data_1CW0 # _entry.id 1CW0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1CW0 pdb_00001cw0 10.2210/pdb1cw0/pdb NDB PD0100 ? ? RCSB RCSB009577 ? ? WWPDB D_1000009577 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1CW0 _pdbx_database_status.recvd_initial_deposition_date 1999-08-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tsutakawa, S.E.' 1 'Jingami, H.' 2 'Morikawa, K.' 3 # _citation.id primary _citation.title 'Recognition of a TG mismatch: the crystal structure of very short patch repair endonuclease in complex with a DNA duplex.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 99 _citation.page_first 615 _citation.page_last 623 _citation.year 1999 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10612397 _citation.pdbx_database_id_DOI '10.1016/S0092-8674(00)81550-0' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsutakawa, S.E.' 1 ? primary 'Jingami, H.' 2 ? primary 'Morikawa, K.' 3 ? # _cell.entry_id 1CW0 _cell.length_a 63.000 _cell.length_b 63.000 _cell.length_c 152.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CW0 _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting hexagonal _symmetry.Int_Tables_number 170 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*CP*GP*TP*AP*CP*CP*TP*GP*GP*CP*T)-3') ; 3638.379 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*C)-3') ; 886.637 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*TP*AP*GP*GP*TP*AP*CP*GP*T)-3') ; 2770.834 1 ? ? ? ? 4 polymer man 'PROTEIN (DNA MISMATCH ENDONUCLEASE)' 17914.473 1 3.1.-.- ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 7 water nat water 18.015 206 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name 'VSR ENDONUCLEASE, PATCH REPAIR PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DC)(DG)(DT)(DA)(DC)(DC)(DT)(DG)(DG)(DC)(DT)' ACGTACCTGGCT M ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DC)' AGC N ? 3 polydeoxyribonucleotide no no '(DT)(DA)(DG)(DG)(DT)(DA)(DC)(DG)(DT)' TAGGTACGT O ? 4 'polypeptide(L)' no no ;ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPAT RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA ; ;ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPAT RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 DC n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n 1 11 DC n 1 12 DT n 2 1 DA n 2 2 DG n 2 3 DC n 3 1 DT n 3 2 DA n 3 3 DG n 3 4 DG n 3 5 DT n 3 6 DA n 3 7 DC n 3 8 DG n 3 9 DT n 4 1 ALA n 4 2 ASP n 4 3 VAL n 4 4 HIS n 4 5 ASP n 4 6 LYS n 4 7 ALA n 4 8 THR n 4 9 ARG n 4 10 SER n 4 11 LYS n 4 12 ASN n 4 13 MET n 4 14 ARG n 4 15 ALA n 4 16 ILE n 4 17 ALA n 4 18 THR n 4 19 ARG n 4 20 ASP n 4 21 THR n 4 22 ALA n 4 23 ILE n 4 24 GLU n 4 25 LYS n 4 26 ARG n 4 27 LEU n 4 28 ALA n 4 29 SER n 4 30 LEU n 4 31 LEU n 4 32 THR n 4 33 GLY n 4 34 GLN n 4 35 GLY n 4 36 LEU n 4 37 ALA n 4 38 PHE n 4 39 ARG n 4 40 VAL n 4 41 GLN n 4 42 ASP n 4 43 ALA n 4 44 SER n 4 45 LEU n 4 46 PRO n 4 47 GLY n 4 48 ARG n 4 49 PRO n 4 50 ASP n 4 51 PHE n 4 52 VAL n 4 53 VAL n 4 54 ASP n 4 55 GLU n 4 56 TYR n 4 57 ARG n 4 58 CYS n 4 59 VAL n 4 60 ILE n 4 61 PHE n 4 62 THR n 4 63 HIS n 4 64 GLY n 4 65 CYS n 4 66 PHE n 4 67 TRP n 4 68 HIS n 4 69 HIS n 4 70 HIS n 4 71 HIS n 4 72 CYS n 4 73 TYR n 4 74 LEU n 4 75 PHE n 4 76 LYS n 4 77 VAL n 4 78 PRO n 4 79 ALA n 4 80 THR n 4 81 ARG n 4 82 THR n 4 83 GLU n 4 84 PHE n 4 85 TRP n 4 86 LEU n 4 87 GLU n 4 88 LYS n 4 89 ILE n 4 90 GLY n 4 91 LYS n 4 92 ASN n 4 93 VAL n 4 94 GLU n 4 95 ARG n 4 96 ASP n 4 97 ARG n 4 98 ARG n 4 99 ASP n 4 100 ILE n 4 101 SER n 4 102 ARG n 4 103 LEU n 4 104 GLN n 4 105 GLU n 4 106 LEU n 4 107 GLY n 4 108 TRP n 4 109 ARG n 4 110 VAL n 4 111 LEU n 4 112 ILE n 4 113 VAL n 4 114 TRP n 4 115 GLU n 4 116 CYS n 4 117 ALA n 4 118 LEU n 4 119 ARG n 4 120 GLY n 4 121 ARG n 4 122 GLU n 4 123 LYS n 4 124 LEU n 4 125 THR n 4 126 ASP n 4 127 GLU n 4 128 ALA n 4 129 LEU n 4 130 THR n 4 131 GLU n 4 132 ARG n 4 133 LEU n 4 134 GLU n 4 135 GLU n 4 136 TRP n 4 137 ILE n 4 138 CYS n 4 139 GLY n 4 140 GLU n 4 141 GLY n 4 142 ALA n 4 143 SER n 4 144 ALA n 4 145 GLN n 4 146 ILE n 4 147 ASP n 4 148 THR n 4 149 GLN n 4 150 GLY n 4 151 ILE n 4 152 HIS n 4 153 LEU n 4 154 LEU n 4 155 ALA n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP VSR_ECOLI 4 ? ? P09184 ? 2 PDB 1CW0 1 ? ? 1CW0 ? 3 PDB 1CW0 2 ? ? 1CW0 ? 4 PDB 1CW0 3 ? ? 1CW0 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1CW0 A 1 ? 155 ? P09184 1 ? 155 ? 2 156 2 2 1CW0 M 1 ? 12 ? 1CW0 301 ? 312 ? 301 312 3 3 1CW0 N 1 ? 3 ? 1CW0 351 ? 353 ? 351 353 4 4 1CW0 O 1 ? 9 ? 1CW0 354 ? 362 ? 354 362 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 1CW0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.47 _exptl_crystal.density_percent_sol 64.51 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.60 _exptl_crystal_grow.pdbx_details 'pH 5.60, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS' _diffrn_detector.pdbx_collection_date 1999-06-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8340 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL24XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL24XU _diffrn_source.pdbx_wavelength 0.8340 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1CW0 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 24.254 _reflns.d_resolution_high 2.300 _reflns.number_obs 15166 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.0590000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.4000 _reflns.B_iso_Wilson_estimate 28.5 _reflns.pdbx_redundancy 4.600 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.3160000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4.60 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1CW0 _refine.ls_number_reflns_obs 14332 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.0 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 94.3 _refine.ls_R_factor_obs 0.2040000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2040000 _refine.ls_R_factor_R_free 0.2300000 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 753 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 31.8 _refine.aniso_B[1][1] 2.87 _refine.aniso_B[2][2] 2.87 _refine.aniso_B[3][3] -5.74 _refine.aniso_B[1][2] 5.97 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.322 _refine.solvent_model_param_bsol 50.36 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'TRUNCATED VSR MODEL, 1VSR' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1CW0 _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.23 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1260 _refine_hist.pdbx_number_atoms_nucleic_acid 488 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 206 _refine_hist.number_atoms_total 1957 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 22.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.86 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.18 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.85 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.82 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.64 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 2384 _refine_ls_shell.R_factor_R_work 0.2430000 _refine_ls_shell.percent_reflns_obs 98.7 _refine_ls_shell.R_factor_R_free 0.2800000 _refine_ls_shell.R_factor_R_free_error 0.026 _refine_ls_shell.percent_reflns_R_free 4.6 _refine_ls_shell.number_reflns_R_free 116 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN-ALLHDG.PARAM PROTEIN-ALLHDG.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA-ALLATOM.PARAM DNA-RNA-ALLATOM.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1CW0 _struct.title 'CRYSTAL STRUCTURE ANALYSIS OF VERY SHORT PATCH REPAIR (VSR) ENDONUCLEASE IN COMPLEX WITH A DUPLEX DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1CW0 _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, MISMATCH, INTERCALATION, ZINC, HYDROLASE/DNA, HYDROLASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 5 ? H N N 7 ? I N N 7 ? J N N 7 ? K N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP D 5 ? ILE D 16 ? ASP A 6 ILE A 17 1 ? 12 HELX_P HELX_P2 2 THR D 21 ? GLN D 34 ? THR A 22 GLN A 35 1 ? 14 HELX_P HELX_P3 3 ASP D 54 ? TYR D 56 ? ASP A 55 TYR A 57 5 ? 3 HELX_P HELX_P4 4 ARG D 81 ? LEU D 106 ? ARG A 82 LEU A 107 1 ? 26 HELX_P HELX_P5 5 GLU D 115 ? ARG D 119 ? GLU A 116 ARG A 120 1 ? 5 HELX_P HELX_P6 6 THR D 125 ? GLY D 139 ? THR A 126 GLY A 140 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E MG . MG ? ? ? 1_555 B DC 3 "O3'" ? ? N MG 202 N DC 353 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc2 metalc ? ? E MG . MG ? ? ? 1_555 C DT 1 OP3 ? ? N MG 202 O DT 354 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc3 metalc ? ? E MG . MG ? ? ? 1_555 D ASP 50 OD1 ? ? N MG 202 A ASP 51 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc4 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? N MG 202 A HOH 496 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? N MG 202 A HOH 498 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? N MG 202 A HOH 596 1_555 ? ? ? ? ? ? ? 1.931 ? ? metalc7 metalc ? ? C DT 1 OP2 ? ? ? 1_555 G MG . MG ? ? O DT 354 A MG 203 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc8 metalc ? ? C DT 1 OP3 ? ? ? 1_555 G MG . MG ? ? O DT 354 A MG 203 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc9 metalc ? ? J HOH . O ? ? ? 1_555 G MG . MG ? ? O HOH 495 A MG 203 1_555 ? ? ? ? ? ? ? 2.059 ? ? metalc10 metalc ? ? D ASP 50 OD2 ? ? ? 1_555 G MG . MG ? ? A ASP 51 A MG 203 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc11 metalc ? ? D THR 62 O ? ? ? 1_555 G MG . MG ? ? A THR 63 A MG 203 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc12 metalc ? ? D CYS 65 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 66 A ZN 201 1_555 ? ? ? ? ? ? ? 2.295 ? ? metalc13 metalc ? ? D HIS 70 ND1 ? ? ? 1_555 F ZN . ZN ? ? A HIS 71 A ZN 201 1_555 ? ? ? ? ? ? ? 1.942 ? ? metalc14 metalc ? ? D CYS 72 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 73 A ZN 201 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc15 metalc ? ? D CYS 116 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 117 A ZN 201 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc16 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 203 A HOH 494 1_555 ? ? ? ? ? ? ? 2.059 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 C DT 9 N3 ? ? M DA 301 O DT 362 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 C DT 9 O4 ? ? M DA 301 O DT 362 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 8 N1 ? ? M DC 302 O DG 361 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 8 O6 ? ? M DC 302 O DG 361 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 8 N2 ? ? M DC 302 O DG 361 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 7 N3 ? ? M DG 303 O DC 360 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 7 O2 ? ? M DG 303 O DC 360 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 7 N4 ? ? M DG 303 O DC 360 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 C DA 6 N1 ? ? M DT 304 O DA 359 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 C DA 6 N6 ? ? M DT 304 O DA 359 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 C DT 5 N3 ? ? M DA 305 O DT 358 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 C DT 5 O4 ? ? M DA 305 O DT 358 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 C DG 4 N1 ? ? M DC 306 O DG 357 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 C DG 4 O6 ? ? M DC 306 O DG 357 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 C DG 4 N2 ? ? M DC 306 O DG 357 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 C DG 3 N1 ? ? M DC 307 O DG 356 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 C DG 3 O6 ? ? M DC 307 O DG 356 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 C DG 3 N2 ? ? M DC 307 O DG 356 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 C DA 2 N1 ? ? M DT 308 O DA 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 C DA 2 N6 ? ? M DT 308 O DA 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 C DT 1 O2 ? ? M DG 309 O DT 354 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 C DT 1 N3 ? ? M DG 309 O DT 354 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? M DG 310 N DC 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? M DG 310 N DC 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? M DG 310 N DC 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? M DC 311 N DG 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? M DC 311 N DG 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? M DC 311 N DG 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 1 N1 ? ? M DT 312 N DA 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 1 N6 ? ? M DT 312 N DA 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG D 39 ? VAL D 40 ? ARG A 40 VAL A 41 A 2 PHE D 51 ? VAL D 53 ? PHE A 52 VAL A 54 A 3 CYS D 58 ? HIS D 63 ? CYS A 59 HIS A 64 A 4 ARG D 109 ? TRP D 114 ? ARG A 110 TRP A 115 A 5 ALA D 144 ? ASP D 147 ? ALA A 145 ASP A 148 A 6 GLY D 150 ? LEU D 153 ? GLY A 151 LEU A 154 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG D 39 ? N ARG A 40 O VAL D 52 ? O VAL A 53 A 2 3 N VAL D 53 ? N VAL A 54 O CYS D 58 ? O CYS A 59 A 3 4 N VAL D 59 ? N VAL A 60 O ARG D 109 ? O ARG A 110 A 4 5 N ILE D 112 ? N ILE A 113 O ALA D 144 ? O ALA A 145 A 5 6 N ASP D 147 ? N ASP A 148 O GLY D 150 ? O GLY A 151 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'BINDING SITE FOR RESIDUE ZN A 201' AC2 Software N MG 202 ? 7 'BINDING SITE FOR RESIDUE MG N 202' AC3 Software A MG 203 ? 5 'BINDING SITE FOR RESIDUE MG A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS D 65 ? CYS A 66 . ? 1_555 ? 2 AC1 4 HIS D 70 ? HIS A 71 . ? 1_555 ? 3 AC1 4 CYS D 72 ? CYS A 73 . ? 1_555 ? 4 AC1 4 CYS D 116 ? CYS A 117 . ? 1_555 ? 5 AC2 7 ARG D 48 ? ARG A 49 . ? 1_555 ? 6 AC2 7 ASP D 50 ? ASP A 51 . ? 1_555 ? 7 AC2 7 HOH K . ? HOH A 496 . ? 1_555 ? 8 AC2 7 HOH K . ? HOH A 498 . ? 1_555 ? 9 AC2 7 HOH K . ? HOH A 596 . ? 1_555 ? 10 AC2 7 DC B 3 ? DC N 353 . ? 1_555 ? 11 AC2 7 DT C 1 ? DT O 354 . ? 1_555 ? 12 AC3 5 ASP D 50 ? ASP A 51 . ? 1_555 ? 13 AC3 5 THR D 62 ? THR A 63 . ? 1_555 ? 14 AC3 5 HOH K . ? HOH A 494 . ? 1_555 ? 15 AC3 5 DT C 1 ? DT O 354 . ? 1_555 ? 16 AC3 5 HOH J . ? HOH O 495 . ? 1_555 ? # _database_PDB_matrix.entry_id 1CW0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1CW0 _atom_sites.fract_transf_matrix[1][1] 0.015873 _atom_sites.fract_transf_matrix[1][2] 0.009164 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018329 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006557 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 301 301 DA A M . n A 1 2 DC 2 302 302 DC C M . n A 1 3 DG 3 303 303 DG G M . n A 1 4 DT 4 304 304 DT T M . n A 1 5 DA 5 305 305 DA A M . n A 1 6 DC 6 306 306 DC C M . n A 1 7 DC 7 307 307 DC C M . n A 1 8 DT 8 308 308 DT T M . n A 1 9 DG 9 309 309 DG G M . n A 1 10 DG 10 310 310 DG G M . n A 1 11 DC 11 311 311 DC C M . n A 1 12 DT 12 312 312 DT T M . n B 2 1 DA 1 351 351 DA A N . n B 2 2 DG 2 352 352 DG G N . n B 2 3 DC 3 353 353 DC C N . n C 3 1 DT 1 354 354 DT T O . n C 3 2 DA 2 355 355 DA A O . n C 3 3 DG 3 356 356 DG G O . n C 3 4 DG 4 357 357 DG G O . n C 3 5 DT 5 358 358 DT T O . n C 3 6 DA 6 359 359 DA A O . n C 3 7 DC 7 360 360 DC C O . n C 3 8 DG 8 361 361 DG G O . n C 3 9 DT 9 362 362 DT T O . n D 4 1 ALA 1 2 2 ALA ALA A . n D 4 2 ASP 2 3 3 ASP ASP A . n D 4 3 VAL 3 4 4 VAL VAL A . n D 4 4 HIS 4 5 5 HIS HIS A . n D 4 5 ASP 5 6 6 ASP ASP A . n D 4 6 LYS 6 7 7 LYS LYS A . n D 4 7 ALA 7 8 8 ALA ALA A . n D 4 8 THR 8 9 9 THR THR A . n D 4 9 ARG 9 10 10 ARG ARG A . n D 4 10 SER 10 11 11 SER SER A . n D 4 11 LYS 11 12 12 LYS LYS A . n D 4 12 ASN 12 13 13 ASN ASN A . n D 4 13 MET 13 14 14 MET MET A . n D 4 14 ARG 14 15 15 ARG ARG A . n D 4 15 ALA 15 16 16 ALA ALA A . n D 4 16 ILE 16 17 17 ILE ILE A . n D 4 17 ALA 17 18 18 ALA ALA A . n D 4 18 THR 18 19 19 THR THR A . n D 4 19 ARG 19 20 20 ARG ARG A . n D 4 20 ASP 20 21 21 ASP ASP A . n D 4 21 THR 21 22 22 THR THR A . n D 4 22 ALA 22 23 23 ALA ALA A . n D 4 23 ILE 23 24 24 ILE ILE A . n D 4 24 GLU 24 25 25 GLU GLU A . n D 4 25 LYS 25 26 26 LYS LYS A . n D 4 26 ARG 26 27 27 ARG ARG A . n D 4 27 LEU 27 28 28 LEU LEU A . n D 4 28 ALA 28 29 29 ALA ALA A . n D 4 29 SER 29 30 30 SER SER A . n D 4 30 LEU 30 31 31 LEU LEU A . n D 4 31 LEU 31 32 32 LEU LEU A . n D 4 32 THR 32 33 33 THR THR A . n D 4 33 GLY 33 34 34 GLY GLY A . n D 4 34 GLN 34 35 35 GLN GLN A . n D 4 35 GLY 35 36 36 GLY GLY A . n D 4 36 LEU 36 37 37 LEU LEU A . n D 4 37 ALA 37 38 38 ALA ALA A . n D 4 38 PHE 38 39 39 PHE PHE A . n D 4 39 ARG 39 40 40 ARG ARG A . n D 4 40 VAL 40 41 41 VAL VAL A . n D 4 41 GLN 41 42 42 GLN GLN A . n D 4 42 ASP 42 43 43 ASP ASP A . n D 4 43 ALA 43 44 44 ALA ALA A . n D 4 44 SER 44 45 45 SER SER A . n D 4 45 LEU 45 46 46 LEU LEU A . n D 4 46 PRO 46 47 47 PRO PRO A . n D 4 47 GLY 47 48 48 GLY GLY A . n D 4 48 ARG 48 49 49 ARG ARG A . n D 4 49 PRO 49 50 50 PRO PRO A . n D 4 50 ASP 50 51 51 ASP ASP A . n D 4 51 PHE 51 52 52 PHE PHE A . n D 4 52 VAL 52 53 53 VAL VAL A . n D 4 53 VAL 53 54 54 VAL VAL A . n D 4 54 ASP 54 55 55 ASP ASP A . n D 4 55 GLU 55 56 56 GLU GLU A . n D 4 56 TYR 56 57 57 TYR TYR A . n D 4 57 ARG 57 58 58 ARG ARG A . n D 4 58 CYS 58 59 59 CYS CYS A . n D 4 59 VAL 59 60 60 VAL VAL A . n D 4 60 ILE 60 61 61 ILE ILE A . n D 4 61 PHE 61 62 62 PHE PHE A . n D 4 62 THR 62 63 63 THR THR A . n D 4 63 HIS 63 64 64 HIS HIS A . n D 4 64 GLY 64 65 65 GLY GLY A . n D 4 65 CYS 65 66 66 CYS CYS A . n D 4 66 PHE 66 67 67 PHE PHE A . n D 4 67 TRP 67 68 68 TRP TRP A . n D 4 68 HIS 68 69 69 HIS HIS A . n D 4 69 HIS 69 70 70 HIS HIS A . n D 4 70 HIS 70 71 71 HIS HIS A . n D 4 71 HIS 71 72 72 HIS HIS A . n D 4 72 CYS 72 73 73 CYS CYS A . n D 4 73 TYR 73 74 74 TYR TYR A . n D 4 74 LEU 74 75 75 LEU LEU A . n D 4 75 PHE 75 76 76 PHE PHE A . n D 4 76 LYS 76 77 77 LYS LYS A . n D 4 77 VAL 77 78 78 VAL VAL A . n D 4 78 PRO 78 79 79 PRO PRO A . n D 4 79 ALA 79 80 80 ALA ALA A . n D 4 80 THR 80 81 81 THR THR A . n D 4 81 ARG 81 82 82 ARG ARG A . n D 4 82 THR 82 83 83 THR THR A . n D 4 83 GLU 83 84 84 GLU GLU A . n D 4 84 PHE 84 85 85 PHE PHE A . n D 4 85 TRP 85 86 86 TRP TRP A . n D 4 86 LEU 86 87 87 LEU LEU A . n D 4 87 GLU 87 88 88 GLU GLU A . n D 4 88 LYS 88 89 89 LYS LYS A . n D 4 89 ILE 89 90 90 ILE ILE A . n D 4 90 GLY 90 91 91 GLY GLY A . n D 4 91 LYS 91 92 92 LYS LYS A . n D 4 92 ASN 92 93 93 ASN ASN A . n D 4 93 VAL 93 94 94 VAL VAL A . n D 4 94 GLU 94 95 95 GLU GLU A . n D 4 95 ARG 95 96 96 ARG ARG A . n D 4 96 ASP 96 97 97 ASP ASP A . n D 4 97 ARG 97 98 98 ARG ARG A . n D 4 98 ARG 98 99 99 ARG ARG A . n D 4 99 ASP 99 100 100 ASP ASP A . n D 4 100 ILE 100 101 101 ILE ILE A . n D 4 101 SER 101 102 102 SER SER A . n D 4 102 ARG 102 103 103 ARG ARG A . n D 4 103 LEU 103 104 104 LEU LEU A . n D 4 104 GLN 104 105 105 GLN GLN A . n D 4 105 GLU 105 106 106 GLU GLU A . n D 4 106 LEU 106 107 107 LEU LEU A . n D 4 107 GLY 107 108 108 GLY GLY A . n D 4 108 TRP 108 109 109 TRP TRP A . n D 4 109 ARG 109 110 110 ARG ARG A . n D 4 110 VAL 110 111 111 VAL VAL A . n D 4 111 LEU 111 112 112 LEU LEU A . n D 4 112 ILE 112 113 113 ILE ILE A . n D 4 113 VAL 113 114 114 VAL VAL A . n D 4 114 TRP 114 115 115 TRP TRP A . n D 4 115 GLU 115 116 116 GLU GLU A . n D 4 116 CYS 116 117 117 CYS CYS A . n D 4 117 ALA 117 118 118 ALA ALA A . n D 4 118 LEU 118 119 119 LEU LEU A . n D 4 119 ARG 119 120 120 ARG ARG A . n D 4 120 GLY 120 121 121 GLY GLY A . n D 4 121 ARG 121 122 122 ARG ARG A . n D 4 122 GLU 122 123 123 GLU GLU A . n D 4 123 LYS 123 124 124 LYS LYS A . n D 4 124 LEU 124 125 125 LEU LEU A . n D 4 125 THR 125 126 126 THR THR A . n D 4 126 ASP 126 127 127 ASP ASP A . n D 4 127 GLU 127 128 128 GLU GLU A . n D 4 128 ALA 128 129 129 ALA ALA A . n D 4 129 LEU 129 130 130 LEU LEU A . n D 4 130 THR 130 131 131 THR THR A . n D 4 131 GLU 131 132 132 GLU GLU A . n D 4 132 ARG 132 133 133 ARG ARG A . n D 4 133 LEU 133 134 134 LEU LEU A . n D 4 134 GLU 134 135 135 GLU GLU A . n D 4 135 GLU 135 136 136 GLU GLU A . n D 4 136 TRP 136 137 137 TRP TRP A . n D 4 137 ILE 137 138 138 ILE ILE A . n D 4 138 CYS 138 139 139 CYS CYS A . n D 4 139 GLY 139 140 140 GLY GLY A . n D 4 140 GLU 140 141 141 GLU GLU A . n D 4 141 GLY 141 142 142 GLY GLY A . n D 4 142 ALA 142 143 143 ALA ALA A . n D 4 143 SER 143 144 144 SER SER A . n D 4 144 ALA 144 145 145 ALA ALA A . n D 4 145 GLN 145 146 146 GLN GLN A . n D 4 146 ILE 146 147 147 ILE ILE A . n D 4 147 ASP 147 148 148 ASP ASP A . n D 4 148 THR 148 149 149 THR THR A . n D 4 149 GLN 149 150 150 GLN GLN A . n D 4 150 GLY 150 151 151 GLY GLY A . n D 4 151 ILE 151 152 152 ILE ILE A . n D 4 152 HIS 152 153 153 HIS HIS A . n D 4 153 LEU 153 154 154 LEU LEU A . n D 4 154 LEU 154 155 155 LEU LEU A . n D 4 155 ALA 155 156 156 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 202 202 MG MG N . F 6 ZN 1 201 201 ZN ZN A . G 5 MG 1 203 203 MG MG A . H 7 HOH 1 402 402 HOH HOH M . H 7 HOH 2 420 420 HOH HOH M . H 7 HOH 3 453 453 HOH HOH M . H 7 HOH 4 459 459 HOH HOH M . H 7 HOH 5 467 467 HOH HOH M . H 7 HOH 6 482 482 HOH HOH M . H 7 HOH 7 485 485 HOH HOH M . H 7 HOH 8 503 503 HOH HOH M . H 7 HOH 9 515 515 HOH HOH M . H 7 HOH 10 518 518 HOH HOH M . H 7 HOH 11 520 520 HOH HOH M . H 7 HOH 12 527 527 HOH HOH M . H 7 HOH 13 533 533 HOH HOH M . H 7 HOH 14 534 534 HOH HOH M . H 7 HOH 15 536 536 HOH HOH M . H 7 HOH 16 539 539 HOH HOH M . H 7 HOH 17 568 568 HOH HOH M . H 7 HOH 18 570 570 HOH HOH M . H 7 HOH 19 577 577 HOH HOH M . H 7 HOH 20 585 585 HOH HOH M . H 7 HOH 21 587 587 HOH HOH M . H 7 HOH 22 591 591 HOH HOH M . I 7 HOH 1 432 432 HOH HOH N . I 7 HOH 2 443 443 HOH HOH N . I 7 HOH 3 450 450 HOH HOH N . I 7 HOH 4 460 460 HOH HOH N . I 7 HOH 5 466 466 HOH HOH N . I 7 HOH 6 478 478 HOH HOH N . I 7 HOH 7 483 483 HOH HOH N . I 7 HOH 8 500 500 HOH HOH N . I 7 HOH 9 509 509 HOH HOH N . I 7 HOH 10 511 511 HOH HOH N . I 7 HOH 11 553 553 HOH HOH N . J 7 HOH 1 436 436 HOH HOH O . J 7 HOH 2 446 446 HOH HOH O . J 7 HOH 3 457 457 HOH HOH O . J 7 HOH 4 472 472 HOH HOH O . J 7 HOH 5 490 490 HOH HOH O . J 7 HOH 6 493 493 HOH HOH O . J 7 HOH 7 495 495 HOH HOH O . J 7 HOH 8 502 502 HOH HOH O . J 7 HOH 9 508 508 HOH HOH O . J 7 HOH 10 522 522 HOH HOH O . J 7 HOH 11 523 523 HOH HOH O . J 7 HOH 12 530 530 HOH HOH O . J 7 HOH 13 547 547 HOH HOH O . J 7 HOH 14 552 552 HOH HOH O . J 7 HOH 15 567 567 HOH HOH O . J 7 HOH 16 589 589 HOH HOH O . J 7 HOH 17 592 592 HOH HOH O . J 7 HOH 18 602 602 HOH HOH O . K 7 HOH 1 401 401 HOH HOH A . K 7 HOH 2 403 403 HOH HOH A . K 7 HOH 3 404 404 HOH HOH A . K 7 HOH 4 405 405 HOH HOH A . K 7 HOH 5 406 406 HOH HOH A . K 7 HOH 6 407 407 HOH HOH A . K 7 HOH 7 408 408 HOH HOH A . K 7 HOH 8 409 409 HOH HOH A . K 7 HOH 9 410 410 HOH HOH A . K 7 HOH 10 411 411 HOH HOH A . K 7 HOH 11 412 412 HOH HOH A . K 7 HOH 12 413 413 HOH HOH A . K 7 HOH 13 414 414 HOH HOH A . K 7 HOH 14 415 415 HOH HOH A . K 7 HOH 15 416 416 HOH HOH A . K 7 HOH 16 417 417 HOH HOH A . K 7 HOH 17 418 418 HOH HOH A . K 7 HOH 18 419 419 HOH HOH A . K 7 HOH 19 421 421 HOH HOH A . K 7 HOH 20 422 422 HOH HOH A . K 7 HOH 21 423 423 HOH HOH A . K 7 HOH 22 424 424 HOH HOH A . K 7 HOH 23 425 425 HOH HOH A . K 7 HOH 24 426 426 HOH HOH A . K 7 HOH 25 427 427 HOH HOH A . K 7 HOH 26 428 428 HOH HOH A . K 7 HOH 27 429 429 HOH HOH A . K 7 HOH 28 430 430 HOH HOH A . K 7 HOH 29 431 431 HOH HOH A . K 7 HOH 30 433 433 HOH HOH A . K 7 HOH 31 434 434 HOH HOH A . K 7 HOH 32 435 435 HOH HOH A . K 7 HOH 33 437 437 HOH HOH A . K 7 HOH 34 438 438 HOH HOH A . K 7 HOH 35 439 439 HOH HOH A . K 7 HOH 36 440 440 HOH HOH A . K 7 HOH 37 441 441 HOH HOH A . K 7 HOH 38 442 442 HOH HOH A . K 7 HOH 39 444 444 HOH HOH A . K 7 HOH 40 445 445 HOH HOH A . K 7 HOH 41 447 447 HOH HOH A . K 7 HOH 42 448 448 HOH HOH A . K 7 HOH 43 449 449 HOH HOH A . K 7 HOH 44 451 451 HOH HOH A . K 7 HOH 45 452 452 HOH HOH A . K 7 HOH 46 454 454 HOH HOH A . K 7 HOH 47 455 455 HOH HOH A . K 7 HOH 48 456 456 HOH HOH A . K 7 HOH 49 458 458 HOH HOH A . K 7 HOH 50 461 461 HOH HOH A . K 7 HOH 51 462 462 HOH HOH A . K 7 HOH 52 463 463 HOH HOH A . K 7 HOH 53 464 464 HOH HOH A . K 7 HOH 54 465 465 HOH HOH A . K 7 HOH 55 468 468 HOH HOH A . K 7 HOH 56 469 469 HOH HOH A . K 7 HOH 57 470 470 HOH HOH A . K 7 HOH 58 471 471 HOH HOH A . K 7 HOH 59 473 473 HOH HOH A . K 7 HOH 60 474 474 HOH HOH A . K 7 HOH 61 475 475 HOH HOH A . K 7 HOH 62 476 476 HOH HOH A . K 7 HOH 63 477 477 HOH HOH A . K 7 HOH 64 479 479 HOH HOH A . K 7 HOH 65 480 480 HOH HOH A . K 7 HOH 66 481 481 HOH HOH A . K 7 HOH 67 484 484 HOH HOH A . K 7 HOH 68 486 486 HOH HOH A . K 7 HOH 69 487 487 HOH HOH A . K 7 HOH 70 488 488 HOH HOH A . K 7 HOH 71 489 489 HOH HOH A . K 7 HOH 72 491 491 HOH HOH A . K 7 HOH 73 492 492 HOH HOH A . K 7 HOH 74 494 494 HOH HOH A . K 7 HOH 75 496 496 HOH HOH A . K 7 HOH 76 497 497 HOH HOH A . K 7 HOH 77 498 498 HOH HOH A . K 7 HOH 78 499 499 HOH HOH A . K 7 HOH 79 501 501 HOH HOH A . K 7 HOH 80 504 504 HOH HOH A . K 7 HOH 81 505 505 HOH HOH A . K 7 HOH 82 506 506 HOH HOH A . K 7 HOH 83 507 507 HOH HOH A . K 7 HOH 84 510 510 HOH HOH A . K 7 HOH 85 512 512 HOH HOH A . K 7 HOH 86 513 513 HOH HOH A . K 7 HOH 87 514 514 HOH HOH A . K 7 HOH 88 516 516 HOH HOH A . K 7 HOH 89 517 517 HOH HOH A . K 7 HOH 90 519 519 HOH HOH A . K 7 HOH 91 521 521 HOH HOH A . K 7 HOH 92 524 524 HOH HOH A . K 7 HOH 93 525 525 HOH HOH A . K 7 HOH 94 526 526 HOH HOH A . K 7 HOH 95 528 528 HOH HOH A . K 7 HOH 96 529 529 HOH HOH A . K 7 HOH 97 531 531 HOH HOH A . K 7 HOH 98 532 532 HOH HOH A . K 7 HOH 99 535 535 HOH HOH A . K 7 HOH 100 537 537 HOH HOH A . K 7 HOH 101 538 538 HOH HOH A . K 7 HOH 102 540 540 HOH HOH A . K 7 HOH 103 541 541 HOH HOH A . K 7 HOH 104 542 542 HOH HOH A . K 7 HOH 105 543 543 HOH HOH A . K 7 HOH 106 544 544 HOH HOH A . K 7 HOH 107 545 545 HOH HOH A . K 7 HOH 108 546 546 HOH HOH A . K 7 HOH 109 548 548 HOH HOH A . K 7 HOH 110 549 549 HOH HOH A . K 7 HOH 111 550 550 HOH HOH A . K 7 HOH 112 551 551 HOH HOH A . K 7 HOH 113 554 554 HOH HOH A . K 7 HOH 114 555 555 HOH HOH A . K 7 HOH 115 556 556 HOH HOH A . K 7 HOH 116 557 557 HOH HOH A . K 7 HOH 117 558 558 HOH HOH A . K 7 HOH 118 559 559 HOH HOH A . K 7 HOH 119 560 560 HOH HOH A . K 7 HOH 120 561 561 HOH HOH A . K 7 HOH 121 562 562 HOH HOH A . K 7 HOH 122 563 563 HOH HOH A . K 7 HOH 123 564 564 HOH HOH A . K 7 HOH 124 565 565 HOH HOH A . K 7 HOH 125 566 566 HOH HOH A . K 7 HOH 126 569 569 HOH HOH A . K 7 HOH 127 571 571 HOH HOH A . K 7 HOH 128 572 572 HOH HOH A . K 7 HOH 129 573 573 HOH HOH A . K 7 HOH 130 574 574 HOH HOH A . K 7 HOH 131 575 575 HOH HOH A . K 7 HOH 132 576 576 HOH HOH A . K 7 HOH 133 578 578 HOH HOH A . K 7 HOH 134 579 579 HOH HOH A . K 7 HOH 135 580 580 HOH HOH A . K 7 HOH 136 581 581 HOH HOH A . K 7 HOH 137 582 582 HOH HOH A . K 7 HOH 138 583 583 HOH HOH A . K 7 HOH 139 584 584 HOH HOH A . K 7 HOH 140 586 586 HOH HOH A . K 7 HOH 141 588 588 HOH HOH A . K 7 HOH 142 590 590 HOH HOH A . K 7 HOH 143 593 593 HOH HOH A . K 7 HOH 144 594 594 HOH HOH A . K 7 HOH 145 595 595 HOH HOH A . K 7 HOH 146 596 596 HOH HOH A . K 7 HOH 147 597 597 HOH HOH A . K 7 HOH 148 598 598 HOH HOH A . K 7 HOH 149 599 599 HOH HOH A . K 7 HOH 150 600 600 HOH HOH A . K 7 HOH 151 601 601 HOH HOH A . K 7 HOH 152 603 603 HOH HOH A . K 7 HOH 153 604 604 HOH HOH A . K 7 HOH 154 605 605 HOH HOH A . K 7 HOH 155 606 606 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? B DC 3 ? N DC 353 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 OP3 ? C DT 1 ? O DT 354 ? 1_555 77.0 ? 2 "O3'" ? B DC 3 ? N DC 353 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 OD1 ? D ASP 50 ? A ASP 51 ? 1_555 154.7 ? 3 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 OD1 ? D ASP 50 ? A ASP 51 ? 1_555 85.4 ? 4 "O3'" ? B DC 3 ? N DC 353 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 496 ? 1_555 85.8 ? 5 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 496 ? 1_555 86.5 ? 6 OD1 ? D ASP 50 ? A ASP 51 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 496 ? 1_555 75.0 ? 7 "O3'" ? B DC 3 ? N DC 353 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 498 ? 1_555 95.0 ? 8 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 498 ? 1_555 170.6 ? 9 OD1 ? D ASP 50 ? A ASP 51 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 498 ? 1_555 100.5 ? 10 O ? K HOH . ? A HOH 496 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 498 ? 1_555 87.9 ? 11 "O3'" ? B DC 3 ? N DC 353 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 596 ? 1_555 100.6 ? 12 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 596 ? 1_555 87.3 ? 13 OD1 ? D ASP 50 ? A ASP 51 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 596 ? 1_555 96.5 ? 14 O ? K HOH . ? A HOH 496 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 596 ? 1_555 169.9 ? 15 O ? K HOH . ? A HOH 498 ? 1_555 MG ? E MG . ? N MG 202 ? 1_555 O ? K HOH . ? A HOH 596 ? 1_555 99.2 ? 16 OP2 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 OP3 ? C DT 1 ? O DT 354 ? 1_555 65.8 ? 17 OP2 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? J HOH . ? O HOH 495 ? 1_555 92.6 ? 18 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? J HOH . ? O HOH 495 ? 1_555 98.0 ? 19 OP2 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 OD2 ? D ASP 50 ? A ASP 51 ? 1_555 170.3 ? 20 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 OD2 ? D ASP 50 ? A ASP 51 ? 1_555 104.5 ? 21 O ? J HOH . ? O HOH 495 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 OD2 ? D ASP 50 ? A ASP 51 ? 1_555 90.0 ? 22 OP2 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? D THR 62 ? A THR 63 ? 1_555 98.1 ? 23 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? D THR 62 ? A THR 63 ? 1_555 163.9 ? 24 O ? J HOH . ? O HOH 495 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? D THR 62 ? A THR 63 ? 1_555 81.7 ? 25 OD2 ? D ASP 50 ? A ASP 51 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? D THR 62 ? A THR 63 ? 1_555 91.6 ? 26 OP2 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? K HOH . ? A HOH 494 ? 1_555 88.3 ? 27 OP3 ? C DT 1 ? O DT 354 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? K HOH . ? A HOH 494 ? 1_555 89.1 ? 28 O ? J HOH . ? O HOH 495 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? K HOH . ? A HOH 494 ? 1_555 172.6 ? 29 OD2 ? D ASP 50 ? A ASP 51 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? K HOH . ? A HOH 494 ? 1_555 90.3 ? 30 O ? D THR 62 ? A THR 63 ? 1_555 MG ? G MG . ? A MG 203 ? 1_555 O ? K HOH . ? A HOH 494 ? 1_555 90.9 ? 31 SG ? D CYS 65 ? A CYS 66 ? 1_555 ZN ? F ZN . ? A ZN 201 ? 1_555 ND1 ? D HIS 70 ? A HIS 71 ? 1_555 109.9 ? 32 SG ? D CYS 65 ? A CYS 66 ? 1_555 ZN ? F ZN . ? A ZN 201 ? 1_555 SG ? D CYS 72 ? A CYS 73 ? 1_555 114.9 ? 33 ND1 ? D HIS 70 ? A HIS 71 ? 1_555 ZN ? F ZN . ? A ZN 201 ? 1_555 SG ? D CYS 72 ? A CYS 73 ? 1_555 107.1 ? 34 SG ? D CYS 65 ? A CYS 66 ? 1_555 ZN ? F ZN . ? A ZN 201 ? 1_555 SG ? D CYS 116 ? A CYS 117 ? 1_555 106.6 ? 35 ND1 ? D HIS 70 ? A HIS 71 ? 1_555 ZN ? F ZN . ? A ZN 201 ? 1_555 SG ? D CYS 116 ? A CYS 117 ? 1_555 100.2 ? 36 SG ? D CYS 72 ? A CYS 73 ? 1_555 ZN ? F ZN . ? A ZN 201 ? 1_555 SG ? D CYS 116 ? A CYS 117 ? 1_555 117.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-12-12 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 49 ? ? 43.59 71.37 2 1 ARG A 58 ? ? 38.95 54.41 3 1 HIS A 70 ? ? 48.63 70.75 4 1 ASP A 148 ? ? -123.44 -162.53 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 27 ? ? 0.103 'SIDE CHAIN' 2 1 ARG A 49 ? ? 0.281 'SIDE CHAIN' 3 1 ARG A 58 ? ? 0.153 'SIDE CHAIN' 4 1 ARG A 82 ? ? 0.124 'SIDE CHAIN' 5 1 ARG A 98 ? ? 0.112 'SIDE CHAIN' 6 1 ARG A 103 ? ? 0.119 'SIDE CHAIN' 7 1 ARG A 120 ? ? 0.113 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 77 ? CB ? D LYS 76 CB 2 1 Y 0 A LYS 77 ? CG ? D LYS 76 CG 3 1 Y 0 A LYS 77 ? CD ? D LYS 76 CD 4 1 Y 0 A LYS 77 ? CE ? D LYS 76 CE 5 1 Y 0 A LYS 77 ? NZ ? D LYS 76 NZ 6 1 Y 0 A GLU 106 ? CB ? D GLU 105 CB 7 1 Y 0 A GLU 106 ? CG ? D GLU 105 CG 8 1 Y 0 A GLU 106 ? CD ? D GLU 105 CD 9 1 Y 0 A GLU 106 ? OE1 ? D GLU 105 OE1 10 1 Y 0 A GLU 106 ? OE2 ? D GLU 105 OE2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 ZN ZN ZN N N 535 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1CW0 'double helix' 1CW0 'b-form double helix' 1CW0 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 C DT 9 1_555 -0.079 -0.111 0.211 6.221 -9.974 5.396 1 M_DA301:DT362_O M 301 ? O 362 ? 20 1 1 A DC 2 1_555 C DG 8 1_555 0.173 -0.038 -0.231 4.403 -8.266 1.417 2 M_DC302:DG361_O M 302 ? O 361 ? 19 1 1 A DG 3 1_555 C DC 7 1_555 -0.285 -0.025 -0.114 -3.092 -5.571 0.583 3 M_DG303:DC360_O M 303 ? O 360 ? 19 1 1 A DT 4 1_555 C DA 6 1_555 -0.042 -0.060 -0.023 7.287 -7.682 -0.358 4 M_DT304:DA359_O M 304 ? O 359 ? 20 1 1 A DA 5 1_555 C DT 5 1_555 -0.007 -0.165 -0.137 -1.217 -9.655 -0.028 5 M_DA305:DT358_O M 305 ? O 358 ? 20 1 1 A DC 6 1_555 C DG 4 1_555 0.186 -0.139 -0.010 -0.795 -9.855 -1.440 6 M_DC306:DG357_O M 306 ? O 357 ? 19 1 1 A DC 7 1_555 C DG 3 1_555 0.176 -0.071 0.352 -13.001 1.016 0.249 7 M_DC307:DG356_O M 307 ? O 356 ? 19 1 1 A DT 8 1_555 C DA 2 1_555 0.038 -0.141 0.052 0.139 2.296 2.588 8 M_DT308:DA355_O M 308 ? O 355 ? 20 1 1 A DG 9 1_555 C DT 1 1_555 -2.503 -0.492 -0.221 -14.776 -11.779 -1.034 9 M_DG309:DT354_O M 309 ? O 354 ? 28 ? 1 A DG 10 1_555 B DC 3 1_555 -0.130 -0.072 -0.140 -7.941 -13.771 -0.526 10 M_DG310:DC353_N M 310 ? N 353 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.078 -0.080 -0.075 -5.292 -3.204 0.170 11 M_DC311:DG352_N M 311 ? N 352 ? 19 1 1 A DT 12 1_555 B DA 1 1_555 0.013 -0.132 -0.038 -4.366 -12.782 4.284 12 M_DT312:DA351_N M 312 ? N 351 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 C DT 9 1_555 A DC 2 1_555 C DG 8 1_555 -0.229 -0.519 3.275 3.079 2.092 33.144 -1.249 0.907 3.204 3.652 -5.376 33.347 1 MM_DA301DC302:DG361DT362_OO M 301 ? O 362 ? M 302 ? O 361 ? 1 A DC 2 1_555 C DG 8 1_555 A DG 3 1_555 C DC 7 1_555 -0.200 0.629 3.476 -1.350 8.651 36.090 -0.269 0.118 3.534 13.716 2.140 37.103 2 MM_DC302DG303:DC360DG361_OO M 302 ? O 361 ? M 303 ? O 360 ? 1 A DG 3 1_555 C DC 7 1_555 A DT 4 1_555 C DA 6 1_555 -0.235 -0.432 3.020 -1.152 4.281 30.957 -1.544 0.237 2.942 7.968 2.145 31.266 3 MM_DG303DT304:DA359DC360_OO M 303 ? O 360 ? M 304 ? O 359 ? 1 A DT 4 1_555 C DA 6 1_555 A DA 5 1_555 C DT 5 1_555 -0.072 0.487 3.502 0.630 5.779 40.983 0.021 0.174 3.535 8.204 -0.895 41.376 4 MM_DT304DA305:DT358DA359_OO M 304 ? O 359 ? M 305 ? O 358 ? 1 A DA 5 1_555 C DT 5 1_555 A DC 6 1_555 C DG 4 1_555 -0.087 -0.230 3.195 -1.658 6.418 32.990 -1.415 -0.112 3.098 11.161 2.884 33.631 5 MM_DA305DC306:DG357DT358_OO M 305 ? O 358 ? M 306 ? O 357 ? 1 A DC 6 1_555 C DG 4 1_555 A DC 7 1_555 C DG 3 1_555 1.489 0.367 3.638 2.507 9.156 37.499 -0.732 -1.897 3.712 13.970 -3.826 38.640 6 MM_DC306DC307:DG356DG357_OO M 306 ? O 357 ? M 307 ? O 356 ? 1 A DC 7 1_555 C DG 3 1_555 A DT 8 1_555 C DA 2 1_555 -0.162 0.550 3.090 6.486 15.897 20.988 -2.857 1.992 2.687 36.716 -14.981 27.055 7 MM_DC307DT308:DA355DG356_OO M 307 ? O 356 ? M 308 ? O 355 ? 1 A DG 9 1_555 C DT 1 1_555 A DG 10 1_555 B DC 3 1_555 -0.350 -0.323 3.211 -6.455 13.418 36.266 -2.060 -0.236 2.935 20.525 9.874 39.108 8 MM_DG309DG310:DC353DT354_NO M 309 ? O 354 ? M 310 ? N 353 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 0.266 -0.047 3.209 -0.039 5.465 35.521 -0.841 -0.436 3.167 8.892 0.064 35.926 9 MM_DG310DC311:DG352DC353_NN M 310 ? N 353 ? M 311 ? N 352 ? 1 A DC 11 1_555 B DG 2 1_555 A DT 12 1_555 B DA 1 1_555 0.032 -0.406 3.312 0.837 1.943 32.418 -1.070 0.090 3.282 3.476 -1.497 32.485 10 MM_DC311DT312:DA351DG352_NN M 311 ? N 352 ? M 312 ? N 351 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'ZINC ION' ZN 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1VSR _pdbx_initial_refinement_model.details 'TRUNCATED VSR MODEL, 1VSR' #