data_1CMA # _entry.id 1CMA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1CMA pdb_00001cma 10.2210/pdb1cma/pdb RCSB PDR008 ? ? WWPDB D_1000172388 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' struct_conf 2 4 'Structure model' struct_conf_type 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CMA _pdbx_database_status.recvd_initial_deposition_date 1992-08-24 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Somers, W.S.' 1 'Phillips, S.E.V.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of the met repressor-operator complex at 2.8 A resolution reveals DNA recognition by beta-strands.' Nature 359 387 393 1992 NATUAS UK 0028-0836 0006 ? 1406951 10.1038/359387a0 1 'Three-Dimensional Crystal Structures of Escherichia Coli met Repressor with and without Corepressor' Nature 341 705 710 1989 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Somers, W.S.' 1 ? primary 'Phillips, S.E.' 2 ? 1 'Rafferty, J.B.' 3 ? 1 'Somers, W.S.' 4 ? 1 'Saint-Girons, I.' 5 ? 1 'Phillips, S.E.V.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*TP*AP*GP*AP*CP*GP*TP*CP*T)-3') ; 3035.003 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*AP*CP*GP*TP*CP*TP*A)-3') ; 2739.823 1 ? ? ? ? 3 polymer nat 'PROTEIN (MET REPRESSOR)' 12027.557 2 ? ? ? ? 4 non-polymer syn S-ADENOSYLMETHIONINE 398.437 2 ? ? ? ? 5 water nat water 18.015 36 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DT)(DA)(DG)(DA)(DC)(DG)(DT)(DC)(DT)' TTAGACGTCT C ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DA)(DC)(DG)(DT)(DC)(DT)(DA)' AGACGTCTA D ? 3 'polypeptide(L)' no no ;AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKER SDEIPEAAKEIMREMGINPETWEY ; ;AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKER SDEIPEAAKEIMREMGINPETWEY ; A,B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 S-ADENOSYLMETHIONINE SAM 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DA n 1 4 DG n 1 5 DA n 1 6 DC n 1 7 DG n 1 8 DT n 1 9 DC n 1 10 DT n 2 1 DA n 2 2 DG n 2 3 DA n 2 4 DC n 2 5 DG n 2 6 DT n 2 7 DC n 2 8 DT n 2 9 DA n 3 1 ALA n 3 2 GLU n 3 3 TRP n 3 4 SER n 3 5 GLY n 3 6 GLU n 3 7 TYR n 3 8 ILE n 3 9 SER n 3 10 PRO n 3 11 TYR n 3 12 ALA n 3 13 GLU n 3 14 HIS n 3 15 GLY n 3 16 LYS n 3 17 LYS n 3 18 SER n 3 19 GLU n 3 20 GLN n 3 21 VAL n 3 22 LYS n 3 23 LYS n 3 24 ILE n 3 25 THR n 3 26 VAL n 3 27 SER n 3 28 ILE n 3 29 PRO n 3 30 LEU n 3 31 LYS n 3 32 VAL n 3 33 LEU n 3 34 LYS n 3 35 ILE n 3 36 LEU n 3 37 THR n 3 38 ASP n 3 39 GLU n 3 40 ARG n 3 41 THR n 3 42 ARG n 3 43 ARG n 3 44 GLN n 3 45 VAL n 3 46 ASN n 3 47 ASN n 3 48 LEU n 3 49 ARG n 3 50 HIS n 3 51 ALA n 3 52 THR n 3 53 ASN n 3 54 SER n 3 55 GLU n 3 56 LEU n 3 57 LEU n 3 58 CYS n 3 59 GLU n 3 60 ALA n 3 61 PHE n 3 62 LEU n 3 63 HIS n 3 64 ALA n 3 65 PHE n 3 66 THR n 3 67 GLY n 3 68 GLN n 3 69 PRO n 3 70 LEU n 3 71 PRO n 3 72 ASP n 3 73 ASP n 3 74 ALA n 3 75 ASP n 3 76 LEU n 3 77 ARG n 3 78 LYS n 3 79 GLU n 3 80 ARG n 3 81 SER n 3 82 ASP n 3 83 GLU n 3 84 ILE n 3 85 PRO n 3 86 GLU n 3 87 ALA n 3 88 ALA n 3 89 LYS n 3 90 GLU n 3 91 ILE n 3 92 MET n 3 93 ARG n 3 94 GLU n 3 95 MET n 3 96 GLY n 3 97 ILE n 3 98 ASN n 3 99 PRO n 3 100 GLU n 3 101 THR n 3 102 TRP n 3 103 GLU n 3 104 TYR n # _entity_src_nat.entity_id 3 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus Escherichia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAM non-polymer . S-ADENOSYLMETHIONINE ? 'C15 H22 N6 O5 S' 398.437 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T C . n A 1 2 DT 2 2 2 DT T C . n A 1 3 DA 3 3 3 DA A C . n A 1 4 DG 4 4 4 DG G C . n A 1 5 DA 5 5 5 DA A C . n A 1 6 DC 6 6 6 DC C C . n A 1 7 DG 7 7 7 DG G C . n A 1 8 DT 8 8 8 DT T C . n A 1 9 DC 9 9 9 DC C C . n A 1 10 DT 10 10 10 DT T C . n B 2 1 DA 1 11 11 DA A D . n B 2 2 DG 2 12 12 DG G D . n B 2 3 DA 3 13 13 DA A D . n B 2 4 DC 4 14 14 DC C D . n B 2 5 DG 5 15 15 DG G D . n B 2 6 DT 6 16 16 DT T D . n B 2 7 DC 7 17 17 DC C D . n B 2 8 DT 8 18 18 DT T D . n B 2 9 DA 9 19 19 DA A D . n C 3 1 ALA 1 1 1 ALA ALA A . n C 3 2 GLU 2 2 2 GLU GLU A . n C 3 3 TRP 3 3 3 TRP TRP A . n C 3 4 SER 4 4 4 SER SER A . n C 3 5 GLY 5 5 5 GLY GLY A . n C 3 6 GLU 6 6 6 GLU GLU A . n C 3 7 TYR 7 7 7 TYR TYR A . n C 3 8 ILE 8 8 8 ILE ILE A . n C 3 9 SER 9 9 9 SER SER A . n C 3 10 PRO 10 10 10 PRO PRO A . n C 3 11 TYR 11 11 11 TYR TYR A . n C 3 12 ALA 12 12 12 ALA ALA A . n C 3 13 GLU 13 13 13 GLU GLU A . n C 3 14 HIS 14 14 14 HIS HIS A . n C 3 15 GLY 15 15 15 GLY GLY A . n C 3 16 LYS 16 16 16 LYS LYS A . n C 3 17 LYS 17 17 17 LYS LYS A . n C 3 18 SER 18 18 18 SER SER A . n C 3 19 GLU 19 19 19 GLU GLU A . n C 3 20 GLN 20 20 20 GLN GLN A . n C 3 21 VAL 21 21 21 VAL VAL A . n C 3 22 LYS 22 22 22 LYS LYS A . n C 3 23 LYS 23 23 23 LYS LYS A . n C 3 24 ILE 24 24 24 ILE ILE A . n C 3 25 THR 25 25 25 THR THR A . n C 3 26 VAL 26 26 26 VAL VAL A . n C 3 27 SER 27 27 27 SER SER A . n C 3 28 ILE 28 28 28 ILE ILE A . n C 3 29 PRO 29 29 29 PRO PRO A . n C 3 30 LEU 30 30 30 LEU LEU A . n C 3 31 LYS 31 31 31 LYS LYS A . n C 3 32 VAL 32 32 32 VAL VAL A . n C 3 33 LEU 33 33 33 LEU LEU A . n C 3 34 LYS 34 34 34 LYS LYS A . n C 3 35 ILE 35 35 35 ILE ILE A . n C 3 36 LEU 36 36 36 LEU LEU A . n C 3 37 THR 37 37 37 THR THR A . n C 3 38 ASP 38 38 38 ASP ASP A . n C 3 39 GLU 39 39 39 GLU GLU A . n C 3 40 ARG 40 40 40 ARG ARG A . n C 3 41 THR 41 41 41 THR THR A . n C 3 42 ARG 42 42 42 ARG ARG A . n C 3 43 ARG 43 43 43 ARG ARG A . n C 3 44 GLN 44 44 44 GLN GLN A . n C 3 45 VAL 45 45 45 VAL VAL A . n C 3 46 ASN 46 46 46 ASN ASN A . n C 3 47 ASN 47 47 47 ASN ASN A . n C 3 48 LEU 48 48 48 LEU LEU A . n C 3 49 ARG 49 49 49 ARG ARG A . n C 3 50 HIS 50 50 50 HIS HIS A . n C 3 51 ALA 51 51 51 ALA ALA A . n C 3 52 THR 52 52 52 THR THR A . n C 3 53 ASN 53 53 53 ASN ASN A . n C 3 54 SER 54 54 54 SER SER A . n C 3 55 GLU 55 55 55 GLU GLU A . n C 3 56 LEU 56 56 56 LEU LEU A . n C 3 57 LEU 57 57 57 LEU LEU A . n C 3 58 CYS 58 58 58 CYS CYS A . n C 3 59 GLU 59 59 59 GLU GLU A . n C 3 60 ALA 60 60 60 ALA ALA A . n C 3 61 PHE 61 61 61 PHE PHE A . n C 3 62 LEU 62 62 62 LEU LEU A . n C 3 63 HIS 63 63 63 HIS HIS A . n C 3 64 ALA 64 64 64 ALA ALA A . n C 3 65 PHE 65 65 65 PHE PHE A . n C 3 66 THR 66 66 66 THR THR A . n C 3 67 GLY 67 67 67 GLY GLY A . n C 3 68 GLN 68 68 68 GLN GLN A . n C 3 69 PRO 69 69 69 PRO PRO A . n C 3 70 LEU 70 70 70 LEU LEU A . n C 3 71 PRO 71 71 71 PRO PRO A . n C 3 72 ASP 72 72 72 ASP ASP A . n C 3 73 ASP 73 73 73 ASP ASP A . n C 3 74 ALA 74 74 74 ALA ALA A . n C 3 75 ASP 75 75 75 ASP ASP A . n C 3 76 LEU 76 76 76 LEU LEU A . n C 3 77 ARG 77 77 77 ARG ARG A . n C 3 78 LYS 78 78 78 LYS LYS A . n C 3 79 GLU 79 79 79 GLU GLU A . n C 3 80 ARG 80 80 80 ARG ARG A . n C 3 81 SER 81 81 81 SER SER A . n C 3 82 ASP 82 82 82 ASP ASP A . n C 3 83 GLU 83 83 83 GLU GLU A . n C 3 84 ILE 84 84 84 ILE ILE A . n C 3 85 PRO 85 85 85 PRO PRO A . n C 3 86 GLU 86 86 86 GLU GLU A . n C 3 87 ALA 87 87 87 ALA ALA A . n C 3 88 ALA 88 88 88 ALA ALA A . n C 3 89 LYS 89 89 89 LYS LYS A . n C 3 90 GLU 90 90 90 GLU GLU A . n C 3 91 ILE 91 91 91 ILE ILE A . n C 3 92 MET 92 92 92 MET MET A . n C 3 93 ARG 93 93 93 ARG ARG A . n C 3 94 GLU 94 94 94 GLU GLU A . n C 3 95 MET 95 95 95 MET MET A . n C 3 96 GLY 96 96 96 GLY GLY A . n C 3 97 ILE 97 97 97 ILE ILE A . n C 3 98 ASN 98 98 98 ASN ASN A . n C 3 99 PRO 99 99 99 PRO PRO A . n C 3 100 GLU 100 100 100 GLU GLU A . n C 3 101 THR 101 101 101 THR THR A . n C 3 102 TRP 102 102 102 TRP TRP A . n C 3 103 GLU 103 103 103 GLU GLU A . n C 3 104 TYR 104 104 104 TYR TYR A . n D 3 1 ALA 1 1 1 ALA ALA B . n D 3 2 GLU 2 2 2 GLU GLU B . n D 3 3 TRP 3 3 3 TRP TRP B . n D 3 4 SER 4 4 4 SER SER B . n D 3 5 GLY 5 5 5 GLY GLY B . n D 3 6 GLU 6 6 6 GLU GLU B . n D 3 7 TYR 7 7 7 TYR TYR B . n D 3 8 ILE 8 8 8 ILE ILE B . n D 3 9 SER 9 9 9 SER SER B . n D 3 10 PRO 10 10 10 PRO PRO B . n D 3 11 TYR 11 11 11 TYR TYR B . n D 3 12 ALA 12 12 12 ALA ALA B . n D 3 13 GLU 13 13 13 GLU GLU B . n D 3 14 HIS 14 14 14 HIS HIS B . n D 3 15 GLY 15 15 15 GLY GLY B . n D 3 16 LYS 16 16 16 LYS LYS B . n D 3 17 LYS 17 17 17 LYS LYS B . n D 3 18 SER 18 18 18 SER SER B . n D 3 19 GLU 19 19 19 GLU GLU B . n D 3 20 GLN 20 20 20 GLN GLN B . n D 3 21 VAL 21 21 21 VAL VAL B . n D 3 22 LYS 22 22 22 LYS LYS B . n D 3 23 LYS 23 23 23 LYS LYS B . n D 3 24 ILE 24 24 24 ILE ILE B . n D 3 25 THR 25 25 25 THR THR B . n D 3 26 VAL 26 26 26 VAL VAL B . n D 3 27 SER 27 27 27 SER SER B . n D 3 28 ILE 28 28 28 ILE ILE B . n D 3 29 PRO 29 29 29 PRO PRO B . n D 3 30 LEU 30 30 30 LEU LEU B . n D 3 31 LYS 31 31 31 LYS LYS B . n D 3 32 VAL 32 32 32 VAL VAL B . n D 3 33 LEU 33 33 33 LEU LEU B . n D 3 34 LYS 34 34 34 LYS LYS B . n D 3 35 ILE 35 35 35 ILE ILE B . n D 3 36 LEU 36 36 36 LEU LEU B . n D 3 37 THR 37 37 37 THR THR B . n D 3 38 ASP 38 38 38 ASP ASP B . n D 3 39 GLU 39 39 39 GLU GLU B . n D 3 40 ARG 40 40 40 ARG ARG B . n D 3 41 THR 41 41 41 THR THR B . n D 3 42 ARG 42 42 42 ARG ARG B . n D 3 43 ARG 43 43 43 ARG ARG B . n D 3 44 GLN 44 44 44 GLN GLN B . n D 3 45 VAL 45 45 45 VAL VAL B . n D 3 46 ASN 46 46 46 ASN ASN B . n D 3 47 ASN 47 47 47 ASN ASN B . n D 3 48 LEU 48 48 48 LEU LEU B . n D 3 49 ARG 49 49 49 ARG ARG B . n D 3 50 HIS 50 50 50 HIS HIS B . n D 3 51 ALA 51 51 51 ALA ALA B . n D 3 52 THR 52 52 52 THR THR B . n D 3 53 ASN 53 53 53 ASN ASN B . n D 3 54 SER 54 54 54 SER SER B . n D 3 55 GLU 55 55 55 GLU GLU B . n D 3 56 LEU 56 56 56 LEU LEU B . n D 3 57 LEU 57 57 57 LEU LEU B . n D 3 58 CYS 58 58 58 CYS CYS B . n D 3 59 GLU 59 59 59 GLU GLU B . n D 3 60 ALA 60 60 60 ALA ALA B . n D 3 61 PHE 61 61 61 PHE PHE B . n D 3 62 LEU 62 62 62 LEU LEU B . n D 3 63 HIS 63 63 63 HIS HIS B . n D 3 64 ALA 64 64 64 ALA ALA B . n D 3 65 PHE 65 65 65 PHE PHE B . n D 3 66 THR 66 66 66 THR THR B . n D 3 67 GLY 67 67 67 GLY GLY B . n D 3 68 GLN 68 68 68 GLN GLN B . n D 3 69 PRO 69 69 69 PRO PRO B . n D 3 70 LEU 70 70 70 LEU LEU B . n D 3 71 PRO 71 71 71 PRO PRO B . n D 3 72 ASP 72 72 72 ASP ASP B . n D 3 73 ASP 73 73 73 ASP ASP B . n D 3 74 ALA 74 74 74 ALA ALA B . n D 3 75 ASP 75 75 75 ASP ASP B . n D 3 76 LEU 76 76 76 LEU LEU B . n D 3 77 ARG 77 77 77 ARG ARG B . n D 3 78 LYS 78 78 78 LYS LYS B . n D 3 79 GLU 79 79 79 GLU GLU B . n D 3 80 ARG 80 80 80 ARG ARG B . n D 3 81 SER 81 81 81 SER SER B . n D 3 82 ASP 82 82 82 ASP ASP B . n D 3 83 GLU 83 83 83 GLU GLU B . n D 3 84 ILE 84 84 84 ILE ILE B . n D 3 85 PRO 85 85 85 PRO PRO B . n D 3 86 GLU 86 86 86 GLU GLU B . n D 3 87 ALA 87 87 87 ALA ALA B . n D 3 88 ALA 88 88 88 ALA ALA B . n D 3 89 LYS 89 89 89 LYS LYS B . n D 3 90 GLU 90 90 90 GLU GLU B . n D 3 91 ILE 91 91 91 ILE ILE B . n D 3 92 MET 92 92 92 MET MET B . n D 3 93 ARG 93 93 93 ARG ARG B . n D 3 94 GLU 94 94 94 GLU GLU B . n D 3 95 MET 95 95 95 MET MET B . n D 3 96 GLY 96 96 96 GLY GLY B . n D 3 97 ILE 97 97 97 ILE ILE B . n D 3 98 ASN 98 98 98 ASN ASN B . n D 3 99 PRO 99 99 99 PRO PRO B . n D 3 100 GLU 100 100 100 GLU GLU B . n D 3 101 THR 101 101 101 THR THR B . n D 3 102 TRP 102 102 102 TRP TRP B . n D 3 103 GLU 103 103 103 GLU GLU B . n D 3 104 TYR 104 104 104 TYR TYR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 SAM 1 105 105 SAM SAM A . F 4 SAM 1 105 105 SAM SAM B . G 5 HOH 1 11 4 HOH HOH C . G 5 HOH 2 12 5 HOH HOH C . G 5 HOH 3 13 12 HOH HOH C . G 5 HOH 4 14 13 HOH HOH C . G 5 HOH 5 15 14 HOH HOH C . G 5 HOH 6 16 15 HOH HOH C . G 5 HOH 7 17 16 HOH HOH C . G 5 HOH 8 18 32 HOH HOH C . H 5 HOH 1 6 6 HOH HOH D . H 5 HOH 2 9 9 HOH HOH D . H 5 HOH 3 30 30 HOH HOH D . H 5 HOH 4 33 33 HOH HOH D . H 5 HOH 5 34 34 HOH HOH D . I 5 HOH 1 106 1 HOH HOH A . I 5 HOH 2 107 2 HOH HOH A . I 5 HOH 3 108 8 HOH HOH A . I 5 HOH 4 109 10 HOH HOH A . I 5 HOH 5 110 11 HOH HOH A . I 5 HOH 6 111 17 HOH HOH A . I 5 HOH 7 112 19 HOH HOH A . I 5 HOH 8 113 20 HOH HOH A . I 5 HOH 9 114 21 HOH HOH A . I 5 HOH 10 115 22 HOH HOH A . I 5 HOH 11 116 23 HOH HOH A . I 5 HOH 12 117 27 HOH HOH A . I 5 HOH 13 118 35 HOH HOH A . I 5 HOH 14 119 36 HOH HOH A . J 5 HOH 1 106 3 HOH HOH B . J 5 HOH 2 107 7 HOH HOH B . J 5 HOH 3 108 18 HOH HOH B . J 5 HOH 4 109 24 HOH HOH B . J 5 HOH 5 110 25 HOH HOH B . J 5 HOH 6 111 26 HOH HOH B . J 5 HOH 7 112 28 HOH HOH B . J 5 HOH 8 113 29 HOH HOH B . J 5 HOH 9 114 31 HOH HOH B . # _software.name TNT _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1CMA _cell.length_a 121.350 _cell.length_b 121.350 _cell.length_c 84.810 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CMA _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 # _exptl.entry_id 1CMA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_percent_sol 58.99 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'NA CACODYLATE' ? ? ? 1 4 1 'NA AZIDE' ? ? ? 1 5 1 CACL2 ? ? ? 1 6 1 NACL ? ? ? 1 7 1 SAM ? ? ? 1 8 2 WATER ? ? ? 1 9 2 MPD ? ? ? 1 10 2 'NA CACODYLATE' ? ? ? 1 11 2 'NA AZIDE' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details 'ROOM TEMPERATURE' _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'OSCILLATION CAMERA' _diffrn_detector.type ARNDT-WONACOTT _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX9.6' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX9.6 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1CMA _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.600 _reflns.number_obs 8856 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1CMA _refine.ls_number_reflns_obs 8856 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2200000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1690 _refine_hist.pdbx_number_atoms_nucleic_acid 386 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 2166 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ? t_angle_deg 1.680 ? ? ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes 0.007 ? ? ? 'X-RAY DIFFRACTION' ? t_it 6.600 ? ? ? 'X-RAY DIFFRACTION' ? t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1CMA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1CMA _struct.title 'MET REPRESSOR/DNA COMPLEX + S-ADENOSYL-METHIONINE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CMA _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? # loop_ _struct_ref.id _struct_ref.db_code _struct_ref.db_name _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 METJ_ECOLI UNP 3 P0A8U6 ? ? ? 2 1CMA PDB 1 1CMA ? ? ? 3 1CMA PDB 2 1CMA ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1CMA A 1 ? 104 ? P0A8U6 1 ? 104 ? 1 104 2 1 1CMA B 1 ? 104 ? P0A8U6 1 ? 104 ? 1 104 3 2 1CMA C 1 ? 10 ? 1CMA 1 ? 10 ? 1 10 4 3 1CMA D 1 ? 9 ? 1CMA 11 ? 19 ? 11 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 60.6750000000 0.0000000000 -1.0000000000 0.0000000000 105.0921827492 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA LEU C 30 ? VAL C 45 ? LEU A 30 VAL A 45 1 ? 16 HELX_P HELX_P2 BA ASN C 53 ? THR C 66 ? ASN A 53 THR A 66 1 ? 14 HELX_P HELX_P3 CA GLU C 86 ? GLU C 94 ? GLU A 86 GLU A 94 1 ? 9 HELX_P HELX_P4 AB LEU D 30 ? VAL D 45 ? LEU B 30 VAL B 45 1 ? 16 HELX_P HELX_P5 BB ASN D 53 ? THR D 66 ? ASN B 53 THR B 66 1 ? 14 HELX_P HELX_P6 CB GLU D 86 ? GLU D 94 ? GLU B 86 GLU B 94 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 2 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 2 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 3 D DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 3 D DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? C DG 4 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 6 N3 ? ? C DA 5 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 6 O4 ? ? C DA 5 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 5 N1 ? ? C DC 6 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 5 O6 ? ? C DC 6 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 5 N2 ? ? C DC 6 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 7 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 7 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 7 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 8 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 8 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? C DC 9 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 9 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? C DC 9 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 1 N1 ? ? C DT 10 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 1 N6 ? ? C DT 10 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id S1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id S1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id S1 1 LYS C 22 ? ILE C 28 ? LYS A 22 ILE A 28 S1 2 LYS D 22 ? ILE D 28 ? LYS B 22 ILE B 28 # _pdbx_struct_sheet_hbond.sheet_id S1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LYS _pdbx_struct_sheet_hbond.range_1_label_asym_id C _pdbx_struct_sheet_hbond.range_1_label_seq_id 22 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 22 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id D _pdbx_struct_sheet_hbond.range_2_label_seq_id 28 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 28 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAM 105 ? 10 'BINDING SITE FOR RESIDUE SAM A 105' AC2 Software B SAM 105 ? 12 'BINDING SITE FOR RESIDUE SAM B 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 ALA C 64 ? ALA A 64 . ? 1_555 ? 2 AC1 10 PHE C 65 ? PHE A 65 . ? 1_555 ? 3 AC1 10 GLU D 39 ? GLU B 39 . ? 1_555 ? 4 AC1 10 ARG D 42 ? ARG B 42 . ? 1_555 ? 5 AC1 10 ARG D 43 ? ARG B 43 . ? 1_555 ? 6 AC1 10 LEU D 56 ? LEU B 56 . ? 1_555 ? 7 AC1 10 GLU D 59 ? GLU B 59 . ? 1_555 ? 8 AC1 10 HIS D 63 ? HIS B 63 . ? 1_555 ? 9 AC1 10 PRO D 71 ? PRO B 71 . ? 1_555 ? 10 AC1 10 ARG D 77 ? ARG B 77 . ? 7_554 ? 11 AC2 12 GLU C 39 ? GLU A 39 . ? 1_555 ? 12 AC2 12 ARG C 42 ? ARG A 42 . ? 1_555 ? 13 AC2 12 ARG C 43 ? ARG A 43 . ? 1_555 ? 14 AC2 12 LEU C 56 ? LEU A 56 . ? 1_555 ? 15 AC2 12 GLU C 59 ? GLU A 59 . ? 1_555 ? 16 AC2 12 HIS C 63 ? HIS A 63 . ? 1_555 ? 17 AC2 12 PRO C 71 ? PRO A 71 . ? 1_555 ? 18 AC2 12 HOH I . ? HOH A 107 . ? 1_555 ? 19 AC2 12 PHE D 61 ? PHE B 61 . ? 1_555 ? 20 AC2 12 HIS D 63 ? HIS B 63 . ? 1_555 ? 21 AC2 12 ALA D 64 ? ALA B 64 . ? 1_555 ? 22 AC2 12 PHE D 65 ? PHE B 65 . ? 1_555 ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 111 ? ? 1_555 O A HOH 111 ? ? 12_565 0.56 2 1 "O3'" C DT 10 ? ? 1_555 P D DA 11 ? ? 12_565 1.48 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DT 2 ? ? "C3'" C DT 2 ? ? 1.369 1.419 -0.050 0.006 N 2 1 "O3'" C DA 3 ? ? "C3'" C DA 3 ? ? 1.362 1.419 -0.057 0.006 N 3 1 "O3'" C DA 5 ? ? "C3'" C DA 5 ? ? 1.361 1.419 -0.058 0.006 N 4 1 "O3'" D DA 11 ? ? "C3'" D DA 11 ? ? 1.321 1.419 -0.098 0.006 N 5 1 N9 D DA 11 ? ? C4 D DA 11 ? ? 1.426 1.374 0.052 0.006 N 6 1 "C5'" D DG 12 ? ? "C4'" D DG 12 ? ? 1.556 1.512 0.044 0.007 N 7 1 "O4'" D DG 12 ? ? "C1'" D DG 12 ? ? 1.331 1.418 -0.087 0.012 N 8 1 "O3'" D DG 12 ? ? "C3'" D DG 12 ? ? 1.362 1.419 -0.057 0.006 N 9 1 "C1'" D DG 12 ? ? N9 D DG 12 ? ? 1.371 1.468 -0.097 0.014 N 10 1 C2 D DG 12 ? ? N3 D DG 12 ? ? 1.381 1.323 0.058 0.008 N 11 1 N3 D DA 13 ? ? C4 D DA 13 ? ? 1.289 1.344 -0.055 0.006 N 12 1 C5 D DG 15 ? ? N7 D DG 15 ? ? 1.426 1.388 0.038 0.006 N 13 1 CD A GLU 2 ? ? OE2 A GLU 2 ? ? 1.330 1.252 0.078 0.011 N 14 1 CD A GLU 6 ? ? OE1 A GLU 6 ? ? 1.320 1.252 0.068 0.011 N 15 1 CD A GLU 13 ? ? OE2 A GLU 13 ? ? 1.322 1.252 0.070 0.011 N 16 1 CD A GLU 19 ? ? OE2 A GLU 19 ? ? 1.323 1.252 0.071 0.011 N 17 1 CD A GLU 59 ? ? OE1 A GLU 59 ? ? 1.321 1.252 0.069 0.011 N 18 1 CD A GLU 86 ? ? OE2 A GLU 86 ? ? 1.320 1.252 0.068 0.011 N 19 1 CD A GLU 90 ? ? OE2 A GLU 90 ? ? 1.320 1.252 0.068 0.011 N 20 1 CD A GLU 100 ? ? OE2 A GLU 100 ? ? 1.326 1.252 0.074 0.011 N 21 1 CD A GLU 103 ? ? OE2 A GLU 103 ? ? 1.325 1.252 0.073 0.011 N 22 1 CD B GLU 2 ? ? OE2 B GLU 2 ? ? 1.325 1.252 0.073 0.011 N 23 1 CD B GLU 13 ? ? OE1 B GLU 13 ? ? 1.321 1.252 0.069 0.011 N 24 1 CD B GLU 19 ? ? OE2 B GLU 19 ? ? 1.328 1.252 0.076 0.011 N 25 1 CD B GLU 39 ? ? OE2 B GLU 39 ? ? 1.330 1.252 0.078 0.011 N 26 1 CD B GLU 79 ? ? OE1 B GLU 79 ? ? 1.324 1.252 0.072 0.011 N 27 1 CD B GLU 86 ? ? OE2 B GLU 86 ? ? 1.322 1.252 0.070 0.011 N 28 1 CD B GLU 90 ? ? OE1 B GLU 90 ? ? 1.319 1.252 0.067 0.011 N 29 1 CD B GLU 103 ? ? OE1 B GLU 103 ? ? 1.323 1.252 0.071 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 3 ? ? "C1'" C DA 3 ? ? N9 C DA 3 ? ? 102.53 108.00 -5.47 0.70 N 2 1 "O4'" C DG 4 ? ? "C1'" C DG 4 ? ? "C2'" C DG 4 ? ? 100.01 105.90 -5.89 0.80 N 3 1 "O4'" C DA 5 ? ? "C1'" C DA 5 ? ? N9 C DA 5 ? ? 103.57 108.00 -4.43 0.70 N 4 1 "O4'" C DC 6 ? ? "C1'" C DC 6 ? ? N1 C DC 6 ? ? 112.87 108.30 4.57 0.30 N 5 1 "O4'" D DG 12 ? ? "C1'" D DG 12 ? ? "C2'" D DG 12 ? ? 99.47 105.90 -6.43 0.80 N 6 1 "O4'" D DG 12 ? ? "C1'" D DG 12 ? ? N9 D DG 12 ? ? 103.02 108.00 -4.98 0.70 N 7 1 "O4'" D DT 16 ? ? "C1'" D DT 16 ? ? N1 D DT 16 ? ? 112.78 108.30 4.48 0.30 N 8 1 "O4'" D DC 17 ? ? "C1'" D DC 17 ? ? N1 D DC 17 ? ? 110.15 108.30 1.85 0.30 N 9 1 "O4'" D DT 18 ? ? "C1'" D DT 18 ? ? "C2'" D DT 18 ? ? 100.48 105.90 -5.42 0.80 N 10 1 CB A ASP 82 ? ? CG A ASP 82 ? ? OD2 A ASP 82 ? ? 112.67 118.30 -5.63 0.90 N 11 1 CB B ASP 73 ? ? CG B ASP 73 ? ? OD1 B ASP 73 ? ? 112.76 118.30 -5.54 0.90 N 12 1 CB B ASP 75 ? ? CG B ASP 75 ? ? OD2 B ASP 75 ? ? 111.56 118.30 -6.74 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 47 ? ? 35.24 51.79 2 1 ALA A 51 ? ? -103.61 73.00 3 1 GLN A 68 ? ? -28.50 126.94 4 1 GLU A 83 ? ? -132.96 -155.23 5 1 PRO A 85 ? ? -48.32 156.98 6 1 TRP A 102 ? ? -30.08 105.81 7 1 GLU B 2 ? ? -174.59 -26.06 8 1 HIS B 14 ? ? -39.46 142.71 9 1 SER B 18 ? ? -59.62 -0.05 10 1 ASN B 46 ? ? -72.80 23.26 11 1 ASN B 47 ? ? 35.65 82.63 12 1 GLN B 68 ? ? -35.73 146.40 13 1 ASP B 82 ? ? -56.04 107.72 14 1 GLU B 83 ? ? -143.72 -158.48 15 1 TRP B 102 ? ? -49.30 100.00 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SAM N N N N 433 SAM CA C N S 434 SAM C C N N 435 SAM O O N N 436 SAM OXT O N N 437 SAM CB C N N 438 SAM CG C N N 439 SAM SD S N S 440 SAM CE C N N 441 SAM "C5'" C N N 442 SAM "C4'" C N S 443 SAM "O4'" O N N 444 SAM "C3'" C N S 445 SAM "O3'" O N N 446 SAM "C2'" C N R 447 SAM "O2'" O N N 448 SAM "C1'" C N R 449 SAM N9 N Y N 450 SAM C8 C Y N 451 SAM N7 N Y N 452 SAM C5 C Y N 453 SAM C6 C Y N 454 SAM N6 N N N 455 SAM N1 N Y N 456 SAM C2 C Y N 457 SAM N3 N Y N 458 SAM C4 C Y N 459 SAM HN1 H N N 460 SAM HN2 H N N 461 SAM HA H N N 462 SAM HB1 H N N 463 SAM HB2 H N N 464 SAM HG1 H N N 465 SAM HG2 H N N 466 SAM HE1 H N N 467 SAM HE2 H N N 468 SAM HE3 H N N 469 SAM "H5'1" H N N 470 SAM "H5'2" H N N 471 SAM "H4'" H N N 472 SAM "H3'" H N N 473 SAM "HO3'" H N N 474 SAM "H2'" H N N 475 SAM "HO2'" H N N 476 SAM "H1'" H N N 477 SAM H8 H N N 478 SAM HN61 H N N 479 SAM HN62 H N N 480 SAM H2 H N N 481 SER N N N N 482 SER CA C N S 483 SER C C N N 484 SER O O N N 485 SER CB C N N 486 SER OG O N N 487 SER OXT O N N 488 SER H H N N 489 SER H2 H N N 490 SER HA H N N 491 SER HB2 H N N 492 SER HB3 H N N 493 SER HG H N N 494 SER HXT H N N 495 THR N N N N 496 THR CA C N S 497 THR C C N N 498 THR O O N N 499 THR CB C N R 500 THR OG1 O N N 501 THR CG2 C N N 502 THR OXT O N N 503 THR H H N N 504 THR H2 H N N 505 THR HA H N N 506 THR HB H N N 507 THR HG1 H N N 508 THR HG21 H N N 509 THR HG22 H N N 510 THR HG23 H N N 511 THR HXT H N N 512 TRP N N N N 513 TRP CA C N S 514 TRP C C N N 515 TRP O O N N 516 TRP CB C N N 517 TRP CG C Y N 518 TRP CD1 C Y N 519 TRP CD2 C Y N 520 TRP NE1 N Y N 521 TRP CE2 C Y N 522 TRP CE3 C Y N 523 TRP CZ2 C Y N 524 TRP CZ3 C Y N 525 TRP CH2 C Y N 526 TRP OXT O N N 527 TRP H H N N 528 TRP H2 H N N 529 TRP HA H N N 530 TRP HB2 H N N 531 TRP HB3 H N N 532 TRP HD1 H N N 533 TRP HE1 H N N 534 TRP HE3 H N N 535 TRP HZ2 H N N 536 TRP HZ3 H N N 537 TRP HH2 H N N 538 TRP HXT H N N 539 TYR N N N N 540 TYR CA C N S 541 TYR C C N N 542 TYR O O N N 543 TYR CB C N N 544 TYR CG C Y N 545 TYR CD1 C Y N 546 TYR CD2 C Y N 547 TYR CE1 C Y N 548 TYR CE2 C Y N 549 TYR CZ C Y N 550 TYR OH O N N 551 TYR OXT O N N 552 TYR H H N N 553 TYR H2 H N N 554 TYR HA H N N 555 TYR HB2 H N N 556 TYR HB3 H N N 557 TYR HD1 H N N 558 TYR HD2 H N N 559 TYR HE1 H N N 560 TYR HE2 H N N 561 TYR HH H N N 562 TYR HXT H N N 563 VAL N N N N 564 VAL CA C N S 565 VAL C C N N 566 VAL O O N N 567 VAL CB C N N 568 VAL CG1 C N N 569 VAL CG2 C N N 570 VAL OXT O N N 571 VAL H H N N 572 VAL H2 H N N 573 VAL HA H N N 574 VAL HB H N N 575 VAL HG11 H N N 576 VAL HG12 H N N 577 VAL HG13 H N N 578 VAL HG21 H N N 579 VAL HG22 H N N 580 VAL HG23 H N N 581 VAL HXT H N N 582 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SAM N CA sing N N 426 SAM N HN1 sing N N 427 SAM N HN2 sing N N 428 SAM CA C sing N N 429 SAM CA CB sing N N 430 SAM CA HA sing N N 431 SAM C O doub N N 432 SAM C OXT sing N N 433 SAM CB CG sing N N 434 SAM CB HB1 sing N N 435 SAM CB HB2 sing N N 436 SAM CG SD sing N N 437 SAM CG HG1 sing N N 438 SAM CG HG2 sing N N 439 SAM SD CE sing N N 440 SAM SD "C5'" sing N N 441 SAM CE HE1 sing N N 442 SAM CE HE2 sing N N 443 SAM CE HE3 sing N N 444 SAM "C5'" "C4'" sing N N 445 SAM "C5'" "H5'1" sing N N 446 SAM "C5'" "H5'2" sing N N 447 SAM "C4'" "O4'" sing N N 448 SAM "C4'" "C3'" sing N N 449 SAM "C4'" "H4'" sing N N 450 SAM "O4'" "C1'" sing N N 451 SAM "C3'" "O3'" sing N N 452 SAM "C3'" "C2'" sing N N 453 SAM "C3'" "H3'" sing N N 454 SAM "O3'" "HO3'" sing N N 455 SAM "C2'" "O2'" sing N N 456 SAM "C2'" "C1'" sing N N 457 SAM "C2'" "H2'" sing N N 458 SAM "O2'" "HO2'" sing N N 459 SAM "C1'" N9 sing N N 460 SAM "C1'" "H1'" sing N N 461 SAM N9 C8 sing Y N 462 SAM N9 C4 sing Y N 463 SAM C8 N7 doub Y N 464 SAM C8 H8 sing N N 465 SAM N7 C5 sing Y N 466 SAM C5 C6 sing Y N 467 SAM C5 C4 doub Y N 468 SAM C6 N6 sing N N 469 SAM C6 N1 doub Y N 470 SAM N6 HN61 sing N N 471 SAM N6 HN62 sing N N 472 SAM N1 C2 sing Y N 473 SAM C2 N3 doub Y N 474 SAM C2 H2 sing N N 475 SAM N3 C4 sing Y N 476 SER N CA sing N N 477 SER N H sing N N 478 SER N H2 sing N N 479 SER CA C sing N N 480 SER CA CB sing N N 481 SER CA HA sing N N 482 SER C O doub N N 483 SER C OXT sing N N 484 SER CB OG sing N N 485 SER CB HB2 sing N N 486 SER CB HB3 sing N N 487 SER OG HG sing N N 488 SER OXT HXT sing N N 489 THR N CA sing N N 490 THR N H sing N N 491 THR N H2 sing N N 492 THR CA C sing N N 493 THR CA CB sing N N 494 THR CA HA sing N N 495 THR C O doub N N 496 THR C OXT sing N N 497 THR CB OG1 sing N N 498 THR CB CG2 sing N N 499 THR CB HB sing N N 500 THR OG1 HG1 sing N N 501 THR CG2 HG21 sing N N 502 THR CG2 HG22 sing N N 503 THR CG2 HG23 sing N N 504 THR OXT HXT sing N N 505 TRP N CA sing N N 506 TRP N H sing N N 507 TRP N H2 sing N N 508 TRP CA C sing N N 509 TRP CA CB sing N N 510 TRP CA HA sing N N 511 TRP C O doub N N 512 TRP C OXT sing N N 513 TRP CB CG sing N N 514 TRP CB HB2 sing N N 515 TRP CB HB3 sing N N 516 TRP CG CD1 doub Y N 517 TRP CG CD2 sing Y N 518 TRP CD1 NE1 sing Y N 519 TRP CD1 HD1 sing N N 520 TRP CD2 CE2 doub Y N 521 TRP CD2 CE3 sing Y N 522 TRP NE1 CE2 sing Y N 523 TRP NE1 HE1 sing N N 524 TRP CE2 CZ2 sing Y N 525 TRP CE3 CZ3 doub Y N 526 TRP CE3 HE3 sing N N 527 TRP CZ2 CH2 doub Y N 528 TRP CZ2 HZ2 sing N N 529 TRP CZ3 CH2 sing Y N 530 TRP CZ3 HZ3 sing N N 531 TRP CH2 HH2 sing N N 532 TRP OXT HXT sing N N 533 TYR N CA sing N N 534 TYR N H sing N N 535 TYR N H2 sing N N 536 TYR CA C sing N N 537 TYR CA CB sing N N 538 TYR CA HA sing N N 539 TYR C O doub N N 540 TYR C OXT sing N N 541 TYR CB CG sing N N 542 TYR CB HB2 sing N N 543 TYR CB HB3 sing N N 544 TYR CG CD1 doub Y N 545 TYR CG CD2 sing Y N 546 TYR CD1 CE1 sing Y N 547 TYR CD1 HD1 sing N N 548 TYR CD2 CE2 doub Y N 549 TYR CD2 HD2 sing N N 550 TYR CE1 CZ doub Y N 551 TYR CE1 HE1 sing N N 552 TYR CE2 CZ sing Y N 553 TYR CE2 HE2 sing N N 554 TYR CZ OH sing N N 555 TYR OH HH sing N N 556 TYR OXT HXT sing N N 557 VAL N CA sing N N 558 VAL N H sing N N 559 VAL N H2 sing N N 560 VAL CA C sing N N 561 VAL CA CB sing N N 562 VAL CA HA sing N N 563 VAL C O doub N N 564 VAL C OXT sing N N 565 VAL CB CG1 sing N N 566 VAL CB CG2 sing N N 567 VAL CB HB sing N N 568 VAL CG1 HG11 sing N N 569 VAL CG1 HG12 sing N N 570 VAL CG1 HG13 sing N N 571 VAL CG2 HG21 sing N N 572 VAL CG2 HG22 sing N N 573 VAL CG2 HG23 sing N N 574 VAL OXT HXT sing N N 575 # _ndb_struct_conf_na.entry_id 1CMA _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 2 1_555 B DA 9 1_555 -0.168 0.162 0.412 0.128 -7.339 3.251 1 C_DT2:DA19_D C 2 ? D 19 ? 20 1 1 A DA 3 1_555 B DT 8 1_555 0.190 -0.127 0.382 3.132 -4.984 2.644 2 C_DA3:DT18_D C 3 ? D 18 ? 20 1 1 A DG 4 1_555 B DC 7 1_555 -0.094 -0.299 0.099 3.331 -6.004 6.079 3 C_DG4:DC17_D C 4 ? D 17 ? 19 1 1 A DA 5 1_555 B DT 6 1_555 -0.158 -0.318 0.023 2.928 -17.234 1.148 4 C_DA5:DT16_D C 5 ? D 16 ? 20 1 1 A DC 6 1_555 B DG 5 1_555 -0.035 -0.413 -0.175 0.327 -11.404 -13.142 5 C_DC6:DG15_D C 6 ? D 15 ? 19 1 1 A DG 7 1_555 B DC 4 1_555 0.396 -0.342 -0.215 -3.230 -8.480 -2.563 6 C_DG7:DC14_D C 7 ? D 14 ? 19 1 1 A DT 8 1_555 B DA 3 1_555 -0.608 -0.341 -0.272 2.511 -7.048 -8.496 7 C_DT8:DA13_D C 8 ? D 13 ? 20 1 1 A DC 9 1_555 B DG 2 1_555 -0.164 -0.414 0.076 2.355 -5.626 -3.950 8 C_DC9:DG12_D C 9 ? D 12 ? 19 1 1 A DT 10 1_555 B DA 1 1_555 -0.949 -0.339 0.206 4.709 -10.112 -6.327 9 C_DT10:DA11_D C 10 ? D 11 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 2 1_555 B DA 9 1_555 A DA 3 1_555 B DT 8 1_555 -0.284 0.808 3.489 0.743 10.659 40.311 -0.101 0.486 3.575 15.147 -1.055 41.646 1 CC_DT2DA3:DT18DA19_DD C 2 ? D 19 ? C 3 ? D 18 ? 1 A DA 3 1_555 B DT 8 1_555 A DG 4 1_555 B DC 7 1_555 0.478 -0.711 3.367 -1.330 10.086 26.476 -3.757 -1.281 2.880 21.060 2.778 28.330 2 CC_DA3DG4:DC17DT18_DD C 3 ? D 18 ? C 4 ? D 17 ? 1 A DG 4 1_555 B DC 7 1_555 A DA 5 1_555 B DT 6 1_555 -0.827 -0.304 3.362 -3.701 2.077 34.673 -0.833 0.796 3.406 3.469 6.181 34.924 3 CC_DG4DA5:DT16DC17_DD C 4 ? D 17 ? C 5 ? D 16 ? 1 A DA 5 1_555 B DT 6 1_555 A DC 6 1_555 B DG 5 1_555 -0.614 -0.430 3.467 -0.058 6.077 31.626 -1.912 1.096 3.330 11.024 0.105 32.190 4 CC_DA5DC6:DG15DT16_DD C 5 ? D 16 ? C 6 ? D 15 ? 1 A DC 6 1_555 B DG 5 1_555 A DG 7 1_555 B DC 4 1_555 0.205 -0.024 3.587 0.264 8.673 35.422 -1.359 -0.287 3.486 13.997 -0.426 36.437 5 CC_DC6DG7:DC14DG15_DD C 6 ? D 15 ? C 7 ? D 14 ? 1 A DG 7 1_555 B DC 4 1_555 A DT 8 1_555 B DA 3 1_555 -0.417 -0.249 3.301 0.630 3.732 26.913 -1.471 1.047 3.227 7.969 -1.346 27.173 6 CC_DG7DT8:DA13DC14_DD C 7 ? D 14 ? C 8 ? D 13 ? 1 A DT 8 1_555 B DA 3 1_555 A DC 9 1_555 B DG 2 1_555 0.827 0.068 3.372 0.872 1.808 37.880 -0.135 -1.158 3.389 2.783 -1.342 37.931 7 CC_DT8DC9:DG12DA13_DD C 8 ? D 13 ? C 9 ? D 12 ? 1 A DC 9 1_555 B DG 2 1_555 A DT 10 1_555 B DA 1 1_555 -0.325 -0.802 3.459 -0.819 2.827 24.697 -2.750 0.496 3.356 6.579 1.906 24.869 8 CC_DC9DT10:DA11DG12_DD C 9 ? D 12 ? C 10 ? D 11 ? # _atom_sites.entry_id 1CMA _atom_sites.fract_transf_matrix[1][1] 0.008241 _atom_sites.fract_transf_matrix[1][2] 0.004758 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009515 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011791 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_