HEADER ELECTRON TRANSPORT 25-FEB-94 1CCH TITLE THE SOLUTION CONFORMATION OF CYTOCHROME C-551 FROM P.STUTZERI ZOBELL TITLE 2 DETERMINED BY NMR+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C551; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS STUTZERI; SOURCE 3 ORGANISM_TAXID: 316 KEYWDS ELECTRON TRANSPORT EXPDTA SOLUTION NMR AUTHOR M.CAI,R.TIMKOVICH REVDAT 4 23-OCT-24 1CCH 1 REMARK REVDAT 3 10-MAR-21 1CCH 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 HETSYN FORMUL LINK ATOM REVDAT 2 24-FEB-09 1CCH 1 VERSN REVDAT 1 30-APR-94 1CCH 0 JRNL AUTH M.CAI,E.G.BRADFORD,R.TIMKOVICH JRNL TITL INVESTIGATION OF THE SOLUTION CONFORMATION OF CYTOCHROME JRNL TITL 2 C-551 FROM PSEUDOMONAS STUTZERI. JRNL REF BIOCHEMISTRY V. 31 8603 1992 JRNL REFN ISSN 0006-2960 JRNL PMID 1327105 JRNL DOI 10.1021/BI00151A030 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CCH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172229. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 77 CG TRP A 77 CD2 -0.105 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 56 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 TRP A 56 CD1 - NE1 - CE2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP A 56 NE1 - CE2 - CZ2 ANGL. DEV. = 8.7 DEGREES REMARK 500 TRP A 56 NE1 - CE2 - CD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP A 77 CG - CD1 - NE1 ANGL. DEV. = -6.6 DEGREES REMARK 500 TRP A 77 CD1 - NE1 - CE2 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 77 NE1 - CE2 - CZ2 ANGL. DEV. = 9.0 DEGREES REMARK 500 TRP A 77 NE1 - CE2 - CD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 8 -71.38 -66.89 REMARK 500 PRO A 11 -4.61 -54.25 REMARK 500 THR A 20 -125.20 -157.57 REMARK 500 LYS A 21 159.95 168.01 REMARK 500 MET A 22 -56.69 -148.87 REMARK 500 TRP A 56 -43.85 -134.63 REMARK 500 PRO A 58 27.16 -67.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 83 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 16 NE2 REMARK 620 2 HEC A 83 NA 89.4 REMARK 620 3 HEC A 83 NB 90.3 89.9 REMARK 620 4 HEC A 83 NC 90.2 179.6 89.9 REMARK 620 5 HEC A 83 ND 89.3 90.1 179.6 90.0 REMARK 620 6 MET A 61 SD 179.4 90.2 90.2 90.2 90.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 83 DBREF 1CCH A 1 82 UNP P00101 CY551_PSEST 23 104 SEQRES 1 A 82 GLN ASP GLY GLU ALA LEU PHE LYS SER LYS PRO CYS ALA SEQRES 2 A 82 ALA CYS HIS SER VAL ASP THR LYS MET VAL GLY PRO ALA SEQRES 3 A 82 LEU LYS GLU VAL ALA ALA LYS ASN ALA GLY VAL GLU GLY SEQRES 4 A 82 ALA ALA ASP THR LEU ALA LEU HIS ILE LYS ASN GLY SER SEQRES 5 A 82 GLN GLY VAL TRP GLY PRO ILE PRO MET PRO PRO ASN PRO SEQRES 6 A 82 VAL THR GLU GLU GLU ALA LYS ILE LEU ALA GLU TRP VAL SEQRES 7 A 82 LEU SER LEU LYS HET HEC A 83 43 HETNAM HEC HEME C FORMUL 2 HEC C34 H34 FE N4 O4 HELIX 1 A1 GLU A 4 SER A 9 1 6 HELIX 2 A2 LEU A 27 LYS A 33 1 7 HELIX 3 A3 ALA A 40 LYS A 49 1 10 HELIX 4 A4 GLU A 69 LEU A 79 1 11 HELIX 5 P1 GLY A 24 ALA A 26 10A VERY SHORT PROLINE HELIX 3 HELIX 6 P2 ILE A 59 PRO A 63 10 5 LINK SG CYS A 12 CAB HEC A 83 1555 1555 1.81 LINK SG CYS A 15 CAC HEC A 83 1555 1555 1.82 LINK NE2 HIS A 16 FE HEC A 83 1555 1555 1.95 LINK SD MET A 61 FE HEC A 83 1555 1555 2.38 SITE 1 AC1 17 CYS A 12 CYS A 15 HIS A 16 LEU A 44 SITE 2 AC1 17 HIS A 47 ILE A 48 SER A 52 GLN A 53 SITE 3 AC1 17 GLY A 54 VAL A 55 TRP A 56 GLY A 57 SITE 4 AC1 17 ILE A 59 MET A 61 PRO A 62 ASN A 64 SITE 5 AC1 17 VAL A 66 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000