data_1C7Y # _entry.id 1C7Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1C7Y pdb_00001c7y 10.2210/pdb1c7y/pdb NDB PD0136 ? ? RCSB RCSB001447 ? ? WWPDB D_1000001447 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-07-21 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 1C7Y _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2000-04-03 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1hjp _pdbx_database_related.details 'contains the same protein without DNA' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ariyoshi, M.' 1 'Nishino, T.' 2 'Iwasaki, H.' 3 'Shinagawa, H.' 4 'Morikawa, K.' 5 # _citation.id primary _citation.title 'Crystal structure of the holliday junction DNA in complex with a single RuvA tetramer.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 97 _citation.page_first 8257 _citation.page_last 8262 _citation.year 2000 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10890893 _citation.pdbx_database_id_DOI 10.1073/pnas.140212997 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ariyoshi, M.' 1 ? primary 'Nishino, T.' 2 ? primary 'Iwasaki, H.' 3 ? primary 'Shinagawa, H.' 4 ? primary 'Morikawa, K.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*DAP*DAP*DGP*DTP*DTP*DGP*DGP*DGP*DAP*DTP*DTP*DGP*DT)-3') ; 4061.655 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*DCP*DTP*DGP*DTP*DGP*DTP*DGP*DTP*DAP*DAP*DGP*DC)-3') ; 3693.414 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*DGP*DCP*DTP*DTP*DAP*DCP*DAP*DCP*DAP*DCP*DAP*DGP*DA)-3') ; 3944.601 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DTP*DGP*DAP*DA)-3') ; 3782.476 1 ? ? ? ? 5 polymer syn ;DNA (5'-D(P*DTP*DTP*DCP*DAP*DCP*DCP*DCP*DTP*DAP*DAP*DCP*DCP*DA)-3') ; 3855.539 1 ? ? ? ? 6 polymer syn ;DNA (5'-D(P*DGP*DAP*DCP*DAP*DCP*DAP*DCP*DAP*DTP*DTP*DCP*DG)-3') ; 3631.394 1 ? ? ? ? 7 polymer syn ;DNA (5'-D(P*DCP*DGP*DAP*DAP*DTP*DGP*DTP*DGP*DTP*DGP*DTP*DCP*DT)-3') ; 3997.607 1 ? ? ? ? 8 polymer syn ;DNA (5'-D(P*DCP*DAP*DAP*DTP*DCP*DCP*DCP*DAP*DAP*DCP*DTP*DT)-3') ; 3566.357 1 ? ? ? ? 9 polymer man 'HOLLIDAY JUNCTION DNA HELICASE RUVA' 22111.668 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DT)(DT)(DG)(DG)(DG)(DA)(DT)(DT)(DG)(DT)' AAGTTGGGATTGT B ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DT)(DG)(DT)(DG)(DT)(DA)(DA)(DG)(DC)' CTGTGTGTAAGC C ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DT)(DA)(DC)(DA)(DC)(DA)(DC)(DA)(DG)(DA)' GCTTACACACAGA D ? 4 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DG)(DA)(DA)' GGTTAGGGTGAA E ? 5 polydeoxyribonucleotide no no '(DT)(DT)(DC)(DA)(DC)(DC)(DC)(DT)(DA)(DA)(DC)(DC)(DA)' TTCACCCTAACCA F ? 6 polydeoxyribonucleotide no no '(DG)(DA)(DC)(DA)(DC)(DA)(DC)(DA)(DT)(DT)(DC)(DG)' GACACACATTCG G ? 7 polydeoxyribonucleotide no no '(DC)(DG)(DA)(DA)(DT)(DG)(DT)(DG)(DT)(DG)(DT)(DC)(DT)' CGAATGTGTGTCT H ? 8 polydeoxyribonucleotide no no '(DC)(DA)(DA)(DT)(DC)(DC)(DC)(DA)(DA)(DC)(DT)(DT)' CAATCCCAACTT I ? 9 'polypeptide(L)' no no ;MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL ; ;MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DG n 1 4 DT n 1 5 DT n 1 6 DG n 1 7 DG n 1 8 DG n 1 9 DA n 1 10 DT n 1 11 DT n 1 12 DG n 1 13 DT n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DT n 2 7 DG n 2 8 DT n 2 9 DA n 2 10 DA n 2 11 DG n 2 12 DC n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DT n 3 5 DA n 3 6 DC n 3 7 DA n 3 8 DC n 3 9 DA n 3 10 DC n 3 11 DA n 3 12 DG n 3 13 DA n 4 1 DG n 4 2 DG n 4 3 DT n 4 4 DT n 4 5 DA n 4 6 DG n 4 7 DG n 4 8 DG n 4 9 DT n 4 10 DG n 4 11 DA n 4 12 DA n 5 1 DT n 5 2 DT n 5 3 DC n 5 4 DA n 5 5 DC n 5 6 DC n 5 7 DC n 5 8 DT n 5 9 DA n 5 10 DA n 5 11 DC n 5 12 DC n 5 13 DA n 6 1 DG n 6 2 DA n 6 3 DC n 6 4 DA n 6 5 DC n 6 6 DA n 6 7 DC n 6 8 DA n 6 9 DT n 6 10 DT n 6 11 DC n 6 12 DG n 7 1 DC n 7 2 DG n 7 3 DA n 7 4 DA n 7 5 DT n 7 6 DG n 7 7 DT n 7 8 DG n 7 9 DT n 7 10 DG n 7 11 DT n 7 12 DC n 7 13 DT n 8 1 DC n 8 2 DA n 8 3 DA n 8 4 DT n 8 5 DC n 8 6 DC n 8 7 DC n 8 8 DA n 8 9 DA n 8 10 DC n 8 11 DT n 8 12 DT n 9 1 MET n 9 2 ILE n 9 3 GLY n 9 4 ARG n 9 5 LEU n 9 6 ARG n 9 7 GLY n 9 8 ILE n 9 9 ILE n 9 10 ILE n 9 11 GLU n 9 12 LYS n 9 13 GLN n 9 14 PRO n 9 15 PRO n 9 16 LEU n 9 17 VAL n 9 18 LEU n 9 19 ILE n 9 20 GLU n 9 21 VAL n 9 22 GLY n 9 23 GLY n 9 24 VAL n 9 25 GLY n 9 26 TYR n 9 27 GLU n 9 28 VAL n 9 29 HIS n 9 30 MET n 9 31 PRO n 9 32 MET n 9 33 THR n 9 34 CYS n 9 35 PHE n 9 36 TYR n 9 37 GLU n 9 38 LEU n 9 39 PRO n 9 40 GLU n 9 41 ALA n 9 42 GLY n 9 43 GLN n 9 44 GLU n 9 45 ALA n 9 46 ILE n 9 47 VAL n 9 48 PHE n 9 49 THR n 9 50 HIS n 9 51 PHE n 9 52 VAL n 9 53 VAL n 9 54 ARG n 9 55 GLU n 9 56 ASP n 9 57 ALA n 9 58 GLN n 9 59 LEU n 9 60 LEU n 9 61 TYR n 9 62 GLY n 9 63 PHE n 9 64 ASN n 9 65 ASN n 9 66 LYS n 9 67 GLN n 9 68 GLU n 9 69 ARG n 9 70 THR n 9 71 LEU n 9 72 PHE n 9 73 LYS n 9 74 GLU n 9 75 LEU n 9 76 ILE n 9 77 LYS n 9 78 THR n 9 79 ASN n 9 80 GLY n 9 81 VAL n 9 82 GLY n 9 83 PRO n 9 84 LYS n 9 85 LEU n 9 86 ALA n 9 87 LEU n 9 88 ALA n 9 89 ILE n 9 90 LEU n 9 91 SER n 9 92 GLY n 9 93 MET n 9 94 SER n 9 95 ALA n 9 96 GLN n 9 97 GLN n 9 98 PHE n 9 99 VAL n 9 100 ASN n 9 101 ALA n 9 102 VAL n 9 103 GLU n 9 104 ARG n 9 105 GLU n 9 106 GLU n 9 107 VAL n 9 108 GLY n 9 109 ALA n 9 110 LEU n 9 111 VAL n 9 112 LYS n 9 113 LEU n 9 114 PRO n 9 115 GLY n 9 116 ILE n 9 117 GLY n 9 118 LYS n 9 119 LYS n 9 120 THR n 9 121 ALA n 9 122 GLU n 9 123 ARG n 9 124 LEU n 9 125 ILE n 9 126 VAL n 9 127 GLU n 9 128 MET n 9 129 LYS n 9 130 ASP n 9 131 ARG n 9 132 PHE n 9 133 LYS n 9 134 GLY n 9 135 LEU n 9 136 HIS n 9 137 GLY n 9 138 ASP n 9 139 LEU n 9 140 PHE n 9 141 THR n 9 142 PRO n 9 143 ALA n 9 144 ALA n 9 145 ASP n 9 146 LEU n 9 147 VAL n 9 148 LEU n 9 149 THR n 9 150 SER n 9 151 PRO n 9 152 ALA n 9 153 SER n 9 154 PRO n 9 155 ALA n 9 156 THR n 9 157 ASP n 9 158 ASP n 9 159 ALA n 9 160 GLU n 9 161 GLN n 9 162 GLU n 9 163 ALA n 9 164 VAL n 9 165 ALA n 9 166 ALA n 9 167 LEU n 9 168 VAL n 9 169 ALA n 9 170 LEU n 9 171 GLY n 9 172 TYR n 9 173 LYS n 9 174 PRO n 9 175 GLN n 9 176 GLU n 9 177 ALA n 9 178 SER n 9 179 ARG n 9 180 MET n 9 181 VAL n 9 182 SER n 9 183 LYS n 9 184 ILE n 9 185 ALA n 9 186 ARG n 9 187 PRO n 9 188 ASP n 9 189 ALA n 9 190 SER n 9 191 SER n 9 192 GLU n 9 193 THR n 9 194 LEU n 9 195 ILE n 9 196 ARG n 9 197 GLU n 9 198 ALA n 9 199 LEU n 9 200 ARG n 9 201 ALA n 9 202 ALA n 9 203 LEU n # _entity_src_gen.entity_id 9 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 401 401 DA A B . n A 1 2 DA 2 402 402 DA A B . n A 1 3 DG 3 403 403 DG G B . n A 1 4 DT 4 404 404 DT T B . n A 1 5 DT 5 405 405 DT T B . n A 1 6 DG 6 406 406 DG G B . n A 1 7 DG 7 407 407 DG G B . n A 1 8 DG 8 408 408 DG G B . n A 1 9 DA 9 409 409 DA A B . n A 1 10 DT 10 410 410 DT T B . n A 1 11 DT 11 411 411 DT T B . n A 1 12 DG 12 412 412 DG G B . n A 1 13 DT 13 413 413 DT T B . n B 2 1 DC 1 501 501 DC C C . n B 2 2 DT 2 502 502 DT T C . n B 2 3 DG 3 503 503 DG G C . n B 2 4 DT 4 504 504 DT T C . n B 2 5 DG 5 505 505 DG G C . n B 2 6 DT 6 506 506 DT T C . n B 2 7 DG 7 507 507 DG G C . n B 2 8 DT 8 508 508 DT T C . n B 2 9 DA 9 509 509 DA A C . n B 2 10 DA 10 510 510 DA A C . n B 2 11 DG 11 511 511 DG G C . n B 2 12 DC 12 512 512 DC C C . n C 3 1 DG 1 401 401 DG G D . n C 3 2 DC 2 402 402 DC C D . n C 3 3 DT 3 403 403 DT T D . n C 3 4 DT 4 404 404 DT T D . n C 3 5 DA 5 405 405 DA A D . n C 3 6 DC 6 406 406 DC C D . n C 3 7 DA 7 407 407 DA A D . n C 3 8 DC 8 408 408 DC C D . n C 3 9 DA 9 409 409 DA A D . n C 3 10 DC 10 410 410 DC C D . n C 3 11 DA 11 411 411 DA A D . n C 3 12 DG 12 412 412 DG G D . n C 3 13 DA 13 413 413 DA A D . n D 4 1 DG 1 501 501 DG G E . n D 4 2 DG 2 502 502 DG G E . n D 4 3 DT 3 503 503 DT T E . n D 4 4 DT 4 504 504 DT T E . n D 4 5 DA 5 505 505 DA A E . n D 4 6 DG 6 506 506 DG G E . n D 4 7 DG 7 507 507 DG G E . n D 4 8 DG 8 508 508 DG G E . n D 4 9 DT 9 509 509 DT T E . n D 4 10 DG 10 510 510 DG G E . n D 4 11 DA 11 511 511 DA A E . n D 4 12 DA 12 512 512 DA A E . n E 5 1 DT 1 401 401 DT T F . n E 5 2 DT 2 402 402 DT T F . n E 5 3 DC 3 403 403 DC C F . n E 5 4 DA 4 404 404 DA A F . n E 5 5 DC 5 405 405 DC C F . n E 5 6 DC 6 406 406 DC C F . n E 5 7 DC 7 407 407 DC C F . n E 5 8 DT 8 408 408 DT T F . n E 5 9 DA 9 409 409 DA A F . n E 5 10 DA 10 410 410 DA A F . n E 5 11 DC 11 411 411 DC C F . n E 5 12 DC 12 412 412 DC C F . n E 5 13 DA 13 413 413 DA A F . n F 6 1 DG 1 501 501 DG G G . n F 6 2 DA 2 502 502 DA A G . n F 6 3 DC 3 503 503 DC C G . n F 6 4 DA 4 504 504 DA A G . n F 6 5 DC 5 505 505 DC C G . n F 6 6 DA 6 506 506 DA A G . n F 6 7 DC 7 507 507 DC C G . n F 6 8 DA 8 508 508 DA A G . n F 6 9 DT 9 509 509 DT T G . n F 6 10 DT 10 510 510 DT T G . n F 6 11 DC 11 511 511 DC C G . n F 6 12 DG 12 512 512 DG G G . n G 7 1 DC 1 401 401 DC C H . n G 7 2 DG 2 402 402 DG G H . n G 7 3 DA 3 403 403 DA A H . n G 7 4 DA 4 404 404 DA A H . n G 7 5 DT 5 405 405 DT T H . n G 7 6 DG 6 406 406 DG G H . n G 7 7 DT 7 407 407 DT T H . n G 7 8 DG 8 408 408 DG G H . n G 7 9 DT 9 409 409 DT T H . n G 7 10 DG 10 410 410 DG G H . n G 7 11 DT 11 411 411 DT T H . n G 7 12 DC 12 412 412 DC C H . n G 7 13 DT 13 413 413 DT T H . n H 8 1 DC 1 501 501 DC C I . n H 8 2 DA 2 502 502 DA A I . n H 8 3 DA 3 503 503 DA A I . n H 8 4 DT 4 504 504 DT T I . n H 8 5 DC 5 505 505 DC C I . n H 8 6 DC 6 506 506 DC C I . n H 8 7 DC 7 507 507 DC C I . n H 8 8 DA 8 508 508 DA A I . n H 8 9 DA 9 509 509 DA A I . n H 8 10 DC 10 510 510 DC C I . n H 8 11 DT 11 511 511 DT T I . n H 8 12 DT 12 512 512 DT T I . n I 9 1 MET 1 1 1 MET MET A . n I 9 2 ILE 2 2 2 ILE ILE A . n I 9 3 GLY 3 3 3 GLY GLY A . n I 9 4 ARG 4 4 4 ARG ARG A . n I 9 5 LEU 5 5 5 LEU LEU A . n I 9 6 ARG 6 6 6 ARG ARG A . n I 9 7 GLY 7 7 7 GLY GLY A . n I 9 8 ILE 8 8 8 ILE ILE A . n I 9 9 ILE 9 9 9 ILE ILE A . n I 9 10 ILE 10 10 10 ILE ILE A . n I 9 11 GLU 11 11 11 GLU GLU A . n I 9 12 LYS 12 12 12 LYS LYS A . n I 9 13 GLN 13 13 13 GLN GLN A . n I 9 14 PRO 14 14 14 PRO PRO A . n I 9 15 PRO 15 15 15 PRO PRO A . n I 9 16 LEU 16 16 16 LEU LEU A . n I 9 17 VAL 17 17 17 VAL VAL A . n I 9 18 LEU 18 18 18 LEU LEU A . n I 9 19 ILE 19 19 19 ILE ILE A . n I 9 20 GLU 20 20 20 GLU GLU A . n I 9 21 VAL 21 21 21 VAL VAL A . n I 9 22 GLY 22 22 22 GLY GLY A . n I 9 23 GLY 23 23 23 GLY GLY A . n I 9 24 VAL 24 24 24 VAL VAL A . n I 9 25 GLY 25 25 25 GLY GLY A . n I 9 26 TYR 26 26 26 TYR TYR A . n I 9 27 GLU 27 27 27 GLU GLU A . n I 9 28 VAL 28 28 28 VAL VAL A . n I 9 29 HIS 29 29 29 HIS HIS A . n I 9 30 MET 30 30 30 MET MET A . n I 9 31 PRO 31 31 31 PRO PRO A . n I 9 32 MET 32 32 32 MET MET A . n I 9 33 THR 33 33 33 THR THR A . n I 9 34 CYS 34 34 34 CYS CYS A . n I 9 35 PHE 35 35 35 PHE PHE A . n I 9 36 TYR 36 36 36 TYR TYR A . n I 9 37 GLU 37 37 37 GLU GLU A . n I 9 38 LEU 38 38 38 LEU LEU A . n I 9 39 PRO 39 39 39 PRO PRO A . n I 9 40 GLU 40 40 40 GLU GLU A . n I 9 41 ALA 41 41 41 ALA ALA A . n I 9 42 GLY 42 42 42 GLY GLY A . n I 9 43 GLN 43 43 43 GLN GLN A . n I 9 44 GLU 44 44 44 GLU GLU A . n I 9 45 ALA 45 45 45 ALA ALA A . n I 9 46 ILE 46 46 46 ILE ILE A . n I 9 47 VAL 47 47 47 VAL VAL A . n I 9 48 PHE 48 48 48 PHE PHE A . n I 9 49 THR 49 49 49 THR THR A . n I 9 50 HIS 50 50 50 HIS HIS A . n I 9 51 PHE 51 51 51 PHE PHE A . n I 9 52 VAL 52 52 52 VAL VAL A . n I 9 53 VAL 53 53 53 VAL VAL A . n I 9 54 ARG 54 54 54 ARG ARG A . n I 9 55 GLU 55 55 55 GLU GLU A . n I 9 56 ASP 56 56 56 ASP ASP A . n I 9 57 ALA 57 57 57 ALA ALA A . n I 9 58 GLN 58 58 58 GLN GLN A . n I 9 59 LEU 59 59 59 LEU LEU A . n I 9 60 LEU 60 60 60 LEU LEU A . n I 9 61 TYR 61 61 61 TYR TYR A . n I 9 62 GLY 62 62 62 GLY GLY A . n I 9 63 PHE 63 63 63 PHE PHE A . n I 9 64 ASN 64 64 64 ASN ASN A . n I 9 65 ASN 65 65 65 ASN ASN A . n I 9 66 LYS 66 66 66 LYS LYS A . n I 9 67 GLN 67 67 67 GLN GLN A . n I 9 68 GLU 68 68 68 GLU GLU A . n I 9 69 ARG 69 69 69 ARG ARG A . n I 9 70 THR 70 70 70 THR THR A . n I 9 71 LEU 71 71 71 LEU LEU A . n I 9 72 PHE 72 72 72 PHE PHE A . n I 9 73 LYS 73 73 73 LYS LYS A . n I 9 74 GLU 74 74 74 GLU GLU A . n I 9 75 LEU 75 75 75 LEU LEU A . n I 9 76 ILE 76 76 76 ILE ILE A . n I 9 77 LYS 77 77 77 LYS LYS A . n I 9 78 THR 78 78 78 THR THR A . n I 9 79 ASN 79 79 79 ASN ASN A . n I 9 80 GLY 80 80 80 GLY GLY A . n I 9 81 VAL 81 81 81 VAL VAL A . n I 9 82 GLY 82 82 82 GLY GLY A . n I 9 83 PRO 83 83 83 PRO PRO A . n I 9 84 LYS 84 84 84 LYS LYS A . n I 9 85 LEU 85 85 85 LEU LEU A . n I 9 86 ALA 86 86 86 ALA ALA A . n I 9 87 LEU 87 87 87 LEU LEU A . n I 9 88 ALA 88 88 88 ALA ALA A . n I 9 89 ILE 89 89 89 ILE ILE A . n I 9 90 LEU 90 90 90 LEU LEU A . n I 9 91 SER 91 91 91 SER SER A . n I 9 92 GLY 92 92 92 GLY GLY A . n I 9 93 MET 93 93 93 MET MET A . n I 9 94 SER 94 94 94 SER SER A . n I 9 95 ALA 95 95 95 ALA ALA A . n I 9 96 GLN 96 96 96 GLN GLN A . n I 9 97 GLN 97 97 97 GLN GLN A . n I 9 98 PHE 98 98 98 PHE PHE A . n I 9 99 VAL 99 99 99 VAL VAL A . n I 9 100 ASN 100 100 100 ASN ASN A . n I 9 101 ALA 101 101 101 ALA ALA A . n I 9 102 VAL 102 102 102 VAL VAL A . n I 9 103 GLU 103 103 103 GLU GLU A . n I 9 104 ARG 104 104 104 ARG ARG A . n I 9 105 GLU 105 105 105 GLU GLU A . n I 9 106 GLU 106 106 106 GLU GLU A . n I 9 107 VAL 107 107 107 VAL VAL A . n I 9 108 GLY 108 108 108 GLY GLY A . n I 9 109 ALA 109 109 109 ALA ALA A . n I 9 110 LEU 110 110 110 LEU LEU A . n I 9 111 VAL 111 111 111 VAL VAL A . n I 9 112 LYS 112 112 112 LYS LYS A . n I 9 113 LEU 113 113 113 LEU LEU A . n I 9 114 PRO 114 114 114 PRO PRO A . n I 9 115 GLY 115 115 115 GLY GLY A . n I 9 116 ILE 116 116 116 ILE ILE A . n I 9 117 GLY 117 117 117 GLY GLY A . n I 9 118 LYS 118 118 118 LYS LYS A . n I 9 119 LYS 119 119 119 LYS LYS A . n I 9 120 THR 120 120 120 THR THR A . n I 9 121 ALA 121 121 121 ALA ALA A . n I 9 122 GLU 122 122 122 GLU GLU A . n I 9 123 ARG 123 123 123 ARG ARG A . n I 9 124 LEU 124 124 124 LEU LEU A . n I 9 125 ILE 125 125 125 ILE ILE A . n I 9 126 VAL 126 126 126 VAL VAL A . n I 9 127 GLU 127 127 127 GLU GLU A . n I 9 128 MET 128 128 128 MET MET A . n I 9 129 LYS 129 129 129 LYS LYS A . n I 9 130 ASP 130 130 130 ASP ASP A . n I 9 131 ARG 131 131 131 ARG ARG A . n I 9 132 PHE 132 132 132 PHE PHE A . n I 9 133 LYS 133 133 133 LYS LYS A . n I 9 134 GLY 134 134 134 GLY GLY A . n I 9 135 LEU 135 135 135 LEU LEU A . n I 9 136 HIS 136 136 136 HIS HIS A . n I 9 137 GLY 137 137 137 GLY GLY A . n I 9 138 ASP 138 138 138 ASP ASP A . n I 9 139 LEU 139 139 139 LEU LEU A . n I 9 140 PHE 140 140 140 PHE PHE A . n I 9 141 THR 141 141 141 THR THR A . n I 9 142 PRO 142 142 142 PRO PRO A . n I 9 143 ALA 143 143 143 ALA ALA A . n I 9 144 ALA 144 144 144 ALA ALA A . n I 9 145 ASP 145 145 145 ASP ASP A . n I 9 146 LEU 146 146 146 LEU LEU A . n I 9 147 VAL 147 147 147 VAL VAL A . n I 9 148 LEU 148 148 148 LEU LEU A . n I 9 149 THR 149 149 149 THR THR A . n I 9 150 SER 150 150 150 SER SER A . n I 9 151 PRO 151 151 ? ? ? A . n I 9 152 ALA 152 152 ? ? ? A . n I 9 153 SER 153 153 ? ? ? A . n I 9 154 PRO 154 154 ? ? ? A . n I 9 155 ALA 155 155 155 ALA ALA A . n I 9 156 THR 156 156 156 THR THR A . n I 9 157 ASP 157 157 157 ASP ASP A . n I 9 158 ASP 158 158 158 ASP ASP A . n I 9 159 ALA 159 159 159 ALA ALA A . n I 9 160 GLU 160 160 160 GLU GLU A . n I 9 161 GLN 161 161 161 GLN GLN A . n I 9 162 GLU 162 162 162 GLU GLU A . n I 9 163 ALA 163 163 163 ALA ALA A . n I 9 164 VAL 164 164 164 VAL VAL A . n I 9 165 ALA 165 165 165 ALA ALA A . n I 9 166 ALA 166 166 166 ALA ALA A . n I 9 167 LEU 167 167 167 LEU LEU A . n I 9 168 VAL 168 168 168 VAL VAL A . n I 9 169 ALA 169 169 169 ALA ALA A . n I 9 170 LEU 170 170 170 LEU LEU A . n I 9 171 GLY 171 171 171 GLY GLY A . n I 9 172 TYR 172 172 172 TYR TYR A . n I 9 173 LYS 173 173 173 LYS LYS A . n I 9 174 PRO 174 174 174 PRO PRO A . n I 9 175 GLN 175 175 175 GLN GLN A . n I 9 176 GLU 176 176 176 GLU GLU A . n I 9 177 ALA 177 177 177 ALA ALA A . n I 9 178 SER 178 178 178 SER SER A . n I 9 179 ARG 179 179 179 ARG ARG A . n I 9 180 MET 180 180 180 MET MET A . n I 9 181 VAL 181 181 181 VAL VAL A . n I 9 182 SER 182 182 182 SER SER A . n I 9 183 LYS 183 183 183 LYS LYS A . n I 9 184 ILE 184 184 184 ILE ILE A . n I 9 185 ALA 185 185 185 ALA ALA A . n I 9 186 ARG 186 186 186 ARG ARG A . n I 9 187 PRO 187 187 187 PRO PRO A . n I 9 188 ASP 188 188 188 ASP ASP A . n I 9 189 ALA 189 189 189 ALA ALA A . n I 9 190 SER 190 190 190 SER SER A . n I 9 191 SER 191 191 191 SER SER A . n I 9 192 GLU 192 192 192 GLU GLU A . n I 9 193 THR 193 193 193 THR THR A . n I 9 194 LEU 194 194 194 LEU LEU A . n I 9 195 ILE 195 195 195 ILE ILE A . n I 9 196 ARG 196 196 196 ARG ARG A . n I 9 197 GLU 197 197 197 GLU GLU A . n I 9 198 ALA 198 198 198 ALA ALA A . n I 9 199 LEU 199 199 199 LEU LEU A . n I 9 200 ARG 200 200 200 ARG ARG A . n I 9 201 ALA 201 201 201 ALA ALA A . n I 9 202 ALA 202 202 202 ALA ALA A . n I 9 203 LEU 203 203 203 LEU LEU A . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 MLPHARE phasing . ? 3 CNS refinement 0.9 ? 4 # _cell.length_a 158.65 _cell.length_b 158.65 _cell.length_c 158.65 _cell.angle_alpha 90.0 _cell.angle_beta 90.0 _cell.angle_gamma 90.0 _cell.entry_id 1C7Y _cell.pdbx_unique_axis ? _cell.Z_PDB 48 # _symmetry.space_group_name_H-M 'I 4 3 2' _symmetry.entry_id 1C7Y _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 211 _symmetry.cell_setting cubic # _exptl.crystals_number 1 _exptl.entry_id 1C7Y _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.density_Matthews ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, sodium chloride, glycerol, MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 MES ? ? ? 1 2 1 glycerol ? ? ? 1 3 1 NaCl ? ? ? 1 4 1 '(NH4)2SO4' ? ? ? 1 5 2 glycerol ? ? ? 1 6 2 NaCl ? ? ? 1 7 2 '(NH4)2SO4' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1998-12-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6B' _diffrn_source.pdbx_wavelength 1.000 _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6B _diffrn_source.pdbx_wavelength_list ? # _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 80.0 _reflns.number_all 7136 _reflns.number_obs 7136 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_netI_over_sigmaI 47.0 _reflns.B_iso_Wilson_estimate 34.9 _reflns.pdbx_redundancy 13.4 _reflns.entry_id 1C7Y _reflns.pdbx_Rsym_value ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.275 _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all 691 _reflns_shell.percent_possible_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.ls_d_res_high 3.10 _refine.ls_d_res_low 45.80 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 6491 _refine.ls_number_reflns_obs 6491 _refine.ls_number_reflns_R_free 631 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.25 _refine.ls_R_factor_R_work 0.249 _refine.ls_R_factor_R_free 0.279 _refine.pdbx_stereochemistry_target_values ? _refine.details ? _refine.entry_id 1C7Y _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF 3475770.71 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 9.7 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol 88.2948 _refine.solvent_model_param_ksol 0.425315 _refine.occupancy_max ? _refine.occupancy_min ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1C7Y _refine_analyze.Luzzati_coordinate_error_obs 0.38 _refine_analyze.Luzzati_d_res_low_obs 6.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_sigma_a_obs 0.34 _refine_analyze.Luzzati_sigma_a_free 0.36 _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1527 _refine_hist.pdbx_number_atoms_nucleic_acid 2038 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3565 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 45.80 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.21 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.R_factor_R_free 0.365 _refine_ls_shell.R_factor_R_free_error 0.039 _refine_ls_shell.R_factor_R_work 0.337 _refine_ls_shell.d_res_high 3.10 _refine_ls_shell.d_res_low 3.24 _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.number_reflns_R_free 86 _refine_ls_shell.number_reflns_R_work 705 _refine_ls_shell.percent_reflns_R_free 10.9 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1C7Y _struct.title 'E.COLI RUVA-HOLLIDAY JUNCTION COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'helix-hairpin-helix, protein-DNA complex, homologous recombination, Holliday junction, RECOMBINATION-DNA COMPLEX' _struct_keywords.entry_id 1C7Y _struct_keywords.pdbx_keywords RECOMBINATION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 9 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 9 UNP RUVA_ECOLI P0A809 1 ;MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL ; ? 2 1 PDB 1C7Y 1C7Y ? ? ? 3 2 PDB 1C7Y 1C7Y ? ? ? 4 3 PDB 1C7Y 1C7Y ? ? ? 5 4 PDB 1C7Y 1C7Y ? ? ? 6 5 PDB 1C7Y 1C7Y ? ? ? 7 6 PDB 1C7Y 1C7Y ? ? ? 8 7 PDB 1C7Y 1C7Y ? ? ? 9 8 PDB 1C7Y 1C7Y ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1C7Y A 1 ? 203 ? P0A809 1 ? 203 ? 1 203 2 2 1C7Y B 1 ? 13 ? 1C7Y 401 ? 413 ? 401 413 3 3 1C7Y C 1 ? 12 ? 1C7Y 501 ? 512 ? 501 512 4 4 1C7Y D 1 ? 13 ? 1C7Y 401 ? 413 ? 401 413 5 5 1C7Y E 1 ? 12 ? 1C7Y 501 ? 512 ? 501 512 6 6 1C7Y F 1 ? 13 ? 1C7Y 401 ? 413 ? 401 413 7 7 1C7Y G 1 ? 12 ? 1C7Y 501 ? 512 ? 501 512 8 8 1C7Y H 1 ? 13 ? 1C7Y 401 ? 413 ? 401 413 9 9 1C7Y I 1 ? 12 ? 1C7Y 501 ? 512 ? 501 512 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 36-meric _pdbx_struct_assembly.oligomeric_count 36 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 21_555 z,y,-x 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 4 'crystal symmetry operation' 23_555 -z,y,x 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO I 31 ? TYR I 36 ? PRO A 31 TYR A 36 1 ? 6 HELX_P HELX_P2 2 ASN I 65 ? THR I 78 ? ASN A 65 THR A 78 1 ? 14 HELX_P HELX_P3 3 GLY I 82 ? MET I 93 ? GLY A 82 MET A 93 1 ? 12 HELX_P HELX_P4 4 SER I 94 ? ARG I 104 ? SER A 94 ARG A 104 1 ? 11 HELX_P HELX_P5 5 GLU I 106 ? LYS I 112 ? GLU A 106 LYS A 112 1 ? 7 HELX_P HELX_P6 6 GLY I 117 ? ASP I 130 ? GLY A 117 ASP A 130 1 ? 14 HELX_P HELX_P7 7 ALA I 143 ? SER I 150 ? ALA A 143 SER A 150 1 ? 8 HELX_P HELX_P8 8 ASP I 157 ? LEU I 170 ? ASP A 157 LEU A 170 1 ? 14 HELX_P HELX_P9 9 LYS I 173 ? ALA I 185 ? LYS A 173 ALA A 185 1 ? 13 HELX_P HELX_P10 10 SER I 190 ? LEU I 203 ? SER A 190 LEU A 203 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 2 N6 A ? ? 1_555 B DG 11 O6 A ? B DA 402 C DG 511 1_555 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog2 hydrog ? ? A DG 3 N1 A ? ? 1_555 B DA 10 N1 A ? B DG 403 C DA 510 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog3 hydrog ? ? A DG 3 O6 A ? ? 1_555 B DA 10 N6 A ? B DG 403 C DA 510 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog4 hydrog ? ? A DT 4 N3 A ? ? 1_555 B DA 9 N1 A ? B DT 404 C DA 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 4 O4 A ? ? 1_555 B DA 9 N6 A ? B DT 404 C DA 509 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 6 N1 A ? ? 1_555 B DG 7 O6 A ? B DG 406 C DG 507 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog7 hydrog ? ? A DG 6 O6 A ? ? 1_555 B DG 7 N1 A ? B DG 406 C DG 507 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog8 hydrog ? ? A DG 7 N2 A ? ? 1_555 B DT 6 O2 A ? B DG 407 C DT 506 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog9 hydrog ? ? A DG 8 N2 A ? ? 1_555 B DG 5 N3 A ? B DG 408 C DG 505 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog10 hydrog ? ? A DG 8 N3 A ? ? 1_555 B DG 5 N2 A ? B DG 408 C DG 505 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog11 hydrog ? ? A DA 9 N1 A ? ? 1_555 B DT 4 N3 A ? B DA 409 C DT 504 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 9 N6 A ? ? 1_555 B DT 4 O4 A ? B DA 409 C DT 504 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 10 O2 A ? ? 1_555 B DG 3 N2 A ? B DT 410 C DG 503 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? hydrog14 hydrog ? ? A DG 12 N2 A ? ? 1_555 B DC 1 O2 A ? B DG 412 C DC 501 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 14 _struct_mon_prot_cis.label_asym_id I _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 14 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 15 _struct_mon_prot_cis.pdbx_label_asym_id_2 I _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 15 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.22 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG I 4 ? GLN I 13 ? ARG A 4 GLN A 13 A 2 LEU I 16 ? VAL I 21 ? LEU A 16 VAL A 21 A 3 VAL I 24 ? HIS I 29 ? VAL A 24 HIS A 29 A 4 LEU I 60 ? PHE I 63 ? LEU A 60 PHE A 63 A 5 GLU I 44 ? PHE I 51 ? GLU A 44 PHE A 51 A 6 ARG I 4 ? GLN I 13 ? ARG A 4 GLN A 13 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE I 8 ? N ILE A 8 O GLU I 20 ? O GLU A 20 A 2 3 N VAL I 21 ? N VAL A 21 O VAL I 24 ? O VAL A 24 A 3 4 N HIS I 29 ? N HIS A 29 O LEU I 60 ? O LEU A 60 A 4 5 O TYR I 61 ? O TYR A 61 N HIS I 50 ? N HIS A 50 A 5 6 O ALA I 45 ? O ALA A 45 N GLY I 7 ? N GLY A 7 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP1 E DA 505 ? B NH1 A ARG 123 ? ? 2.14 2 1 OP1 C DG 505 ? A NH1 A ARG 123 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NE A ARG 104 ? ? 1_555 NH1 A ARG 104 ? ? 13_555 1.89 2 1 NH2 A ARG 186 ? ? 1_555 OD2 A ASP 188 ? ? 5_555 1.91 3 1 NH1 A ARG 104 ? ? 1_555 NH1 A ARG 104 ? ? 13_555 2.09 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A ILE 116 ? ? N A GLY 117 ? ? 1.606 1.336 0.270 0.023 Y 2 1 CA A GLY 117 ? ? C A GLY 117 ? ? 1.638 1.514 0.124 0.016 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A VAL 53 ? ? N A ARG 54 ? ? CA A ARG 54 ? ? 139.59 121.70 17.89 2.50 Y 2 1 CB A ARG 54 ? ? CA A ARG 54 ? ? C A ARG 54 ? ? 122.92 110.40 12.52 2.00 N 3 1 CB A ILE 116 ? ? CA A ILE 116 ? ? C A ILE 116 ? ? 83.58 111.60 -28.02 2.00 N 4 1 C A ILE 116 ? ? N A GLY 117 ? ? CA A GLY 117 ? ? 107.30 122.30 -15.00 2.10 Y 5 1 N A GLY 134 ? ? CA A GLY 134 ? ? C A GLY 134 ? ? 83.30 113.10 -29.80 2.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 124 ? ? -47.63 -80.79 2 1 ILE A 125 ? ? -39.10 -32.97 3 1 LYS A 129 ? ? -45.02 -73.63 4 1 PHE A 132 ? ? -54.89 -174.17 5 1 LYS A 133 ? ? 51.22 112.07 6 1 ALA A 185 ? ? 45.44 82.67 7 1 ARG A 186 ? ? -167.88 58.46 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id PHE _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 132 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -14.47 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 ILE _pdbx_validate_polymer_linkage.auth_seq_id_1 116 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 GLY _pdbx_validate_polymer_linkage.auth_seq_id_2 117 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.61 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 151 ? I PRO 151 2 1 Y 1 A ALA 152 ? I ALA 152 3 1 Y 1 A SER 153 ? I SER 153 4 1 Y 1 A PRO 154 ? I PRO 154 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 VAL N N N N 485 VAL CA C N S 486 VAL C C N N 487 VAL O O N N 488 VAL CB C N N 489 VAL CG1 C N N 490 VAL CG2 C N N 491 VAL OXT O N N 492 VAL H H N N 493 VAL H2 H N N 494 VAL HA H N N 495 VAL HB H N N 496 VAL HG11 H N N 497 VAL HG12 H N N 498 VAL HG13 H N N 499 VAL HG21 H N N 500 VAL HG22 H N N 501 VAL HG23 H N N 502 VAL HXT H N N 503 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TYR N CA sing N N 453 TYR N H sing N N 454 TYR N H2 sing N N 455 TYR CA C sing N N 456 TYR CA CB sing N N 457 TYR CA HA sing N N 458 TYR C O doub N N 459 TYR C OXT sing N N 460 TYR CB CG sing N N 461 TYR CB HB2 sing N N 462 TYR CB HB3 sing N N 463 TYR CG CD1 doub Y N 464 TYR CG CD2 sing Y N 465 TYR CD1 CE1 sing Y N 466 TYR CD1 HD1 sing N N 467 TYR CD2 CE2 doub Y N 468 TYR CD2 HD2 sing N N 469 TYR CE1 CZ doub Y N 470 TYR CE1 HE1 sing N N 471 TYR CE2 CZ sing Y N 472 TYR CE2 HE2 sing N N 473 TYR CZ OH sing N N 474 TYR OH HH sing N N 475 TYR OXT HXT sing N N 476 VAL N CA sing N N 477 VAL N H sing N N 478 VAL N H2 sing N N 479 VAL CA C sing N N 480 VAL CA CB sing N N 481 VAL CA HA sing N N 482 VAL C O doub N N 483 VAL C OXT sing N N 484 VAL CB CG1 sing N N 485 VAL CB CG2 sing N N 486 VAL CB HB sing N N 487 VAL CG1 HG11 sing N N 488 VAL CG1 HG12 sing N N 489 VAL CG1 HG13 sing N N 490 VAL CG2 HG21 sing N N 491 VAL CG2 HG22 sing N N 492 VAL CG2 HG23 sing N N 493 VAL OXT HXT sing N N 494 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1C7Y 'double helix' 1C7Y 'b-form double helix' 1C7Y 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 2 1_555 B DG 11 1_555 -1.302 -0.040 0.472 9.086 -3.266 6.473 1 B_DA402:DG511_C B 402 ? C 511 ? ? 11 1 A DG 3 1_555 B DA 10 1_555 -2.126 0.106 0.168 2.513 -2.055 8.328 2 B_DG403:DA510_C B 403 ? C 510 ? 8 5 1 A DT 4 1_555 B DA 9 1_555 -0.135 -0.412 1.257 -11.097 -8.136 6.971 3 B_DT404:DA509_C B 404 ? C 509 ? 20 1 1 A DG 6 1_555 B DG 7 1_555 0.165 -0.664 -0.395 -1.213 2.324 -7.778 4 B_DG406:DG507_C B 406 ? C 507 ? 3 11 1 A DG 7 1_555 B DT 6 1_555 -0.184 -0.117 -0.285 5.395 -12.141 -1.670 5 B_DG407:DT506_C B 407 ? C 506 ? ? ? 1 A DG 8 1_555 B DG 5 1_555 -0.687 -0.458 -0.427 1.549 -2.290 -8.514 6 B_DG408:DG505_C B 408 ? C 505 ? 4 5 1 A DA 9 1_555 B DT 4 1_555 -0.275 -0.706 -0.093 1.503 -8.479 -1.346 7 B_DA409:DT504_C B 409 ? C 504 ? 20 1 1 A DT 10 1_555 B DG 3 1_555 -1.452 -0.052 0.025 12.869 -9.545 -4.115 8 B_DT410:DG503_C B 410 ? C 503 ? ? 1 1 A DG 12 1_555 B DC 1 1_555 1.558 0.451 0.776 -8.522 -11.099 16.021 9 B_DG412:DC501_C B 412 ? C 501 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 2 1_555 B DG 11 1_555 A DG 3 1_555 B DA 10 1_555 0.484 -0.373 3.366 3.168 -2.155 34.381 -0.283 -0.306 3.412 -3.631 -5.340 34.588 1 BB_DA402DG403:DA510DG511_CC B 402 ? C 511 ? B 403 ? C 510 ? 1 A DG 3 1_555 B DA 10 1_555 A DT 4 1_555 B DA 9 1_555 0.092 -0.206 3.916 -7.296 -3.768 44.290 0.138 -0.907 3.859 -4.947 9.579 45.007 2 BB_DG403DT404:DA509DA510_CC B 403 ? C 510 ? B 404 ? C 509 ? 1 A DT 4 1_555 B DA 9 1_555 A DG 6 1_555 B DG 7 1_555 -0.443 -0.077 6.294 11.805 -1.878 75.078 0.045 1.036 6.180 -1.532 -9.629 75.885 3 BB_DT404DG406:DG507DA509_CC B 404 ? C 509 ? B 406 ? C 507 ? 1 A DG 6 1_555 B DG 7 1_555 A DG 7 1_555 B DT 6 1_555 -0.520 0.301 3.054 -3.542 10.460 30.625 -1.219 0.333 3.031 19.044 6.448 32.511 4 BB_DG406DG407:DT506DG507_CC B 406 ? C 507 ? B 407 ? C 506 ? 1 A DG 7 1_555 B DT 6 1_555 A DG 8 1_555 B DG 5 1_555 -0.204 -0.847 3.272 0.446 -0.932 32.063 -1.365 0.450 3.292 -1.688 -0.807 32.080 5 BB_DG407DG408:DG505DT506_CC B 407 ? C 506 ? B 408 ? C 505 ? 1 A DG 8 1_555 B DG 5 1_555 A DA 9 1_555 B DT 4 1_555 0.552 -0.585 3.214 -1.759 9.674 34.301 -2.299 -1.147 2.916 15.999 2.909 35.642 6 BB_DG408DA409:DT504DG505_CC B 408 ? C 505 ? B 409 ? C 504 ? 1 A DA 9 1_555 B DT 4 1_555 A DT 10 1_555 B DG 3 1_555 0.014 1.099 3.147 1.354 -12.868 32.905 3.535 0.158 2.551 -21.701 -2.283 35.292 7 BB_DA409DT410:DG503DT504_CC B 409 ? C 504 ? B 410 ? C 503 ? 1 A DT 10 1_555 B DG 3 1_555 A DG 12 1_555 B DC 1 1_555 0.637 0.683 7.202 -1.333 -1.577 89.378 0.556 -0.513 7.184 -1.121 0.948 89.397 8 BB_DT410DG412:DC501DG503_CC B 410 ? C 503 ? B 412 ? C 501 ? # _atom_sites.entry_id 1C7Y _atom_sites.fract_transf_matrix[1][1] 0.006303 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006303 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006303 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_