HEADER SEED STORAGE PROTEIN 02-JUN-93 1CAW TITLE DETERMINATION OF THREE CRYSTAL STRUCTURES OF CANAVALIN BY MOLECULAR TITLE 2 REPLACEMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CANAVALIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CANAVALIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 7 ORGANISM_COMMON: JACK BEAN; SOURCE 8 ORGANISM_TAXID: 3823 KEYWDS SEED STORAGE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T-P.KO,J.D.NG,J.DAY,A.GREENWOOD,A.MCPHERSON REVDAT 4 07-FEB-24 1CAW 1 REMARK REVDAT 3 13-JUL-11 1CAW 1 VERSN REVDAT 2 24-FEB-09 1CAW 1 VERSN REVDAT 1 31-OCT-93 1CAW 0 JRNL AUTH T.P.KO,J.D.NG,A.GREENWOOD,A.MCPHERSON JRNL TITL DETERMINATION OF THREE CRYSTAL STRUCTURES OF CANAVALIN BY JRNL TITL 2 MOLECULAR REPLACEMENT. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 49 478 1993 JRNL REFN ISSN 0907-4449 JRNL PMID 15299507 JRNL DOI 10.1107/S0907444993004056 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T-P.KO,J.D.NG,J.DAY,A.MCPHERSON REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF CANAVALIN FROM JACK BEAN REMARK 1 TITL 2 (CANAVALIA ENSIFORMIS) REMARK 1 REF PLANT PHYSIOL. V. 101 729 1993 REMARK 1 REFN ISSN 0032-0889 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 10592 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.020 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.910 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CAW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172199. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 68.40000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.49076 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.23333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 68.40000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 39.49076 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 25.23333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 68.40000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 39.49076 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.23333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 78.98152 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 50.46667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 78.98152 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 50.46667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 78.98152 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.46667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 26680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -141.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 260 OG SER B 416 2.10 REMARK 500 O ASN B 299 O SER B 350 2.12 REMARK 500 O ARG B 392 OD1 ASP B 396 2.15 REMARK 500 N VAL B 315 O ALA B 338 2.16 REMARK 500 O GLN A 215 N GLY A 217 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 90 CD GLU A 90 OE1 0.068 REMARK 500 GLU A 114 CD GLU A 114 OE1 0.081 REMARK 500 GLU A 205 CD GLU A 205 OE2 0.083 REMARK 500 GLU A 207 CD GLU A 207 OE1 0.074 REMARK 500 GLU A 213 CD GLU A 213 OE1 0.067 REMARK 500 GLU A 214 CD GLU A 214 OE1 0.070 REMARK 500 GLU A 216 CD GLU A 216 OE2 0.118 REMARK 500 ARG B 252 NE ARG B 252 CZ 0.078 REMARK 500 GLU B 267 CD GLU B 267 OE1 0.070 REMARK 500 GLU B 271 CD GLU B 271 OE1 0.089 REMARK 500 GLU B 290 CD GLU B 290 OE1 0.085 REMARK 500 GLU B 314 CD GLU B 314 OE2 0.080 REMARK 500 GLU B 321 CD GLU B 321 OE2 0.070 REMARK 500 GLU B 329 CD GLU B 329 OE2 0.089 REMARK 500 GLU B 404 CD GLU B 404 OE1 0.073 REMARK 500 GLU B 408 CD GLU B 408 OE2 0.082 REMARK 500 GLU B 411 CD GLU B 411 OE1 0.094 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 49 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 52 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ASP A 76 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 84 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 84 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ASP A 85 CB - CG - OD1 ANGL. DEV. = -6.8 DEGREES REMARK 500 ASP A 85 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 105 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP A 105 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 107 CB - CG - OD1 ANGL. DEV. = -7.1 DEGREES REMARK 500 PRO A 124 C - N - CD ANGL. DEV. = -23.9 DEGREES REMARK 500 ASP A 133 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 PRO A 145 C - N - CD ANGL. DEV. = -17.3 DEGREES REMARK 500 PRO A 151 C - N - CD ANGL. DEV. = -15.3 DEGREES REMARK 500 ASP A 152 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ASN A 153 N - CA - CB ANGL. DEV. = 13.7 DEGREES REMARK 500 ASN A 154 N - CA - C ANGL. DEV. = 16.6 DEGREES REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 167 N - CA - CB ANGL. DEV. = 15.8 DEGREES REMARK 500 ASP A 174 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 PRO A 184 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 PRO A 184 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 204 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 204 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 246 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 246 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 PRO B 248 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 PRO B 248 C - N - CD ANGL. DEV. = -43.9 DEGREES REMARK 500 ARG B 252 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ASP B 255 CB - CG - OD1 ANGL. DEV. = -5.9 DEGREES REMARK 500 ASP B 278 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 278 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG B 334 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 334 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ASP B 344 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 PRO B 353 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 LEU B 379 N - CA - CB ANGL. DEV. = 13.8 DEGREES REMARK 500 HIS B 382 CA - CB - CG ANGL. DEV. = -11.2 DEGREES REMARK 500 GLU B 384 CB - CA - C ANGL. DEV. = 13.8 DEGREES REMARK 500 ASP B 396 CB - CA - C ANGL. DEV. = -12.2 DEGREES REMARK 500 ASP B 396 CB - CG - OD2 ANGL. DEV. = -9.1 DEGREES REMARK 500 PRO B 423 C - N - CD ANGL. DEV. = -17.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 45 -142.62 179.66 REMARK 500 ASN A 46 20.49 -41.15 REMARK 500 ASN A 47 -165.23 -77.94 REMARK 500 ASN A 54 21.85 -151.29 REMARK 500 HIS A 64 -18.29 166.76 REMARK 500 PHE A 73 -54.26 -25.99 REMARK 500 ASN A 82 -75.90 -68.59 REMARK 500 LEU A 83 13.87 -56.66 REMARK 500 ASP A 85 65.36 -114.82 REMARK 500 TYR A 86 126.83 -172.77 REMARK 500 ASN A 96 43.72 99.51 REMARK 500 LEU A 100 156.64 -47.42 REMARK 500 GLU A 114 110.25 148.48 REMARK 500 ASN A 123 -148.30 -112.80 REMARK 500 GLN A 134 118.83 -32.93 REMARK 500 ASP A 136 105.93 -33.03 REMARK 500 ALA A 142 135.67 -15.92 REMARK 500 THR A 144 151.38 -49.03 REMARK 500 ASP A 152 -44.56 2.53 REMARK 500 ASN A 153 76.87 -60.37 REMARK 500 ASN A 154 -44.88 44.75 REMARK 500 PHE A 166 -24.12 -152.02 REMARK 500 LYS A 181 -65.77 -25.15 REMARK 500 LEU A 183 87.05 -171.18 REMARK 500 PRO A 184 -147.54 -50.60 REMARK 500 ASN A 193 -79.56 -53.24 REMARK 500 PRO A 202 159.95 -39.83 REMARK 500 TYR A 203 1.58 -64.35 REMARK 500 GLU A 207 -88.10 -53.65 REMARK 500 GLN A 208 92.90 -53.34 REMARK 500 THR A 209 -32.46 151.88 REMARK 500 GLN A 212 -154.90 -115.24 REMARK 500 GLU A 213 59.22 -144.97 REMARK 500 GLU A 214 106.29 -45.72 REMARK 500 GLN A 215 -131.14 -39.66 REMARK 500 GLU A 216 66.85 -54.61 REMARK 500 VAL A 218 -53.72 -137.24 REMARK 500 LEU B 242 -143.54 63.03 REMARK 500 SER B 243 -39.55 -142.88 REMARK 500 SER B 244 67.08 -53.34 REMARK 500 ASP B 246 -89.62 179.33 REMARK 500 LYS B 247 102.64 -44.95 REMARK 500 PRO B 248 37.86 25.79 REMARK 500 PHE B 249 -111.26 -27.88 REMARK 500 ARG B 277 -42.01 -20.89 REMARK 500 ASP B 280 37.13 77.80 REMARK 500 ASN B 289 138.71 -29.56 REMARK 500 GLU B 290 57.74 -58.63 REMARK 500 PRO B 296 118.80 -12.83 REMARK 500 ARG B 301 -8.15 -140.21 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP B 396 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 214 10.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 1CAW A 44 224 UNP P50477 CANA_CANEN 44 224 DBREF 1CAW B 241 424 UNP P50477 CANA_CANEN 241 424 SEQRES 1 A 181 ALA GLN ASN ASN PRO TYR LEU PHE ARG SER ASN LYS PHE SEQRES 2 A 181 LEU THR LEU PHE LYS ASN GLN HIS GLY SER LEU ARG LEU SEQRES 3 A 181 LEU GLN ARG PHE ASN GLU ASP THR GLU LYS LEU GLU ASN SEQRES 4 A 181 LEU ARG ASP TYR ARG VAL LEU GLU TYR CYS SER LYS PRO SEQRES 5 A 181 ASN THR LEU LEU LEU PRO HIS HIS SER ASP SER ASP LEU SEQRES 6 A 181 LEU VAL LEU VAL LEU GLU GLY GLN ALA ILE LEU VAL LEU SEQRES 7 A 181 VAL ASN PRO ASP GLY ARG ASP THR TYR LYS LEU ASP GLN SEQRES 8 A 181 GLY ASP ALA ILE LYS ILE GLN ALA GLY THR PRO PHE TYR SEQRES 9 A 181 LEU ILE ASN PRO ASP ASN ASN GLN ASN LEU ARG ILE LEU SEQRES 10 A 181 LYS PHE ALA ILE THR PHE ARG ARG PRO GLY THR VAL GLU SEQRES 11 A 181 ASP PHE PHE LEU SER SER THR LYS ARG LEU PRO SER TYR SEQRES 12 A 181 LEU SER ALA PHE SER LYS ASN PHE LEU GLU ALA SER TYR SEQRES 13 A 181 ASP SER PRO TYR ASP GLU ILE GLU GLN THR LEU LEU GLN SEQRES 14 A 181 GLU GLU GLN GLU GLY VAL ILE VAL LYS MET PRO LYS SEQRES 1 B 184 THR LEU SER SER GLN ASP LYS PRO PHE ASN LEU ARG SER SEQRES 2 B 184 ARG ASP PRO ILE TYR SER ASN ASN TYR GLY LYS LEU TYR SEQRES 3 B 184 GLU ILE THR PRO GLU LYS ASN SER GLN LEU ARG ASP LEU SEQRES 4 B 184 ASP ILE LEU LEU ASN CYS LEU GLN MET ASN GLU GLY ALA SEQRES 5 B 184 LEU PHE VAL PRO HIS TYR ASN SER ARG ALA THR VAL ILE SEQRES 6 B 184 LEU VAL ALA ASN GLU GLY ARG ALA GLU VAL GLU LEU VAL SEQRES 7 B 184 GLY LEU GLU GLN GLN GLN GLN GLN GLY LEU GLU SER MET SEQRES 8 B 184 GLN LEU ARG ARG TYR ALA ALA THR LEU SER GLU GLY ASP SEQRES 9 B 184 ILE ILE VAL ILE PRO SER SER PHE PRO VAL ALA LEU LYS SEQRES 10 B 184 ALA ALA SER ASP LEU ASN MET VAL GLY ILE GLY VAL ASN SEQRES 11 B 184 ALA GLU ASN ASN GLU ARG ASN PHE LEU ALA GLY HIS LYS SEQRES 12 B 184 GLU ASN VAL ILE ARG GLN ILE PRO ARG GLN VAL SER ASP SEQRES 13 B 184 LEU THR PHE PRO GLY SER GLY GLU GLU VAL GLU GLU LEU SEQRES 14 B 184 LEU GLU ASN GLN LYS GLU SER TYR PHE VAL ASP GLY GLN SEQRES 15 B 184 PRO ARG HELIX 1 1 SER A 191 ASP A 200 1 10 HELIX 2 2 ILE A 206 LEU A 211 1 6 HELIX 3 3 GLN B 275 LEU B 279 5 5 HELIX 4 4 VAL B 386 ILE B 390 5 5 HELIX 5 5 PRO B 391 PHE B 399 1 9 HELIX 6 6 GLY B 401 GLU B 411 1 11 SHEET 1 A 7 ARG A 52 SER A 53 0 SHEET 2 A 7 ILE B 345 ILE B 348 -1 N ILE B 345 O SER A 53 SHEET 3 A 7 VAL B 304 GLU B 310 -1 O VAL B 304 N ILE B 348 SHEET 4 A 7 LEU B 362 GLY B 368 -1 O ASN B 363 N GLU B 310 SHEET 5 A 7 LEU B 282 MET B 288 -1 O LEU B 282 N GLY B 368 SHEET 6 A 7 GLY B 263 ILE B 268 -1 O LYS B 264 N GLN B 287 SHEET 7 A 7 PRO B 256 ASN B 260 -1 N ILE B 257 O LEU B 265 SHEET 1 B 6 PHE A 56 ASN A 62 0 SHEET 2 B 6 GLY A 65 LEU A 70 -1 O GLY A 65 N ASN A 62 SHEET 3 B 6 ARG A 87 SER A 93 -1 O VAL A 88 N LEU A 70 SHEET 4 B 6 LEU A 157 ALA A 163 -1 N LEU A 157 O SER A 93 SHEET 5 B 6 LEU A 108 GLU A 114 -1 O LEU A 109 N PHE A 162 SHEET 6 B 6 ALA A 137 ILE A 140 -1 O ILE A 138 N VAL A 110 SHEET 1 C 2 THR A 97 LEU A 99 0 SHEET 2 C 2 ILE A 219 LYS A 221 -1 O VAL A 220 N LEU A 98 SHEET 1 D 5 ARG A 127 TYR A 130 0 SHEET 2 D 5 ILE A 118 VAL A 122 -1 N LEU A 119 O TYR A 130 SHEET 3 D 5 PRO A 145 ILE A 149 -1 O PRO A 145 N VAL A 122 SHEET 4 D 5 HIS A 102 SER A 104 -1 O HIS A 102 N PHE A 146 SHEET 5 D 5 ASP A 174 PHE A 176 -1 N PHE A 175 O HIS A 103 SHEET 1 E 2 HIS B 297 ASN B 299 0 SHEET 2 E 2 ARG B 376 PHE B 378 -1 O ASN B 377 N TYR B 298 SHEET 1 F 3 LEU B 333 THR B 339 0 SHEET 2 F 3 ALA B 313 LEU B 320 -1 N VAL B 315 O ALA B 338 SHEET 3 F 3 VAL B 354 ALA B 358 -1 O ALA B 355 N GLU B 316 CRYST1 136.800 136.800 75.700 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007310 0.004220 0.000000 0.00000 SCALE2 0.000000 0.008441 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013210 0.00000