A 66 ? ? -151.37 57.23 22 2 ASP A 69 ? ? 67.63 -57.40 23 2 GLN A 70 ? ? -20.38 -76.02 24 2 VAL A 74 ? ? -132.56 -48.73 25 2 LYS A 76 ? ? -144.20 47.61 26 2 GLU A 78 ? ? -140.46 21.99 27 3 LYS A 48 ? ? 63.64 83.39 28 3 SER A 56 ? ? -134.60 -53.65 29 3 MET A 60 ? ? -41.72 95.24 30 3 SER A 61 ? ? 52.35 -92.12 31 3 THR A 64 ? ? -95.02 -60.35 32 3 ILE A 66 ? ? -156.66 85.92 33 3 THR A 68 ? ? 63.75 69.55 34 3 ASP A 69 ? ? -35.39 -28.20 35 3 SER A 73 ? ? -152.01 32.60 36 3 LEU A 75 ? ? -85.90 45.32 37 3 GLU A 78 ? ? 65.98 115.46 38 4 GLU A 47 ? ? -176.84 78.89 39 4 LYS A 48 ? ? -100.52 -82.91 40 4 ARG A 50 ? ? 54.33 119.64 41 4 ASP A 51 ? ? -98.70 50.06 42 4 LYS A 55 ? ? 174.98 -47.44 43 4 SER A 56 ? ? -171.46 -172.86 44 4 THR A 57 ? ? 64.22 -54.03 45 4 ALA A 58 ? ? -39.95 -24.48 46 4 ALA A 59 ? ? 77.01 49.94 47 4 MET A 60 ? ? -143.89 -72.36 48 4 SER A 61 ? ? -42.70 -75.78 49 4 TYR A 63 ? ? 175.77 110.73 50 4 THR A 64 ? ? -162.19 -51.01 51 4 ILE A 66 ? ? -178.84 68.43 52 4 ASP A 69 ? ? 55.15 164.29 53 4 GLN A 70 ? ? 39.49 -91.78 54 4 VAL A 71 ? ? -38.84 -29.87 55 4 SER A 73 ? ? -153.30 44.18 56 4 LYS A 76 ? ? -142.23 25.85 57 5 GLU A 47 ? ? 50.43 -88.69 58 5 LEU A 49 ? ? -80.01 49.92 59 5 SER A 56 ? ? 62.02 -97.48 60 5 ALA A 58 ? ? -94.58 56.97 61 5 ALA A 59 ? ? -149.62 13.03 62 5 MET A 60 ? ? 176.29 -55.83 63 5 SER A 61 ? ? -41.18 -70.71 64 5 TYR A 63 ? ? 178.42 124.64 65 5 THR A 64 ? ? -168.47 -63.24 66 5 ILE A 66 ? ? -176.43 68.96 67 5 ASP A 69 ? ? 70.55 -168.21 68 5 LEU A 72 ? ? -137.85 -51.19 69 5 VAL A 74 ? ? -109.53 55.81 70 5 LYS A 76 ? ? -172.32 36.44 71 6 VAL A 45 ? ? -100.15 56.79 72 6 ASP A 46 ? ? 172.86 59.75 73 6 ARG A 50 ? ? 58.44 128.98 74 6 SER A 56 ? ? -161.37 -60.39 75 6 MET A 60 ? ? -35.18 141.47 76 6 TYR A 63 ? ? -156.07 77.20 77 6 THR A 64 ? ? -124.64 -76.68 78 6 ILE A 66 ? ? -173.70 56.91 79 6 THR A 68 ? ? 60.41 141.75 80 6 ASP A 69 ? ? -63.47 -152.95 81 6 GLN A 70 ? ? 65.76 -58.26 82 6 SER A 73 ? ? -146.80 39.70 83 6 LYS A 76 ? ? 174.88 63.67 84 7 GLU A 47 ? ? 57.03 96.76 85 7 LYS A 48 ? ? 172.18 79.52 86 7 LEU A 49 ? ? -62.53 74.26 87 7 ARG A 50 ? ? 40.45 73.34 88 7 SER A 54 ? ? -110.50 73.76 89 7 LYS A 55 ? ? -171.74 -45.71 90 7 MET A 60 ? ? 1.11 64.28 91 7 SER A 61 ? ? 52.48 106.61 92 7 THR A 62 ? ? 38.63 42.54 93 7 THR A 64 ? ? -122.90 -53.74 94 7 ILE A 66 ? ? -159.18 -38.33 95 7 PHE A 67 ? ? 177.06 79.84 96 7 ASP A 69 ? ? 48.99 -179.18 97 7 GLN A 70 ? ? 59.29 -74.34 98 7 SER A 73 ? ? 170.42 59.98 99 7 GLU A 78 ? ? -152.65 26.75 100 8 VAL A 45 ? ? -91.11 38.76 101 8 ASP A 46 ? ? -176.65 49.93 102 8 GLU A 47 ? ? -173.13 85.21 103 8 LYS A 48 ? ? -154.56 -39.17 104 8 ARG A 50 ? ? 43.03 70.62 105 8 TYR A 53 ? ? -13.46 -53.28 106 8 SER A 54 ? ? -64.92 73.62 107 8 SER A 56 ? ? -147.97 -68.79 108 8 ALA A 58 ? ? -113.43 60.84 109 8 ALA A 59 ? ? -146.19 -41.15 110 8 SER A 61 ? ? 76.23 -49.98 111 8 THR A 62 ? ? -159.31 88.47 112 8 TYR A 63 ? ? -45.78 87.41 113 8 THR A 64 ? ? 38.45 73.54 114 8 ILE A 66 ? ? -172.00 54.60 115 8 PHE A 67 ? ? -175.83 116.23 116 8 ASP A 69 ? ? 53.55 171.43 117 8 GLN A 70 ? ? 56.19 -83.11 118 8 LEU A 72 ? ? -163.26 47.47 119 8 SER A 73 ? ? -177.84 63.61 120 8 GLU A 78 ? ? -178.68 33.31 121 9 VAL A 45 ? ? -118.89 76.38 122 9 GLU A 47 ? ? -43.16 -72.65 123 9 LYS A 48 ? ? -147.50 -65.51 124 9 SER A 54 ? ? -79.84 48.65 125 9 MET A 60 ? ? -40.32 -73.73 126 9 TYR A 63 ? ? -160.08 77.47 127 9 THR A 64 ? ? -77.27 -70.03 128 9 ILE A 66 ? ? -176.92 39.30 129 9 THR A 68 ? ? 35.90 30.25 130 9 GLN A 70 ? ? 57.38 -78.99 131 9 VAL A 71 ? ? -78.87 49.98 132 9 LEU A 72 ? ? -140.77 43.20 133 9 SER A 73 ? ? -143.34 32.16 134 9 GLU A 78 ? ? -177.71 31.28 135 10 GLU A 47 ? ? -130.43 -134.43 136 10 LEU A 49 ? ? 53.62 173.30 137 10 ARG A 50 ? ? -64.38 69.86 138 10 LYS A 55 ? ? -61.94 -153.81 139 10 ALA A 58 ? ? -64.08 72.73 140 10 ALA A 59 ? ? 68.69 -53.43 141 10 MET A 60 ? ? -35.73 -71.53 142 10 SER A 61 ? ? -49.80 -178.97 143 10 THR A 62 ? ? 62.63 -58.76 144 10 ILE A 66 ? ? 171.91 74.90 145 10 ASP A 69 ? ? 65.97 -59.35 146 10 GLN A 70 ? ? -38.73 -78.17 147 10 GLU A 78 ? ? -176.05 38.97 148 11 GLU A 47 ? ? -169.75 51.23 149 11 LYS A 48 ? ? -109.31 73.26 150 11 LEU A 49 ? ? -84.07 48.33 151 11 ARG A 50 ? ? 53.25 73.10 152 11 LYS A 55 ? ? -138.53 -59.70 153 11 SER A 56 ? ? -178.58 -61.23 154 11 ALA A 58 ? ? 35.28 58.58 155 11 MET A 60 ? ? 173.44 -63.72 156 11 SER A 61 ? ? -38.27 -31.27 157 11 THR A 62 ? ? -143.43 36.28 158 11 TYR A 63 ? ? -49.50 107.63 159 11 THR A 64 ? ? -160.82 -51.65 160 11 ILE A 66 ? ? -176.75 62.52 161 11 THR A 68 ? ? -155.33 36.41 162 11 GLN A 70 ? ? 59.99 -66.70 163 11 GLU A 78 ? ? 178.65 41.84 164 12 ASP A 46 ? ? -150.47 50.78 165 12 LYS A 48 ? ? -107.44 66.44 166 12 LEU A 49 ? ? -42.17 157.91 167 12 ARG A 50 ? ? -63.47 72.57 168 12 LYS A 55 ? ? -152.33 41.73 169 12 SER A 56 ? ? -132.11 -59.18 170 12 MET A 60 ? ? -73.20 -92.73 171 12 SER A 61 ? ? -64.31 -175.56 172 12 THR A 62 ? ? 63.31 -58.45 173 12 TYR A 63 ? ? -118.16 66.49 174 12 ILE A 66 ? ? -176.99 46.57 175 12 ASP A 69 ? ? 63.73 135.98 176 12 GLN A 70 ? ? 64.77 -64.70 177 12 VAL A 71 ? ? -82.39 45.05 178 12 LEU A 72 ? ? -162.98 50.46 179 12 SER A 73 ? ? 167.12 59.46 180 12 GLU A 78 ? ? -165.74 36.73 181 13 ASP A 46 ? ? -153.49 44.87 182 13 GLU A 47 ? ? -177.35 72.14 183 13 LEU A 49 ? ? 53.02 175.43 184 13 ARG A 50 ? ? -49.55 90.72 185 13 SER A 54 ? ? -81.48 30.98 186 13 LYS A 55 ? ? -141.33 -63.73 187 13 SER A 56 ? ? -163.16 -49.96 188 13 THR A 57 ? ? 74.27 38.35 189 13 ALA A 58 ? ? 40.44 71.83 190 13 ALA A 59 ? ? 169.18 -42.61 191 13 MET A 60 ? ? 50.23 73.43 192 13 THR A 62 ? ? 58.83 127.78 193 13 TYR A 63 ? ? -178.03 -34.81 194 13 THR A 64 ? ? 58.64 16.93 195 13 ILE A 66 ? ? -125.23 -69.17 196 13 PHE A 67 ? ? 172.98 159.88 197 13 THR A 68 ? ? -169.45 -47.09 198 13 GLN A 70 ? ? 61.69 -58.24 199 13 VAL A 71 ? ? -87.33 37.19 200 13 LEU A 72 ? ? -165.82 53.44 201 13 SER A 73 ? ? 179.17 59.78 202 13 GLU A 78 ? ? 175.63 41.66 203 14 ASP A 46 ? ? -149.17 35.16 204 14 GLU A 47 ? ? -156.88 76.42 205 14 LEU A 52 ? ? 44.51 29.38 206 14 TYR A 53 ? ? 55.96 72.71 207 14 SER A 54 ? ? 38.47 78.95 208 14 MET A 60 ? ? 177.78 70.24 209 14 SER A 61 ? ? 41.04 86.05 210 14 THR A 62 ? ? 42.83 80.64 211 14 TYR A 63 ? ? -172.65 92.81 212 14 ILE A 66 ? ? -149.16 22.88 213 14 PHE A 67 ? ? 178.92 131.06 214 14 THR A 68 ? ? -150.04 36.91 215 14 GLN A 70 ? ? 62.14 -56.57 216 14 SER A 73 ? ? -163.49 53.01 217 14 GLU A 78 ? ? 173.67 -25.67 218 15 GLU A 47 ? ? -57.03 -167.35 219 15 LYS A 48 ? ? -152.74 63.64 220 15 ASP A 51 ? ? -151.95 -40.94 221 15 LYS A 55 ? ? -84.24 -85.24 222 15 SER A 56 ? ? 172.94 130.88 223 15 THR A 57 ? ? -161.72 -54.32 224 15 ALA A 58 ? ? -89.08 46.35 225 15 ALA A 59 ? ? -159.83 -35.83 226 15 MET A 60 ? ? -45.91 -70.66 227 15 SER A 61 ? ? -94.38 -96.08 228 15 THR A 64 ? ? 76.28 -12.82 229 15 ILE A 66 ? ? -166.75 72.51 230 15 ASP A 69 ? ? -38.07 -30.96 231 15 LYS A 76 ? ? 174.58 150.56 232 15 GLU A 78 ? ? -175.62 36.54 233 16 ASP A 46 ? ? -152.48 33.44 234 16 GLU A 47 ? ? -65.11 70.09 235 16 LYS A 48 ? ? 179.35 117.80 236 16 LEU A 49 ? ? -68.06 60.28 237 16 ARG A 50 ? ? -137.70 -47.15 238 16 LYS A 55 ? ? 169.81 64.36 239 16 SER A 56 ? ? -149.67 -78.08 240 16 ALA A 59 ? ? 170.37 -40.26 241 16 SER A 61 ? ? 41.37 72.56 242 16 THR A 62 ? ? 38.09 34.54 243 16 ASP A 69 ? ? 54.13 169.41 244 16 GLN A 70 ? ? 61.95 -59.51 245 16 VAL A 71 ? ? -85.51 30.70 246 16 SER A 73 ? ? 176.18 64.12 247 16 GLU A 78 ? ? 176.17 40.29 248 17 GLU A 47 ? ? -40.27 103.85 249 17 LYS A 48 ? ? -170.46 -139.15 250 17 LEU A 49 ? ? -50.55 -71.11 251 17 LEU A 52 ? ? 45.53 27.93 252 17 SER A 54 ? ? 74.40 -13.65 253 17 LYS A 55 ? ? 63.74 127.99 254 17 SER A 56 ? ? 69.49 -126.78 255 17 ALA A 58 ? ? 39.01 39.79 256 17 ALA A 59 ? ? -153.90 39.06 257 17 SER A 61 ? ? 56.39 118.51 258 17 THR A 62 ? ? 47.24 94.51 259 17 TYR A 63 ? ? -179.26 96.48 260 17 ILE A 66 ? ? -151.18 48.76 261 17 THR A 68 ? ? -153.38 42.79 262 17 GLN A 70 ? ? 62.89 -55.31 263 17 VAL A 71 ? ? -82.15 45.85 264 17 LYS A 76 ? ? 172.40 97.40 265 18 VAL A 45 ? ? -118.93 78.79 266 18 ASP A 46 ? ? -159.03 57.30 267 18 ARG A 50 ? ? 54.88 77.70 268 18 LYS A 55 ? ? -153.01 -49.79 269 18 SER A 56 ? ? -47.08 -100.96 270 18 THR A 57 ? ? -66.00 59.60 271 18 MET A 60 ? ? -142.04 -158.35 272 18 SER A 61 ? ? 50.54 -91.46 273 18 TYR A 63 ? ? 179.18 92.17 274 18 ILE A 66 ? ? -172.31 24.36 275 18 PHE A 67 ? ? -176.41 42.18 276 18 VAL A 74 ? ? -136.72 -42.55 277 18 GLU A 78 ? ? -58.48 82.17 278 19 GLU A 47 ? ? 38.52 29.50 279 19 LYS A 48 ? ? -68.86 63.27 280 19 LEU A 49 ? ? -43.65 99.50 281 19 LYS A 55 ? ? -65.48 -139.68 282 19 THR A 57 ? ? 74.43 37.51 283 19 ALA A 58 ? ? 43.04 85.72 284 19 MET A 60 ? ? -112.06 -74.91 285 19 TYR A 63 ? ? 175.62 121.74 286 19 THR A 64 ? ? -172.27 -60.47 287 19 GLN A 70 ? ? 61.73 -66.99 288 19 GLU A 78 ? ? -152.66 36.66 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 ARG A 50 ? ? 0.275 'SIDE CHAIN' 2 3 ARG A 50 ? ? 0.081 'SIDE CHAIN' 3 4 ARG A 50 ? ? 0.078 'SIDE CHAIN' 4 5 ARG A 50 ? ? 0.192 'SIDE CHAIN' 5 7 ARG A 50 ? ? 0.091 'SIDE CHAIN' 6 8 ARG A 50 ? ? 0.150 'SIDE CHAIN' 7 10 ARG A 50 ? ? 0.110 'SIDE CHAIN' 8 13 ARG A 50 ? ? 0.185 'SIDE CHAIN' 9 14 ARG A 50 ? ? 0.132 'SIDE CHAIN' 10 15 ARG A 50 ? ? 0.274 'SIDE CHAIN' 11 16 ARG A 50 ? ? 0.105 'SIDE CHAIN' 12 17 ARG A 50 ? ? 0.189 'SIDE CHAIN' 13 18 ARG A 50 ? ? 0.079 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 1BY6 _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 19 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with acceptable covalent geometry' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1BY6 _pdbx_nmr_representative.conformer_id 19 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents 'PERDEUTERATED SODIUM DODECYL SULFATE (SDS) IN 160 FOLD MOLAR EXCESS RELATIVE TO PEPTIDE CONCENTRATION' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label ? _pdbx_nmr_sample_details.type ? _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.component apoC-II _pdbx_nmr_exptl_sample.concentration 5 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' _pdbx_nmr_exptl_sample.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 310 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 4.1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K _pdbx_nmr_exptl_sample_conditions.label ? _pdbx_nmr_exptl_sample_conditions.pH_units ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY' 1 2 1 2D-TOCSY 1 3 1 DQF-COSY 1 # _pdbx_nmr_details.entry_id 1BY6 _pdbx_nmr_details.text 'USING WATERGATE FOR WATER SUPPRESSION' # _pdbx_nmr_refine.entry_id 1BY6 _pdbx_nmr_refine.method 'DISTANCE GEOMETRY/SIMULATED ANNEALING/RELAXATION MATRIX REFINEMENT' _pdbx_nmr_refine.details ;THE STRUCTURE OF APOC-II(44-79) IN THE PRESENCE OF SODIUM DODECYL SULFATE WAS REFINED USING A RELAXATION MATRIX REFINEMENT PROTOCOL BASED ON 241 NOESY CROSS- PEAK INTENSITIES MEASURED AT SEVEN DIFFERENT NOESY MIXING TIMES BETWEEN 75 MS AND 300 MS. NO DIHEDRAL RESTRAINTS WERE USED. THIS ENTRY CONTAINS 19 ACCEPTED STRUCTURES. ONE CALCULATED STRUCTURE WAS REJECTED BECAUSE OF HIGH COVALENT ENERGY. STRUCTURE CALCULATIONS WERE PERFORMED WITH THE PROGRAM X-PLOR (AXEL BRUNGER) INCLUDING DISTANCE GEOMETRY CALCULATIONS, SIMULATED ANNEALING (BOTH UNDER THE ISOLATED SPIN PAIR APPROXIMATION AND COMPLETE RELAXATION MATRIX CALCULATIONS) AS WELL AS ENERGY MINIMIZATION WITH A CONJUGATED GRADIENT. THE CHARMM FORCEFIELD WAS USED. FOR DETAILS ON STRUCTURE CALCULATION PLEASE SEE REFERENCE CITED UNDER "JRNL". ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR ? BRUNGER 1 'structure solution' X-PLOR ? BRUNGER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 ILE N N N N 106 ILE CA C N S 107 ILE C C N N 108 ILE O O N N 109 ILE CB C N S 110 ILE CG1 C N N 111 ILE CG2 C N N 112 ILE CD1 C N N 113 ILE OXT O N N 114 ILE H H N N 115 ILE H2 H N N 116 ILE HA H N N 117 ILE HB H N N 118 ILE HG12 H N N 119 ILE HG13 H N N 120 ILE HG21 H N N 121 ILE HG22 H N N 122 ILE HG23 H N N 123 ILE HD11 H N N 124 ILE HD12 H N N 125 ILE HD13 H N N 126 ILE HXT H N N 127 LEU N N N N 128 LEU CA C N S 129 LEU C C N N 130 LEU O O N N 131 LEU CB C N N 132 LEU CG C N N 133 LEU CD1 C N N 134 LEU CD2 C N N 135 LEU OXT O N N 136 LEU H H N N 137 LEU H2 H N N 138 LEU HA H N N 139 LEU HB2 H N N 140 LEU HB3 H N N 141 LEU HG H N N 142 LEU HD11 H N N 143 LEU HD12 H N N 144 LEU HD13 H N N 145 LEU HD21 H N N 146 LEU HD22 H N N 147 LEU HD23 H N N 148 LEU HXT H N N 149 LYS N N N N 150 LYS CA C N S 151 LYS C C N N 152 LYS O O N N 153 LYS CB C N N 154 LYS CG C N N 155 LYS CD C N N 156 LYS CE C N N 157 LYS NZ N N N 158 LYS OXT O N N 159 LYS H H N N 160 LYS H2 H N N 161 LYS HA H N N 162 LYS HB2 H N N 163 LYS HB3 H N N 164 LYS HG2 H N N 165 LYS HG3 H N N 166 LYS HD2 H N N 167 LYS HD3 H N N 168 LYS HE2 H N N 169 LYS HE3 H N N 170 LYS HZ1 H N N 171 LYS HZ2 H N N 172 LYS HZ3 H N N 173 LYS HXT H N N 174 MET N N N N 175 MET CA C N S 176 MET C C N N 177 MET O O N N 178 MET CB C N N 179 MET CG C N N 180 MET SD S N N 181 MET CE C N N 182 MET OXT O N N 183 MET H H N N 184 MET H2 H N N 185 MET HA H N N 186 MET HB2 H N N 187 MET HB3 H N N 188 MET HG2 H N N 189 MET HG3 H N N 190 MET HE1 H N N 191 MET HE2 H N N 192 MET HE3 H N N 193 MET HXT H N N 194 PHE N N N N 195 PHE CA C N S 196 PHE C C N N 197 PHE O O N N 198 PHE CB C N N 199 PHE CG C Y N 200 PHE CD1 C Y N 201 PHE CD2 C Y N 202 PHE CE1 C Y N 203 PHE CE2 C Y N 204 PHE CZ C Y N 205 PHE OXT O N N 206 PHE H H N N 207 PHE H2 H N N 208 PHE HA H N N 209 PHE HB2 H N N 210 PHE HB3 H N N 211 PHE HD1 H N N 212 PHE HD2 H N N 213 PHE HE1 H N N 214 PHE HE2 H N N 215 PHE HZ H N N 216 PHE HXT H N N 217 SER N N N N 218 SER CA C N S 219 SER C C N N 220 SER O O N N 221 SER CB C N N 222 SER OG O N N 223 SER OXT O N N 224 SER H H N N 225 SER H2 H N N 226 SER HA H N N 227 SER HB2 H N N 228 SER HB3 H N N 229 SER HG H N N 230 SER HXT H N N 231 THR N N N N 232 THR CA C N S 233 THR C C N N 234 THR O O N N 235 THR CB C N R 236 THR OG1 O N N 237 THR CG2 C N N 238 THR OXT O N N 239 THR H H N N 240 THR H2 H N N 241 THR HA H N N 242 THR HB H N N 243 THR HG1 H N N 244 THR HG21 H N N 245 THR HG22 H N N 246 THR HG23 H N N 247 THR HXT H N N 248 TYR N N N N 249 TYR CA C N S 250 TYR C C N N 251 TYR O O N N 252 TYR CB C N N 253 TYR CG C Y N 254 TYR CD1 C Y N 255 TYR CD2 C Y N 256 TYR CE1 C Y N 257 TYR CE2 C Y N 258 TYR CZ C Y N 259 TYR OH O N N 260 TYR OXT O N N 261 TYR H H N N 262 TYR H2 H N N 263 TYR HA H N N 264 TYR HB2 H N N 265 TYR HB3 H N N 266 TYR HD1 H N N 267 TYR HD2 H N N 268 TYR HE1 H N N 269 TYR HE2 H N N 270 TYR HH H N N 271 TYR HXT H N N 272 VAL N N N N 273 VAL CA C N S 274 VAL C C N N 275 VAL O O N N 276 VAL CB C N N 277 VAL CG1 C N N 278 VAL CG2 C N N 279 VAL OXT O N N 280 VAL H H N N 281 VAL H2 H N N 282 VAL HA H N N 283 VAL HB H N N 284 VAL HG11 H N N 285 VAL HG12 H N N 286 VAL HG13 H N N 287 VAL HG21 H N N 288 VAL HG22 H N N 289 VAL HG23 H N N 290 VAL HXT H N N 291 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 ILE N CA sing N N 100 ILE N H sing N N 101 ILE N H2 sing N N 102 ILE CA C sing N N 103 ILE CA CB sing N N 104 ILE CA HA sing N N 105 ILE C O doub N N 106 ILE C OXT sing N N 107 ILE CB CG1 sing N N 108 ILE CB CG2 sing N N 109 ILE CB HB sing N N 110 ILE CG1 CD1 sing N N 111 ILE CG1 HG12 sing N N 112 ILE CG1 HG13 sing N N 113 ILE CG2 HG21 sing N N 114 ILE CG2 HG22 sing N N 115 ILE CG2 HG23 sing N N 116 ILE CD1 HD11 sing N N 117 ILE CD1 HD12 sing N N 118 ILE CD1 HD13 sing N N 119 ILE OXT HXT sing N N 120 LEU N CA sing N N 121 LEU N H sing N N 122 LEU N H2 sing N N 123 LEU CA C sing N N 124 LEU CA CB sing N N 125 LEU CA HA sing N N 126 LEU C O doub N N 127 LEU C OXT sing N N 128 LEU CB CG sing N N 129 LEU CB HB2 sing N N 130 LEU CB HB3 sing N N 131 LEU CG CD1 sing N N 132 LEU CG CD2 sing N N 133 LEU CG HG sing N N 134 LEU CD1 HD11 sing N N 135 LEU CD1 HD12 sing N N 136 LEU CD1 HD13 sing N N 137 LEU CD2 HD21 sing N N 138 LEU CD2 HD22 sing N N 139 LEU CD2 HD23 sing N N 140 LEU OXT HXT sing N N 141 LYS N CA sing N N 142 LYS N H sing N N 143 LYS N H2 sing N N 144 LYS CA C sing N N 145 LYS CA CB sing N N 146 LYS CA HA sing N N 147 LYS C O doub N N 148 LYS C OXT sing N N 149 LYS CB CG sing N N 150 LYS CB HB2 sing N N 151 LYS CB HB3 sing N N 152 LYS CG CD sing N N 153 LYS CG HG2 sing N N 154 LYS CG HG3 sing N N 155 LYS CD CE sing N N 156 LYS CD HD2 sing N N 157 LYS CD HD3 sing N N 158 LYS CE NZ sing N N 159 LYS CE HE2 sing N N 160 LYS CE HE3 sing N N 161 LYS NZ HZ1 sing N N 162 LYS NZ HZ2 sing N N 163 LYS NZ HZ3 sing N N 164 LYS OXT HXT sing N N 165 MET N CA sing N N 166 MET N H sing N N 167 MET N H2 sing N N 168 MET CA C sing N N 169 MET CA CB sing N N 170 MET CA HA sing N N 171 MET C O doub N N 172 MET C OXT sing N N 173 MET CB CG sing N N 174 MET CB HB2 sing N N 175 MET CB HB3 sing N N 176 MET CG SD sing N N 177 MET CG HG2 sing N N 178 MET CG HG3 sing N N 179 MET SD CE sing N N 180 MET CE HE1 sing N N 181 MET CE HE2 sing N N 182 MET CE HE3 sing N N 183 MET OXT HXT sing N N 184 PHE N CA sing N N 185 PHE N H sing N N 186 PHE N H2 sing N N 187 PHE CA C sing N N 188 PHE CA CB sing N N 189 PHE CA HA sing N N 190 PHE C O doub N N 191 PHE C OXT sing N N 192 PHE CB CG sing N N 193 PHE CB HB2 sing N N 194 PHE CB HB3 sing N N 195 PHE CG CD1 doub Y N 196 PHE CG CD2 sing Y N 197 PHE CD1 CE1 sing Y N 198 PHE CD1 HD1 sing N N 199 PHE CD2 CE2 doub Y N 200 PHE CD2 HD2 sing N N 201 PHE CE1 CZ doub Y N 202 PHE CE1 HE1 sing N N 203 PHE CE2 CZ sing Y N 204 PHE CE2 HE2 sing N N 205 PHE CZ HZ sing N N 206 PHE OXT HXT sing N N 207 SER N CA sing N N 208 SER N H sing N N 209 SER N H2 sing N N 210 SER CA C sing N N 211 SER CA CB sing N N 212 SER CA HA sing N N 213 SER C O doub N N 214 SER C OXT sing N N 215 SER CB OG sing N N 216 SER CB HB2 sing N N 217 SER CB HB3 sing N N 218 SER OG HG sing N N 219 SER OXT HXT sing N N 220 THR N CA sing N N 221 THR N H sing N N 222 THR N H2 sing N N 223 THR CA C sing N N 224 THR CA CB sing N N 225 THR CA HA sing N N 226 THR C O doub N N 227 THR C OXT sing N N 228 THR CB OG1 sing N N 229 THR CB CG2 sing N N 230 THR CB HB sing N N 231 THR OG1 HG1 sing N N 232 THR CG2 HG21 sing N N 233 THR CG2 HG22 sing N N 234 THR CG2 HG23 sing N N 235 THR OXT HXT sing N N 236 TYR N CA sing N N 237 TYR N H sing N N 238 TYR N H2 sing N N 239 TYR CA C sing N N 240 TYR CA CB sing N N 241 TYR CA HA sing N N 242 TYR C O doub N N 243 TYR C OXT sing N N 244 TYR CB CG sing N N 245 TYR CB HB2 sing N N 246 TYR CB HB3 sing N N 247 TYR CG CD1 doub Y N 248 TYR CG CD2 sing Y N 249 TYR CD1 CE1 sing Y N 250 TYR CD1 HD1 sing N N 251 TYR CD2 CE2 doub Y N 252 TYR CD2 HD2 sing N N 253 TYR CE1 CZ doub Y N 254 TYR CE1 HE1 sing N N 255 TYR CE2 CZ sing Y N 256 TYR CE2 HE2 sing N N 257 TYR CZ OH sing N N 258 TYR OH HH sing N N 259 TYR OXT HXT sing N N 260 VAL N CA sing N N 261 VAL N H sing N N 262 VAL N H2 sing N N 263 VAL CA C sing N N 264 VAL CA CB sing N N 265 VAL CA HA sing N N 266 VAL C O doub N N 267 VAL C OXT sing N N 268 VAL CB CG1 sing N N 269 VAL CB CG2 sing N N 270 VAL CB HB sing N N 271 VAL CG1 HG11 sing N N 272 VAL CG1 HG12 sing N N 273 VAL CG1 HG13 sing N N 274 VAL CG2 HG21 sing N N 275 VAL CG2 HG22 sing N N 276 VAL CG2 HG23 sing N N 277 VAL OXT HXT sing N N 278 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AMX 600' _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 1BY6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_