data_1CS7
#
_entry.id 1CS7
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.385
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1CS7 pdb_00001cs7 10.2210/pdb1cs7/pdb
NDB DD0019 ? ?
RCSB RCSB009523 ? ?
WWPDB D_1000009523 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2001-10-19
2 'Structure model' 1 1 2008-04-27
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2024-02-07
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' chem_comp_atom
2 4 'Structure model' chem_comp_bond
3 4 'Structure model' database_2
4 4 'Structure model' struct_conn
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1CS7
_pdbx_database_status.recvd_initial_deposition_date 1999-08-17
_pdbx_database_status.deposit_site NDB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Lewis, F.D.' 1
'Liu, X.' 2
'Wu, Y.' 3
'Miller, S.E.' 4
'Wasielewski, M.R.' 5
'Letsinger, R.L.' 6
'Sanishvili, R.' 7
'Joachimiak, A.' 8
'Tereshko, V.' 9
'Egli, M.' 10
#
_citation.id primary
_citation.title
'Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic DNA Hairpins with Stilbenediether Linkers'
_citation.journal_abbrev J.Am.Chem.Soc.
_citation.journal_volume 121
_citation.page_first 9905
_citation.page_last 9906
_citation.year 1999
_citation.journal_id_ASTM JACSAT
_citation.country US
_citation.journal_id_ISSN 0002-7863
_citation.journal_id_CSD 0004
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed -1
_citation.pdbx_database_id_DOI 10.1021/ja991934u
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Lewis, F.D.' 1 ?
primary 'Liu, X.' 2 ?
primary 'Wu, Y.' 3 ?
primary 'Miller, S.E.' 4 ?
primary 'Wasielewski, M.R.' 5 ?
primary 'Letsinger, R.L.' 6 ?
primary 'Sanishvili, R.' 7 ?
primary 'Joachimiak, A.' 8 ?
primary 'Tereshko, V.' 9 ?
primary 'Egli, M.' 10 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn "5'-D(GP*(BRU)P*TP*TP*TP*GP*(S02)*CP*AP*AP*AP*AP*C)-3'" 4098.678 4 ? ? ? ?
2 non-polymer syn 'STRONTIUM ION' 87.620 4 ? ? ? ?
3 water nat water 18.015 11 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code '(DG)(BRU)(DT)(DT)(DT)(DG)(S02)(DC)(DA)(DA)(DA)(DA)(DC)'
_entity_poly.pdbx_seq_one_letter_code_can GUTTTGXCAAAAC
_entity_poly.pdbx_strand_id A,B,C,D
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'STRONTIUM ION' SR
3 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DG n
1 2 BRU n
1 3 DT n
1 4 DT n
1 5 DT n
1 6 DG n
1 7 S02 n
1 8 DC n
1 9 DA n
1 10 DA n
1 11 DA n
1 12 DA n
1 13 DC n
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
HOH non-polymer . WATER ? 'H2 O' 18.015
S02 non-polymer .
'PHOSPHORIC ACID MONO-[2-(4-{2-[4-(2-HYDROXY-ETHOXY)-CYCLOHEXYLIDENE]-ETHYLIDENE}-CYCLOHEXYLOXY) -ETHYL] ESTER'
'STILBENEDIETHER NUCLEOTIDE LINKER' 'C18 H31 O7 P' 390.408
SR non-polymer . 'STRONTIUM ION' ? 'Sr 2' 87.620
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DG 1 1 1 DG G A . n
A 1 2 BRU 2 2 2 BRU BRU A . n
A 1 3 DT 3 3 3 DT T A . n
A 1 4 DT 4 4 4 DT T A . n
A 1 5 DT 5 5 5 DT T A . n
A 1 6 DG 6 6 6 DG G A . n
A 1 7 S02 7 7 7 S02 S02 A . n
A 1 8 DC 8 9 9 DC C A . n
A 1 9 DA 9 10 10 DA A A . n
A 1 10 DA 10 11 11 DA A A . n
A 1 11 DA 11 12 12 DA A A . n
A 1 12 DA 12 13 13 DA A A . n
A 1 13 DC 13 14 14 DC C A . n
B 1 1 DG 1 101 101 DG G B . n
B 1 2 BRU 2 102 102 BRU BRU B . n
B 1 3 DT 3 103 103 DT T B . n
B 1 4 DT 4 104 104 DT T B . n
B 1 5 DT 5 105 105 DT T B . n
B 1 6 DG 6 106 106 DG G B . n
B 1 7 S02 7 107 107 S02 S02 B . n
B 1 8 DC 8 109 109 DC C B . n
B 1 9 DA 9 110 110 DA A B . n
B 1 10 DA 10 111 111 DA A B . n
B 1 11 DA 11 112 112 DA A B . n
B 1 12 DA 12 113 113 DA A B . n
B 1 13 DC 13 114 114 DC C B . n
C 1 1 DG 1 201 201 DG G C . n
C 1 2 BRU 2 202 202 BRU BRU C . n
C 1 3 DT 3 203 203 DT T C . n
C 1 4 DT 4 204 204 DT T C . n
C 1 5 DT 5 205 205 DT T C . n
C 1 6 DG 6 206 206 DG G C . n
C 1 7 S02 7 207 207 S02 S02 C . n
C 1 8 DC 8 209 209 DC C C . n
C 1 9 DA 9 210 210 DA A C . n
C 1 10 DA 10 211 211 DA A C . n
C 1 11 DA 11 212 212 DA A C . n
C 1 12 DA 12 213 213 DA A C . n
C 1 13 DC 13 214 214 DC C C . n
D 1 1 DG 1 301 301 DG G D . n
D 1 2 BRU 2 302 302 BRU BRU D . n
D 1 3 DT 3 303 303 DT T D . n
D 1 4 DT 4 304 304 DT T D . n
D 1 5 DT 5 305 305 DT T D . n
D 1 6 DG 6 306 306 DG G D . n
D 1 7 S02 7 307 307 S02 S02 D . n
D 1 8 DC 8 309 309 DC C D . n
D 1 9 DA 9 310 310 DA A D . n
D 1 10 DA 10 311 311 DA A D . n
D 1 11 DA 11 312 312 DA A D . n
D 1 12 DA 12 313 313 DA A D . n
D 1 13 DC 13 314 314 DC C D . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SR 1 402 402 SR SR A .
F 2 SR 1 404 404 SR SR B .
G 2 SR 1 403 403 SR SR C .
H 2 SR 1 401 401 SR SR D .
I 3 HOH 1 410 410 HOH TIP A .
I 3 HOH 2 413 413 HOH TIP A .
I 3 HOH 3 414 414 HOH TIP A .
I 3 HOH 4 415 415 HOH TIP A .
J 3 HOH 1 405 405 HOH TIP B .
J 3 HOH 2 407 407 HOH TIP B .
J 3 HOH 3 409 409 HOH TIP B .
K 3 HOH 1 406 406 HOH TIP C .
L 3 HOH 1 408 408 HOH TIP D .
L 3 HOH 2 411 411 HOH TIP D .
L 3 HOH 3 412 412 HOH TIP D .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
AMoRE phasing . ? 1
CNS refinement . ? 2
DENZO 'data reduction' . ? 3
SCALEPACK 'data scaling' . ? 4
#
_cell.entry_id 1CS7
_cell.length_a 27.76
_cell.length_b 67.89
_cell.length_c 61.83
_cell.angle_alpha 90.0
_cell.angle_beta 96.8
_cell.angle_gamma 90.0
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1CS7
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting monoclinic
_symmetry.Int_Tables_number 4
#
_exptl.entry_id 1CS7
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_percent_sol 64.05
_exptl_crystal.density_Matthews 3.42
_exptl_crystal.description ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.3
_exptl_crystal_grow.pdbx_details
'OLIGONUCLEOTIDE, SRCL2, NA-CACODYLATE BUFFER, 2-METHYL-2,4-PENTANEDIOL, pH 6.3, VAPOR DIFFUSION, HANGING DROP at 298K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 SRCL2 ? ? ?
1 2 1 'SODIUM CACODYLATE BUFFER' ? ? ?
1 3 1 MPD ? ? ?
1 4 2 MPD ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type APS-1
_diffrn_detector.pdbx_collection_date 1999-02-06
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'APS BEAMLINE 19-ID'
_diffrn_source.pdbx_synchrotron_site APS
_diffrn_source.pdbx_synchrotron_beamline 19-ID
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 1CS7
_reflns.observed_criterion_sigma_I 0
_reflns.observed_criterion_sigma_F 0
_reflns.d_resolution_low 30.0
_reflns.d_resolution_high 3.15
_reflns.number_obs 3434
_reflns.number_all 3434
_reflns.percent_possible_obs 97.1
_reflns.pdbx_Rmerge_I_obs 0.0970000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 3
_reflns.R_free_details ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 3.15
_reflns_shell.d_res_low 3.26
_reflns_shell.percent_possible_all 99.0
_reflns_shell.Rmerge_I_obs 0.0950000
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1CS7
_refine.ls_number_reflns_obs 2864
_refine.ls_number_reflns_all 3046
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.5
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 8.0
_refine.ls_d_res_high 3.2
_refine.ls_percent_reflns_obs 80.1
_refine.ls_R_factor_obs 0.2570000
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.2570000
_refine.ls_R_factor_R_free 0.2660000
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 7
_refine.ls_number_reflns_R_free 202
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'PARKINSON et al.'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 0
_refine_hist.pdbx_number_atoms_nucleic_acid 1072
_refine_hist.pdbx_number_atoms_ligand 4
_refine_hist.number_atoms_solvent 11
_refine_hist.number_atoms_total 1087
_refine_hist.d_res_high 3.2
_refine_hist.d_res_low 8.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg 1.71 ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ?
c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_database_PDB_matrix.entry_id 1CS7
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1CS7
_struct.title 'SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1CS7
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA HAIRPIN, DNA'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 1 ?
D N N 1 ?
E N N 2 ?
F N N 2 ?
G N N 2 ?
H N N 2 ?
I N N 3 ?
J N N 3 ?
K N N 3 ?
L N N 3 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1CS7
_struct_ref.pdbx_db_accession 1CS7
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1CS7 A 1 ? 13 ? 1CS7 1 ? 14 ? 1 14
2 1 1CS7 B 1 ? 13 ? 1CS7 101 ? 114 ? 101 114
3 1 1CS7 C 1 ? 13 ? 1CS7 201 ? 214 ? 201 214
4 1 1CS7 D 1 ? 13 ? 1CS7 301 ? 314 ? 301 314
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 author_defined_assembly ? monomeric 1
2 author_defined_assembly ? monomeric 1
3 author_defined_assembly ? monomeric 1
4 author_defined_assembly ? monomeric 1
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1 A,E,I
2 1 B,F,J
3 1 C,G,K
4 1 D,H,L
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_biol.id
_struct_biol.pdbx_parent_biol_id
_struct_biol.details
1 ? ?
2 ? ?
3 ? ?
4 ? ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A BRU 2 P ? ? A DG 1 A BRU 2 1_555 ? ? ? ? ? ? ? 1.622 ? ?
covale2 covale both ? A BRU 2 "O3'" ? ? ? 1_555 A DT 3 P ? ? A BRU 2 A DT 3 1_555 ? ? ? ? ? ? ? 1.599 ? ?
covale3 covale both ? A DG 6 "O3'" ? ? ? 1_555 A S02 7 P ? ? A DG 6 A S02 7 1_555 ? ? ? ? ? ? ? 1.597 ? ?
covale4 covale one ? A S02 7 "O3'" ? ? ? 1_555 A DC 8 P ? ? A S02 7 A DC 9 1_555 ? ? ? ? ? ? ? 1.600 ? ?
covale5 covale both ? B DG 1 "O3'" ? ? ? 1_555 B BRU 2 P ? ? B DG 101 B BRU 102 1_555 ? ? ? ? ? ? ? 1.586 ? ?
covale6 covale both ? B BRU 2 "O3'" ? ? ? 1_555 B DT 3 P ? ? B BRU 102 B DT 103 1_555 ? ? ? ? ? ? ? 1.610 ? ?
covale7 covale both ? B DG 6 "O3'" ? ? ? 1_555 B S02 7 P ? ? B DG 106 B S02 107 1_555 ? ? ? ? ? ? ? 1.590 ? ?
covale8 covale one ? B S02 7 "O3'" ? ? ? 1_555 B DC 8 P ? ? B S02 107 B DC 109 1_555 ? ? ? ? ? ? ? 1.605 ? ?
covale9 covale both ? C DG 1 "O3'" ? ? ? 1_555 C BRU 2 P ? ? C DG 201 C BRU 202 1_555 ? ? ? ? ? ? ? 1.612 ? ?
covale10 covale both ? C BRU 2 "O3'" ? ? ? 1_555 C DT 3 P ? ? C BRU 202 C DT 203 1_555 ? ? ? ? ? ? ? 1.595 ? ?
covale11 covale both ? C DG 6 "O3'" ? ? ? 1_555 C S02 7 P ? ? C DG 206 C S02 207 1_555 ? ? ? ? ? ? ? 1.570 ? ?
covale12 covale one ? C S02 7 "O3'" ? ? ? 1_555 C DC 8 P ? ? C S02 207 C DC 209 1_555 ? ? ? ? ? ? ? 1.603 ? ?
covale13 covale both ? D DG 1 "O3'" ? ? ? 1_555 D BRU 2 P ? ? D DG 301 D BRU 302 1_555 ? ? ? ? ? ? ? 1.625 ? ?
covale14 covale both ? D BRU 2 "O3'" ? ? ? 1_555 D DT 3 P ? ? D BRU 302 D DT 303 1_555 ? ? ? ? ? ? ? 1.587 ? ?
covale15 covale both ? D DG 6 "O3'" ? ? ? 1_555 D S02 7 P ? ? D DG 306 D S02 307 1_555 ? ? ? ? ? ? ? 1.597 ? ?
covale16 covale one ? D S02 7 "O3'" ? ? ? 1_555 D DC 8 P ? ? D S02 307 D DC 309 1_555 ? ? ? ? ? ? ? 1.606 ? ?
hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 13 N3 ? ? A DG 1 A DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 13 O2 ? ? A DG 1 A DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 13 N4 ? ? A DG 1 A DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A BRU 2 N3 ? ? ? 1_555 A DA 12 N1 ? ? A BRU 2 A DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A BRU 2 O4 ? ? ? 1_555 A DA 12 N6 ? ? A BRU 2 A DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 11 N1 ? ? A DT 3 A DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 11 N6 ? ? A DT 3 A DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 10 N1 ? ? A DT 4 A DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 10 N6 ? ? A DT 4 A DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 A DA 9 N1 ? ? A DT 5 A DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 A DA 9 N6 ? ? A DT 5 A DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 6 A DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 6 A DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 6 A DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? B DG 1 N1 ? ? ? 1_555 B DC 13 N3 ? ? B DG 101 B DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? B DG 1 N2 ? ? ? 1_555 B DC 13 O2 ? ? B DG 101 B DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DC 13 N4 ? ? B DG 101 B DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? B BRU 2 O4 ? ? ? 1_555 B DA 11 N6 ? ? B BRU 102 B DA 112 1_555 ? ? ? ? ? ? 'BRU-DA PAIR' ? ? ?
hydrog19 hydrog ? ? B BRU 2 N3 ? ? ? 1_555 B DA 12 N1 ? ? B BRU 102 B DA 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? B BRU 2 O4 ? ? ? 1_555 B DA 12 N6 ? ? B BRU 102 B DA 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? B DT 3 N3 ? ? ? 1_555 B DA 11 N1 ? ? B DT 103 B DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? B DT 3 O4 ? ? ? 1_555 B DA 11 N6 ? ? B DT 103 B DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? B DT 4 N3 ? ? ? 1_555 B DA 10 N1 ? ? B DT 104 B DA 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? B DT 4 O4 ? ? ? 1_555 B DA 10 N6 ? ? B DT 104 B DA 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? B DT 5 N3 ? ? ? 1_555 B DA 9 N1 ? ? B DT 105 B DA 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? B DT 5 O4 ? ? ? 1_555 B DA 9 N6 ? ? B DT 105 B DA 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog27 hydrog ? ? B DG 6 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 106 B DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog28 hydrog ? ? B DG 6 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 106 B DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog29 hydrog ? ? B DG 6 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 106 B DC 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog30 hydrog ? ? C DG 1 N1 ? ? ? 1_555 C DC 13 N3 ? ? C DG 201 C DC 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog31 hydrog ? ? C DG 1 N2 ? ? ? 1_555 C DC 13 O2 ? ? C DG 201 C DC 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog32 hydrog ? ? C DG 1 O6 ? ? ? 1_555 C DC 13 N4 ? ? C DG 201 C DC 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog33 hydrog ? ? C BRU 2 N3 ? ? ? 1_555 C DA 12 N1 ? ? C BRU 202 C DA 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog34 hydrog ? ? C BRU 2 O4 ? ? ? 1_555 C DA 12 N6 ? ? C BRU 202 C DA 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog35 hydrog ? ? C DT 3 N3 ? ? ? 1_555 C DA 11 N1 ? ? C DT 203 C DA 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog36 hydrog ? ? C DT 3 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 203 C DA 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog37 hydrog ? ? C DT 4 N3 ? ? ? 1_555 C DA 10 N1 ? ? C DT 204 C DA 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog38 hydrog ? ? C DT 4 O4 ? ? ? 1_555 C DA 10 N6 ? ? C DT 204 C DA 211 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog39 hydrog ? ? C DT 5 O4 ? ? ? 1_555 C DC 8 N4 ? ? C DT 205 C DC 209 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ?
hydrog40 hydrog ? ? C DT 5 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 205 C DA 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog41 hydrog ? ? C DT 5 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 205 C DA 210 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog42 hydrog ? ? C DG 6 N1 ? ? ? 1_555 C DC 8 N3 ? ? C DG 206 C DC 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog43 hydrog ? ? C DG 6 N2 ? ? ? 1_555 C DC 8 O2 ? ? C DG 206 C DC 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog44 hydrog ? ? C DG 6 O6 ? ? ? 1_555 C DC 8 N4 ? ? C DG 206 C DC 209 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog45 hydrog ? ? D DG 1 N1 ? ? ? 1_555 D DC 13 N3 ? ? D DG 301 D DC 314 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog46 hydrog ? ? D DG 1 N2 ? ? ? 1_555 D DC 13 O2 ? ? D DG 301 D DC 314 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog47 hydrog ? ? D DG 1 O6 ? ? ? 1_555 D DC 13 N4 ? ? D DG 301 D DC 314 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog48 hydrog ? ? D BRU 2 N3 ? ? ? 1_555 D DA 12 N1 ? ? D BRU 302 D DA 313 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog49 hydrog ? ? D BRU 2 O4 ? ? ? 1_555 D DA 12 N6 ? ? D BRU 302 D DA 313 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog50 hydrog ? ? D DT 3 N3 ? ? ? 1_555 D DA 11 N1 ? ? D DT 303 D DA 312 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog51 hydrog ? ? D DT 3 O4 ? ? ? 1_555 D DA 11 N6 ? ? D DT 303 D DA 312 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog52 hydrog ? ? D DT 4 N3 ? ? ? 1_555 D DA 10 N1 ? ? D DT 304 D DA 311 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog53 hydrog ? ? D DT 4 O4 ? ? ? 1_555 D DA 10 N6 ? ? D DT 304 D DA 311 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog54 hydrog ? ? D DT 5 N3 ? ? ? 1_555 D DA 9 N1 ? ? D DT 305 D DA 310 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog55 hydrog ? ? D DT 5 O4 ? ? ? 1_555 D DA 9 N6 ? ? D DT 305 D DA 310 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog56 hydrog ? ? D DG 6 N1 ? ? ? 1_555 D DC 8 N3 ? ? D DG 306 D DC 309 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog57 hydrog ? ? D DG 6 N2 ? ? ? 1_555 D DC 8 O2 ? ? D DG 306 D DC 309 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog58 hydrog ? ? D DG 6 O6 ? ? ? 1_555 D DC 8 N4 ? ? D DG 306 D DC 309 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
hydrog ? ?
#
_struct_site.id 1
_struct_site.pdbx_evidence_code ?
_struct_site.pdbx_auth_asym_id ?
_struct_site.pdbx_auth_comp_id ?
_struct_site.pdbx_auth_seq_id ?
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues ?
_struct_site.details ?
#
_pdbx_validate_rmsd_angle.id 1
_pdbx_validate_rmsd_angle.PDB_model_num 1
_pdbx_validate_rmsd_angle.auth_atom_id_1 "C5'"
_pdbx_validate_rmsd_angle.auth_asym_id_1 A
_pdbx_validate_rmsd_angle.auth_comp_id_1 DA
_pdbx_validate_rmsd_angle.auth_seq_id_1 13
_pdbx_validate_rmsd_angle.PDB_ins_code_1 ?
_pdbx_validate_rmsd_angle.label_alt_id_1 ?
_pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'"
_pdbx_validate_rmsd_angle.auth_asym_id_2 A
_pdbx_validate_rmsd_angle.auth_comp_id_2 DA
_pdbx_validate_rmsd_angle.auth_seq_id_2 13
_pdbx_validate_rmsd_angle.PDB_ins_code_2 ?
_pdbx_validate_rmsd_angle.label_alt_id_2 ?
_pdbx_validate_rmsd_angle.auth_atom_id_3 "O4'"
_pdbx_validate_rmsd_angle.auth_asym_id_3 A
_pdbx_validate_rmsd_angle.auth_comp_id_3 DA
_pdbx_validate_rmsd_angle.auth_seq_id_3 13
_pdbx_validate_rmsd_angle.PDB_ins_code_3 ?
_pdbx_validate_rmsd_angle.label_alt_id_3 ?
_pdbx_validate_rmsd_angle.angle_value 118.98
_pdbx_validate_rmsd_angle.angle_target_value 109.80
_pdbx_validate_rmsd_angle.angle_deviation 9.18
_pdbx_validate_rmsd_angle.angle_standard_deviation 1.10
_pdbx_validate_rmsd_angle.linker_flag N
#
loop_
_pdbx_validate_chiral.id
_pdbx_validate_chiral.PDB_model_num
_pdbx_validate_chiral.auth_atom_id
_pdbx_validate_chiral.label_alt_id
_pdbx_validate_chiral.auth_asym_id
_pdbx_validate_chiral.auth_comp_id
_pdbx_validate_chiral.auth_seq_id
_pdbx_validate_chiral.PDB_ins_code
_pdbx_validate_chiral.details
_pdbx_validate_chiral.omega
1 1 C4A ? A S02 7 ? PLANAR .
2 1 C4B ? A S02 7 ? PLANAR .
3 1 C4A ? B S02 107 ? PLANAR .
4 1 C4B ? B S02 107 ? PLANAR .
5 1 C4A ? C S02 207 ? PLANAR .
6 1 C4B ? C S02 207 ? PLANAR .
7 1 C4A ? D S02 307 ? PLANAR .
8 1 C4B ? D S02 307 ? PLANAR .
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A BRU 2 A BRU 2 ? DU ?
2 B BRU 2 B BRU 102 ? DU ?
3 C BRU 2 C BRU 202 ? DU ?
4 D BRU 2 D BRU 302 ? DU ?
#
_struct_site_keywords.site_id 1
_struct_site_keywords.text COVALENT
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
BRU N1 N N N 1
BRU C2 C N N 2
BRU N3 N N N 3
BRU C4 C N N 4
BRU C5 C N N 5
BRU C6 C N N 6
BRU O2 O N N 7
BRU O4 O N N 8
BRU BR BR N N 9
BRU "C1'" C N R 10
BRU "C2'" C N N 11
BRU "C3'" C N S 12
BRU "C4'" C N R 13
BRU "O3'" O N N 14
BRU "O4'" O N N 15
BRU "C5'" C N N 16
BRU "O5'" O N N 17
BRU P P N N 18
BRU OP1 O N N 19
BRU OP2 O N N 20
BRU OP3 O N N 21
BRU HN3 H N N 22
BRU H6 H N N 23
BRU "H1'" H N N 24
BRU "H2'" H N N 25
BRU "H2''" H N N 26
BRU "H3'" H N N 27
BRU "H4'" H N N 28
BRU "HO3'" H N N 29
BRU "H5'" H N N 30
BRU "H5''" H N N 31
BRU HOP2 H N N 32
BRU HOP3 H N N 33
DA OP3 O N N 34
DA P P N N 35
DA OP1 O N N 36
DA OP2 O N N 37
DA "O5'" O N N 38
DA "C5'" C N N 39
DA "C4'" C N R 40
DA "O4'" O N N 41
DA "C3'" C N S 42
DA "O3'" O N N 43
DA "C2'" C N N 44
DA "C1'" C N R 45
DA N9 N Y N 46
DA C8 C Y N 47
DA N7 N Y N 48
DA C5 C Y N 49
DA C6 C Y N 50
DA N6 N N N 51
DA N1 N Y N 52
DA C2 C Y N 53
DA N3 N Y N 54
DA C4 C Y N 55
DA HOP3 H N N 56
DA HOP2 H N N 57
DA "H5'" H N N 58
DA "H5''" H N N 59
DA "H4'" H N N 60
DA "H3'" H N N 61
DA "HO3'" H N N 62
DA "H2'" H N N 63
DA "H2''" H N N 64
DA "H1'" H N N 65
DA H8 H N N 66
DA H61 H N N 67
DA H62 H N N 68
DA H2 H N N 69
DC OP3 O N N 70
DC P P N N 71
DC OP1 O N N 72
DC OP2 O N N 73
DC "O5'" O N N 74
DC "C5'" C N N 75
DC "C4'" C N R 76
DC "O4'" O N N 77
DC "C3'" C N S 78
DC "O3'" O N N 79
DC "C2'" C N N 80
DC "C1'" C N R 81
DC N1 N N N 82
DC C2 C N N 83
DC O2 O N N 84
DC N3 N N N 85
DC C4 C N N 86
DC N4 N N N 87
DC C5 C N N 88
DC C6 C N N 89
DC HOP3 H N N 90
DC HOP2 H N N 91
DC "H5'" H N N 92
DC "H5''" H N N 93
DC "H4'" H N N 94
DC "H3'" H N N 95
DC "HO3'" H N N 96
DC "H2'" H N N 97
DC "H2''" H N N 98
DC "H1'" H N N 99
DC H41 H N N 100
DC H42 H N N 101
DC H5 H N N 102
DC H6 H N N 103
DG OP3 O N N 104
DG P P N N 105
DG OP1 O N N 106
DG OP2 O N N 107
DG "O5'" O N N 108
DG "C5'" C N N 109
DG "C4'" C N R 110
DG "O4'" O N N 111
DG "C3'" C N S 112
DG "O3'" O N N 113
DG "C2'" C N N 114
DG "C1'" C N R 115
DG N9 N Y N 116
DG C8 C Y N 117
DG N7 N Y N 118
DG C5 C Y N 119
DG C6 C N N 120
DG O6 O N N 121
DG N1 N N N 122
DG C2 C N N 123
DG N2 N N N 124
DG N3 N N N 125
DG C4 C Y N 126
DG HOP3 H N N 127
DG HOP2 H N N 128
DG "H5'" H N N 129
DG "H5''" H N N 130
DG "H4'" H N N 131
DG "H3'" H N N 132
DG "HO3'" H N N 133
DG "H2'" H N N 134
DG "H2''" H N N 135
DG "H1'" H N N 136
DG H8 H N N 137
DG H1 H N N 138
DG H21 H N N 139
DG H22 H N N 140
DT OP3 O N N 141
DT P P N N 142
DT OP1 O N N 143
DT OP2 O N N 144
DT "O5'" O N N 145
DT "C5'" C N N 146
DT "C4'" C N R 147
DT "O4'" O N N 148
DT "C3'" C N S 149
DT "O3'" O N N 150
DT "C2'" C N N 151
DT "C1'" C N R 152
DT N1 N N N 153
DT C2 C N N 154
DT O2 O N N 155
DT N3 N N N 156
DT C4 C N N 157
DT O4 O N N 158
DT C5 C N N 159
DT C7 C N N 160
DT C6 C N N 161
DT HOP3 H N N 162
DT HOP2 H N N 163
DT "H5'" H N N 164
DT "H5''" H N N 165
DT "H4'" H N N 166
DT "H3'" H N N 167
DT "HO3'" H N N 168
DT "H2'" H N N 169
DT "H2''" H N N 170
DT "H1'" H N N 171
DT H3 H N N 172
DT H71 H N N 173
DT H72 H N N 174
DT H73 H N N 175
DT H6 H N N 176
HOH O O N N 177
HOH H1 H N N 178
HOH H2 H N N 179
S02 P P N N 180
S02 O1P O N N 181
S02 O2P O N N 182
S02 O3P O N N 183
S02 "O5'" O N N 184
S02 "C5'" C N N 185
S02 "CA'" C N N 186
S02 "OB'" O N N 187
S02 C1A C N N 188
S02 C6A C N N 189
S02 C2A C N N 190
S02 C3A C N N 191
S02 C4A C N R 192
S02 C7A C N N 193
S02 C5A C N N 194
S02 C1B C N N 195
S02 C6B C N N 196
S02 C2B C N N 197
S02 C3B C N N 198
S02 C4B C N R 199
S02 C7B C N N 200
S02 C5B C N N 201
S02 "OC'" O N N 202
S02 "CD'" C N N 203
S02 "C3'" C N N 204
S02 "O3'" O N N 205
S02 HOP2 H N N 206
S02 HOP3 H N N 207
S02 "H5'1" H N N 208
S02 "H5'2" H N N 209
S02 HA1 H N N 210
S02 HA2 H N N 211
S02 H1A H N N 212
S02 H6A1 H N N 213
S02 H6A2 H N N 214
S02 H2A1 H N N 215
S02 H2A2 H N N 216
S02 H3A1 H N N 217
S02 H3A2 H N N 218
S02 H7A H N N 219
S02 H5A1 H N N 220
S02 H5A2 H N N 221
S02 H1B H N N 222
S02 H6B1 H N N 223
S02 H6B2 H N N 224
S02 H2B1 H N N 225
S02 H2B2 H N N 226
S02 H3B1 H N N 227
S02 H3B2 H N N 228
S02 H7B H N N 229
S02 H5B1 H N N 230
S02 H5B2 H N N 231
S02 "HD'1" H N N 232
S02 "HD'2" H N N 233
S02 "H3'1" H N N 234
S02 "H3'2" H N N 235
S02 "HO3'" H N N 236
SR SR SR N N 237
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BRU N1 C2 sing N N 1
BRU N1 C6 sing N N 2
BRU N1 "C1'" sing N N 3
BRU C2 N3 sing N N 4
BRU C2 O2 doub N N 5
BRU N3 C4 sing N N 6
BRU N3 HN3 sing N N 7
BRU C4 C5 sing N N 8
BRU C4 O4 doub N N 9
BRU C5 C6 doub N N 10
BRU C5 BR sing N N 11
BRU C6 H6 sing N N 12
BRU "C1'" "C2'" sing N N 13
BRU "C1'" "O4'" sing N N 14
BRU "C1'" "H1'" sing N N 15
BRU "C2'" "C3'" sing N N 16
BRU "C2'" "H2'" sing N N 17
BRU "C2'" "H2''" sing N N 18
BRU "C3'" "C4'" sing N N 19
BRU "C3'" "O3'" sing N N 20
BRU "C3'" "H3'" sing N N 21
BRU "C4'" "O4'" sing N N 22
BRU "C4'" "C5'" sing N N 23
BRU "C4'" "H4'" sing N N 24
BRU "O3'" "HO3'" sing N N 25
BRU "C5'" "O5'" sing N N 26
BRU "C5'" "H5'" sing N N 27
BRU "C5'" "H5''" sing N N 28
BRU "O5'" P sing N N 29
BRU P OP1 doub N N 30
BRU P OP2 sing N N 31
BRU P OP3 sing N N 32
BRU OP2 HOP2 sing N N 33
BRU OP3 HOP3 sing N N 34
DA OP3 P sing N N 35
DA OP3 HOP3 sing N N 36
DA P OP1 doub N N 37
DA P OP2 sing N N 38
DA P "O5'" sing N N 39
DA OP2 HOP2 sing N N 40
DA "O5'" "C5'" sing N N 41
DA "C5'" "C4'" sing N N 42
DA "C5'" "H5'" sing N N 43
DA "C5'" "H5''" sing N N 44
DA "C4'" "O4'" sing N N 45
DA "C4'" "C3'" sing N N 46
DA "C4'" "H4'" sing N N 47
DA "O4'" "C1'" sing N N 48
DA "C3'" "O3'" sing N N 49
DA "C3'" "C2'" sing N N 50
DA "C3'" "H3'" sing N N 51
DA "O3'" "HO3'" sing N N 52
DA "C2'" "C1'" sing N N 53
DA "C2'" "H2'" sing N N 54
DA "C2'" "H2''" sing N N 55
DA "C1'" N9 sing N N 56
DA "C1'" "H1'" sing N N 57
DA N9 C8 sing Y N 58
DA N9 C4 sing Y N 59
DA C8 N7 doub Y N 60
DA C8 H8 sing N N 61
DA N7 C5 sing Y N 62
DA C5 C6 sing Y N 63
DA C5 C4 doub Y N 64
DA C6 N6 sing N N 65
DA C6 N1 doub Y N 66
DA N6 H61 sing N N 67
DA N6 H62 sing N N 68
DA N1 C2 sing Y N 69
DA C2 N3 doub Y N 70
DA C2 H2 sing N N 71
DA N3 C4 sing Y N 72
DC OP3 P sing N N 73
DC OP3 HOP3 sing N N 74
DC P OP1 doub N N 75
DC P OP2 sing N N 76
DC P "O5'" sing N N 77
DC OP2 HOP2 sing N N 78
DC "O5'" "C5'" sing N N 79
DC "C5'" "C4'" sing N N 80
DC "C5'" "H5'" sing N N 81
DC "C5'" "H5''" sing N N 82
DC "C4'" "O4'" sing N N 83
DC "C4'" "C3'" sing N N 84
DC "C4'" "H4'" sing N N 85
DC "O4'" "C1'" sing N N 86
DC "C3'" "O3'" sing N N 87
DC "C3'" "C2'" sing N N 88
DC "C3'" "H3'" sing N N 89
DC "O3'" "HO3'" sing N N 90
DC "C2'" "C1'" sing N N 91
DC "C2'" "H2'" sing N N 92
DC "C2'" "H2''" sing N N 93
DC "C1'" N1 sing N N 94
DC "C1'" "H1'" sing N N 95
DC N1 C2 sing N N 96
DC N1 C6 sing N N 97
DC C2 O2 doub N N 98
DC C2 N3 sing N N 99
DC N3 C4 doub N N 100
DC C4 N4 sing N N 101
DC C4 C5 sing N N 102
DC N4 H41 sing N N 103
DC N4 H42 sing N N 104
DC C5 C6 doub N N 105
DC C5 H5 sing N N 106
DC C6 H6 sing N N 107
DG OP3 P sing N N 108
DG OP3 HOP3 sing N N 109
DG P OP1 doub N N 110
DG P OP2 sing N N 111
DG P "O5'" sing N N 112
DG OP2 HOP2 sing N N 113
DG "O5'" "C5'" sing N N 114
DG "C5'" "C4'" sing N N 115
DG "C5'" "H5'" sing N N 116
DG "C5'" "H5''" sing N N 117
DG "C4'" "O4'" sing N N 118
DG "C4'" "C3'" sing N N 119
DG "C4'" "H4'" sing N N 120
DG "O4'" "C1'" sing N N 121
DG "C3'" "O3'" sing N N 122
DG "C3'" "C2'" sing N N 123
DG "C3'" "H3'" sing N N 124
DG "O3'" "HO3'" sing N N 125
DG "C2'" "C1'" sing N N 126
DG "C2'" "H2'" sing N N 127
DG "C2'" "H2''" sing N N 128
DG "C1'" N9 sing N N 129
DG "C1'" "H1'" sing N N 130
DG N9 C8 sing Y N 131
DG N9 C4 sing Y N 132
DG C8 N7 doub Y N 133
DG C8 H8 sing N N 134
DG N7 C5 sing Y N 135
DG C5 C6 sing N N 136
DG C5 C4 doub Y N 137
DG C6 O6 doub N N 138
DG C6 N1 sing N N 139
DG N1 C2 sing N N 140
DG N1 H1 sing N N 141
DG C2 N2 sing N N 142
DG C2 N3 doub N N 143
DG N2 H21 sing N N 144
DG N2 H22 sing N N 145
DG N3 C4 sing N N 146
DT OP3 P sing N N 147
DT OP3 HOP3 sing N N 148
DT P OP1 doub N N 149
DT P OP2 sing N N 150
DT P "O5'" sing N N 151
DT OP2 HOP2 sing N N 152
DT "O5'" "C5'" sing N N 153
DT "C5'" "C4'" sing N N 154
DT "C5'" "H5'" sing N N 155
DT "C5'" "H5''" sing N N 156
DT "C4'" "O4'" sing N N 157
DT "C4'" "C3'" sing N N 158
DT "C4'" "H4'" sing N N 159
DT "O4'" "C1'" sing N N 160
DT "C3'" "O3'" sing N N 161
DT "C3'" "C2'" sing N N 162
DT "C3'" "H3'" sing N N 163
DT "O3'" "HO3'" sing N N 164
DT "C2'" "C1'" sing N N 165
DT "C2'" "H2'" sing N N 166
DT "C2'" "H2''" sing N N 167
DT "C1'" N1 sing N N 168
DT "C1'" "H1'" sing N N 169
DT N1 C2 sing N N 170
DT N1 C6 sing N N 171
DT C2 O2 doub N N 172
DT C2 N3 sing N N 173
DT N3 C4 sing N N 174
DT N3 H3 sing N N 175
DT C4 O4 doub N N 176
DT C4 C5 sing N N 177
DT C5 C7 sing N N 178
DT C5 C6 doub N N 179
DT C7 H71 sing N N 180
DT C7 H72 sing N N 181
DT C7 H73 sing N N 182
DT C6 H6 sing N N 183
HOH O H1 sing N N 184
HOH O H2 sing N N 185
S02 P O1P doub N N 186
S02 P O2P sing N N 187
S02 P O3P sing N N 188
S02 P "O5'" sing N N 189
S02 O2P HOP2 sing N N 190
S02 O3P HOP3 sing N N 191
S02 "O5'" "C5'" sing N N 192
S02 "C5'" "CA'" sing N N 193
S02 "C5'" "H5'1" sing N N 194
S02 "C5'" "H5'2" sing N N 195
S02 "CA'" "OB'" sing N N 196
S02 "CA'" HA1 sing N N 197
S02 "CA'" HA2 sing N N 198
S02 "OB'" C1A sing N N 199
S02 C1A C6A sing N N 200
S02 C1A C2A sing N N 201
S02 C1A H1A sing N N 202
S02 C6A C5A sing N N 203
S02 C6A H6A1 sing N N 204
S02 C6A H6A2 sing N N 205
S02 C2A C3A sing N N 206
S02 C2A H2A1 sing N N 207
S02 C2A H2A2 sing N N 208
S02 C3A C4A sing N N 209
S02 C3A H3A1 sing N N 210
S02 C3A H3A2 sing N N 211
S02 C4A C7A doub N N 212
S02 C4A C5A sing N N 213
S02 C7A C7B sing N N 214
S02 C7A H7A sing N N 215
S02 C5A H5A1 sing N N 216
S02 C5A H5A2 sing N N 217
S02 C1B C6B sing N N 218
S02 C1B C2B sing N N 219
S02 C1B "OC'" sing N N 220
S02 C1B H1B sing N N 221
S02 C6B C5B sing N N 222
S02 C6B H6B1 sing N N 223
S02 C6B H6B2 sing N N 224
S02 C2B C3B sing N N 225
S02 C2B H2B1 sing N N 226
S02 C2B H2B2 sing N N 227
S02 C3B C4B sing N N 228
S02 C3B H3B1 sing N N 229
S02 C3B H3B2 sing N N 230
S02 C4B C7B doub N N 231
S02 C4B C5B sing N N 232
S02 C7B H7B sing N N 233
S02 C5B H5B1 sing N N 234
S02 C5B H5B2 sing N N 235
S02 "OC'" "CD'" sing N N 236
S02 "CD'" "C3'" sing N N 237
S02 "CD'" "HD'1" sing N N 238
S02 "CD'" "HD'2" sing N N 239
S02 "C3'" "O3'" sing N N 240
S02 "C3'" "H3'1" sing N N 241
S02 "C3'" "H3'2" sing N N 242
S02 "O3'" "HO3'" sing N N 243
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
1CS7 'double helix'
1CS7 'b-form double helix'
1CS7 'hairpin loop'
1CS7 'mismatched base pair'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DG 1 1_555 A DC 13 1_555 -0.161 -0.070 -0.054 5.042 -7.993 0.444 1 A_DG1:DC14_A A 1 ? A 14 ? 19 1
1 A BRU 2 1_555 A DA 12 1_555 0.009 -0.135 0.517 -3.341 -14.300 -1.018 2 A_BRU2:DA13_A A 2 ? A 13 ? 20 1
1 A DT 3 1_555 A DA 11 1_555 -0.066 -0.143 0.729 -4.768 -6.098 -2.024 3 A_DT3:DA12_A A 3 ? A 12 ? 20 1
1 A DT 4 1_555 A DA 10 1_555 -0.088 -0.088 -0.040 -3.860 -13.531 -1.078 4 A_DT4:DA11_A A 4 ? A 11 ? 20 1
1 A DT 5 1_555 A DA 9 1_555 -0.020 -0.146 0.366 -8.223 -10.197 3.516 5 A_DT5:DA10_A A 5 ? A 10 ? 20 1
1 A DG 6 1_555 A DC 8 1_555 -0.158 -0.083 0.670 14.224 0.105 0.062 6 A_DG6:DC9_A A 6 ? A 9 ? 19 1
1 B DG 1 1_555 B DC 13 1_555 -0.144 -0.046 -0.178 -9.084 -5.160 -1.301 7 B_DG101:DC114_B B 101 ? B 114 ? 19 1
1 B BRU 2 1_555 B DA 12 1_555 -0.144 -0.095 0.664 -15.916 -18.051 -3.980 8 B_BRU102:DA113_B B 102 ? B 113 ? 20 1
1 B DT 3 1_555 B DA 11 1_555 -0.142 -0.088 0.398 -6.568 -23.690 -3.686 9 B_DT103:DA112_B B 103 ? B 112 ? 20 1
1 B DT 4 1_555 B DA 10 1_555 -0.104 -0.022 0.012 -4.499 -13.375 -2.482 10 B_DT104:DA111_B B 104 ? B 111 ? 20 1
1 B DT 5 1_555 B DA 9 1_555 -0.067 -0.099 -0.127 -10.138 -11.096 2.601 11 B_DT105:DA110_B B 105 ? B 110 ? 20 1
1 B DG 6 1_555 B DC 8 1_555 -0.117 -0.075 -0.053 6.209 2.143 -1.548 12 B_DG106:DC109_B B 106 ? B 109 ? 19 1
1 C DG 1 1_555 C DC 13 1_555 -0.162 -0.078 0.253 0.985 -6.738 -0.298 13 C_DG201:DC214_C C 201 ? C 214 ? 19 1
1 C BRU 2 1_555 C DA 12 1_555 -0.114 -0.037 0.574 -5.830 -9.938 -4.465 14 C_BRU202:DA213_C C 202 ? C 213 ? 20 1
1 C DT 3 1_555 C DA 11 1_555 -0.081 -0.112 0.192 -5.383 -18.709 1.618 15 C_DT203:DA212_C C 203 ? C 212 ? 20 1
1 C DT 4 1_555 C DA 10 1_555 -0.121 -0.192 0.824 -13.407 -15.180 -3.866 16 C_DT204:DA211_C C 204 ? C 211 ? 20 1
1 C DT 5 1_555 C DA 9 1_555 -0.031 -0.161 0.630 -16.416 -7.365 6.417 17 C_DT205:DA210_C C 205 ? C 210 ? 20 1
1 C DG 6 1_555 C DC 8 1_555 -0.093 -0.164 0.854 14.864 5.705 -3.692 18 C_DG206:DC209_C C 206 ? C 209 ? 19 1
1 D DG 1 1_555 D DC 13 1_555 -0.169 -0.042 -0.380 -4.282 -10.841 2.849 19 D_DG301:DC314_D D 301 ? D 314 ? 19 1
1 D BRU 2 1_555 D DA 12 1_555 0.040 -0.111 0.459 -8.273 -14.807 3.737 20 D_BRU302:DA313_D D 302 ? D 313 ? 20 1
1 D DT 3 1_555 D DA 11 1_555 -0.081 -0.099 0.384 -5.433 -17.807 2.029 21 D_DT303:DA312_D D 303 ? D 312 ? 20 1
1 D DT 4 1_555 D DA 10 1_555 -0.186 -0.060 0.377 -7.053 -12.855 -3.824 22 D_DT304:DA311_D D 304 ? D 311 ? 20 1
1 D DT 5 1_555 D DA 9 1_555 -0.011 -0.092 0.179 7.755 -15.217 -0.009 23 D_DT305:DA310_D D 305 ? D 310 ? 20 1
1 D DG 6 1_555 D DC 8 1_555 -0.081 -0.057 0.558 12.706 -9.561 -3.205 24 D_DG306:DC309_D D 306 ? D 309 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DG 1 1_555 A DC 13 1_555 A BRU 2 1_555 A DA 12 1_555 -0.420 -1.008 3.470 -3.732 -2.638 32.675 -1.292 0.055 3.563 -4.661
6.594 32.984 1 AA_DG1BRU2:DA13DC14_AA A 1 ? A 14 ? A 2 ? A 13 ?
1 A BRU 2 1_555 A DA 12 1_555 A DT 3 1_555 A DA 11 1_555 0.039 -0.787 3.276 -4.236 -6.612 36.634 -0.338 -0.629 3.338 -10.373
6.645 37.438 2 AA_BRU2DT3:DA12DA13_AA A 2 ? A 13 ? A 3 ? A 12 ?
1 A DT 3 1_555 A DA 11 1_555 A DT 4 1_555 A DA 10 1_555 -0.122 -0.107 2.947 8.544 -7.679 43.890 0.477 0.843 2.856 -10.070
-11.204 45.297 3 AA_DT3DT4:DA11DA12_AA A 3 ? A 12 ? A 4 ? A 11 ?
1 A DT 4 1_555 A DA 10 1_555 A DT 5 1_555 A DA 9 1_555 0.316 -0.249 3.397 -0.611 0.109 33.734 -0.448 -0.648 3.390 0.189
1.052 33.739 4 AA_DT4DT5:DA10DA11_AA A 4 ? A 11 ? A 5 ? A 10 ?
1 A DT 5 1_555 A DA 9 1_555 A DG 6 1_555 A DC 8 1_555 0.399 0.667 3.137 -3.685 3.156 35.368 0.650 -1.164 3.127 5.165
6.031 35.689 5 AA_DT5DG6:DC9DA10_AA A 5 ? A 10 ? A 6 ? A 9 ?
1 B DG 1 1_555 B DC 13 1_555 B BRU 2 1_555 B DA 12 1_555 -0.653 -0.914 3.393 -6.230 1.847 32.827 -1.909 0.056 3.401 3.229
10.890 33.446 6 BB_DG101BRU102:DA113DC114_BB B 101 ? B 114 ? B 102 ? B 113 ?
1 B BRU 2 1_555 B DA 12 1_555 B DT 3 1_555 B DA 11 1_555 -0.406 -0.696 2.892 -0.944 -10.649 38.127 0.116 0.499 2.983 -15.923
1.412 39.544 7 BB_BRU102DT103:DA112DA113_BB B 102 ? B 113 ? B 103 ? B 112 ?
1 B DT 3 1_555 B DA 11 1_555 B DT 4 1_555 B DA 10 1_555 0.474 -0.100 2.978 4.679 -6.743 44.043 0.435 -0.230 2.994 -8.900
-6.176 44.764 8 BB_DT103DT104:DA111DA112_BB B 103 ? B 112 ? B 104 ? B 111 ?
1 B DT 4 1_555 B DA 10 1_555 B DT 5 1_555 B DA 9 1_555 0.405 0.339 3.443 4.690 2.390 33.151 0.170 0.119 3.481 4.156
-8.156 33.555 9 BB_DT104DT105:DA110DA111_BB B 104 ? B 111 ? B 105 ? B 110 ?
1 B DT 5 1_555 B DA 9 1_555 B DG 6 1_555 B DC 8 1_555 0.288 1.245 3.463 -1.141 3.613 31.779 1.555 -0.745 3.566 6.569
2.075 31.998 10 BB_DT105DG106:DC109DA110_BB B 105 ? B 110 ? B 106 ? B 109 ?
1 C DG 1 1_555 C DC 13 1_555 C BRU 2 1_555 C DA 12 1_555 -0.276 -1.143 3.418 -1.636 -2.485 33.947 -1.532 0.195 3.499 -4.245
2.795 34.073 11 CC_DG201BRU202:DA213DC214_CC C 201 ? C 214 ? C 202 ? C 213 ?
1 C BRU 2 1_555 C DA 12 1_555 C DT 3 1_555 C DA 11 1_555 -0.035 -0.418 3.081 4.366 -3.435 35.797 -0.214 0.638 3.082 -5.548
-7.050 36.211 12 CC_BRU202DT203:DA212DA213_CC C 202 ? C 213 ? C 203 ? C 212 ?
1 C DT 3 1_555 C DA 11 1_555 C DT 4 1_555 C DA 10 1_555 -0.138 -0.344 3.355 -7.114 -2.833 42.529 -0.181 -0.533 3.350 -3.868
9.713 43.181 13 CC_DT203DT204:DA211DA212_CC C 203 ? C 212 ? C 204 ? C 211 ?
1 C DT 4 1_555 C DA 10 1_555 C DT 5 1_555 C DA 9 1_555 0.412 -0.276 3.400 3.722 -6.875 35.886 0.553 -0.118 3.417 -10.998
-5.954 36.701 14 CC_DT204DT205:DA210DA211_CC C 204 ? C 211 ? C 205 ? C 210 ?
1 C DT 5 1_555 C DA 9 1_555 C DG 6 1_555 C DC 8 1_555 -0.224 0.780 2.811 -5.686 5.121 31.104 0.596 -0.503 2.894 9.373
10.408 32.009 15 CC_DT205DG206:DC209DA210_CC C 205 ? C 210 ? C 206 ? C 209 ?
1 D DG 1 1_555 D DC 13 1_555 D BRU 2 1_555 D DA 12 1_555 -0.206 -0.923 3.312 -6.248 -1.499 33.653 -1.326 -0.658 3.332 -2.560
10.671 34.244 16 DD_DG301BRU302:DA313DC314_DD D 301 ? D 314 ? D 302 ? D 313 ?
1 D BRU 2 1_555 D DA 12 1_555 D DT 3 1_555 D DA 11 1_555 -0.502 -0.584 3.073 1.087 -5.034 40.029 -0.309 0.844 3.107 -7.317
-1.580 40.345 17 DD_BRU302DT303:DA312DA313_DD D 302 ? D 313 ? D 303 ? D 312 ?
1 D DT 3 1_555 D DA 11 1_555 D DT 4 1_555 D DA 10 1_555 0.172 -0.106 3.127 0.655 -4.958 40.812 0.364 -0.177 3.120 -7.077
-0.935 41.104 18 DD_DT303DT304:DA311DA312_DD D 303 ? D 312 ? D 304 ? D 311 ?
1 D DT 4 1_555 D DA 10 1_555 D DT 5 1_555 D DA 9 1_555 0.448 -0.227 2.964 4.891 -8.072 34.863 0.690 -0.082 2.976 -13.177
-7.984 36.079 19 DD_DT304DT305:DA310DA311_DD D 304 ? D 311 ? D 305 ? D 310 ?
1 D DT 5 1_555 D DA 9 1_555 D DG 6 1_555 D DC 8 1_555 -0.132 0.690 3.395 -1.917 21.346 31.890 -1.934 -0.067 3.227 34.423
3.091 38.267 20 DD_DT305DG306:DC309DA310_DD D 305 ? D 310 ? D 306 ? D 309 ?
#
_atom_sites.entry_id 1CS7
_atom_sites.fract_transf_matrix[1][1] 0.036023
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.004295
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.014730
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.016288
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
BR
C
N
O
P
SR
#
loop_