data_1CLY
#
_entry.id 1CLY
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.399
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1CLY pdb_00001cly 10.2210/pdb1cly/pdb
WWPDB D_1000172384 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1996-08-01
2 'Structure model' 1 1 2008-03-24
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2020-07-29
5 'Structure model' 2 1 2024-11-20
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Non-polymer description'
3 3 'Structure model' 'Version format compliance'
4 4 'Structure model' Advisory
5 4 'Structure model' 'Atomic model'
6 4 'Structure model' 'Data collection'
7 4 'Structure model' 'Derived calculations'
8 4 'Structure model' Other
9 4 'Structure model' 'Structure summary'
10 5 'Structure model' Advisory
11 5 'Structure model' 'Data collection'
12 5 'Structure model' 'Database references'
13 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' chem_comp
3 4 'Structure model' entity
4 4 'Structure model' entity_name_com
5 4 'Structure model' pdbx_branch_scheme
6 4 'Structure model' pdbx_chem_comp_identifier
7 4 'Structure model' pdbx_database_status
8 4 'Structure model' pdbx_entity_branch
9 4 'Structure model' pdbx_entity_branch_descriptor
10 4 'Structure model' pdbx_entity_branch_link
11 4 'Structure model' pdbx_entity_branch_list
12 4 'Structure model' pdbx_entity_nonpoly
13 4 'Structure model' pdbx_molecule_features
14 4 'Structure model' pdbx_nonpoly_scheme
15 4 'Structure model' pdbx_struct_assembly_gen
16 4 'Structure model' pdbx_unobs_or_zero_occ_residues
17 4 'Structure model' struct_asym
18 4 'Structure model' struct_conn
19 4 'Structure model' struct_site
20 4 'Structure model' struct_site_gen
21 5 'Structure model' chem_comp
22 5 'Structure model' chem_comp_atom
23 5 'Structure model' chem_comp_bond
24 5 'Structure model' database_2
25 5 'Structure model' pdbx_entry_details
26 5 'Structure model' pdbx_modification_feature
27 5 'Structure model' pdbx_unobs_or_zero_occ_residues
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.B_iso_or_equiv'
2 4 'Structure model' '_atom_site.Cartn_x'
3 4 'Structure model' '_atom_site.Cartn_y'
4 4 'Structure model' '_atom_site.Cartn_z'
5 4 'Structure model' '_atom_site.auth_asym_id'
6 4 'Structure model' '_atom_site.auth_atom_id'
7 4 'Structure model' '_atom_site.auth_comp_id'
8 4 'Structure model' '_atom_site.auth_seq_id'
9 4 'Structure model' '_atom_site.label_asym_id'
10 4 'Structure model' '_atom_site.label_atom_id'
11 4 'Structure model' '_atom_site.label_comp_id'
12 4 'Structure model' '_atom_site.label_entity_id'
13 4 'Structure model' '_atom_site.type_symbol'
14 4 'Structure model' '_chem_comp.name'
15 4 'Structure model' '_chem_comp.type'
16 4 'Structure model' '_pdbx_database_status.process_site'
17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
18 4 'Structure model' '_struct_conn.pdbx_dist_value'
19 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
26 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
32 5 'Structure model' '_chem_comp.pdbx_synonyms'
33 5 'Structure model' '_database_2.pdbx_DOI'
34 5 'Structure model' '_database_2.pdbx_database_accession'
35 5 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1CLY
_pdbx_database_status.recvd_initial_deposition_date 1995-03-15
_pdbx_database_status.deposit_site ?
_pdbx_database_status.process_site BNL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Sheriff, S.' 1
'Bajorath, J.' 2
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'The x-ray structure of an anti-tumour antibody in complex with antigen.' Nat.Struct.Biol. 2 466 471 1995 NSBIEW US
1072-8368 2024 ? 7664109 10.1038/nsb0695-466
1
;Crystallization and Preliminary X-Ray Analysis of the Monoclonal Anti-Tumor Antibody Br96 and its Complex with the Lewis Y Determinant
;
J.Mol.Biol. 235 372 ? 1994 JMOBAK UK 0022-2836 0070 ? ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Jeffrey, P.D.' 1 ?
primary 'Bajorath, J.' 2 ?
primary 'Chang, C.Y.' 3 ?
primary 'Yelton, D.' 4 ?
primary 'Hellstrom, I.' 5 ?
primary 'Hellstrom, K.E.' 6 ?
primary 'Sheriff, S.' 7 ?
1 'Chang, C.Y.' 8 ?
1 'Jeffrey, P.D.' 9 ?
1 'Bajorath, J.' 10 ?
1 'Hellstrom, I.' 11 ?
1 'Hellstrom, K.E.' 12 ?
1 'Sheriff, S.' 13 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'IGG FAB (HUMAN IGG1, KAPPA)' 24077.883 1 ? ? 'CHIMERIC FRAGMENT (BR96)'
'COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER'
2 polymer man 'IGG FAB (HUMAN IGG1, KAPPA)' 23609.449 1 ? ? 'CHIMERIC FRAGMENT (BR96)'
'COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER'
3 branched man
'alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose'
675.630 1 ? ? ? ?
4 non-polymer syn 'METHYL NONANOATE (ESTER)' 172.265 1 ? ? ? ?
#
loop_
_entity_name_com.entity_id
_entity_name_com.name
1 'CBR96 FAB (IMMUNOGLOBULIN)'
2 'CBR96 FAB (IMMUNOGLOBULIN)'
3 'Lewis Y antigen, beta anomer'
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no
;DVLMTQIPVSLPVSLGDQASISCRSSQIIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ
SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
;
;DVLMTQIPVSLPVSLGDQASISCRSSQIIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ
SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
;
L ?
2 'polypeptide(L)' no no
;EVNLVESGGGLVQPGGSLKVSCVTSGFTFSDYYMYWVRQTPEKRLEWVAYISQGGDITDYPDTVKGRFTISRDNAKNSLY
LQMSRLKSEDTAMYYCARGLDDGAWFAYWGQGTLVTVSVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSW
NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
;
;EVNLVESGGGLVQPGGSLKVSCVTSGFTFSDYYMYWVRQTPEKRLEWVAYISQGGDITDYPDTVKGRFTISRDNAKNSLY
LQMSRLKSEDTAMYYCARGLDDGAWFAYWGQGTLVTVSVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSW
NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
;
H ?
#
_pdbx_entity_nonpoly.entity_id 4
_pdbx_entity_nonpoly.name 'METHYL NONANOATE (ESTER)'
_pdbx_entity_nonpoly.comp_id NON
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ASP n
1 2 VAL n
1 3 LEU n
1 4 MET n
1 5 THR n
1 6 GLN n
1 7 ILE n
1 8 PRO n
1 9 VAL n
1 10 SER n
1 11 LEU n
1 12 PRO n
1 13 VAL n
1 14 SER n
1 15 LEU n
1 16 GLY n
1 17 ASP n
1 18 GLN n
1 19 ALA n
1 20 SER n
1 21 ILE n
1 22 SER n
1 23 CYS n
1 24 ARG n
1 25 SER n
1 26 SER n
1 27 GLN n
1 28 ILE n
1 29 ILE n
1 30 VAL n
1 31 HIS n
1 32 ASN n
1 33 ASN n
1 34 GLY n
1 35 ASN n
1 36 THR n
1 37 TYR n
1 38 LEU n
1 39 GLU n
1 40 TRP n
1 41 TYR n
1 42 LEU n
1 43 GLN n
1 44 LYS n
1 45 PRO n
1 46 GLY n
1 47 GLN n
1 48 SER n
1 49 PRO n
1 50 GLN n
1 51 LEU n
1 52 LEU n
1 53 ILE n
1 54 TYR n
1 55 LYS n
1 56 VAL n
1 57 SER n
1 58 ASN n
1 59 ARG n
1 60 PHE n
1 61 SER n
1 62 GLY n
1 63 VAL n
1 64 PRO n
1 65 ASP n
1 66 ARG n
1 67 PHE n
1 68 SER n
1 69 GLY n
1 70 SER n
1 71 GLY n
1 72 SER n
1 73 GLY n
1 74 THR n
1 75 ASP n
1 76 PHE n
1 77 THR n
1 78 LEU n
1 79 LYS n
1 80 ILE n
1 81 SER n
1 82 ARG n
1 83 VAL n
1 84 GLU n
1 85 ALA n
1 86 GLU n
1 87 ASP n
1 88 LEU n
1 89 GLY n
1 90 VAL n
1 91 TYR n
1 92 TYR n
1 93 CYS n
1 94 PHE n
1 95 GLN n
1 96 GLY n
1 97 SER n
1 98 HIS n
1 99 VAL n
1 100 PRO n
1 101 PHE n
1 102 THR n
1 103 PHE n
1 104 GLY n
1 105 SER n
1 106 GLY n
1 107 THR n
1 108 LYS n
1 109 LEU n
1 110 GLU n
1 111 ILE n
1 112 LYS n
1 113 ARG n
1 114 THR n
1 115 VAL n
1 116 ALA n
1 117 ALA n
1 118 PRO n
1 119 SER n
1 120 VAL n
1 121 PHE n
1 122 ILE n
1 123 PHE n
1 124 PRO n
1 125 PRO n
1 126 SER n
1 127 ASP n
1 128 GLU n
1 129 GLN n
1 130 LEU n
1 131 LYS n
1 132 SER n
1 133 GLY n
1 134 THR n
1 135 ALA n
1 136 SER n
1 137 VAL n
1 138 VAL n
1 139 CYS n
1 140 LEU n
1 141 LEU n
1 142 ASN n
1 143 ASN n
1 144 PHE n
1 145 TYR n
1 146 PRO n
1 147 ARG n
1 148 GLU n
1 149 ALA n
1 150 LYS n
1 151 VAL n
1 152 GLN n
1 153 TRP n
1 154 LYS n
1 155 VAL n
1 156 ASP n
1 157 ASN n
1 158 ALA n
1 159 LEU n
1 160 GLN n
1 161 SER n
1 162 GLY n
1 163 ASN n
1 164 SER n
1 165 GLN n
1 166 GLU n
1 167 SER n
1 168 VAL n
1 169 THR n
1 170 GLU n
1 171 GLN n
1 172 ASP n
1 173 SER n
1 174 LYS n
1 175 ASP n
1 176 SER n
1 177 THR n
1 178 TYR n
1 179 SER n
1 180 LEU n
1 181 SER n
1 182 SER n
1 183 THR n
1 184 LEU n
1 185 THR n
1 186 LEU n
1 187 SER n
1 188 LYS n
1 189 ALA n
1 190 ASP n
1 191 TYR n
1 192 GLU n
1 193 LYS n
1 194 HIS n
1 195 LYS n
1 196 VAL n
1 197 TYR n
1 198 ALA n
1 199 CYS n
1 200 GLU n
1 201 VAL n
1 202 THR n
1 203 HIS n
1 204 GLN n
1 205 GLY n
1 206 LEU n
1 207 SER n
1 208 SER n
1 209 PRO n
1 210 VAL n
1 211 THR n
1 212 LYS n
1 213 SER n
1 214 PHE n
1 215 ASN n
1 216 ARG n
1 217 GLY n
1 218 GLU n
1 219 CYS n
2 1 GLU n
2 2 VAL n
2 3 ASN n
2 4 LEU n
2 5 VAL n
2 6 GLU n
2 7 SER n
2 8 GLY n
2 9 GLY n
2 10 GLY n
2 11 LEU n
2 12 VAL n
2 13 GLN n
2 14 PRO n
2 15 GLY n
2 16 GLY n
2 17 SER n
2 18 LEU n
2 19 LYS n
2 20 VAL n
2 21 SER n
2 22 CYS n
2 23 VAL n
2 24 THR n
2 25 SER n
2 26 GLY n
2 27 PHE n
2 28 THR n
2 29 PHE n
2 30 SER n
2 31 ASP n
2 32 TYR n
2 33 TYR n
2 34 MET n
2 35 TYR n
2 36 TRP n
2 37 VAL n
2 38 ARG n
2 39 GLN n
2 40 THR n
2 41 PRO n
2 42 GLU n
2 43 LYS n
2 44 ARG n
2 45 LEU n
2 46 GLU n
2 47 TRP n
2 48 VAL n
2 49 ALA n
2 50 TYR n
2 51 ILE n
2 52 SER n
2 53 GLN n
2 54 GLY n
2 55 GLY n
2 56 ASP n
2 57 ILE n
2 58 THR n
2 59 ASP n
2 60 TYR n
2 61 PRO n
2 62 ASP n
2 63 THR n
2 64 VAL n
2 65 LYS n
2 66 GLY n
2 67 ARG n
2 68 PHE n
2 69 THR n
2 70 ILE n
2 71 SER n
2 72 ARG n
2 73 ASP n
2 74 ASN n
2 75 ALA n
2 76 LYS n
2 77 ASN n
2 78 SER n
2 79 LEU n
2 80 TYR n
2 81 LEU n
2 82 GLN n
2 83 MET n
2 84 SER n
2 85 ARG n
2 86 LEU n
2 87 LYS n
2 88 SER n
2 89 GLU n
2 90 ASP n
2 91 THR n
2 92 ALA n
2 93 MET n
2 94 TYR n
2 95 TYR n
2 96 CYS n
2 97 ALA n
2 98 ARG n
2 99 GLY n
2 100 LEU n
2 101 ASP n
2 102 ASP n
2 103 GLY n
2 104 ALA n
2 105 TRP n
2 106 PHE n
2 107 ALA n
2 108 TYR n
2 109 TRP n
2 110 GLY n
2 111 GLN n
2 112 GLY n
2 113 THR n
2 114 LEU n
2 115 VAL n
2 116 THR n
2 117 VAL n
2 118 SER n
2 119 VAL n
2 120 ALA n
2 121 SER n
2 122 THR n
2 123 LYS n
2 124 GLY n
2 125 PRO n
2 126 SER n
2 127 VAL n
2 128 PHE n
2 129 PRO n
2 130 LEU n
2 131 ALA n
2 132 PRO n
2 133 SER n
2 134 SER n
2 135 LYS n
2 136 SER n
2 137 THR n
2 138 SER n
2 139 GLY n
2 140 GLY n
2 141 THR n
2 142 ALA n
2 143 ALA n
2 144 LEU n
2 145 GLY n
2 146 CYS n
2 147 LEU n
2 148 VAL n
2 149 LYS n
2 150 ASP n
2 151 TYR n
2 152 PHE n
2 153 PRO n
2 154 GLN n
2 155 PRO n
2 156 VAL n
2 157 THR n
2 158 VAL n
2 159 SER n
2 160 TRP n
2 161 ASN n
2 162 SER n
2 163 GLY n
2 164 ALA n
2 165 LEU n
2 166 THR n
2 167 SER n
2 168 GLY n
2 169 VAL n
2 170 HIS n
2 171 THR n
2 172 PHE n
2 173 PRO n
2 174 ALA n
2 175 VAL n
2 176 LEU n
2 177 GLN n
2 178 SER n
2 179 SER n
2 180 GLY n
2 181 LEU n
2 182 TYR n
2 183 SER n
2 184 LEU n
2 185 SER n
2 186 SER n
2 187 VAL n
2 188 VAL n
2 189 THR n
2 190 VAL n
2 191 PRO n
2 192 SER n
2 193 SER n
2 194 SER n
2 195 LEU n
2 196 GLY n
2 197 THR n
2 198 GLN n
2 199 THR n
2 200 TYR n
2 201 ILE n
2 202 CYS n
2 203 ASN n
2 204 VAL n
2 205 ASN n
2 206 HIS n
2 207 LYS n
2 208 PRO n
2 209 SER n
2 210 ASN n
2 211 THR n
2 212 LYS n
2 213 VAL n
2 214 ASP n
2 215 LYS n
2 216 ARG n
2 217 VAL n
2 218 GLU n
2 219 PRO n
#
loop_
_entity_src_gen.entity_id
_entity_src_gen.pdbx_src_id
_entity_src_gen.pdbx_alt_source_flag
_entity_src_gen.pdbx_seq_type
_entity_src_gen.pdbx_beg_seq_num
_entity_src_gen.pdbx_end_seq_num
_entity_src_gen.gene_src_common_name
_entity_src_gen.gene_src_genus
_entity_src_gen.pdbx_gene_src_gene
_entity_src_gen.gene_src_species
_entity_src_gen.gene_src_strain
_entity_src_gen.gene_src_tissue
_entity_src_gen.gene_src_tissue_fraction
_entity_src_gen.gene_src_details
_entity_src_gen.pdbx_gene_src_fragment
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id
_entity_src_gen.pdbx_gene_src_variant
_entity_src_gen.pdbx_gene_src_cell_line
_entity_src_gen.pdbx_gene_src_atcc
_entity_src_gen.pdbx_gene_src_organ
_entity_src_gen.pdbx_gene_src_organelle
_entity_src_gen.pdbx_gene_src_cell
_entity_src_gen.pdbx_gene_src_cellular_location
_entity_src_gen.host_org_common_name
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id
_entity_src_gen.host_org_genus
_entity_src_gen.pdbx_host_org_gene
_entity_src_gen.pdbx_host_org_organ
_entity_src_gen.host_org_species
_entity_src_gen.pdbx_host_org_tissue
_entity_src_gen.pdbx_host_org_tissue_fraction
_entity_src_gen.pdbx_host_org_strain
_entity_src_gen.pdbx_host_org_variant
_entity_src_gen.pdbx_host_org_cell_line
_entity_src_gen.pdbx_host_org_atcc
_entity_src_gen.pdbx_host_org_culture_collection
_entity_src_gen.pdbx_host_org_cell
_entity_src_gen.pdbx_host_org_organelle
_entity_src_gen.pdbx_host_org_cellular_location
_entity_src_gen.pdbx_host_org_vector_type
_entity_src_gen.pdbx_host_org_vector
_entity_src_gen.host_org_details
_entity_src_gen.expression_system_id
_entity_src_gen.plasmid_name
_entity_src_gen.plasmid_details
_entity_src_gen.pdbx_description
1 1 sample ? ? ? human Homo ? ? ? ? ? ? 'CH1, IGG1' 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
?
;HYBRIDOMA PRODUCED BY FUSIONING BALB/C SPLEEN CELLS WITH P2X63-AG 8.653 MOUSE MYELOMA CELLS. HUMAN CONSTANT REGIONS INTRODUCED BY HOMOLOGOUS RECOMBINATION
;
2 1 sample ? ? ? human Homo ? ? ? ? ? ? 'CH1, IGG1' 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
?
;HYBRIDOMA PRODUCED BY FUSIONING BALB/C SPLEEN CELLS WITH P2X63-AG 8.653 MOUSE MYELOMA CELLS. HUMAN CONSTANT REGIONS INTRODUCED BY HOMOLOGOUS RECOMBINATION
;
#
_pdbx_entity_branch.entity_id 3
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 3 'LFucpa1-2DGalpb1-4[LFucpa1-3]DGlcpNAcb1-ROH'
'Glycam Condensed Sequence' GMML 1.0
2 3 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5][a2112h-1b_1-5]/1-2-3-2/a3-b1_a4-c1_c2-d1' WURCS PDB2Glycan 1.1.0
3 3 '[][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 3 2 GAL C1 O1 1 NAG O4 HO4 sing ?
2 3 3 FUC C1 O1 2 GAL O2 HO2 sing ?
3 3 4 FUC C1 O1 1 NAG O3 HO3 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose
'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose'
'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
NON non-polymer . 'METHYL NONANOATE (ESTER)' ? 'C10 H20 O2' 172.265
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa
FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose
FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp
FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ASP 1 1 ? ? ? L . n
A 1 2 VAL 2 2 ? ? ? L . n
A 1 3 LEU 3 3 3 LEU LEU L . n
A 1 4 MET 4 4 4 MET MET L . n
A 1 5 THR 5 5 5 THR THR L . n
A 1 6 GLN 6 6 6 GLN GLN L . n
A 1 7 ILE 7 7 7 ILE ILE L . n
A 1 8 PRO 8 8 8 PRO PRO L . n
A 1 9 VAL 9 9 9 VAL VAL L . n
A 1 10 SER 10 10 10 SER SER L . n
A 1 11 LEU 11 11 11 LEU LEU L . n
A 1 12 PRO 12 12 12 PRO PRO L . n
A 1 13 VAL 13 13 13 VAL VAL L . n
A 1 14 SER 14 14 14 SER SER L . n
A 1 15 LEU 15 15 15 LEU LEU L . n
A 1 16 GLY 16 16 16 GLY GLY L . n
A 1 17 ASP 17 17 17 ASP ASP L . n
A 1 18 GLN 18 18 18 GLN GLN L . n
A 1 19 ALA 19 19 19 ALA ALA L . n
A 1 20 SER 20 20 20 SER SER L . n
A 1 21 ILE 21 21 21 ILE ILE L . n
A 1 22 SER 22 22 22 SER SER L . n
A 1 23 CYS 23 23 23 CYS CYS L . n
A 1 24 ARG 24 24 24 ARG ARG L . n
A 1 25 SER 25 25 25 SER SER L . n
A 1 26 SER 26 26 26 SER SER L . n
A 1 27 GLN 27 27 27 GLN GLN L . n
A 1 28 ILE 28 27 27 ILE ILE L A n
A 1 29 ILE 29 27 27 ILE ILE L B n
A 1 30 VAL 30 27 27 VAL VAL L C n
A 1 31 HIS 31 27 27 HIS HIS L D n
A 1 32 ASN 32 27 27 ASN ASN L E n
A 1 33 ASN 33 28 28 ASN ASN L . n
A 1 34 GLY 34 29 29 GLY GLY L . n
A 1 35 ASN 35 30 30 ASN ASN L . n
A 1 36 THR 36 31 31 THR THR L . n
A 1 37 TYR 37 32 32 TYR TYR L . n
A 1 38 LEU 38 33 33 LEU LEU L . n
A 1 39 GLU 39 34 34 GLU GLU L . n
A 1 40 TRP 40 35 35 TRP TRP L . n
A 1 41 TYR 41 36 36 TYR TYR L . n
A 1 42 LEU 42 37 37 LEU LEU L . n
A 1 43 GLN 43 38 38 GLN GLN L . n
A 1 44 LYS 44 39 39 LYS LYS L . n
A 1 45 PRO 45 40 40 PRO PRO L . n
A 1 46 GLY 46 41 41 GLY GLY L . n
A 1 47 GLN 47 42 42 GLN GLN L . n
A 1 48 SER 48 43 43 SER SER L . n
A 1 49 PRO 49 44 44 PRO PRO L . n
A 1 50 GLN 50 45 45 GLN GLN L . n
A 1 51 LEU 51 46 46 LEU LEU L . n
A 1 52 LEU 52 47 47 LEU LEU L . n
A 1 53 ILE 53 48 48 ILE ILE L . n
A 1 54 TYR 54 49 49 TYR TYR L . n
A 1 55 LYS 55 50 50 LYS LYS L . n
A 1 56 VAL 56 51 51 VAL VAL L . n
A 1 57 SER 57 52 52 SER SER L . n
A 1 58 ASN 58 53 53 ASN ASN L . n
A 1 59 ARG 59 54 54 ARG ARG L . n
A 1 60 PHE 60 55 55 PHE PHE L . n
A 1 61 SER 61 56 56 SER SER L . n
A 1 62 GLY 62 57 57 GLY GLY L . n
A 1 63 VAL 63 58 58 VAL VAL L . n
A 1 64 PRO 64 59 59 PRO PRO L . n
A 1 65 ASP 65 60 60 ASP ASP L . n
A 1 66 ARG 66 61 61 ARG ARG L . n
A 1 67 PHE 67 62 62 PHE PHE L . n
A 1 68 SER 68 63 63 SER SER L . n
A 1 69 GLY 69 64 64 GLY GLY L . n
A 1 70 SER 70 65 65 SER SER L . n
A 1 71 GLY 71 66 66 GLY GLY L . n
A 1 72 SER 72 67 67 SER SER L . n
A 1 73 GLY 73 68 68 GLY GLY L . n
A 1 74 THR 74 69 69 THR THR L . n
A 1 75 ASP 75 70 70 ASP ASP L . n
A 1 76 PHE 76 71 71 PHE PHE L . n
A 1 77 THR 77 72 72 THR THR L . n
A 1 78 LEU 78 73 73 LEU LEU L . n
A 1 79 LYS 79 74 74 LYS LYS L . n
A 1 80 ILE 80 75 75 ILE ILE L . n
A 1 81 SER 81 76 76 SER SER L . n
A 1 82 ARG 82 77 77 ARG ARG L . n
A 1 83 VAL 83 78 78 VAL VAL L . n
A 1 84 GLU 84 79 79 GLU GLU L . n
A 1 85 ALA 85 80 80 ALA ALA L . n
A 1 86 GLU 86 81 81 GLU GLU L . n
A 1 87 ASP 87 82 82 ASP ASP L . n
A 1 88 LEU 88 83 83 LEU LEU L . n
A 1 89 GLY 89 84 84 GLY GLY L . n
A 1 90 VAL 90 85 85 VAL VAL L . n
A 1 91 TYR 91 86 86 TYR TYR L . n
A 1 92 TYR 92 87 87 TYR TYR L . n
A 1 93 CYS 93 88 88 CYS CYS L . n
A 1 94 PHE 94 89 89 PHE PHE L . n
A 1 95 GLN 95 90 90 GLN GLN L . n
A 1 96 GLY 96 91 91 GLY GLY L . n
A 1 97 SER 97 92 92 SER SER L . n
A 1 98 HIS 98 93 93 HIS HIS L . n
A 1 99 VAL 99 94 94 VAL VAL L . n
A 1 100 PRO 100 95 95 PRO PRO L . n
A 1 101 PHE 101 96 96 PHE PHE L . n
A 1 102 THR 102 97 97 THR THR L . n
A 1 103 PHE 103 98 98 PHE PHE L . n
A 1 104 GLY 104 99 99 GLY GLY L . n
A 1 105 SER 105 100 100 SER SER L . n
A 1 106 GLY 106 101 101 GLY GLY L . n
A 1 107 THR 107 102 102 THR THR L . n
A 1 108 LYS 108 103 103 LYS LYS L . n
A 1 109 LEU 109 104 104 LEU LEU L . n
A 1 110 GLU 110 105 105 GLU GLU L . n
A 1 111 ILE 111 106 106 ILE ILE L . n
A 1 112 LYS 112 107 107 LYS LYS L . n
A 1 113 ARG 113 108 108 ARG ARG L . n
A 1 114 THR 114 109 109 THR THR L . n
A 1 115 VAL 115 110 110 VAL VAL L . n
A 1 116 ALA 116 111 111 ALA ALA L . n
A 1 117 ALA 117 112 112 ALA ALA L . n
A 1 118 PRO 118 113 113 PRO PRO L . n
A 1 119 SER 119 114 114 SER SER L . n
A 1 120 VAL 120 115 115 VAL VAL L . n
A 1 121 PHE 121 116 116 PHE PHE L . n
A 1 122 ILE 122 117 117 ILE ILE L . n
A 1 123 PHE 123 118 118 PHE PHE L . n
A 1 124 PRO 124 119 119 PRO PRO L . n
A 1 125 PRO 125 120 120 PRO PRO L . n
A 1 126 SER 126 121 121 SER SER L . n
A 1 127 ASP 127 122 122 ASP ASP L . n
A 1 128 GLU 128 123 123 GLU GLU L . n
A 1 129 GLN 129 124 124 GLN GLN L . n
A 1 130 LEU 130 125 125 LEU LEU L . n
A 1 131 LYS 131 126 126 LYS LYS L . n
A 1 132 SER 132 127 127 SER SER L . n
A 1 133 GLY 133 128 128 GLY GLY L . n
A 1 134 THR 134 129 129 THR THR L . n
A 1 135 ALA 135 130 130 ALA ALA L . n
A 1 136 SER 136 131 131 SER SER L . n
A 1 137 VAL 137 132 132 VAL VAL L . n
A 1 138 VAL 138 133 133 VAL VAL L . n
A 1 139 CYS 139 134 134 CYS CYS L . n
A 1 140 LEU 140 135 135 LEU LEU L . n
A 1 141 LEU 141 136 136 LEU LEU L . n
A 1 142 ASN 142 137 137 ASN ASN L . n
A 1 143 ASN 143 138 138 ASN ASN L . n
A 1 144 PHE 144 139 139 PHE PHE L . n
A 1 145 TYR 145 140 140 TYR TYR L . n
A 1 146 PRO 146 141 141 PRO PRO L . n
A 1 147 ARG 147 142 142 ARG ARG L . n
A 1 148 GLU 148 143 143 GLU GLU L . n
A 1 149 ALA 149 144 144 ALA ALA L . n
A 1 150 LYS 150 145 145 LYS LYS L . n
A 1 151 VAL 151 146 146 VAL VAL L . n
A 1 152 GLN 152 147 147 GLN GLN L . n
A 1 153 TRP 153 148 148 TRP TRP L . n
A 1 154 LYS 154 149 149 LYS LYS L . n
A 1 155 VAL 155 150 150 VAL VAL L . n
A 1 156 ASP 156 151 151 ASP ASP L . n
A 1 157 ASN 157 152 152 ASN ASN L . n
A 1 158 ALA 158 153 153 ALA ALA L . n
A 1 159 LEU 159 154 154 LEU LEU L . n
A 1 160 GLN 160 155 155 GLN GLN L . n
A 1 161 SER 161 156 156 SER SER L . n
A 1 162 GLY 162 157 157 GLY GLY L . n
A 1 163 ASN 163 158 158 ASN ASN L . n
A 1 164 SER 164 159 159 SER SER L . n
A 1 165 GLN 165 160 160 GLN GLN L . n
A 1 166 GLU 166 161 161 GLU GLU L . n
A 1 167 SER 167 162 162 SER SER L . n
A 1 168 VAL 168 163 163 VAL VAL L . n
A 1 169 THR 169 164 164 THR THR L . n
A 1 170 GLU 170 165 165 GLU GLU L . n
A 1 171 GLN 171 166 166 GLN GLN L . n
A 1 172 ASP 172 167 167 ASP ASP L . n
A 1 173 SER 173 168 168 SER SER L . n
A 1 174 LYS 174 169 169 LYS LYS L . n
A 1 175 ASP 175 170 170 ASP ASP L . n
A 1 176 SER 176 171 171 SER SER L . n
A 1 177 THR 177 172 172 THR THR L . n
A 1 178 TYR 178 173 173 TYR TYR L . n
A 1 179 SER 179 174 174 SER SER L . n
A 1 180 LEU 180 175 175 LEU LEU L . n
A 1 181 SER 181 176 176 SER SER L . n
A 1 182 SER 182 177 177 SER SER L . n
A 1 183 THR 183 178 178 THR THR L . n
A 1 184 LEU 184 179 179 LEU LEU L . n
A 1 185 THR 185 180 180 THR THR L . n
A 1 186 LEU 186 181 181 LEU LEU L . n
A 1 187 SER 187 182 182 SER SER L . n
A 1 188 LYS 188 183 183 LYS LYS L . n
A 1 189 ALA 189 184 184 ALA ALA L . n
A 1 190 ASP 190 185 185 ASP ASP L . n
A 1 191 TYR 191 186 186 TYR TYR L . n
A 1 192 GLU 192 187 187 GLU GLU L . n
A 1 193 LYS 193 188 188 LYS LYS L . n
A 1 194 HIS 194 189 189 HIS HIS L . n
A 1 195 LYS 195 190 190 LYS LYS L . n
A 1 196 VAL 196 191 191 VAL VAL L . n
A 1 197 TYR 197 192 192 TYR TYR L . n
A 1 198 ALA 198 193 193 ALA ALA L . n
A 1 199 CYS 199 194 194 CYS CYS L . n
A 1 200 GLU 200 195 195 GLU GLU L . n
A 1 201 VAL 201 196 196 VAL VAL L . n
A 1 202 THR 202 197 197 THR THR L . n
A 1 203 HIS 203 198 198 HIS HIS L . n
A 1 204 GLN 204 199 199 GLN GLN L . n
A 1 205 GLY 205 200 200 GLY GLY L . n
A 1 206 LEU 206 201 201 LEU LEU L . n
A 1 207 SER 207 202 202 SER SER L . n
A 1 208 SER 208 203 203 SER SER L . n
A 1 209 PRO 209 204 204 PRO PRO L . n
A 1 210 VAL 210 205 205 VAL VAL L . n
A 1 211 THR 211 206 206 THR THR L . n
A 1 212 LYS 212 207 207 LYS LYS L . n
A 1 213 SER 213 208 208 SER SER L . n
A 1 214 PHE 214 209 209 PHE PHE L . n
A 1 215 ASN 215 210 210 ASN ASN L . n
A 1 216 ARG 216 211 211 ARG ARG L . n
A 1 217 GLY 217 212 212 GLY GLY L . n
A 1 218 GLU 218 213 213 GLU GLU L . n
A 1 219 CYS 219 214 214 CYS CYS L . n
B 2 1 GLU 1 1 1 GLU GLU H . n
B 2 2 VAL 2 2 2 VAL VAL H . n
B 2 3 ASN 3 3 3 ASN ASN H . n
B 2 4 LEU 4 4 4 LEU LEU H . n
B 2 5 VAL 5 5 5 VAL VAL H . n
B 2 6 GLU 6 6 6 GLU GLU H . n
B 2 7 SER 7 7 7 SER SER H . n
B 2 8 GLY 8 8 8 GLY GLY H . n
B 2 9 GLY 9 9 9 GLY GLY H . n
B 2 10 GLY 10 10 10 GLY GLY H . n
B 2 11 LEU 11 11 11 LEU LEU H . n
B 2 12 VAL 12 12 12 VAL VAL H . n
B 2 13 GLN 13 13 13 GLN GLN H . n
B 2 14 PRO 14 14 14 PRO PRO H . n
B 2 15 GLY 15 15 15 GLY GLY H . n
B 2 16 GLY 16 16 16 GLY GLY H . n
B 2 17 SER 17 17 17 SER SER H . n
B 2 18 LEU 18 18 18 LEU LEU H . n
B 2 19 LYS 19 19 19 LYS LYS H . n
B 2 20 VAL 20 20 20 VAL VAL H . n
B 2 21 SER 21 21 21 SER SER H . n
B 2 22 CYS 22 22 22 CYS CYS H . n
B 2 23 VAL 23 23 23 VAL VAL H . n
B 2 24 THR 24 24 24 THR THR H . n
B 2 25 SER 25 25 25 SER SER H . n
B 2 26 GLY 26 26 26 GLY GLY H . n
B 2 27 PHE 27 27 27 PHE PHE H . n
B 2 28 THR 28 28 28 THR THR H . n
B 2 29 PHE 29 29 29 PHE PHE H . n
B 2 30 SER 30 30 30 SER SER H . n
B 2 31 ASP 31 31 31 ASP ASP H . n
B 2 32 TYR 32 32 32 TYR TYR H . n
B 2 33 TYR 33 33 33 TYR TYR H . n
B 2 34 MET 34 34 34 MET MET H . n
B 2 35 TYR 35 35 35 TYR TYR H . n
B 2 36 TRP 36 36 36 TRP TRP H . n
B 2 37 VAL 37 37 37 VAL VAL H . n
B 2 38 ARG 38 38 38 ARG ARG H . n
B 2 39 GLN 39 39 39 GLN GLN H . n
B 2 40 THR 40 40 40 THR THR H . n
B 2 41 PRO 41 41 41 PRO PRO H . n
B 2 42 GLU 42 42 42 GLU GLU H . n
B 2 43 LYS 43 43 43 LYS LYS H . n
B 2 44 ARG 44 44 44 ARG ARG H . n
B 2 45 LEU 45 45 45 LEU LEU H . n
B 2 46 GLU 46 46 46 GLU GLU H . n
B 2 47 TRP 47 47 47 TRP TRP H . n
B 2 48 VAL 48 48 48 VAL VAL H . n
B 2 49 ALA 49 49 49 ALA ALA H . n
B 2 50 TYR 50 50 50 TYR TYR H . n
B 2 51 ILE 51 51 51 ILE ILE H . n
B 2 52 SER 52 52 52 SER SER H . n
B 2 53 GLN 53 52 52 GLN GLN H A n
B 2 54 GLY 54 53 53 GLY GLY H . n
B 2 55 GLY 55 54 54 GLY GLY H . n
B 2 56 ASP 56 55 55 ASP ASP H . n
B 2 57 ILE 57 56 56 ILE ILE H . n
B 2 58 THR 58 57 57 THR THR H . n
B 2 59 ASP 59 58 58 ASP ASP H . n
B 2 60 TYR 60 59 59 TYR TYR H . n
B 2 61 PRO 61 60 60 PRO PRO H . n
B 2 62 ASP 62 61 61 ASP ASP H . n
B 2 63 THR 63 62 62 THR THR H . n
B 2 64 VAL 64 63 63 VAL VAL H . n
B 2 65 LYS 65 64 64 LYS LYS H . n
B 2 66 GLY 66 65 65 GLY GLY H . n
B 2 67 ARG 67 66 66 ARG ARG H . n
B 2 68 PHE 68 67 67 PHE PHE H . n
B 2 69 THR 69 68 68 THR THR H . n
B 2 70 ILE 70 69 69 ILE ILE H . n
B 2 71 SER 71 70 70 SER SER H . n
B 2 72 ARG 72 71 71 ARG ARG H . n
B 2 73 ASP 73 72 72 ASP ASP H . n
B 2 74 ASN 74 73 73 ASN ASN H . n
B 2 75 ALA 75 74 74 ALA ALA H . n
B 2 76 LYS 76 75 75 LYS LYS H . n
B 2 77 ASN 77 76 76 ASN ASN H . n
B 2 78 SER 78 77 77 SER SER H . n
B 2 79 LEU 79 78 78 LEU LEU H . n
B 2 80 TYR 80 79 79 TYR TYR H . n
B 2 81 LEU 81 80 80 LEU LEU H . n
B 2 82 GLN 82 81 81 GLN GLN H . n
B 2 83 MET 83 82 82 MET MET H . n
B 2 84 SER 84 82 82 SER SER H A n
B 2 85 ARG 85 82 82 ARG ARG H B n
B 2 86 LEU 86 82 82 LEU LEU H C n
B 2 87 LYS 87 83 83 LYS LYS H . n
B 2 88 SER 88 84 84 SER SER H . n
B 2 89 GLU 89 85 85 GLU GLU H . n
B 2 90 ASP 90 86 86 ASP ASP H . n
B 2 91 THR 91 87 87 THR THR H . n
B 2 92 ALA 92 88 88 ALA ALA H . n
B 2 93 MET 93 89 89 MET MET H . n
B 2 94 TYR 94 90 90 TYR TYR H . n
B 2 95 TYR 95 91 91 TYR TYR H . n
B 2 96 CYS 96 92 92 CYS CYS H . n
B 2 97 ALA 97 93 93 ALA ALA H . n
B 2 98 ARG 98 94 94 ARG ARG H . n
B 2 99 GLY 99 95 95 GLY GLY H . n
B 2 100 LEU 100 96 96 LEU LEU H . n
B 2 101 ASP 101 97 97 ASP ASP H . n
B 2 102 ASP 102 98 98 ASP ASP H . n
B 2 103 GLY 103 99 99 GLY GLY H . n
B 2 104 ALA 104 100 100 ALA ALA H . n
B 2 105 TRP 105 100 100 TRP TRP H A n
B 2 106 PHE 106 100 100 PHE PHE H B n
B 2 107 ALA 107 101 101 ALA ALA H . n
B 2 108 TYR 108 102 102 TYR TYR H . n
B 2 109 TRP 109 103 103 TRP TRP H . n
B 2 110 GLY 110 104 104 GLY GLY H . n
B 2 111 GLN 111 105 105 GLN GLN H . n
B 2 112 GLY 112 106 106 GLY GLY H . n
B 2 113 THR 113 107 107 THR THR H . n
B 2 114 LEU 114 108 108 LEU LEU H . n
B 2 115 VAL 115 109 109 VAL VAL H . n
B 2 116 THR 116 110 110 THR THR H . n
B 2 117 VAL 117 111 111 VAL VAL H . n
B 2 118 SER 118 112 112 SER SER H . n
B 2 119 VAL 119 113 113 VAL VAL H . n
B 2 120 ALA 120 114 114 ALA ALA H . n
B 2 121 SER 121 115 115 SER SER H . n
B 2 122 THR 122 116 116 THR THR H . n
B 2 123 LYS 123 117 117 LYS LYS H . n
B 2 124 GLY 124 118 118 GLY GLY H . n
B 2 125 PRO 125 119 119 PRO PRO H . n
B 2 126 SER 126 120 120 SER SER H . n
B 2 127 VAL 127 121 121 VAL VAL H . n
B 2 128 PHE 128 122 122 PHE PHE H . n
B 2 129 PRO 129 123 123 PRO PRO H . n
B 2 130 LEU 130 124 124 LEU LEU H . n
B 2 131 ALA 131 125 125 ALA ALA H . n
B 2 132 PRO 132 126 126 PRO PRO H . n
B 2 133 SER 133 127 127 SER SER H . n
B 2 134 SER 134 128 128 SER SER H . n
B 2 135 LYS 135 129 129 LYS LYS H . n
B 2 136 SER 136 130 130 SER SER H . n
B 2 137 THR 137 133 133 THR THR H . n
B 2 138 SER 138 134 134 SER SER H . n
B 2 139 GLY 139 135 135 GLY GLY H . n
B 2 140 GLY 140 136 136 GLY GLY H . n
B 2 141 THR 141 137 137 THR THR H . n
B 2 142 ALA 142 138 138 ALA ALA H . n
B 2 143 ALA 143 139 139 ALA ALA H . n
B 2 144 LEU 144 140 140 LEU LEU H . n
B 2 145 GLY 145 141 141 GLY GLY H . n
B 2 146 CYS 146 142 142 CYS CYS H . n
B 2 147 LEU 147 143 143 LEU LEU H . n
B 2 148 VAL 148 144 144 VAL VAL H . n
B 2 149 LYS 149 145 145 LYS LYS H . n
B 2 150 ASP 150 146 146 ASP ASP H . n
B 2 151 TYR 151 147 147 TYR TYR H . n
B 2 152 PHE 152 148 148 PHE PHE H . n
B 2 153 PRO 153 149 149 PRO PRO H . n
B 2 154 GLN 154 150 150 GLN GLN H . n
B 2 155 PRO 155 151 151 PRO PRO H . n
B 2 156 VAL 156 152 152 VAL VAL H . n
B 2 157 THR 157 153 153 THR THR H . n
B 2 158 VAL 158 154 154 VAL VAL H . n
B 2 159 SER 159 156 156 SER SER H . n
B 2 160 TRP 160 157 157 TRP TRP H . n
B 2 161 ASN 161 162 162 ASN ASN H . n
B 2 162 SER 162 163 163 SER SER H . n
B 2 163 GLY 163 164 164 GLY GLY H . n
B 2 164 ALA 164 165 165 ALA ALA H . n
B 2 165 LEU 165 166 166 LEU LEU H . n
B 2 166 THR 166 167 167 THR THR H . n
B 2 167 SER 167 168 168 SER SER H . n
B 2 168 GLY 168 169 169 GLY GLY H . n
B 2 169 VAL 169 171 171 VAL VAL H . n
B 2 170 HIS 170 172 172 HIS HIS H . n
B 2 171 THR 171 173 173 THR THR H . n
B 2 172 PHE 172 174 174 PHE PHE H . n
B 2 173 PRO 173 175 175 PRO PRO H . n
B 2 174 ALA 174 176 176 ALA ALA H . n
B 2 175 VAL 175 177 177 VAL VAL H . n
B 2 176 LEU 176 178 178 LEU LEU H . n
B 2 177 GLN 177 179 179 GLN GLN H . n
B 2 178 SER 178 180 180 SER SER H . n
B 2 179 SER 179 182 182 SER SER H . n
B 2 180 GLY 180 183 183 GLY GLY H . n
B 2 181 LEU 181 184 184 LEU LEU H . n
B 2 182 TYR 182 185 185 TYR TYR H . n
B 2 183 SER 183 186 186 SER SER H . n
B 2 184 LEU 184 187 187 LEU LEU H . n
B 2 185 SER 185 188 188 SER SER H . n
B 2 186 SER 186 189 189 SER SER H . n
B 2 187 VAL 187 190 190 VAL VAL H . n
B 2 188 VAL 188 191 191 VAL VAL H . n
B 2 189 THR 189 192 192 THR THR H . n
B 2 190 VAL 190 193 193 VAL VAL H . n
B 2 191 PRO 191 194 194 PRO PRO H . n
B 2 192 SER 192 195 195 SER SER H . n
B 2 193 SER 193 196 196 SER SER H . n
B 2 194 SER 194 197 197 SER SER H . n
B 2 195 LEU 195 198 198 LEU LEU H . n
B 2 196 GLY 196 199 199 GLY GLY H . n
B 2 197 THR 197 200 200 THR THR H . n
B 2 198 GLN 198 203 203 GLN GLN H . n
B 2 199 THR 199 205 205 THR THR H . n
B 2 200 TYR 200 206 206 TYR TYR H . n
B 2 201 ILE 201 207 207 ILE ILE H . n
B 2 202 CYS 202 208 208 CYS CYS H . n
B 2 203 ASN 203 209 209 ASN ASN H . n
B 2 204 VAL 204 210 210 VAL VAL H . n
B 2 205 ASN 205 211 211 ASN ASN H . n
B 2 206 HIS 206 212 212 HIS HIS H . n
B 2 207 LYS 207 213 213 LYS LYS H . n
B 2 208 PRO 208 214 214 PRO PRO H . n
B 2 209 SER 209 215 215 SER SER H . n
B 2 210 ASN 210 216 216 ASN ASN H . n
B 2 211 THR 211 217 217 THR THR H . n
B 2 212 LYS 212 218 218 LYS LYS H . n
B 2 213 VAL 213 219 219 VAL VAL H . n
B 2 214 ASP 214 220 220 ASP ASP H . n
B 2 215 LYS 215 221 221 LYS LYS H . n
B 2 216 ARG 216 222 222 ARG ARG H . n
B 2 217 VAL 217 223 223 VAL VAL H . n
B 2 218 GLU 218 226 226 GLU GLU H . n
B 2 219 PRO 219 227 227 PRO PRO H . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 3 NAG 1 A NAG 1 Y NAG 3 n
C 3 GAL 2 A GAL 2 Y GAL 2 n
C 3 FUC 3 A FUC 3 Y FUC 1 n
C 3 FUC 4 A FUC 4 Y FUC 4 n
#
_pdbx_nonpoly_scheme.asym_id D
_pdbx_nonpoly_scheme.entity_id 4
_pdbx_nonpoly_scheme.mon_id NON
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 232
_pdbx_nonpoly_scheme.auth_seq_num 5
_pdbx_nonpoly_scheme.pdb_mon_id NON
_pdbx_nonpoly_scheme.auth_mon_id NON
_pdbx_nonpoly_scheme.pdb_strand_id H
_pdbx_nonpoly_scheme.pdb_ins_code .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 H GLU 1 ? CG ? B GLU 1 CG
2 1 Y 1 H GLU 1 ? CD ? B GLU 1 CD
3 1 Y 1 H GLU 1 ? OE1 ? B GLU 1 OE1
4 1 Y 1 H GLU 1 ? OE2 ? B GLU 1 OE2
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
R-AXIS 'data collection' . ? 1
R-AXIS 'data reduction' . ? 2
X-PLOR refinement . ? 3
R-AXIS 'data scaling' . ? 4
#
_cell.entry_id 1CLY
_cell.length_a 81.700
_cell.length_b 81.700
_cell.length_c 166.300
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1CLY
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
#
_exptl.entry_id 1CLY
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.8
_exptl_crystal.density_percent_sol 56.
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 7.5
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details 'pH 7.5'
#
_diffrn.id 1
_diffrn.ambient_temp 295
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS IIC'
_diffrn_detector.pdbx_collection_date 1993-07
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'GRAPHITE(002)'
_diffrn_radiation.pdbx_diffrn_protocol ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU RUH2R'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1CLY
_reflns.observed_criterion_sigma_I 0.0
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 57.8
_reflns.d_resolution_high 2.51
_reflns.number_obs 20051
_reflns.number_all ?
_reflns.percent_possible_obs 91.7
_reflns.pdbx_Rmerge_I_obs 0.059
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 11.9
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 3.
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 2.51
_reflns_shell.d_res_low 2.75
_reflns_shell.percent_possible_all 90.8
_reflns_shell.Rmerge_I_obs 0.305
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 2.0
_reflns_shell.pdbx_redundancy ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 1CLY
_refine.ls_number_reflns_obs 17177
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 1.
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.
_refine.ls_d_res_high 2.5
_refine.ls_percent_reflns_obs 91.
_refine.ls_R_factor_obs 0.238
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.238
_refine.ls_R_factor_R_free 0.298
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 10.
_refine.ls_number_reflns_R_free 1741
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean 47.7
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method 'EX POST FACTO'
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 1CLY
_refine_analyze.Luzzati_coordinate_error_obs 0.37
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 3337
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 58
_refine_hist.number_atoms_solvent 0
_refine_hist.number_atoms_total 3395
_refine_hist.d_res_high 2.5
_refine_hist.d_res_low 8.
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d 27.1 ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d 1.3 ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used ?
_refine_ls_shell.d_res_high 2.50
_refine_ls_shell.d_res_low 2.61
_refine_ls_shell.number_reflns_R_work 1558
_refine_ls_shell.R_factor_R_work 0.334
_refine_ls_shell.percent_reflns_obs 71.7
_refine_ls_shell.R_factor_R_free 0.376
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free 7.5
_refine_ls_shell.number_reflns_R_free 160
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 'PARHCSDX.PRO (ENGH & HUBE' 'TOPHCSDX.PRO (ENGH & HUBER)' 'X-RAY DIFFRACTION'
2 PARAME_MOD.CHO TOPH3.CHO 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 1CLY
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1CLY
_struct.title
'IGG FAB (HUMAN IGG1, KAPPA) CHIMERIC FRAGMENT (CBR96) COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1CLY
_struct_keywords.pdbx_keywords IMMUNOGLOBULIN
_struct_keywords.text 'IMMUNOGLOBULIN, IMMUNOGLOBULIN C REGION, GLYCOPROTEIN, ANTIB'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
1 1 PDB 1CLY 1CLY ? ? ?
2 2 PDB 1CLY 1CLY ? ? ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1CLY L 1 ? 219 ? 1CLY 1 ? 214 ? 1 214
2 2 1CLY H 1 ? 219 ? 1CLY 1 ? 227 ? 1 227
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 5640 ?
1 MORE -2 ?
1 'SSA (A^2)' 18870 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ALA A 85 ? ASP A 87 ? ALA L 80 ASP L 82 5 ? 3
HELX_P HELX_P2 2 ASP A 127 ? LEU A 130 ? ASP L 122 LEU L 125 1 ? 4
HELX_P HELX_P3 3 LYS A 188 ? GLU A 192 ? LYS L 183 GLU L 187 1 ? 5
HELX_P HELX_P4 4 PHE B 29 ? ASP B 31 ? PHE H 29 ASP H 31 5 ? 3
HELX_P HELX_P5 5 ASP B 62 ? VAL B 64 ? ASP H 61 VAL H 63 5 ? 3
HELX_P HELX_P6 6 ASN B 74 ? LYS B 76 ? ASN H 73 LYS H 75 5 ? 3
HELX_P HELX_P7 7 SER B 88 ? ASP B 90 ? SER H 84 ASP H 86 5 ? 3
HELX_P HELX_P8 8 ASN B 161 ? GLY B 163 ? ASN H 162 GLY H 164 5 ? 3
HELX_P HELX_P9 9 SER B 192 ? SER B 194 ? SER H 195 SER H 197 5 ? 3
HELX_P HELX_P10 10 LYS B 207 ? SER B 209 ? LYS H 213 SER H 215 5 ? 3
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.030 ? ?
disulf2 disulf ? ? A CYS 139 SG ? ? ? 1_555 A CYS 199 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.027 ? ?
disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.029 ? ?
disulf4 disulf ? ? B CYS 146 SG ? ? ? 1_555 B CYS 202 SG ? ? H CYS 142 H CYS 208 1_555 ? ? ? ? ? ? ? 2.019 ? ?
covale1 covale one ? D NON . C9 ? ? ? 1_555 C NAG . O1 ? ? H NON 232 A NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? ?
covale2 covale both ? C NAG . O4 ? ? ? 1_555 C GAL . C1 ? ? A NAG 1 A GAL 2 1_555 ? ? ? ? ? ? ? 1.399 ? ?
covale3 covale both ? C NAG . O3 ? ? ? 1_555 C FUC . C1 ? ? A NAG 1 A FUC 4 1_555 ? ? ? ? ? ? ? 1.414 ? ?
covale4 covale both ? C GAL . O2 ? ? ? 1_555 C FUC . C1 ? ? A GAL 2 A FUC 3 1_555 ? ? ? ? ? ? ? 1.390 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 CYS A 23 ? CYS A 93 ? CYS L 23 ? 1_555 CYS L 88 ? 1_555 SG SG . . . None 'Disulfide bridge'
2 CYS A 139 ? CYS A 199 ? CYS L 134 ? 1_555 CYS L 194 ? 1_555 SG SG . . . None 'Disulfide bridge'
3 CYS B 22 ? CYS B 96 ? CYS H 22 ? 1_555 CYS H 92 ? 1_555 SG SG . . . None 'Disulfide bridge'
4 CYS B 146 ? CYS B 202 ? CYS H 142 ? 1_555 CYS H 208 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 ILE 7 A . ? ILE 7 L PRO 8 A ? PRO 8 L 1 -0.28
2 VAL 99 A . ? VAL 94 L PRO 100 A ? PRO 95 L 1 0.06
3 TYR 145 A . ? TYR 140 L PRO 146 A ? PRO 141 L 1 -0.43
4 PHE 152 B . ? PHE 148 H PRO 153 B ? PRO 149 H 1 -0.34
5 GLN 154 B . ? GLN 150 H PRO 155 B ? PRO 151 H 1 0.41
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 4 ?
B ? 5 ?
C ? 4 ?
D ? 3 ?
E ? 4 ?
F ? 5 ?
G ? 4 ?
H ? 3 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
B 1 2 ? parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
C 1 2 ? anti-parallel
C 2 3 ? anti-parallel
C 3 4 ? anti-parallel
D 1 2 ? anti-parallel
D 2 3 ? anti-parallel
E 1 2 ? anti-parallel
E 2 3 ? anti-parallel
E 3 4 ? anti-parallel
F 1 2 ? anti-parallel
F 2 3 ? anti-parallel
F 3 4 ? anti-parallel
F 4 5 ? anti-parallel
G 1 2 ? anti-parallel
G 2 3 ? anti-parallel
G 3 4 ? anti-parallel
H 1 2 ? anti-parallel
H 2 3 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 MET A 4 ? ILE A 7 ? MET L 4 ILE L 7
A 2 ALA A 19 ? SER A 25 ? ALA L 19 SER L 25
A 3 ASP A 75 ? ILE A 80 ? ASP L 70 ILE L 75
A 4 PHE A 67 ? SER A 72 ? PHE L 62 SER L 67
B 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14
B 2 THR A 107 ? LYS A 112 ? THR L 102 LYS L 107
B 3 GLY A 89 ? GLN A 95 ? GLY L 84 GLN L 90
B 4 LEU A 38 ? GLN A 43 ? LEU L 33 GLN L 38
B 5 GLN A 50 ? ILE A 53 ? GLN L 45 ILE L 48
C 1 SER A 119 ? PHE A 123 ? SER L 114 PHE L 118
C 2 ALA A 135 ? ASN A 142 ? ALA L 130 ASN L 137
C 3 LEU A 180 ? LEU A 186 ? LEU L 175 LEU L 181
C 4 SER A 164 ? VAL A 168 ? SER L 159 VAL L 163
D 1 ALA A 149 ? VAL A 155 ? ALA L 144 VAL L 150
D 2 VAL A 196 ? HIS A 203 ? VAL L 191 HIS L 198
D 3 VAL A 210 ? ASN A 215 ? VAL L 205 ASN L 210
E 1 ASN B 3 ? SER B 7 ? ASN H 3 SER H 7
E 2 SER B 17 ? SER B 25 ? SER H 17 SER H 25
E 3 SER B 78 ? SER B 84 A SER H 77 SER H 82
E 4 PHE B 68 ? ASP B 73 ? PHE H 67 ASP H 72
F 1 THR B 113 ? VAL B 115 ? THR H 107 VAL H 109
F 2 ALA B 92 ? ARG B 98 ? ALA H 88 ARG H 94
F 3 MET B 34 ? THR B 40 ? MET H 34 THR H 40
F 4 LEU B 45 ? ILE B 51 ? LEU H 45 ILE H 51
F 5 THR B 58 ? TYR B 60 ? THR H 57 TYR H 59
G 1 SER B 126 ? LEU B 130 ? SER H 120 LEU H 124
G 2 ALA B 142 ? LYS B 149 ? ALA H 138 LYS H 145
G 3 LEU B 184 ? VAL B 190 ? LEU H 187 VAL H 193
G 4 VAL B 169 ? THR B 171 ? VAL H 171 THR H 173
H 1 THR B 157 ? TRP B 160 ? THR H 153 TRP H 157
H 2 TYR B 200 ? HIS B 206 ? TYR H 206 HIS H 212
H 3 THR B 211 ? VAL B 217 ? THR H 217 VAL H 223
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 O THR A 5 ? O THR L 5 N ARG A 24 ? N ARG L 24
A 2 3 O ALA A 19 ? O ALA L 19 N ILE A 80 ? N ILE L 75
A 3 4 O ASP A 75 ? O ASP L 70 N SER A 72 ? N SER L 67
B 1 2 O LEU A 11 ? O LEU L 11 N LYS A 108 ? N LYS L 103
B 2 3 O THR A 107 ? O THR L 102 N TYR A 91 ? N TYR L 86
B 3 4 O VAL A 90 ? O VAL L 85 N GLN A 43 ? N GLN L 38
B 4 5 O TRP A 40 ? O TRP L 35 N ILE A 53 ? N ILE L 48
C 1 2 O SER A 119 ? O SER L 114 N ASN A 142 ? N ASN L 137
C 2 3 O ALA A 135 ? O ALA L 130 N LEU A 186 ? N LEU L 181
C 3 4 O SER A 181 ? O SER L 176 N SER A 167 ? N SER L 162
D 1 2 O LYS A 150 ? O LYS L 145 N THR A 202 ? N THR L 197
D 2 3 O TYR A 197 ? O TYR L 192 N PHE A 214 ? N PHE L 209
E 1 2 O ASN B 3 ? O ASN H 3 N SER B 25 ? N SER H 25
E 2 3 O LEU B 18 ? O LEU H 18 N MET B 83 ? N MET H 82
E 3 4 O SER B 78 ? O SER H 77 N ASP B 73 ? N ASP H 72
F 1 2 O THR B 113 ? O THR H 107 N TYR B 94 ? N TYR H 90
F 2 3 O MET B 93 ? O MET H 89 N GLN B 39 ? N GLN H 39
F 3 4 O MET B 34 ? O MET H 34 N ILE B 51 ? N ILE H 51
F 4 5 O TYR B 50 ? O TYR H 50 N ASP B 59 ? N ASP H 58
G 1 2 O SER B 126 ? O SER H 120 N LYS B 149 ? N LYS H 145
G 2 3 O ALA B 142 ? O ALA H 138 N VAL B 190 ? N VAL H 193
G 3 4 O VAL B 187 ? O VAL H 190 N HIS B 170 ? N HIS H 172
H 1 2 O THR B 157 ? O THR H 153 N ASN B 205 ? N ASN H 211
H 2 3 O TYR B 200 ? O TYR H 206 N VAL B 217 ? N VAL H 223
#
_pdbx_entry_details.entry_id 1CLY
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details
;THE FAB LIGHT CHAIN (RESIDUES 1 - 214) HAS BEEN ASSIGNED
CHAIN INDICATOR L. THE FAB HEAVY CHAIN (RESIDUES 1 - 231)
HAS BEEN ASSIGNED CHAIN INDICATOR H. THE FAB FRAGMENT
IS NUMBERED BY THE CONVENTION OF E. KABAT (E.A. KABAT,
T.T. WU, H.M. PERRY, K.S. GOTTESMAN, C. FOELLER SEQUENCES
OF PROTEINS OF IMMUNOLOGICAL INTEREST, 5TH ED.,
(1991), NATIONAL INSTITUTES OF HEALTH, BETHESDA, MD.).
;
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 HIS L 27 D ? -86.90 -121.07
2 1 ASN L 27 E ? -86.44 40.63
3 1 ASN L 28 ? ? 58.46 6.76
4 1 ASN L 30 ? ? 73.27 165.54
5 1 VAL L 51 ? ? 67.40 -48.39
6 1 ASP L 60 ? ? -64.96 2.58
7 1 THR L 129 ? ? -47.97 106.82
8 1 ASN L 138 ? ? 19.64 82.60
9 1 PRO L 141 ? ? -65.32 -172.92
10 1 ASP L 151 ? ? 66.78 -71.97
11 1 ASN L 152 ? ? -159.68 9.30
12 1 ASN L 158 ? ? -75.42 43.47
13 1 ASP L 170 ? ? -153.32 8.11
14 1 LYS L 183 ? ? -25.95 -50.95
15 1 ALA H 88 ? ? -175.77 -176.43
16 1 PHE H 100 B ? -112.55 72.79
17 1 SER H 128 ? ? -162.12 -43.28
18 1 SER H 130 ? ? -175.60 -22.94
19 1 THR H 137 ? ? -175.00 138.41
20 1 ASP H 146 ? ? 43.36 98.02
21 1 PHE H 148 ? ? -173.31 139.61
22 1 ALA H 165 ? ? -95.66 41.68
23 1 LEU H 166 ? ? -172.72 82.01
24 1 THR H 167 ? ? -90.95 -72.35
25 1 GLN H 179 ? ? -58.74 -179.22
26 1 HIS H 212 ? ? -117.57 78.38
27 1 PRO H 214 ? ? -57.33 -7.03
#
_pdbx_molecule_features.prd_id PRD_900054
_pdbx_molecule_features.name 'Lewis Y antigen, beta anomer'
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Antigen
_pdbx_molecule_features.details 'oligosaccharide with branches'
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_900054
_pdbx_molecule.asym_id C
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 L ASP 1 ? A ASP 1
2 1 Y 1 L VAL 2 ? A VAL 2
3 1 Y 0 L GLY 212 ? A GLY 217
4 1 Y 0 L GLU 213 ? A GLU 218
5 1 Y 0 L CYS 214 ? A CYS 219
6 1 Y 0 H GLU 1 ? B GLU 1
7 1 Y 0 H ALA 125 ? B ALA 131
8 1 Y 0 H PRO 126 ? B PRO 132
9 1 Y 0 H SER 127 ? B SER 133
10 1 Y 0 H SER 128 ? B SER 134
11 1 Y 0 H LYS 129 ? B LYS 135
12 1 Y 0 H SER 130 ? B SER 136
13 1 Y 0 H THR 133 ? B THR 137
14 1 Y 0 H SER 134 ? B SER 138
15 1 Y 0 H GLY 135 ? B GLY 139
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
FUC C1 C N R 88
FUC C2 C N S 89
FUC C3 C N R 90
FUC C4 C N S 91
FUC C5 C N S 92
FUC C6 C N N 93
FUC O1 O N N 94
FUC O2 O N N 95
FUC O3 O N N 96
FUC O4 O N N 97
FUC O5 O N N 98
FUC H1 H N N 99
FUC H2 H N N 100
FUC H3 H N N 101
FUC H4 H N N 102
FUC H5 H N N 103
FUC H61 H N N 104
FUC H62 H N N 105
FUC H63 H N N 106
FUC HO1 H N N 107
FUC HO2 H N N 108
FUC HO3 H N N 109
FUC HO4 H N N 110
GAL C1 C N R 111
GAL C2 C N R 112
GAL C3 C N S 113
GAL C4 C N R 114
GAL C5 C N R 115
GAL C6 C N N 116
GAL O1 O N N 117
GAL O2 O N N 118
GAL O3 O N N 119
GAL O4 O N N 120
GAL O5 O N N 121
GAL O6 O N N 122
GAL H1 H N N 123
GAL H2 H N N 124
GAL H3 H N N 125
GAL H4 H N N 126
GAL H5 H N N 127
GAL H61 H N N 128
GAL H62 H N N 129
GAL HO1 H N N 130
GAL HO2 H N N 131
GAL HO3 H N N 132
GAL HO4 H N N 133
GAL HO6 H N N 134
GLN N N N N 135
GLN CA C N S 136
GLN C C N N 137
GLN O O N N 138
GLN CB C N N 139
GLN CG C N N 140
GLN CD C N N 141
GLN OE1 O N N 142
GLN NE2 N N N 143
GLN OXT O N N 144
GLN H H N N 145
GLN H2 H N N 146
GLN HA H N N 147
GLN HB2 H N N 148
GLN HB3 H N N 149
GLN HG2 H N N 150
GLN HG3 H N N 151
GLN HE21 H N N 152
GLN HE22 H N N 153
GLN HXT H N N 154
GLU N N N N 155
GLU CA C N S 156
GLU C C N N 157
GLU O O N N 158
GLU CB C N N 159
GLU CG C N N 160
GLU CD C N N 161
GLU OE1 O N N 162
GLU OE2 O N N 163
GLU OXT O N N 164
GLU H H N N 165
GLU H2 H N N 166
GLU HA H N N 167
GLU HB2 H N N 168
GLU HB3 H N N 169
GLU HG2 H N N 170
GLU HG3 H N N 171
GLU HE2 H N N 172
GLU HXT H N N 173
GLY N N N N 174
GLY CA C N N 175
GLY C C N N 176
GLY O O N N 177
GLY OXT O N N 178
GLY H H N N 179
GLY H2 H N N 180
GLY HA2 H N N 181
GLY HA3 H N N 182
GLY HXT H N N 183
HIS N N N N 184
HIS CA C N S 185
HIS C C N N 186
HIS O O N N 187
HIS CB C N N 188
HIS CG C Y N 189
HIS ND1 N Y N 190
HIS CD2 C Y N 191
HIS CE1 C Y N 192
HIS NE2 N Y N 193
HIS OXT O N N 194
HIS H H N N 195
HIS H2 H N N 196
HIS HA H N N 197
HIS HB2 H N N 198
HIS HB3 H N N 199
HIS HD1 H N N 200
HIS HD2 H N N 201
HIS HE1 H N N 202
HIS HE2 H N N 203
HIS HXT H N N 204
ILE N N N N 205
ILE CA C N S 206
ILE C C N N 207
ILE O O N N 208
ILE CB C N S 209
ILE CG1 C N N 210
ILE CG2 C N N 211
ILE CD1 C N N 212
ILE OXT O N N 213
ILE H H N N 214
ILE H2 H N N 215
ILE HA H N N 216
ILE HB H N N 217
ILE HG12 H N N 218
ILE HG13 H N N 219
ILE HG21 H N N 220
ILE HG22 H N N 221
ILE HG23 H N N 222
ILE HD11 H N N 223
ILE HD12 H N N 224
ILE HD13 H N N 225
ILE HXT H N N 226
LEU N N N N 227
LEU CA C N S 228
LEU C C N N 229
LEU O O N N 230
LEU CB C N N 231
LEU CG C N N 232
LEU CD1 C N N 233
LEU CD2 C N N 234
LEU OXT O N N 235
LEU H H N N 236
LEU H2 H N N 237
LEU HA H N N 238
LEU HB2 H N N 239
LEU HB3 H N N 240
LEU HG H N N 241
LEU HD11 H N N 242
LEU HD12 H N N 243
LEU HD13 H N N 244
LEU HD21 H N N 245
LEU HD22 H N N 246
LEU HD23 H N N 247
LEU HXT H N N 248
LYS N N N N 249
LYS CA C N S 250
LYS C C N N 251
LYS O O N N 252
LYS CB C N N 253
LYS CG C N N 254
LYS CD C N N 255
LYS CE C N N 256
LYS NZ N N N 257
LYS OXT O N N 258
LYS H H N N 259
LYS H2 H N N 260
LYS HA H N N 261
LYS HB2 H N N 262
LYS HB3 H N N 263
LYS HG2 H N N 264
LYS HG3 H N N 265
LYS HD2 H N N 266
LYS HD3 H N N 267
LYS HE2 H N N 268
LYS HE3 H N N 269
LYS HZ1 H N N 270
LYS HZ2 H N N 271
LYS HZ3 H N N 272
LYS HXT H N N 273
MET N N N N 274
MET CA C N S 275
MET C C N N 276
MET O O N N 277
MET CB C N N 278
MET CG C N N 279
MET SD S N N 280
MET CE C N N 281
MET OXT O N N 282
MET H H N N 283
MET H2 H N N 284
MET HA H N N 285
MET HB2 H N N 286
MET HB3 H N N 287
MET HG2 H N N 288
MET HG3 H N N 289
MET HE1 H N N 290
MET HE2 H N N 291
MET HE3 H N N 292
MET HXT H N N 293
NAG C1 C N R 294
NAG C2 C N R 295
NAG C3 C N R 296
NAG C4 C N S 297
NAG C5 C N R 298
NAG C6 C N N 299
NAG C7 C N N 300
NAG C8 C N N 301
NAG N2 N N N 302
NAG O1 O N N 303
NAG O3 O N N 304
NAG O4 O N N 305
NAG O5 O N N 306
NAG O6 O N N 307
NAG O7 O N N 308
NAG H1 H N N 309
NAG H2 H N N 310
NAG H3 H N N 311
NAG H4 H N N 312
NAG H5 H N N 313
NAG H61 H N N 314
NAG H62 H N N 315
NAG H81 H N N 316
NAG H82 H N N 317
NAG H83 H N N 318
NAG HN2 H N N 319
NAG HO1 H N N 320
NAG HO3 H N N 321
NAG HO4 H N N 322
NAG HO6 H N N 323
NON C1 C N N 324
NON C2 C N N 325
NON C3 C N N 326
NON C4 C N N 327
NON C5 C N N 328
NON C6 C N N 329
NON C7 C N N 330
NON C8 C N N 331
NON C9 C N N 332
NON O1 O N N 333
NON O2 O N N 334
NON CM C N N 335
NON H21 H N N 336
NON H22 H N N 337
NON H31 H N N 338
NON H32 H N N 339
NON H41 H N N 340
NON H42 H N N 341
NON H51 H N N 342
NON H52 H N N 343
NON H61 H N N 344
NON H62 H N N 345
NON H71 H N N 346
NON H72 H N N 347
NON H81 H N N 348
NON H82 H N N 349
NON H91 H N N 350
NON H92 H N N 351
NON H93 H N N 352
NON HM1 H N N 353
NON HM2 H N N 354
NON HM3 H N N 355
PHE N N N N 356
PHE CA C N S 357
PHE C C N N 358
PHE O O N N 359
PHE CB C N N 360
PHE CG C Y N 361
PHE CD1 C Y N 362
PHE CD2 C Y N 363
PHE CE1 C Y N 364
PHE CE2 C Y N 365
PHE CZ C Y N 366
PHE OXT O N N 367
PHE H H N N 368
PHE H2 H N N 369
PHE HA H N N 370
PHE HB2 H N N 371
PHE HB3 H N N 372
PHE HD1 H N N 373
PHE HD2 H N N 374
PHE HE1 H N N 375
PHE HE2 H N N 376
PHE HZ H N N 377
PHE HXT H N N 378
PRO N N N N 379
PRO CA C N S 380
PRO C C N N 381
PRO O O N N 382
PRO CB C N N 383
PRO CG C N N 384
PRO CD C N N 385
PRO OXT O N N 386
PRO H H N N 387
PRO HA H N N 388
PRO HB2 H N N 389
PRO HB3 H N N 390
PRO HG2 H N N 391
PRO HG3 H N N 392
PRO HD2 H N N 393
PRO HD3 H N N 394
PRO HXT H N N 395
SER N N N N 396
SER CA C N S 397
SER C C N N 398
SER O O N N 399
SER CB C N N 400
SER OG O N N 401
SER OXT O N N 402
SER H H N N 403
SER H2 H N N 404
SER HA H N N 405
SER HB2 H N N 406
SER HB3 H N N 407
SER HG H N N 408
SER HXT H N N 409
THR N N N N 410
THR CA C N S 411
THR C C N N 412
THR O O N N 413
THR CB C N R 414
THR OG1 O N N 415
THR CG2 C N N 416
THR OXT O N N 417
THR H H N N 418
THR H2 H N N 419
THR HA H N N 420
THR HB H N N 421
THR HG1 H N N 422
THR HG21 H N N 423
THR HG22 H N N 424
THR HG23 H N N 425
THR HXT H N N 426
TRP N N N N 427
TRP CA C N S 428
TRP C C N N 429
TRP O O N N 430
TRP CB C N N 431
TRP CG C Y N 432
TRP CD1 C Y N 433
TRP CD2 C Y N 434
TRP NE1 N Y N 435
TRP CE2 C Y N 436
TRP CE3 C Y N 437
TRP CZ2 C Y N 438
TRP CZ3 C Y N 439
TRP CH2 C Y N 440
TRP OXT O N N 441
TRP H H N N 442
TRP H2 H N N 443
TRP HA H N N 444
TRP HB2 H N N 445
TRP HB3 H N N 446
TRP HD1 H N N 447
TRP HE1 H N N 448
TRP HE3 H N N 449
TRP HZ2 H N N 450
TRP HZ3 H N N 451
TRP HH2 H N N 452
TRP HXT H N N 453
TYR N N N N 454
TYR CA C N S 455
TYR C C N N 456
TYR O O N N 457
TYR CB C N N 458
TYR CG C Y N 459
TYR CD1 C Y N 460
TYR CD2 C Y N 461
TYR CE1 C Y N 462
TYR CE2 C Y N 463
TYR CZ C Y N 464
TYR OH O N N 465
TYR OXT O N N 466
TYR H H N N 467
TYR H2 H N N 468
TYR HA H N N 469
TYR HB2 H N N 470
TYR HB3 H N N 471
TYR HD1 H N N 472
TYR HD2 H N N 473
TYR HE1 H N N 474
TYR HE2 H N N 475
TYR HH H N N 476
TYR HXT H N N 477
VAL N N N N 478
VAL CA C N S 479
VAL C C N N 480
VAL O O N N 481
VAL CB C N N 482
VAL CG1 C N N 483
VAL CG2 C N N 484
VAL OXT O N N 485
VAL H H N N 486
VAL H2 H N N 487
VAL HA H N N 488
VAL HB H N N 489
VAL HG11 H N N 490
VAL HG12 H N N 491
VAL HG13 H N N 492
VAL HG21 H N N 493
VAL HG22 H N N 494
VAL HG23 H N N 495
VAL HXT H N N 496
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
FUC C1 C2 sing N N 83
FUC C1 O1 sing N N 84
FUC C1 O5 sing N N 85
FUC C1 H1 sing N N 86
FUC C2 C3 sing N N 87
FUC C2 O2 sing N N 88
FUC C2 H2 sing N N 89
FUC C3 C4 sing N N 90
FUC C3 O3 sing N N 91
FUC C3 H3 sing N N 92
FUC C4 C5 sing N N 93
FUC C4 O4 sing N N 94
FUC C4 H4 sing N N 95
FUC C5 C6 sing N N 96
FUC C5 O5 sing N N 97
FUC C5 H5 sing N N 98
FUC C6 H61 sing N N 99
FUC C6 H62 sing N N 100
FUC C6 H63 sing N N 101
FUC O1 HO1 sing N N 102
FUC O2 HO2 sing N N 103
FUC O3 HO3 sing N N 104
FUC O4 HO4 sing N N 105
GAL C1 C2 sing N N 106
GAL C1 O1 sing N N 107
GAL C1 O5 sing N N 108
GAL C1 H1 sing N N 109
GAL C2 C3 sing N N 110
GAL C2 O2 sing N N 111
GAL C2 H2 sing N N 112
GAL C3 C4 sing N N 113
GAL C3 O3 sing N N 114
GAL C3 H3 sing N N 115
GAL C4 C5 sing N N 116
GAL C4 O4 sing N N 117
GAL C4 H4 sing N N 118
GAL C5 C6 sing N N 119
GAL C5 O5 sing N N 120
GAL C5 H5 sing N N 121
GAL C6 O6 sing N N 122
GAL C6 H61 sing N N 123
GAL C6 H62 sing N N 124
GAL O1 HO1 sing N N 125
GAL O2 HO2 sing N N 126
GAL O3 HO3 sing N N 127
GAL O4 HO4 sing N N 128
GAL O6 HO6 sing N N 129
GLN N CA sing N N 130
GLN N H sing N N 131
GLN N H2 sing N N 132
GLN CA C sing N N 133
GLN CA CB sing N N 134
GLN CA HA sing N N 135
GLN C O doub N N 136
GLN C OXT sing N N 137
GLN CB CG sing N N 138
GLN CB HB2 sing N N 139
GLN CB HB3 sing N N 140
GLN CG CD sing N N 141
GLN CG HG2 sing N N 142
GLN CG HG3 sing N N 143
GLN CD OE1 doub N N 144
GLN CD NE2 sing N N 145
GLN NE2 HE21 sing N N 146
GLN NE2 HE22 sing N N 147
GLN OXT HXT sing N N 148
GLU N CA sing N N 149
GLU N H sing N N 150
GLU N H2 sing N N 151
GLU CA C sing N N 152
GLU CA CB sing N N 153
GLU CA HA sing N N 154
GLU C O doub N N 155
GLU C OXT sing N N 156
GLU CB CG sing N N 157
GLU CB HB2 sing N N 158
GLU CB HB3 sing N N 159
GLU CG CD sing N N 160
GLU CG HG2 sing N N 161
GLU CG HG3 sing N N 162
GLU CD OE1 doub N N 163
GLU CD OE2 sing N N 164
GLU OE2 HE2 sing N N 165
GLU OXT HXT sing N N 166
GLY N CA sing N N 167
GLY N H sing N N 168
GLY N H2 sing N N 169
GLY CA C sing N N 170
GLY CA HA2 sing N N 171
GLY CA HA3 sing N N 172
GLY C O doub N N 173
GLY C OXT sing N N 174
GLY OXT HXT sing N N 175
HIS N CA sing N N 176
HIS N H sing N N 177
HIS N H2 sing N N 178
HIS CA C sing N N 179
HIS CA CB sing N N 180
HIS CA HA sing N N 181
HIS C O doub N N 182
HIS C OXT sing N N 183
HIS CB CG sing N N 184
HIS CB HB2 sing N N 185
HIS CB HB3 sing N N 186
HIS CG ND1 sing Y N 187
HIS CG CD2 doub Y N 188
HIS ND1 CE1 doub Y N 189
HIS ND1 HD1 sing N N 190
HIS CD2 NE2 sing Y N 191
HIS CD2 HD2 sing N N 192
HIS CE1 NE2 sing Y N 193
HIS CE1 HE1 sing N N 194
HIS NE2 HE2 sing N N 195
HIS OXT HXT sing N N 196
ILE N CA sing N N 197
ILE N H sing N N 198
ILE N H2 sing N N 199
ILE CA C sing N N 200
ILE CA CB sing N N 201
ILE CA HA sing N N 202
ILE C O doub N N 203
ILE C OXT sing N N 204
ILE CB CG1 sing N N 205
ILE CB CG2 sing N N 206
ILE CB HB sing N N 207
ILE CG1 CD1 sing N N 208
ILE CG1 HG12 sing N N 209
ILE CG1 HG13 sing N N 210
ILE CG2 HG21 sing N N 211
ILE CG2 HG22 sing N N 212
ILE CG2 HG23 sing N N 213
ILE CD1 HD11 sing N N 214
ILE CD1 HD12 sing N N 215
ILE CD1 HD13 sing N N 216
ILE OXT HXT sing N N 217
LEU N CA sing N N 218
LEU N H sing N N 219
LEU N H2 sing N N 220
LEU CA C sing N N 221
LEU CA CB sing N N 222
LEU CA HA sing N N 223
LEU C O doub N N 224
LEU C OXT sing N N 225
LEU CB CG sing N N 226
LEU CB HB2 sing N N 227
LEU CB HB3 sing N N 228
LEU CG CD1 sing N N 229
LEU CG CD2 sing N N 230
LEU CG HG sing N N 231
LEU CD1 HD11 sing N N 232
LEU CD1 HD12 sing N N 233
LEU CD1 HD13 sing N N 234
LEU CD2 HD21 sing N N 235
LEU CD2 HD22 sing N N 236
LEU CD2 HD23 sing N N 237
LEU OXT HXT sing N N 238
LYS N CA sing N N 239
LYS N H sing N N 240
LYS N H2 sing N N 241
LYS CA C sing N N 242
LYS CA CB sing N N 243
LYS CA HA sing N N 244
LYS C O doub N N 245
LYS C OXT sing N N 246
LYS CB CG sing N N 247
LYS CB HB2 sing N N 248
LYS CB HB3 sing N N 249
LYS CG CD sing N N 250
LYS CG HG2 sing N N 251
LYS CG HG3 sing N N 252
LYS CD CE sing N N 253
LYS CD HD2 sing N N 254
LYS CD HD3 sing N N 255
LYS CE NZ sing N N 256
LYS CE HE2 sing N N 257
LYS CE HE3 sing N N 258
LYS NZ HZ1 sing N N 259
LYS NZ HZ2 sing N N 260
LYS NZ HZ3 sing N N 261
LYS OXT HXT sing N N 262
MET N CA sing N N 263
MET N H sing N N 264
MET N H2 sing N N 265
MET CA C sing N N 266
MET CA CB sing N N 267
MET CA HA sing N N 268
MET C O doub N N 269
MET C OXT sing N N 270
MET CB CG sing N N 271
MET CB HB2 sing N N 272
MET CB HB3 sing N N 273
MET CG SD sing N N 274
MET CG HG2 sing N N 275
MET CG HG3 sing N N 276
MET SD CE sing N N 277
MET CE HE1 sing N N 278
MET CE HE2 sing N N 279
MET CE HE3 sing N N 280
MET OXT HXT sing N N 281
NAG C1 C2 sing N N 282
NAG C1 O1 sing N N 283
NAG C1 O5 sing N N 284
NAG C1 H1 sing N N 285
NAG C2 C3 sing N N 286
NAG C2 N2 sing N N 287
NAG C2 H2 sing N N 288
NAG C3 C4 sing N N 289
NAG C3 O3 sing N N 290
NAG C3 H3 sing N N 291
NAG C4 C5 sing N N 292
NAG C4 O4 sing N N 293
NAG C4 H4 sing N N 294
NAG C5 C6 sing N N 295
NAG C5 O5 sing N N 296
NAG C5 H5 sing N N 297
NAG C6 O6 sing N N 298
NAG C6 H61 sing N N 299
NAG C6 H62 sing N N 300
NAG C7 C8 sing N N 301
NAG C7 N2 sing N N 302
NAG C7 O7 doub N N 303
NAG C8 H81 sing N N 304
NAG C8 H82 sing N N 305
NAG C8 H83 sing N N 306
NAG N2 HN2 sing N N 307
NAG O1 HO1 sing N N 308
NAG O3 HO3 sing N N 309
NAG O4 HO4 sing N N 310
NAG O6 HO6 sing N N 311
NON C1 C2 sing N N 312
NON C1 O1 doub N N 313
NON C1 O2 sing N N 314
NON C2 C3 sing N N 315
NON C2 H21 sing N N 316
NON C2 H22 sing N N 317
NON C3 C4 sing N N 318
NON C3 H31 sing N N 319
NON C3 H32 sing N N 320
NON C4 C5 sing N N 321
NON C4 H41 sing N N 322
NON C4 H42 sing N N 323
NON C5 C6 sing N N 324
NON C5 H51 sing N N 325
NON C5 H52 sing N N 326
NON C6 C7 sing N N 327
NON C6 H61 sing N N 328
NON C6 H62 sing N N 329
NON C7 C8 sing N N 330
NON C7 H71 sing N N 331
NON C7 H72 sing N N 332
NON C8 C9 sing N N 333
NON C8 H81 sing N N 334
NON C8 H82 sing N N 335
NON C9 H91 sing N N 336
NON C9 H92 sing N N 337
NON C9 H93 sing N N 338
NON O2 CM sing N N 339
NON CM HM1 sing N N 340
NON CM HM2 sing N N 341
NON CM HM3 sing N N 342
PHE N CA sing N N 343
PHE N H sing N N 344
PHE N H2 sing N N 345
PHE CA C sing N N 346
PHE CA CB sing N N 347
PHE CA HA sing N N 348
PHE C O doub N N 349
PHE C OXT sing N N 350
PHE CB CG sing N N 351
PHE CB HB2 sing N N 352
PHE CB HB3 sing N N 353
PHE CG CD1 doub Y N 354
PHE CG CD2 sing Y N 355
PHE CD1 CE1 sing Y N 356
PHE CD1 HD1 sing N N 357
PHE CD2 CE2 doub Y N 358
PHE CD2 HD2 sing N N 359
PHE CE1 CZ doub Y N 360
PHE CE1 HE1 sing N N 361
PHE CE2 CZ sing Y N 362
PHE CE2 HE2 sing N N 363
PHE CZ HZ sing N N 364
PHE OXT HXT sing N N 365
PRO N CA sing N N 366
PRO N CD sing N N 367
PRO N H sing N N 368
PRO CA C sing N N 369
PRO CA CB sing N N 370
PRO CA HA sing N N 371
PRO C O doub N N 372
PRO C OXT sing N N 373
PRO CB CG sing N N 374
PRO CB HB2 sing N N 375
PRO CB HB3 sing N N 376
PRO CG CD sing N N 377
PRO CG HG2 sing N N 378
PRO CG HG3 sing N N 379
PRO CD HD2 sing N N 380
PRO CD HD3 sing N N 381
PRO OXT HXT sing N N 382
SER N CA sing N N 383
SER N H sing N N 384
SER N H2 sing N N 385
SER CA C sing N N 386
SER CA CB sing N N 387
SER CA HA sing N N 388
SER C O doub N N 389
SER C OXT sing N N 390
SER CB OG sing N N 391
SER CB HB2 sing N N 392
SER CB HB3 sing N N 393
SER OG HG sing N N 394
SER OXT HXT sing N N 395
THR N CA sing N N 396
THR N H sing N N 397
THR N H2 sing N N 398
THR CA C sing N N 399
THR CA CB sing N N 400
THR CA HA sing N N 401
THR C O doub N N 402
THR C OXT sing N N 403
THR CB OG1 sing N N 404
THR CB CG2 sing N N 405
THR CB HB sing N N 406
THR OG1 HG1 sing N N 407
THR CG2 HG21 sing N N 408
THR CG2 HG22 sing N N 409
THR CG2 HG23 sing N N 410
THR OXT HXT sing N N 411
TRP N CA sing N N 412
TRP N H sing N N 413
TRP N H2 sing N N 414
TRP CA C sing N N 415
TRP CA CB sing N N 416
TRP CA HA sing N N 417
TRP C O doub N N 418
TRP C OXT sing N N 419
TRP CB CG sing N N 420
TRP CB HB2 sing N N 421
TRP CB HB3 sing N N 422
TRP CG CD1 doub Y N 423
TRP CG CD2 sing Y N 424
TRP CD1 NE1 sing Y N 425
TRP CD1 HD1 sing N N 426
TRP CD2 CE2 doub Y N 427
TRP CD2 CE3 sing Y N 428
TRP NE1 CE2 sing Y N 429
TRP NE1 HE1 sing N N 430
TRP CE2 CZ2 sing Y N 431
TRP CE3 CZ3 doub Y N 432
TRP CE3 HE3 sing N N 433
TRP CZ2 CH2 doub Y N 434
TRP CZ2 HZ2 sing N N 435
TRP CZ3 CH2 sing Y N 436
TRP CZ3 HZ3 sing N N 437
TRP CH2 HH2 sing N N 438
TRP OXT HXT sing N N 439
TYR N CA sing N N 440
TYR N H sing N N 441
TYR N H2 sing N N 442
TYR CA C sing N N 443
TYR CA CB sing N N 444
TYR CA HA sing N N 445
TYR C O doub N N 446
TYR C OXT sing N N 447
TYR CB CG sing N N 448
TYR CB HB2 sing N N 449
TYR CB HB3 sing N N 450
TYR CG CD1 doub Y N 451
TYR CG CD2 sing Y N 452
TYR CD1 CE1 sing Y N 453
TYR CD1 HD1 sing N N 454
TYR CD2 CE2 doub Y N 455
TYR CD2 HD2 sing N N 456
TYR CE1 CZ doub Y N 457
TYR CE1 HE1 sing N N 458
TYR CE2 CZ sing Y N 459
TYR CE2 HE2 sing N N 460
TYR CZ OH sing N N 461
TYR OH HH sing N N 462
TYR OXT HXT sing N N 463
VAL N CA sing N N 464
VAL N H sing N N 465
VAL N H2 sing N N 466
VAL CA C sing N N 467
VAL CA CB sing N N 468
VAL CA HA sing N N 469
VAL C O doub N N 470
VAL C OXT sing N N 471
VAL CB CG1 sing N N 472
VAL CB CG2 sing N N 473
VAL CB HB sing N N 474
VAL CG1 HG11 sing N N 475
VAL CG1 HG12 sing N N 476
VAL CG1 HG13 sing N N 477
VAL CG2 HG21 sing N N 478
VAL CG2 HG22 sing N N 479
VAL CG2 HG23 sing N N 480
VAL OXT HXT sing N N 481
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
3 NAG 1 n
3 GAL 2 n
3 FUC 3 n
3 FUC 4 n
#
_atom_sites.entry_id 1CLY
_atom_sites.fract_transf_matrix[1][1] 0.012240
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.012240
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.006013
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_