HEADER OXIDOREDUCTASE 19-FEB-92 1COB TITLE CRYSTAL STRUCTURE SOLUTION AND REFINEMENT OF THE SEMISYNTHETIC COBALT TITLE 2 SUBSTITUTED BOVINE ERYTHROCYTE ENZYME SUPEROXIDE DISMUTASE AT 2.0 TITLE 3 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.DJINOVIC,A.CODA,L.ANTOLINI,G.PELOSI,A.DESIDERI,M.FALCONI,G.ROTILIO, AUTHOR 2 M.BOLOGNESI REVDAT 4 23-OCT-24 1COB 1 REMARK LINK REVDAT 3 24-FEB-09 1COB 1 VERSN REVDAT 2 01-APR-03 1COB 1 JRNL REVDAT 1 31-OCT-93 1COB 0 JRNL AUTH K.DJINOVIC,A.CODA,L.ANTOLINI,G.PELOSI,A.DESIDERI,M.FALCONI, JRNL AUTH 2 G.ROTILIO,M.BOLOGNESI JRNL TITL CRYSTAL STRUCTURE SOLUTION AND REFINEMENT OF THE JRNL TITL 2 SEMISYNTHETIC COBALT-SUBSTITUTED BOVINE ERYTHROCYTE JRNL TITL 3 SUPEROXIDE DISMUTASE AT 2.0 A RESOLUTION. JRNL REF J.MOL.BIOL. V. 226 227 1992 JRNL REFN ISSN 0022-2836 JRNL PMID 1619651 JRNL DOI 10.1016/0022-2836(92)90135-7 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.DJINOVIC,G.GATTI,A.CODA,L.ANTOLINI,G.PELOSI,A.DESIDERI, REMARK 1 AUTH 2 M.FALCONI,F.MARMOCCHI,G.ROTILIO,M.BOLOGNESI REMARK 1 TITL CRYSTAL STRUCTURE OF YEAST CU,ZN SUPEROXIDE DISMUTASE. REMARK 1 TITL 2 CRYSTALLOGRAPHIC REFINEMENT AT 2.5 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 225 791 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.DJINOVIC,G.GATTI,A.CODA REMARK 1 TITL STRUCTURE SOLUTION AND MOLECULAR DYNAMICS REFINEMENT OF THE REMARK 1 TITL 2 YEAST CU,ZN ENZYME SUPEROXIDE DISMUTASE REMARK 1 REF ACTA CRYSTALLOGR.,SECT.B V. 47 918 1991 REMARK 1 REFN ISSN 0108-7681 REMARK 1 REFERENCE 3 REMARK 1 AUTH Y.KITAGAWA,N.TANAKA,Y.HATA,M.KUSONOKI,G.LEE,Y.KATSUBE, REMARK 1 AUTH 2 K.ASADA,S.AIBARA,Y.MORITA REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF CU,ZN SUPEROXIDE DISMUTASE REMARK 1 TITL 2 FROM SPINACH AT 2.0 ANGSTROMS RESOLUTION REMARK 1 REF J.BIOCHEM.(TOKYO) V. 109 447 1991 REMARK 1 REFN ISSN 0021-924X REMARK 1 REFERENCE 4 REMARK 1 AUTH E.D.GETZOFF,J.A.TAINER,M.M.STEMPIEN,G.I.BELL,R.A.HALLEWELL REMARK 1 TITL EVOLUTION OF CU,ZN SUPEROXIDE DISMUTASE AND THE GREEK-KEY REMARK 1 TITL 2 B-BARREL STRUCTURAL MOTIF REMARK 1 REF PROTEINS V. 5 322 1989 REMARK 1 REFN ISSN 0887-3585 REMARK 1 REFERENCE 5 REMARK 1 AUTH J.A.TAINER,E.D.GETZOFF,K.M.BEEM,J.S.RICHARDSON, REMARK 1 AUTH 2 D.C.RICHARDSON REMARK 1 TITL DETERMINATION AND ANALYSIS OF THE 2 ANGSTROMS STRUCTURE OF REMARK 1 TITL 2 COPPER, ZINC SUPEROXIDE DISMUTASE REMARK 1 REF J.MOL.BIOL. V. 160 181 1982 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 18876 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2184 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : NULL ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1COB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172427. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.49500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.76500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.81500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 23.76500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.49500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.81500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR CHAIN B WHEN APPLIED TO REMARK 300 CHAIN A. THE RMS DEVIATION OF THE CA ATOMS IS 0.282 REMARK 300 ANGSTROMS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 129 N GLU A 130 1.66 REMARK 500 OE2 GLU B 119 O HOH B 254 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 106 N GLY A 106 CA -0.175 REMARK 500 GLY A 125 C ARG A 126 N -0.288 REMARK 500 ASN A 129 C GLU A 130 N -0.665 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 106 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 GLY A 125 CA - C - N ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG A 126 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 126 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 130 -55.26 -24.57 REMARK 500 ASP B 11 57.31 -95.12 REMARK 500 PRO B 60 -169.34 -78.45 REMARK 500 ASN B 90 28.06 -75.30 REMARK 500 ASP B 96 90.42 -161.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 126 0.16 SIDE CHAIN REMARK 500 ARG B 126 0.17 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 125 -26.43 REMARK 500 ASN A 129 18.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 44 ND1 REMARK 620 2 HIS A 46 NE2 148.2 REMARK 620 3 HIS A 61 NE2 81.7 97.3 REMARK 620 4 HIS A 118 NE2 95.8 100.4 149.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 153 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 61 ND1 REMARK 620 2 HIS A 69 ND1 111.6 REMARK 620 3 HIS A 78 ND1 115.2 115.3 REMARK 620 4 ASP A 81 OD1 93.4 99.2 119.3 REMARK 620 5 ASP A 81 OD2 144.7 74.7 90.2 51.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 152 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 44 ND1 REMARK 620 2 HIS B 46 NE2 142.0 REMARK 620 3 HIS B 61 NE2 79.0 100.1 REMARK 620 4 HIS B 118 NE2 97.5 94.9 159.5 REMARK 620 5 HOH B 154 O 121.6 94.6 77.5 87.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 153 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 61 ND1 REMARK 620 2 HIS B 69 ND1 107.6 REMARK 620 3 HIS B 78 ND1 115.6 118.4 REMARK 620 4 ASP B 81 OD1 94.0 93.0 124.0 REMARK 620 5 ASP B 81 OD2 149.0 81.8 82.7 55.5 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 STRAND 4 OF SHEETS SMA AND SMB EXTENDS FROM 141 - 146. REMARK 700 ACCORDING TO KABSCH AND SANDER CRITERIA RESIDUE 147 CANNOT REMARK 700 BE ATTRIBUTED AN EXTENDED CONFORMATION AND, THEREFORE, THE REMARK 700 BETA STRAND IS INTERRUPTED AT THIS SITE. NEVERTHELESS REMARK 700 THERE IS A HYDROGEN-BONDING INTERACTION BETWEEN RESIDUES REMARK 700 CAL 5 AND GLY 148, AS IF THE BETA STRAND ACTUALLY CONTINUED REMARK 700 FOR ONE RESIDUE AFTER 147. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: A REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: B REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 153 DBREF 1COB A 1 151 UNP P00442 SODC_BOVIN 1 151 DBREF 1COB B 1 151 UNP P00442 SODC_BOVIN 1 151 SEQRES 1 A 151 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 A 151 VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP THR SEQRES 3 A 151 VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU GLY SEQRES 4 A 151 ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN THR SEQRES 5 A 151 GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO LEU SEQRES 6 A 151 SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG HIS SEQRES 7 A 151 VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN GLY SEQRES 8 A 151 VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER LEU SEQRES 9 A 151 SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL VAL SEQRES 10 A 151 HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN GLU SEQRES 11 A 151 GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU ALA SEQRES 12 A 151 CYS GLY VAL ILE GLY ILE ALA LYS SEQRES 1 B 151 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 B 151 VAL GLN GLY THR ILE HIS PHE GLU ALA LYS GLY ASP THR SEQRES 3 B 151 VAL VAL VAL THR GLY SER ILE THR GLY LEU THR GLU GLY SEQRES 4 B 151 ASP HIS GLY PHE HIS VAL HIS GLN PHE GLY ASP ASN THR SEQRES 5 B 151 GLN GLY CYS THR SER ALA GLY PRO HIS PHE ASN PRO LEU SEQRES 6 B 151 SER LYS LYS HIS GLY GLY PRO LYS ASP GLU GLU ARG HIS SEQRES 7 B 151 VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS ASN GLY SEQRES 8 B 151 VAL ALA ILE VAL ASP ILE VAL ASP PRO LEU ILE SER LEU SEQRES 9 B 151 SER GLY GLU TYR SER ILE ILE GLY ARG THR MET VAL VAL SEQRES 10 B 151 HIS GLU LYS PRO ASP ASP LEU GLY ARG GLY GLY ASN GLU SEQRES 11 B 151 GLU SER THR LYS THR GLY ASN ALA GLY SER ARG LEU ALA SEQRES 12 B 151 CYS GLY VAL ILE GLY ILE ALA LYS HET CU A 152 1 HET CO A 153 1 HET CU B 152 1 HET CO B 153 1 HETNAM CU COPPER (II) ION HETNAM CO COBALT (II) ION FORMUL 3 CU 2(CU 2+) FORMUL 4 CO 2(CO 2+) FORMUL 7 HOH *199(H2 O) HELIX 1 H1 GLU A 130 THR A 135 1SEE REMARK 6 6 SHEET 1 BGA 4 LYS A 3 LEU A 8 0 SHEET 2 BGA 4 GLN A 15 LYS A 23 -1 O PHE A 20 N ALA A 4 SHEET 3 BGA 4 VAL A 27 THR A 34 -1 O VAL A 28 N GLU A 21 SHEET 4 BGA 4 ALA A 93 ASP A 99 -1 O ASP A 99 N VAL A 27 SHEET 1 SMA 5 ASP A 81 ALA A 87 0 SHEET 2 SMA 5 GLY A 39 HIS A 46 -1 N GLY A 39 O ALA A 87 SHEET 3 SMA 5 THR A 114 HIS A 118 -1 O VAL A 116 N HIS A 44 SHEET 4 SMA 5 ARG A 141 VAL A 146 -1 O GLY A 145 N MET A 115 SHEET 5 SMA 5 LYS A 3 LEU A 8 -1 SHEET 1 BGB 4 LYS B 3 LEU B 8 0 SHEET 2 BGB 4 GLN B 15 LYS B 23 -1 O PHE B 20 N ALA B 4 SHEET 3 BGB 4 VAL B 27 THR B 34 -1 O VAL B 28 N GLU B 21 SHEET 4 BGB 4 ALA B 93 ASP B 99 -1 O ASP B 99 N VAL B 27 SHEET 1 SMB 5 ASP B 81 ALA B 87 0 SHEET 2 SMB 5 GLY B 39 HIS B 46 -1 N GLY B 39 O ALA B 87 SHEET 3 SMB 5 THR B 114 HIS B 118 -1 O VAL B 116 N HIS B 44 SHEET 4 SMB 5 ARG B 141 VAL B 146 -1 O GLY B 145 N MET B 115 SHEET 5 SMB 5 LYS B 3 LEU B 8 -1 SSBOND 1 CYS A 55 CYS A 144 1555 1555 2.01 SSBOND 2 CYS B 55 CYS B 144 1555 1555 2.03 LINK ND1 HIS A 44 CU CU A 152 1555 1555 2.09 LINK NE2 HIS A 46 CU CU A 152 1555 1555 2.29 LINK NE2 HIS A 61 CU CU A 152 1555 1555 2.16 LINK ND1 HIS A 61 CO CO A 153 1555 1555 2.11 LINK ND1 HIS A 69 CO CO A 153 1555 1555 2.01 LINK ND1 HIS A 78 CO CO A 153 1555 1555 2.02 LINK OD1 ASP A 81 CO CO A 153 1555 1555 1.99 LINK OD2 ASP A 81 CO CO A 153 1555 1555 2.76 LINK NE2 HIS A 118 CU CU A 152 1555 1555 2.13 LINK ND1 HIS B 44 CU CU B 152 1555 1555 2.02 LINK NE2 HIS B 46 CU CU B 152 1555 1555 2.18 LINK NE2 HIS B 61 CU CU B 152 1555 1555 1.99 LINK ND1 HIS B 61 CO CO B 153 1555 1555 1.99 LINK ND1 HIS B 69 CO CO B 153 1555 1555 2.32 LINK ND1 HIS B 78 CO CO B 153 1555 1555 1.97 LINK OD1 ASP B 81 CO CO B 153 1555 1555 1.96 LINK OD2 ASP B 81 CO CO B 153 1555 1555 2.67 LINK NE2 HIS B 118 CU CU B 152 1555 1555 2.14 LINK CU CU B 152 O HOH B 154 1555 1555 2.38 SITE 1 A 9 CU A 152 HIS A 44 HIS A 46 HIS A 61 SITE 2 A 9 HIS A 118 CO A 153 HIS A 69 HIS A 78 SITE 3 A 9 ASP A 81 SITE 1 B 9 CU B 152 HIS B 44 HIS B 46 HIS B 61 SITE 2 B 9 HIS B 118 CO B 153 HIS B 69 HIS B 78 SITE 3 B 9 ASP B 81 SITE 1 AC1 5 HIS A 44 HIS A 46 HIS A 61 HIS A 118 SITE 2 AC1 5 HOH A 237 SITE 1 AC2 4 HIS A 61 HIS A 69 HIS A 78 ASP A 81 SITE 1 AC3 5 HIS B 44 HIS B 46 HIS B 61 HIS B 118 SITE 2 AC3 5 HOH B 154 SITE 1 AC4 4 HIS B 61 HIS B 69 HIS B 78 ASP B 81 CRYST1 50.990 147.630 47.530 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019612 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006774 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021039 0.00000 MTRIX1 1 0.568180 -0.204340 -0.797130 27.52600 1 MTRIX2 1 -0.220220 -0.971100 0.091970 119.95300 1 MTRIX3 1 -0.792890 0.123290 -0.596760 22.21900 1