HEADER TRANSFERASE(FORMYL) 15-MAY-92 1CDD TITLE STRUCTURES OF APO AND COMPLEXED ESCHERICHIA COLI GLYCINAMIDE TITLE 2 RIBONUCLEOTIDE TRANSFORMYLASE CAVEAT 1CDD CHIRALITY ERROR AT CA CENTER IN GLU 212 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHORIBOSYL-GLYCINAMIDE FORMYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.1.2.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM_STRAIN: K12 KEYWDS TRANSFERASE(FORMYL) EXPDTA X-RAY DIFFRACTION AUTHOR R.J.ALMASSY,C.A.JANSON,C.-C.KAN,Z.HOSTOMSKA REVDAT 4 07-FEB-24 1CDD 1 REMARK REVDAT 3 24-FEB-09 1CDD 1 VERSN REVDAT 2 01-APR-03 1CDD 1 JRNL REVDAT 1 31-OCT-93 1CDD 0 JRNL AUTH R.J.ALMASSY,C.A.JANSON,C.C.KAN,Z.HOSTOMSKA JRNL TITL STRUCTURES OF APO AND COMPLEXED ESCHERICHIA COLI GLYCINAMIDE JRNL TITL 2 RIBONUCLEOTIDE TRANSFORMYLASE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 89 6114 1992 JRNL REFN ISSN 0027-8424 JRNL PMID 1631098 JRNL DOI 10.1073/PNAS.89.13.6114 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.AIMI,H.QIU,J.WILLIAMS,H.ZALKIN,J.E.DIXON REMARK 1 TITL DE NOVO PURINE NUCLEOTIDE BIOSYNTHESIS: CLONING OF HUMAN AND REMARK 1 TITL 2 AVIAN CDNA'S ENCODING THE TRIFUNCTIONAL GLYCINAMIDE REMARK 1 TITL 3 RIBONUCLEOTIDE SYNTHETASE-AMINOIMIDAZOLE RIBONUCLEOTIDE REMARK 1 TITL 4 SYNTHETASE-GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE BY REMARK 1 TITL 5 FUNCTIONAL COMPLEMENTATION IN E. COLI REMARK 1 REF NUCLEIC ACIDS RES. V. 18 6665 1990 REMARK 1 REFN ISSN 0305-1048 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.M.SMITH,H.A.DAUM III REMARK 1 TITL IDENTIFICATION AND NUCLEOTIDE SEQUENCE OF A GENE ENCODING REMARK 1 TITL 2 5'-PHOSPHORIBOSYLGLYCINAMIDE TRANSFORMYLASE IN ESCHERICHIA REMARK 1 TITL 3 COLI K12 REMARK 1 REF J.BIOL.CHEM. V. 262 10565 1987 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2908 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.020 ; NULL REMARK 3 ANGLE DISTANCE (A) : 4.100 ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 RESIDUES 210 - 212 IN CHAIN A HAVE HIGH TEMPERATURE REMARK 3 FACTORS, ARE IN WEAK DENSITY, AND HAVE SIGNIFICANT REMARK 3 DISORDER. REMARK 4 REMARK 4 1CDD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.20000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.20000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 70.45000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.80000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 70.45000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.20000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 70.45000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.80000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.20000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 70.45000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.80000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR MOLECULE 1 (CHAIN A) WHEN REMARK 300 APPLIED TO MOLECULE 2 (CHAIN B) WITH AN RMS DEVIATION OF REMARK 300 0.83 ANGSTROMS FOR 189 CA COORDINATES (APPROXIMATELY A REMARK 300 TWO-FOLD ROTATION, 184 DEGREES). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 211.35000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -48.80000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 51.20000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 110 REMARK 465 LEU A 111 REMARK 465 LEU A 112 REMARK 465 PRO A 113 REMARK 465 LYS A 114 REMARK 465 TYR A 115 REMARK 465 PRO A 116 REMARK 465 GLY A 117 REMARK 465 LEU A 118 REMARK 465 HIS A 119 REMARK 465 THR A 120 REMARK 465 HIS A 121 REMARK 465 ARG A 122 REMARK 465 GLN A 123 REMARK 465 ALA A 124 REMARK 465 LEU A 125 REMARK 465 GLU A 126 REMARK 465 ASN A 127 REMARK 465 GLY A 128 REMARK 465 ASP A 129 REMARK 465 GLU A 130 REMARK 465 GLU A 131 REMARK 465 HIS A 132 REMARK 465 SER B 110 REMARK 465 LEU B 111 REMARK 465 LEU B 112 REMARK 465 PRO B 113 REMARK 465 LYS B 114 REMARK 465 TYR B 115 REMARK 465 PRO B 116 REMARK 465 GLY B 117 REMARK 465 LEU B 118 REMARK 465 HIS B 119 REMARK 465 THR B 120 REMARK 465 HIS B 121 REMARK 465 ARG B 122 REMARK 465 GLN B 123 REMARK 465 ALA B 124 REMARK 465 LEU B 125 REMARK 465 GLU B 126 REMARK 465 ASN B 127 REMARK 465 GLY B 128 REMARK 465 ASP B 129 REMARK 465 GLU B 130 REMARK 465 GLU B 131 REMARK 465 HIS B 132 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 54 NE2 HIS A 54 CD2 -0.068 REMARK 500 HIS A 73 NE2 HIS A 73 CD2 -0.068 REMARK 500 HIS A 99 NE2 HIS A 99 CD2 -0.075 REMARK 500 HIS B 54 NE2 HIS B 54 CD2 -0.071 REMARK 500 HIS B 73 NE2 HIS B 73 CD2 -0.075 REMARK 500 HIS B 99 NE2 HIS B 99 CD2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 1 CA - C - N ANGL. DEV. = 13.6 DEGREES REMARK 500 ILE A 18 CB - CG1 - CD1 ANGL. DEV. = -18.6 DEGREES REMARK 500 ARG A 31 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 47 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 THR A 53 CA - CB - OG1 ANGL. DEV. = -13.7 DEGREES REMARK 500 THR A 53 CA - CB - CG2 ANGL. DEV. = 8.5 DEGREES REMARK 500 PHE A 61 N - CA - C ANGL. DEV. = 16.5 DEGREES REMARK 500 ARG A 64 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 69 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 MET A 77 CA - CB - CG ANGL. DEV. = 12.5 DEGREES REMARK 500 TYR A 78 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 90 CB - CG - CD ANGL. DEV. = 15.8 DEGREES REMARK 500 GLY A 133 CA - C - N ANGL. DEV. = -17.2 DEGREES REMARK 500 THR A 134 C - N - CA ANGL. DEV. = 15.8 DEGREES REMARK 500 THR A 134 CA - CB - CG2 ANGL. DEV. = -13.1 DEGREES REMARK 500 THR A 134 N - CA - C ANGL. DEV. = 19.6 DEGREES REMARK 500 THR A 134 CA - C - N ANGL. DEV. = -15.1 DEGREES REMARK 500 ASP A 141 N - CA - C ANGL. DEV. = 19.1 DEGREES REMARK 500 ASP A 141 CA - C - N ANGL. DEV. = 13.5 DEGREES REMARK 500 ASP A 141 O - C - N ANGL. DEV. = -9.7 DEGREES REMARK 500 TRP A 183 CD1 - CG - CD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 TRP A 183 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 188 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 TRP A 197 CD1 - CG - CD2 ANGL. DEV. = 5.3 DEGREES REMARK 500 TRP A 197 NE1 - CE2 - CZ2 ANGL. DEV. = -6.7 DEGREES REMARK 500 TRP A 197 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 GLN A 201 CB - CA - C ANGL. DEV. = -12.3 DEGREES REMARK 500 TYR A 208 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASN B 10 CA - C - N ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG B 31 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ALA B 32 CB - CA - C ANGL. DEV. = -11.8 DEGREES REMARK 500 VAL B 33 CA - CB - CG2 ANGL. DEV. = -9.4 DEGREES REMARK 500 ALA B 38 CA - C - N ANGL. DEV. = 18.1 DEGREES REMARK 500 ALA B 38 O - C - N ANGL. DEV. = -13.9 DEGREES REMARK 500 ASP B 39 CB - CA - C ANGL. DEV. = -14.9 DEGREES REMARK 500 ASP B 39 N - CA - CB ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG B 45 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 64 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG B 69 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 VAL B 82 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 PHE B 88 CA - C - N ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG B 90 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 PRO B 109 N - CA - C ANGL. DEV. = 21.5 DEGREES REMARK 500 PRO B 109 CA - C - N ANGL. DEV. = -15.8 DEGREES REMARK 500 GLY B 133 CA - C - N ANGL. DEV. = -16.9 DEGREES REMARK 500 GLY B 133 O - C - N ANGL. DEV. = 10.0 DEGREES REMARK 500 THR B 134 C - N - CA ANGL. DEV. = 20.8 DEGREES REMARK 500 THR B 134 CA - CB - OG1 ANGL. DEV. = -15.6 DEGREES REMARK 500 THR B 134 CA - CB - CG2 ANGL. DEV. = 13.0 DEGREES REMARK 500 HIS B 137 CE1 - NE2 - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 67 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 9.44 49.19 REMARK 500 ALA A 40 103.92 -58.15 REMARK 500 PHE A 41 -37.14 -35.23 REMARK 500 ASP A 62 -60.74 65.75 REMARK 500 ALA A 79 79.97 38.98 REMARK 500 ALA A 95 -54.91 129.59 REMARK 500 ALA A 101 -98.64 29.41 REMARK 500 THR A 134 112.66 29.34 REMARK 500 ASP A 141 33.31 -154.47 REMARK 500 GLU A 142 -6.01 62.67 REMARK 500 ASP A 144 37.07 39.19 REMARK 500 ALA A 158 109.72 -54.48 REMARK 500 ALA A 185 57.55 -93.92 REMARK 500 ASP A 186 -4.90 -177.42 REMARK 500 GLU A 193 88.03 25.00 REMARK 500 LEU A 198 -106.38 -85.91 REMARK 500 TYR A 208 155.89 56.89 REMARK 500 ALA A 210 -116.18 170.61 REMARK 500 ASN B 2 75.50 51.77 REMARK 500 ASN B 24 19.51 52.81 REMARK 500 LYS B 27 72.08 -65.13 REMARK 500 ARG B 31 25.88 -71.41 REMARK 500 ALA B 32 133.27 141.23 REMARK 500 ALA B 38 -168.29 -57.11 REMARK 500 ASP B 39 -40.67 55.42 REMARK 500 ALA B 40 91.04 -43.38 REMARK 500 HIS B 54 83.43 -152.21 REMARK 500 LEU B 56 72.32 -109.07 REMARK 500 ALA B 58 -171.80 -68.13 REMARK 500 SER B 59 -34.84 74.64 REMARK 500 LEU B 92 157.76 -46.72 REMARK 500 THR B 134 113.10 97.40 REMARK 500 PHE B 157 98.18 -64.17 REMARK 500 ALA B 158 -30.73 18.57 REMARK 500 GLU B 162 100.59 -46.59 REMARK 500 ASP B 163 -47.67 176.48 REMARK 500 ASN B 194 40.87 38.44 REMARK 500 ASP B 199 50.74 28.35 REMARK 500 ARG B 202 121.53 -33.58 REMARK 500 PRO B 204 156.59 48.97 REMARK 500 PRO B 205 -16.64 -44.96 REMARK 500 TYR B 208 -152.48 -177.59 REMARK 500 ALA B 209 -128.51 -50.21 REMARK 500 ALA B 210 58.07 -63.27 REMARK 500 ASP B 211 -33.75 38.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO B 204 PRO B 205 -147.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 221 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CDE RELATED DB: PDB REMARK 900 TERNARY COMPLEX WITH GLYCINAMIDE RIBONUCLEOTIDE AND THE INHIBITOR 5- REMARK 900 DEAZA-5,6,7,8-TETRAHYDROFOLATE DBREF 1CDD A 1 212 UNP P08179 PUR3_ECOLI 1 212 DBREF 1CDD B 1 212 UNP P08179 PUR3_ECOLI 1 212 SEQRES 1 A 212 MET ASN ILE VAL VAL LEU ILE SER GLY ASN GLY SER ASN SEQRES 2 A 212 LEU GLN ALA ILE ILE ASP ALA CYS LYS THR ASN LYS ILE SEQRES 3 A 212 LYS GLY THR VAL ARG ALA VAL PHE SER ASN LYS ALA ASP SEQRES 4 A 212 ALA PHE GLY LEU GLU ARG ALA ARG GLN ALA GLY ILE ALA SEQRES 5 A 212 THR HIS THR LEU ILE ALA SER ALA PHE ASP SER ARG GLU SEQRES 6 A 212 ALA TYR ASP ARG GLU LEU ILE HIS GLU ILE ASP MET TYR SEQRES 7 A 212 ALA PRO ASP VAL VAL VAL LEU ALA GLY PHE MET ARG ILE SEQRES 8 A 212 LEU SER PRO ALA PHE VAL SER HIS TYR ALA GLY ARG LEU SEQRES 9 A 212 LEU ASN ILE HIS PRO SER LEU LEU PRO LYS TYR PRO GLY SEQRES 10 A 212 LEU HIS THR HIS ARG GLN ALA LEU GLU ASN GLY ASP GLU SEQRES 11 A 212 GLU HIS GLY THR SER VAL HIS PHE VAL THR ASP GLU LEU SEQRES 12 A 212 ASP GLY GLY PRO VAL ILE LEU GLN ALA LYS VAL PRO VAL SEQRES 13 A 212 PHE ALA GLY ASP SER GLU ASP ASP ILE THR ALA ARG VAL SEQRES 14 A 212 GLN THR GLN GLU HIS ALA ILE TYR PRO LEU VAL ILE SER SEQRES 15 A 212 TRP PHE ALA ASP GLY ARG LEU LYS MET HIS GLU ASN ALA SEQRES 16 A 212 ALA TRP LEU ASP GLY GLN ARG LEU PRO PRO GLN GLY TYR SEQRES 17 A 212 ALA ALA ASP GLU SEQRES 1 B 212 MET ASN ILE VAL VAL LEU ILE SER GLY ASN GLY SER ASN SEQRES 2 B 212 LEU GLN ALA ILE ILE ASP ALA CYS LYS THR ASN LYS ILE SEQRES 3 B 212 LYS GLY THR VAL ARG ALA VAL PHE SER ASN LYS ALA ASP SEQRES 4 B 212 ALA PHE GLY LEU GLU ARG ALA ARG GLN ALA GLY ILE ALA SEQRES 5 B 212 THR HIS THR LEU ILE ALA SER ALA PHE ASP SER ARG GLU SEQRES 6 B 212 ALA TYR ASP ARG GLU LEU ILE HIS GLU ILE ASP MET TYR SEQRES 7 B 212 ALA PRO ASP VAL VAL VAL LEU ALA GLY PHE MET ARG ILE SEQRES 8 B 212 LEU SER PRO ALA PHE VAL SER HIS TYR ALA GLY ARG LEU SEQRES 9 B 212 LEU ASN ILE HIS PRO SER LEU LEU PRO LYS TYR PRO GLY SEQRES 10 B 212 LEU HIS THR HIS ARG GLN ALA LEU GLU ASN GLY ASP GLU SEQRES 11 B 212 GLU HIS GLY THR SER VAL HIS PHE VAL THR ASP GLU LEU SEQRES 12 B 212 ASP GLY GLY PRO VAL ILE LEU GLN ALA LYS VAL PRO VAL SEQRES 13 B 212 PHE ALA GLY ASP SER GLU ASP ASP ILE THR ALA ARG VAL SEQRES 14 B 212 GLN THR GLN GLU HIS ALA ILE TYR PRO LEU VAL ILE SER SEQRES 15 B 212 TRP PHE ALA ASP GLY ARG LEU LYS MET HIS GLU ASN ALA SEQRES 16 B 212 ALA TRP LEU ASP GLY GLN ARG LEU PRO PRO GLN GLY TYR SEQRES 17 B 212 ALA ALA ASP GLU HET PO4 A 221 5 HET PO4 B 221 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) HELIX 1 H1 GLY A 11 ASN A 24 1 14 HELIX 2 H2 ALA A 40 GLY A 50 1 11 HELIX 3 H3 SER A 63 ALA A 79 1 17 HELIX 4 H4 SER A 93 ALA A 101 1 9 HELIX 5 H6 SER A 161 GLY A 187 1 27 HELIX 6 H7 GLY B 11 ASN B 24 1 14 HELIX 7 H8 ALA B 40 GLY B 50 1 11 HELIX 8 H9 SER B 63 ALA B 79 1 17 HELIX 9 H10 SER B 93 ALA B 101 1 9 HELIX 10 H12 SER B 161 GLY B 187 1 27 SHEET 1 S1A 7 ALA A 52 SER A 59 0 SHEET 2 S1A 7 ARG A 31 ASN A 36 1 N VAL A 33 O ALA A 52 SHEET 3 S1A 7 MET A 1 SER A 8 1 N ILE A 7 O PHE A 34 SHEET 4 S1A 7 ASP A 81 GLY A 87 1 O VAL A 84 N LEU A 6 SHEET 5 S1A 7 ARG A 103 PRO A 109 1 O LEU A 105 N LEU A 85 SHEET 6 S1A 7 GLY A 133 PHE A 138 -1 N HIS A 137 O ASN A 106 SHEET 7 S1A 7 ILE A 149 ALA A 158 -1 O LEU A 150 N VAL A 136 SHEET 1 S1B 7 ALA B 52 SER B 59 0 SHEET 2 S1B 7 ARG B 31 ASN B 36 1 N VAL B 33 O ALA B 52 SHEET 3 S1B 7 MET B 1 SER B 8 1 N ILE B 7 O PHE B 34 SHEET 4 S1B 7 ASP B 81 GLY B 87 1 O VAL B 84 N LEU B 6 SHEET 5 S1B 7 ARG B 103 PRO B 109 1 O LEU B 105 N LEU B 85 SHEET 6 S1B 7 GLY B 133 PHE B 138 -1 N HIS B 137 O ASN B 106 SHEET 7 S1B 7 ILE B 149 ALA B 158 -1 O LEU B 150 N VAL B 136 SITE 1 AC1 6 ASN A 10 GLY A 11 SER A 12 ASN A 13 SITE 2 AC1 6 ALA A 86 GLU B 212 SITE 1 AC2 5 ASN B 10 GLY B 11 SER B 12 ASN B 13 SITE 2 AC2 5 GLN B 170 CRYST1 140.900 97.600 102.400 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007097 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010246 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009766 0.00000 MTRIX1 1 -0.193910 0.338750 0.920680 112.79000 1 MTRIX2 1 0.434940 -0.811520 0.390200 1.83000 1 MTRIX3 1 0.879330 0.476110 0.010020 -101.45000 1