HEADER VIRAL PROTEIN 02-FEB-94 1CHC TITLE STRUCTURE OF THE C3HC4 DOMAIN BY 1H-NUCLEAR MAGNETIC RESONANCE TITLE 2 SPECTROSCOPY; A NEW STRUCTURAL CLASS OF ZINC-FINGER COMPND MOL_ID: 1; COMPND 2 MOLECULE: EQUINE HERPES VIRUS-1 RING DOMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUID HERPESVIRUS 1; SOURCE 3 ORGANISM_COMMON: EQUINE HERPESVIRUS 1; SOURCE 4 ORGANISM_TAXID: 10326 KEYWDS VIRAL PROTEIN EXPDTA SOLUTION NMR AUTHOR P.N.BARLOW,R.D.EVERETT,B.LUISI REVDAT 4 22-MAY-24 1CHC 1 REMARK REVDAT 3 16-FEB-22 1CHC 1 REMARK LINK REVDAT 2 24-FEB-09 1CHC 1 VERSN REVDAT 1 30-APR-94 1CHC 0 JRNL AUTH P.N.BARLOW,B.LUISI,A.MILNER,M.ELLIOTT,R.EVERETT JRNL TITL STRUCTURE OF THE C3HC4 DOMAIN BY 1H-NUCLEAR MAGNETIC JRNL TITL 2 RESONANCE SPECTROSCOPY. A NEW STRUCTURAL CLASS OF JRNL TITL 3 ZINC-FINGER. JRNL REF J.MOL.BIOL. V. 237 201 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8126734 JRNL DOI 10.1006/JMBI.1994.1222 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.D.EVERETT,P.BARLOW,A.MILNER,B.LUISI,A.ORR,G.HOPE,D.LYON REMARK 1 TITL A NOVEL ARRANGEMENT OF ZINC-BINDING RESIDUES AND SECONDARY REMARK 1 TITL 2 STRUCTURE IN THE C3HC4 MOTIF OF AN ALPHA HERPES VIRUS REMARK 1 TITL 3 PROTEIN FAMILY REMARK 1 REF J.MOL.BIOL. V. 234 1038 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH P.S.FREEMONT,I.M.HANDON,J.TROWSDALE REMARK 1 TITL A NOVEL CYSTEINE-RICH SEQUENCE MOTIF REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 64 483 1991 REMARK 1 REFN ISSN 0092-8674 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1CHC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172323. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 8 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 CYS A 11 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 CYS A 29 CA - CB - SG ANGL. DEV. = 9.7 DEGREES REMARK 500 TYR A 30 CB - CG - CD1 ANGL. DEV. = 3.8 DEGREES REMARK 500 CYS A 32 CA - CB - SG ANGL. DEV. = 9.6 DEGREES REMARK 500 TRP A 36 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 TRP A 36 CD1 - NE1 - CE2 ANGL. DEV. = 7.7 DEGREES REMARK 500 TRP A 36 NE1 - CE2 - CZ2 ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 3 63.63 -106.85 REMARK 500 ALA A 5 161.30 -44.83 REMARK 500 ARG A 7 67.74 -2.18 REMARK 500 CYS A 8 101.09 -10.25 REMARK 500 PRO A 9 -2.70 -49.10 REMARK 500 LEU A 12 60.55 64.85 REMARK 500 ASP A 14 104.81 67.85 REMARK 500 PRO A 15 46.35 -84.28 REMARK 500 SER A 16 -69.17 -22.43 REMARK 500 PRO A 23 37.39 -80.02 REMARK 500 LEU A 25 59.87 3.25 REMARK 500 VAL A 31 37.93 25.36 REMARK 500 PRO A 41 -161.22 -53.08 REMARK 500 THR A 42 79.26 47.55 REMARK 500 CYS A 43 129.28 -9.79 REMARK 500 LYS A 47 57.22 19.78 REMARK 500 VAL A 50 146.04 -24.63 REMARK 500 SER A 59 75.75 4.22 REMARK 500 SER A 61 83.10 137.09 REMARK 500 PHE A 63 179.12 64.39 REMARK 500 ASP A 65 -142.84 -118.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 7 0.31 SIDE CHAIN REMARK 500 ARG A 35 0.28 SIDE CHAIN REMARK 500 ARG A 38 0.32 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 71 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 8 SG REMARK 620 2 CYS A 11 SG 110.8 REMARK 620 3 CYS A 29 SG 103.1 111.0 REMARK 620 4 CYS A 32 SG 115.1 113.7 102.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 70 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 HIS A 26 ND1 107.1 REMARK 620 3 CYS A 43 SG 111.1 109.6 REMARK 620 4 CYS A 46 SG 103.7 112.5 112.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: S1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: TWO REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 70 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 71 DBREF 1CHC A 1 63 UNP P28990 ICP0_EHV1B 1 63 SEQRES 1 A 68 MET ALA THR VAL ALA GLU ARG CYS PRO ILE CYS LEU GLU SEQRES 2 A 68 ASP PRO SER ASN TYR SER MET ALA LEU PRO CYS LEU HIS SEQRES 3 A 68 ALA PHE CYS TYR VAL CYS ILE THR ARG TRP ILE ARG GLN SEQRES 4 A 68 ASN PRO THR CYS PRO LEU CYS LYS VAL PRO VAL GLU SER SEQRES 5 A 68 VAL VAL HIS THR ILE GLU SER ASP SER GLU PHE GLY ASP SEQRES 6 A 68 GLN LEU ILE HET ZN A 70 1 HET ZN A 71 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 VAL A 31 ARG A 38 1RIGHT-HANDED 8 SHEET 1 S1 3 HIS A 26 CYS A 29 0 SHEET 2 S1 3 TYR A 18 LEU A 22 -1 SHEET 3 S1 3 SER A 52 THR A 56 -1 LINK SG CYS A 8 ZN ZN A 71 1555 1555 2.30 LINK SG CYS A 11 ZN ZN A 71 1555 1555 2.30 LINK SG CYS A 24 ZN ZN A 70 1555 1555 2.30 LINK ND1 HIS A 26 ZN ZN A 70 1555 1555 2.00 LINK SG CYS A 29 ZN ZN A 71 1555 1555 2.28 LINK SG CYS A 32 ZN ZN A 71 1555 1555 2.31 LINK SG CYS A 43 ZN ZN A 70 1555 1555 2.30 LINK SG CYS A 46 ZN ZN A 70 1555 1555 2.31 CISPEP 1 LEU A 22 PRO A 23 0 -8.22 SITE 1 S1 4 CYS A 8 CYS A 11 CYS A 29 CYS A 32 SITE 1 TWO 4 CYS A 24 HIS A 26 CYS A 43 CYS A 46 SITE 1 AC1 4 CYS A 24 HIS A 26 CYS A 43 CYS A 46 SITE 1 AC2 4 CYS A 8 CYS A 11 CYS A 29 CYS A 32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000