data_1D0S # _entry.id 1D0S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1D0S RCSB RCSB009691 WWPDB D_1000009691 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1D0V _pdbx_database_related.details ;1D0V CONTAINS THE SAME PROTEIN COMPLEXED WITH ITS REACTION PRODUCTS WHILE THIS STRUCTURE CONTAINS ITS SUBSTRATE (5,6-DIMETHYLBENZIMIDAZOLE) ; _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D0S _pdbx_database_status.recvd_initial_deposition_date 1999-09-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cheong, C.-G.' 1 'Escalante-Semerena, J.C.' 2 'Rayment, I.' 3 # _citation.id primary _citation.title ;The three-dimensional structures of nicotinate mononucleotide:5,6- dimethylbenzimidazole phosphoribosyltransferase (CobT) from Salmonella typhimurium complexed with 5,6-dimethybenzimidazole and its reaction products determined to 1.9 A resolution. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 38 _citation.page_first 16125 _citation.page_last 16135 _citation.year 1999 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10587435 _citation.pdbx_database_id_DOI 10.1021/bi991752c # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cheong, C.G.' 1 primary 'Escalante-Semerena, J.C.' 2 primary 'Rayment, I.' 3 # _cell.entry_id 1D0S _cell.length_a 72.100 _cell.length_b 90.200 _cell.length_c 47.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D0S _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'NICOTINATE MONONUCLEOTIDE:5,6-DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE' 36645.566 1 2.4.2.21 ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn 5,6-DIMETHYLBENZIMIDAZOLE 146.189 1 ? ? ? ? 4 water nat water 18.015 132 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQTLHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVS PKIVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYAC DLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGG FDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSG AALAMPIVEAACAMFHNMGELAASNIVLPEGNANAT ; _entity_poly.pdbx_seq_one_letter_code_can ;MQTLHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVS PKIVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYAC DLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGG FDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSG AALAMPIVEAACAMFHNMGELAASNIVLPEGNANAT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 THR n 1 4 LEU n 1 5 HIS n 1 6 ALA n 1 7 LEU n 1 8 LEU n 1 9 ARG n 1 10 ASP n 1 11 ILE n 1 12 PRO n 1 13 ALA n 1 14 PRO n 1 15 ASP n 1 16 ALA n 1 17 GLU n 1 18 ALA n 1 19 MET n 1 20 ALA n 1 21 ARG n 1 22 THR n 1 23 GLN n 1 24 GLN n 1 25 HIS n 1 26 ILE n 1 27 ASP n 1 28 GLY n 1 29 LEU n 1 30 LEU n 1 31 LYS n 1 32 PRO n 1 33 PRO n 1 34 GLY n 1 35 SER n 1 36 LEU n 1 37 GLY n 1 38 ARG n 1 39 LEU n 1 40 GLU n 1 41 THR n 1 42 LEU n 1 43 ALA n 1 44 VAL n 1 45 GLN n 1 46 LEU n 1 47 ALA n 1 48 GLY n 1 49 MET n 1 50 PRO n 1 51 GLY n 1 52 LEU n 1 53 ASN n 1 54 GLY n 1 55 THR n 1 56 PRO n 1 57 GLN n 1 58 VAL n 1 59 GLY n 1 60 GLU n 1 61 LYS n 1 62 ALA n 1 63 VAL n 1 64 LEU n 1 65 VAL n 1 66 MET n 1 67 CYS n 1 68 ALA n 1 69 ASP n 1 70 HIS n 1 71 GLY n 1 72 VAL n 1 73 TRP n 1 74 ASP n 1 75 GLU n 1 76 GLY n 1 77 VAL n 1 78 ALA n 1 79 VAL n 1 80 SER n 1 81 PRO n 1 82 LYS n 1 83 ILE n 1 84 VAL n 1 85 THR n 1 86 ALA n 1 87 ILE n 1 88 GLN n 1 89 ALA n 1 90 ALA n 1 91 ASN n 1 92 MET n 1 93 THR n 1 94 ARG n 1 95 GLY n 1 96 THR n 1 97 THR n 1 98 GLY n 1 99 VAL n 1 100 CYS n 1 101 VAL n 1 102 LEU n 1 103 ALA n 1 104 ALA n 1 105 GLN n 1 106 ALA n 1 107 GLY n 1 108 ALA n 1 109 LYS n 1 110 VAL n 1 111 HIS n 1 112 VAL n 1 113 ILE n 1 114 ASP n 1 115 VAL n 1 116 GLY n 1 117 ILE n 1 118 ASP n 1 119 ALA n 1 120 GLU n 1 121 PRO n 1 122 ILE n 1 123 PRO n 1 124 GLY n 1 125 VAL n 1 126 VAL n 1 127 ASN n 1 128 MET n 1 129 ARG n 1 130 VAL n 1 131 ALA n 1 132 ARG n 1 133 GLY n 1 134 CYS n 1 135 GLY n 1 136 ASN n 1 137 ILE n 1 138 ALA n 1 139 VAL n 1 140 GLY n 1 141 PRO n 1 142 ALA n 1 143 MET n 1 144 SER n 1 145 ARG n 1 146 LEU n 1 147 GLN n 1 148 ALA n 1 149 GLU n 1 150 ALA n 1 151 LEU n 1 152 LEU n 1 153 LEU n 1 154 GLU n 1 155 VAL n 1 156 SER n 1 157 ARG n 1 158 TYR n 1 159 ALA n 1 160 CYS n 1 161 ASP n 1 162 LEU n 1 163 ALA n 1 164 GLN n 1 165 ARG n 1 166 GLY n 1 167 VAL n 1 168 THR n 1 169 LEU n 1 170 PHE n 1 171 GLY n 1 172 VAL n 1 173 GLY n 1 174 GLU n 1 175 LEU n 1 176 GLY n 1 177 MET n 1 178 ALA n 1 179 ASN n 1 180 THR n 1 181 THR n 1 182 PRO n 1 183 ALA n 1 184 ALA n 1 185 ALA n 1 186 MET n 1 187 VAL n 1 188 SER n 1 189 VAL n 1 190 PHE n 1 191 THR n 1 192 GLY n 1 193 SER n 1 194 ASP n 1 195 ALA n 1 196 LYS n 1 197 GLU n 1 198 VAL n 1 199 VAL n 1 200 GLY n 1 201 ILE n 1 202 GLY n 1 203 ALA n 1 204 ASN n 1 205 LEU n 1 206 PRO n 1 207 PRO n 1 208 SER n 1 209 ARG n 1 210 ILE n 1 211 ASP n 1 212 ASN n 1 213 LYS n 1 214 VAL n 1 215 ASP n 1 216 VAL n 1 217 VAL n 1 218 ARG n 1 219 ARG n 1 220 ALA n 1 221 ILE n 1 222 ALA n 1 223 ILE n 1 224 ASN n 1 225 GLN n 1 226 PRO n 1 227 ASN n 1 228 PRO n 1 229 ARG n 1 230 ASP n 1 231 GLY n 1 232 ILE n 1 233 ASP n 1 234 VAL n 1 235 LEU n 1 236 SER n 1 237 LYS n 1 238 VAL n 1 239 GLY n 1 240 GLY n 1 241 PHE n 1 242 ASP n 1 243 LEU n 1 244 VAL n 1 245 GLY n 1 246 MET n 1 247 THR n 1 248 GLY n 1 249 VAL n 1 250 MET n 1 251 LEU n 1 252 GLY n 1 253 ALA n 1 254 ALA n 1 255 ARG n 1 256 CYS n 1 257 GLY n 1 258 LEU n 1 259 PRO n 1 260 VAL n 1 261 LEU n 1 262 LEU n 1 263 ASP n 1 264 GLY n 1 265 PHE n 1 266 LEU n 1 267 SER n 1 268 TYR n 1 269 SER n 1 270 ALA n 1 271 ALA n 1 272 LEU n 1 273 ALA n 1 274 ALA n 1 275 CYS n 1 276 GLN n 1 277 ILE n 1 278 ALA n 1 279 PRO n 1 280 ALA n 1 281 VAL n 1 282 ARG n 1 283 PRO n 1 284 TYR n 1 285 LEU n 1 286 ILE n 1 287 PRO n 1 288 SER n 1 289 HIS n 1 290 PHE n 1 291 SER n 1 292 ALA n 1 293 GLU n 1 294 LYS n 1 295 GLY n 1 296 ALA n 1 297 ARG n 1 298 ILE n 1 299 ALA n 1 300 LEU n 1 301 ALA n 1 302 HIS n 1 303 LEU n 1 304 SER n 1 305 MET n 1 306 GLU n 1 307 PRO n 1 308 TYR n 1 309 LEU n 1 310 HIS n 1 311 MET n 1 312 ALA n 1 313 MET n 1 314 ARG n 1 315 LEU n 1 316 GLY n 1 317 GLU n 1 318 GLY n 1 319 SER n 1 320 GLY n 1 321 ALA n 1 322 ALA n 1 323 LEU n 1 324 ALA n 1 325 MET n 1 326 PRO n 1 327 ILE n 1 328 VAL n 1 329 GLU n 1 330 ALA n 1 331 ALA n 1 332 CYS n 1 333 ALA n 1 334 MET n 1 335 PHE n 1 336 HIS n 1 337 ASN n 1 338 MET n 1 339 GLY n 1 340 GLU n 1 341 LEU n 1 342 ALA n 1 343 ALA n 1 344 SER n 1 345 ASN n 1 346 ILE n 1 347 VAL n 1 348 LEU n 1 349 PRO n 1 350 GLU n 1 351 GLY n 1 352 ASN n 1 353 ALA n 1 354 ASN n 1 355 ALA n 1 356 THR n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Salmonella typhimurium' _entity_src_nat.pdbx_ncbi_taxonomy_id 602 _entity_src_nat.genus Salmonella _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code COBT_SALTY _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q05603 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1D0S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 356 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q05603 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 356 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 356 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1D0S _struct_ref_seq_dif.mon_id TYR _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 158 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q05603 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 158 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num 158 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMD non-polymer . 5,6-DIMETHYLBENZIMIDAZOLE ? 'C9 H10 N2' 146.189 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1D0S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.60 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;1.3 M NH4H2PO4/(NH4)2HPO4, 1 MM 5,6-DIMETHYLBENZIMIDAZOLE, 4 % POLYETHYLENEGLYCOL 400, pH 6.0, VAPOR DIFFUSION, HANGING DROP ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 274.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type ENRAF-NONIUS _diffrn_detector.pdbx_collection_date 1998-08-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D0S _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 1.9 _reflns.number_obs 24807 _reflns.number_all 27320 _reflns.percent_possible_obs 90.8 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.6 _reflns.B_iso_Wilson_estimate 19.9 _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.98 _reflns_shell.percent_possible_all 64.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1D0S _refine.ls_number_reflns_obs 19486 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.0 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.172 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2418 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 132 _refine_hist.number_atoms_total 2566 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? t_angle_deg 1.86 ? ? ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_it ? ? ? ? 'X-RAY DIFFRACTION' ? t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1D0S _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.172 _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1D0S _struct.title ;CRYSTAL STRUCTURE OF NICOTINATE MONONUCLEOTIDE : 5,6-DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE (COBT) FROM SALMONELLA TYPHIMURIUM COMPLEXED WITH 5, 6-DIMETHYLBENZIMIDAZOLE ; _struct.pdbx_descriptor 'NICOTINATE MONONUCLEOTIDE:5,6-DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE (E.C.2.4.2.21)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D0S _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'DINUCLEOTIDE-BINDING MOTIF, PHOSPHORIBOSYL TRANSFERASE, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 4 ? ASP A 10 ? LEU A 4 ASP A 10 1 ? 7 HELX_P HELX_P2 2 ASP A 15 ? GLY A 28 ? ASP A 15 GLY A 28 1 ? 14 HELX_P HELX_P3 3 GLY A 37 ? GLY A 48 ? GLY A 37 GLY A 48 1 ? 12 HELX_P HELX_P4 4 MET A 49 ? ASN A 53 ? MET A 49 ASN A 53 5 ? 5 HELX_P HELX_P5 5 GLY A 71 ? GLY A 76 ? GLY A 71 GLY A 76 5 ? 6 HELX_P HELX_P6 6 ILE A 83 ? ARG A 94 ? ILE A 83 ARG A 94 1 ? 12 HELX_P HELX_P7 7 THR A 97 ? ALA A 106 ? THR A 97 ALA A 106 1 ? 10 HELX_P HELX_P8 8 SER A 144 ? GLN A 164 ? SER A 144 GLN A 164 1 ? 21 HELX_P HELX_P9 9 ASN A 179 ? GLY A 192 ? ASN A 179 GLY A 192 1 ? 14 HELX_P HELX_P10 10 ASP A 194 ? VAL A 199 ? ASP A 194 VAL A 199 1 ? 6 HELX_P HELX_P11 11 PRO A 206 ? SER A 208 ? PRO A 206 SER A 208 5 ? 3 HELX_P HELX_P12 12 ARG A 209 ? GLN A 225 ? ARG A 209 GLN A 225 1 ? 17 HELX_P HELX_P13 13 ASP A 230 ? GLY A 239 ? ASP A 230 GLY A 239 1 ? 10 HELX_P HELX_P14 14 GLY A 240 ? CYS A 256 ? GLY A 240 CYS A 256 1 ? 17 HELX_P HELX_P15 15 GLY A 264 ? ALA A 278 ? GLY A 264 ALA A 278 1 ? 15 HELX_P HELX_P16 16 PRO A 279 ? PRO A 283 ? PRO A 279 PRO A 283 5 ? 5 HELX_P HELX_P17 17 GLY A 295 ? LEU A 303 ? GLY A 295 LEU A 303 1 ? 9 HELX_P HELX_P18 18 GLY A 318 ? MET A 338 ? GLY A 318 MET A 338 1 ? 21 HELX_P HELX_P19 19 LEU A 341 ? ASN A 345 ? LEU A 341 ASN A 345 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 160 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 256 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 160 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 256 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.008 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 126 ? ASN A 127 ? VAL A 126 ASN A 127 A 2 LYS A 109 ? GLY A 116 ? LYS A 109 GLY A 116 A 3 GLU A 60 ? ALA A 68 ? GLU A 60 ALA A 68 A 4 VAL A 167 ? LEU A 175 ? VAL A 167 LEU A 175 A 5 VAL A 260 ? LEU A 261 ? VAL A 260 LEU A 261 A 6 LEU A 285 ? ILE A 286 ? LEU A 285 ILE A 286 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 126 ? N VAL A 126 O VAL A 112 ? O VAL A 112 A 2 3 N LYS A 109 ? N LYS A 109 O LYS A 61 ? O LYS A 61 A 3 4 O GLU A 60 ? O GLU A 60 N THR A 168 ? N THR A 168 A 4 5 O PHE A 170 ? O PHE A 170 N LEU A 261 ? N LEU A 261 A 5 6 O VAL A 260 ? O VAL A 260 N ILE A 286 ? N ILE A 286 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE PO4 A 998' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE DMD A 999' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 ALA A 178 ? ALA A 178 . ? 1_555 ? 2 AC1 10 ASN A 179 ? ASN A 179 . ? 1_555 ? 3 AC1 10 THR A 180 ? THR A 180 . ? 1_555 ? 4 AC1 10 GLY A 202 ? GLY A 202 . ? 1_555 ? 5 AC1 10 ALA A 203 ? ALA A 203 . ? 1_555 ? 6 AC1 10 HOH D . ? HOH A 401 . ? 1_555 ? 7 AC1 10 HOH D . ? HOH A 411 . ? 1_555 ? 8 AC1 10 HOH D . ? HOH A 490 . ? 1_555 ? 9 AC1 10 HOH D . ? HOH A 491 . ? 1_555 ? 10 AC1 10 HOH D . ? HOH A 494 . ? 1_555 ? 11 AC2 8 PRO A 32 ? PRO A 32 . ? 2_665 ? 12 AC2 8 GLN A 88 ? GLN A 88 . ? 1_555 ? 13 AC2 8 LEU A 175 ? LEU A 175 . ? 1_555 ? 14 AC2 8 LEU A 315 ? LEU A 315 . ? 1_555 ? 15 AC2 8 GLU A 317 ? GLU A 317 . ? 1_555 ? 16 AC2 8 LEU A 341 ? LEU A 341 . ? 2_665 ? 17 AC2 8 HOH D . ? HOH A 499 . ? 1_555 ? 18 AC2 8 HOH D . ? HOH A 513 . ? 1_555 ? # _database_PDB_matrix.entry_id 1D0S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1D0S _atom_sites.fract_transf_matrix[1][1] 0.013870 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011086 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021053 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLN 2 2 ? ? ? A . n A 1 3 THR 3 3 ? ? ? A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 HIS 5 5 5 HIS ALA A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 GLN 24 24 24 GLN ALA A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 MET 92 92 92 MET MET A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 CYS 100 100 100 CYS CYS A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 LYS 109 109 109 LYS ALA A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 PRO 121 121 121 PRO PRO A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 CYS 134 134 134 CYS CYS A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 MET 143 143 143 MET MET A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 GLN 147 147 147 GLN GLN A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 SER 156 156 156 SER SER A . n A 1 157 ARG 157 157 157 ARG ALA A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 CYS 160 160 160 CYS CYS A . n A 1 161 ASP 161 161 161 ASP ALA A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 ARG 165 165 165 ARG ALA A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 PHE 170 170 170 PHE PHE A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 MET 177 177 177 MET MET A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 MET 186 186 186 MET MET A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 VAL 189 189 189 VAL VAL A . n A 1 190 PHE 190 190 190 PHE PHE A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 LYS 196 196 196 LYS ALA A . n A 1 197 GLU 197 197 197 GLU ALA A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 ILE 201 201 201 ILE ALA A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 PRO 207 207 207 PRO ALA A . n A 1 208 SER 208 208 208 SER SER A . n A 1 209 ARG 209 209 209 ARG ALA A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 ASN 212 212 212 ASN ASN A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 ASP 215 215 215 ASP ALA A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 ARG 219 219 219 ARG ARG A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 GLN 225 225 225 GLN GLN A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 ASN 227 227 227 ASN ASN A . n A 1 228 PRO 228 228 228 PRO PRO A . n A 1 229 ARG 229 229 229 ARG ALA A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 ILE 232 232 232 ILE ILE A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 VAL 234 234 234 VAL VAL A . n A 1 235 LEU 235 235 235 LEU LEU A . n A 1 236 SER 236 236 236 SER SER A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 PHE 241 241 241 PHE PHE A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 LEU 243 243 243 LEU LEU A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 MET 246 246 246 MET MET A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 VAL 249 249 249 VAL VAL A . n A 1 250 MET 250 250 250 MET MET A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 ALA 254 254 254 ALA ALA A . n A 1 255 ARG 255 255 255 ARG ARG A . n A 1 256 CYS 256 256 256 CYS CYS A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 LEU 258 258 258 LEU LEU A . n A 1 259 PRO 259 259 259 PRO PRO A . n A 1 260 VAL 260 260 260 VAL VAL A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 PHE 265 265 265 PHE PHE A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 SER 267 267 267 SER SER A . n A 1 268 TYR 268 268 268 TYR TYR A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 ALA 273 273 273 ALA ALA A . n A 1 274 ALA 274 274 274 ALA ALA A . n A 1 275 CYS 275 275 275 CYS CYS A . n A 1 276 GLN 276 276 276 GLN GLN A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 PRO 279 279 279 PRO PRO A . n A 1 280 ALA 280 280 280 ALA ALA A . n A 1 281 VAL 281 281 281 VAL VAL A . n A 1 282 ARG 282 282 282 ARG ARG A . n A 1 283 PRO 283 283 283 PRO PRO A . n A 1 284 TYR 284 284 284 TYR TYR A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 ILE 286 286 286 ILE ILE A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 SER 288 288 288 SER SER A . n A 1 289 HIS 289 289 289 HIS HIS A . n A 1 290 PHE 290 290 290 PHE PHE A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 GLU 293 293 293 GLU GLU A . n A 1 294 LYS 294 294 294 LYS LYS A . n A 1 295 GLY 295 295 295 GLY GLY A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 ARG 297 297 297 ARG ALA A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 HIS 302 302 302 HIS HIS A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 SER 304 304 304 SER SER A . n A 1 305 MET 305 305 305 MET MET A . n A 1 306 GLU 306 306 306 GLU ALA A . n A 1 307 PRO 307 307 307 PRO PRO A . n A 1 308 TYR 308 308 308 TYR TYR A . n A 1 309 LEU 309 309 309 LEU LEU A . n A 1 310 HIS 310 310 310 HIS HIS A . n A 1 311 MET 311 311 311 MET MET A . n A 1 312 ALA 312 312 312 ALA ALA A . n A 1 313 MET 313 313 313 MET MET A . n A 1 314 ARG 314 314 314 ARG ARG A . n A 1 315 LEU 315 315 315 LEU LEU A . n A 1 316 GLY 316 316 316 GLY GLY A . n A 1 317 GLU 317 317 317 GLU GLU A . n A 1 318 GLY 318 318 318 GLY GLY A . n A 1 319 SER 319 319 319 SER SER A . n A 1 320 GLY 320 320 320 GLY GLY A . n A 1 321 ALA 321 321 321 ALA ALA A . n A 1 322 ALA 322 322 322 ALA ALA A . n A 1 323 LEU 323 323 323 LEU LEU A . n A 1 324 ALA 324 324 324 ALA ALA A . n A 1 325 MET 325 325 325 MET MET A . n A 1 326 PRO 326 326 326 PRO PRO A . n A 1 327 ILE 327 327 327 ILE ILE A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 ALA 330 330 330 ALA ALA A . n A 1 331 ALA 331 331 331 ALA ALA A . n A 1 332 CYS 332 332 332 CYS CYS A . n A 1 333 ALA 333 333 333 ALA ALA A . n A 1 334 MET 334 334 334 MET MET A . n A 1 335 PHE 335 335 335 PHE PHE A . n A 1 336 HIS 336 336 336 HIS HIS A . n A 1 337 ASN 337 337 337 ASN ASN A . n A 1 338 MET 338 338 338 MET MET A . n A 1 339 GLY 339 339 339 GLY GLY A . n A 1 340 GLU 340 340 340 GLU GLU A . n A 1 341 LEU 341 341 341 LEU LEU A . n A 1 342 ALA 342 342 342 ALA ALA A . n A 1 343 ALA 343 343 343 ALA ALA A . n A 1 344 SER 344 344 344 SER SER A . n A 1 345 ASN 345 345 345 ASN ASN A . n A 1 346 ILE 346 346 346 ILE ILE A . n A 1 347 VAL 347 347 347 VAL VAL A . n A 1 348 LEU 348 348 348 LEU LEU A . n A 1 349 PRO 349 349 349 PRO PRO A . n A 1 350 GLU 350 350 ? ? ? A . n A 1 351 GLY 351 351 ? ? ? A . n A 1 352 ASN 352 352 ? ? ? A . n A 1 353 ALA 353 353 ? ? ? A . n A 1 354 ASN 354 354 ? ? ? A . n A 1 355 ALA 355 355 ? ? ? A . n A 1 356 THR 356 356 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 998 998 PO4 PI A . C 3 DMD 1 999 999 DMD DMB A . D 4 HOH 1 401 401 HOH WAT A . D 4 HOH 2 402 402 HOH WAT A . D 4 HOH 3 403 403 HOH WAT A . D 4 HOH 4 404 404 HOH WAT A . D 4 HOH 5 405 405 HOH WAT A . D 4 HOH 6 406 406 HOH WAT A . D 4 HOH 7 407 407 HOH WAT A . D 4 HOH 8 408 408 HOH WAT A . D 4 HOH 9 409 409 HOH WAT A . D 4 HOH 10 410 410 HOH WAT A . D 4 HOH 11 411 411 HOH WAT A . D 4 HOH 12 412 412 HOH WAT A . D 4 HOH 13 413 413 HOH WAT A . D 4 HOH 14 414 414 HOH WAT A . D 4 HOH 15 415 415 HOH WAT A . D 4 HOH 16 416 416 HOH WAT A . D 4 HOH 17 417 417 HOH WAT A . D 4 HOH 18 418 418 HOH WAT A . D 4 HOH 19 420 420 HOH WAT A . D 4 HOH 20 422 422 HOH WAT A . D 4 HOH 21 423 423 HOH WAT A . D 4 HOH 22 425 425 HOH WAT A . D 4 HOH 23 427 427 HOH WAT A . D 4 HOH 24 428 428 HOH WAT A . D 4 HOH 25 429 429 HOH WAT A . D 4 HOH 26 430 430 HOH WAT A . D 4 HOH 27 431 431 HOH WAT A . D 4 HOH 28 432 432 HOH WAT A . D 4 HOH 29 433 433 HOH WAT A . D 4 HOH 30 434 434 HOH WAT A . D 4 HOH 31 435 435 HOH WAT A . D 4 HOH 32 439 439 HOH WAT A . D 4 HOH 33 440 440 HOH WAT A . D 4 HOH 34 442 442 HOH WAT A . D 4 HOH 35 443 443 HOH WAT A . D 4 HOH 36 444 444 HOH WAT A . D 4 HOH 37 445 445 HOH WAT A . D 4 HOH 38 446 446 HOH WAT A . D 4 HOH 39 447 447 HOH WAT A . D 4 HOH 40 448 448 HOH WAT A . D 4 HOH 41 449 449 HOH WAT A . D 4 HOH 42 450 450 HOH WAT A . D 4 HOH 43 451 451 HOH WAT A . D 4 HOH 44 452 452 HOH WAT A . D 4 HOH 45 453 453 HOH WAT A . D 4 HOH 46 454 454 HOH WAT A . D 4 HOH 47 455 455 HOH WAT A . D 4 HOH 48 458 458 HOH WAT A . D 4 HOH 49 459 459 HOH WAT A . D 4 HOH 50 460 460 HOH WAT A . D 4 HOH 51 461 461 HOH WAT A . D 4 HOH 52 462 462 HOH WAT A . D 4 HOH 53 463 463 HOH WAT A . D 4 HOH 54 464 464 HOH WAT A . D 4 HOH 55 465 465 HOH WAT A . D 4 HOH 56 466 466 HOH WAT A . D 4 HOH 57 468 468 HOH WAT A . D 4 HOH 58 469 469 HOH WAT A . D 4 HOH 59 470 470 HOH WAT A . D 4 HOH 60 471 471 HOH WAT A . D 4 HOH 61 472 472 HOH WAT A . D 4 HOH 62 473 473 HOH WAT A . D 4 HOH 63 475 475 HOH WAT A . D 4 HOH 64 476 476 HOH WAT A . D 4 HOH 65 477 477 HOH WAT A . D 4 HOH 66 478 478 HOH WAT A . D 4 HOH 67 479 479 HOH WAT A . D 4 HOH 68 480 480 HOH WAT A . D 4 HOH 69 481 481 HOH WAT A . D 4 HOH 70 482 482 HOH WAT A . D 4 HOH 71 483 483 HOH WAT A . D 4 HOH 72 484 484 HOH WAT A . D 4 HOH 73 485 485 HOH WAT A . D 4 HOH 74 486 486 HOH WAT A . D 4 HOH 75 488 488 HOH WAT A . D 4 HOH 76 489 489 HOH WAT A . D 4 HOH 77 490 490 HOH WAT A . D 4 HOH 78 491 491 HOH WAT A . D 4 HOH 79 492 492 HOH WAT A . D 4 HOH 80 494 494 HOH WAT A . D 4 HOH 81 497 497 HOH WAT A . D 4 HOH 82 498 498 HOH WAT A . D 4 HOH 83 499 499 HOH WAT A . D 4 HOH 84 500 500 HOH WAT A . D 4 HOH 85 501 501 HOH WAT A . D 4 HOH 86 502 502 HOH WAT A . D 4 HOH 87 504 504 HOH WAT A . D 4 HOH 88 505 505 HOH WAT A . D 4 HOH 89 506 506 HOH WAT A . D 4 HOH 90 507 507 HOH WAT A . D 4 HOH 91 508 508 HOH WAT A . D 4 HOH 92 509 509 HOH WAT A . D 4 HOH 93 510 510 HOH WAT A . D 4 HOH 94 511 511 HOH WAT A . D 4 HOH 95 512 512 HOH WAT A . D 4 HOH 96 513 513 HOH WAT A . D 4 HOH 97 515 515 HOH WAT A . D 4 HOH 98 516 516 HOH WAT A . D 4 HOH 99 517 517 HOH WAT A . D 4 HOH 100 518 518 HOH WAT A . D 4 HOH 101 519 519 HOH WAT A . D 4 HOH 102 520 520 HOH WAT A . D 4 HOH 103 521 521 HOH WAT A . D 4 HOH 104 522 522 HOH WAT A . D 4 HOH 105 523 523 HOH WAT A . D 4 HOH 106 524 524 HOH WAT A . D 4 HOH 107 525 525 HOH WAT A . D 4 HOH 108 526 526 HOH WAT A . D 4 HOH 109 527 527 HOH WAT A . D 4 HOH 110 528 528 HOH WAT A . D 4 HOH 111 529 529 HOH WAT A . D 4 HOH 112 530 530 HOH WAT A . D 4 HOH 113 531 531 HOH WAT A . D 4 HOH 114 532 532 HOH WAT A . D 4 HOH 115 533 533 HOH WAT A . D 4 HOH 116 534 534 HOH WAT A . D 4 HOH 117 535 535 HOH WAT A . D 4 HOH 118 536 536 HOH WAT A . D 4 HOH 119 537 537 HOH WAT A . D 4 HOH 120 538 538 HOH WAT A . D 4 HOH 121 541 541 HOH WAT A . D 4 HOH 122 542 542 HOH WAT A . D 4 HOH 123 543 543 HOH WAT A . D 4 HOH 124 544 544 HOH WAT A . D 4 HOH 125 545 545 HOH WAT A . D 4 HOH 126 547 547 HOH WAT A . D 4 HOH 127 548 548 HOH WAT A . D 4 HOH 128 549 549 HOH WAT A . D 4 HOH 129 550 550 HOH WAT A . D 4 HOH 130 552 552 HOH WAT A . D 4 HOH 131 554 554 HOH WAT A . D 4 HOH 132 555 555 HOH WAT A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5450 ? 1 MORE -41 ? 1 'SSA (A^2)' 21450 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 72.1000000000 0.0000000000 -1.0000000000 0.0000000000 90.2000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-12-29 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2018-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Experimental preparation' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' exptl_crystal_grow # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 5 'Structure model' '_exptl_crystal_grow.temp' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal FRAMBO 'data collection' . ? 1 XDS 'data reduction' . ? 2 SOLVE phasing . ? 3 TNT refinement . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 459 ? ? O A HOH 532 ? ? 1.82 2 1 O A HOH 531 ? ? O A HOH 532 ? ? 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 17 ? ? OE2 A GLU 17 ? ? 1.322 1.252 0.070 0.011 N 2 1 CD A GLU 40 ? ? OE2 A GLU 40 ? ? 1.321 1.252 0.069 0.011 N 3 1 CD A GLU 75 ? ? OE2 A GLU 75 ? ? 1.321 1.252 0.069 0.011 N 4 1 CD A GLU 293 ? ? OE2 A GLU 293 ? ? 1.328 1.252 0.076 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 38 ? ? CZ A ARG 38 ? ? NH1 A ARG 38 ? ? 123.55 120.30 3.25 0.50 N 2 1 CB A ASP 69 ? ? CG A ASP 69 ? ? OD1 A ASP 69 ? ? 124.50 118.30 6.20 0.90 N 3 1 CB A ASP 69 ? ? CG A ASP 69 ? ? OD2 A ASP 69 ? ? 111.83 118.30 -6.47 0.90 N 4 1 CB A ASP 74 ? ? CG A ASP 74 ? ? OD2 A ASP 74 ? ? 112.64 118.30 -5.66 0.90 N 5 1 CB A ASP 194 ? ? CG A ASP 194 ? ? OD2 A ASP 194 ? ? 112.81 118.30 -5.49 0.90 N 6 1 N A PRO 207 ? ? CA A PRO 207 ? ? CB A PRO 207 ? ? 110.65 103.30 7.35 1.20 N 7 1 CB A ASP 211 ? ? CG A ASP 211 ? ? OD2 A ASP 211 ? ? 112.87 118.30 -5.43 0.90 N 8 1 NE A ARG 219 ? ? CZ A ARG 219 ? ? NH1 A ARG 219 ? ? 123.41 120.30 3.11 0.50 N 9 1 CB A ASP 233 ? ? CG A ASP 233 ? ? OD1 A ASP 233 ? ? 124.53 118.30 6.23 0.90 N 10 1 CB A ASP 263 ? ? CG A ASP 263 ? ? OD1 A ASP 263 ? ? 124.78 118.30 6.48 0.90 N 11 1 CB A ASP 263 ? ? CG A ASP 263 ? ? OD2 A ASP 263 ? ? 112.58 118.30 -5.72 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 30 ? ? -60.41 64.94 2 1 ASP A 263 ? ? -113.36 -110.02 3 1 SER A 288 ? ? -116.19 -78.58 4 1 ARG A 314 ? ? -155.32 36.99 5 1 GLU A 317 ? ? 73.20 -7.72 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 5 ? CG ? A HIS 5 CG 2 1 Y 1 A HIS 5 ? ND1 ? A HIS 5 ND1 3 1 Y 1 A HIS 5 ? CD2 ? A HIS 5 CD2 4 1 Y 1 A HIS 5 ? CE1 ? A HIS 5 CE1 5 1 Y 1 A HIS 5 ? NE2 ? A HIS 5 NE2 6 1 Y 1 A GLN 24 ? CG ? A GLN 24 CG 7 1 Y 1 A GLN 24 ? CD ? A GLN 24 CD 8 1 Y 1 A GLN 24 ? OE1 ? A GLN 24 OE1 9 1 Y 1 A GLN 24 ? NE2 ? A GLN 24 NE2 10 1 Y 1 A LYS 109 ? CG ? A LYS 109 CG 11 1 Y 1 A LYS 109 ? CD ? A LYS 109 CD 12 1 Y 1 A LYS 109 ? CE ? A LYS 109 CE 13 1 Y 1 A LYS 109 ? NZ ? A LYS 109 NZ 14 1 Y 1 A ARG 157 ? CG ? A ARG 157 CG 15 1 Y 1 A ARG 157 ? CD ? A ARG 157 CD 16 1 Y 1 A ARG 157 ? NE ? A ARG 157 NE 17 1 Y 1 A ARG 157 ? CZ ? A ARG 157 CZ 18 1 Y 1 A ARG 157 ? NH1 ? A ARG 157 NH1 19 1 Y 1 A ARG 157 ? NH2 ? A ARG 157 NH2 20 1 Y 1 A ASP 161 ? CG ? A ASP 161 CG 21 1 Y 1 A ASP 161 ? OD1 ? A ASP 161 OD1 22 1 Y 1 A ASP 161 ? OD2 ? A ASP 161 OD2 23 1 Y 1 A ARG 165 ? CG ? A ARG 165 CG 24 1 Y 1 A ARG 165 ? CD ? A ARG 165 CD 25 1 Y 1 A ARG 165 ? NE ? A ARG 165 NE 26 1 Y 1 A ARG 165 ? CZ ? A ARG 165 CZ 27 1 Y 1 A ARG 165 ? NH1 ? A ARG 165 NH1 28 1 Y 1 A ARG 165 ? NH2 ? A ARG 165 NH2 29 1 Y 1 A LYS 196 ? CG ? A LYS 196 CG 30 1 Y 1 A LYS 196 ? CD ? A LYS 196 CD 31 1 Y 1 A LYS 196 ? CE ? A LYS 196 CE 32 1 Y 1 A LYS 196 ? NZ ? A LYS 196 NZ 33 1 Y 1 A GLU 197 ? CG ? A GLU 197 CG 34 1 Y 1 A GLU 197 ? CD ? A GLU 197 CD 35 1 Y 1 A GLU 197 ? OE1 ? A GLU 197 OE1 36 1 Y 1 A GLU 197 ? OE2 ? A GLU 197 OE2 37 1 Y 1 A ILE 201 ? CG1 ? A ILE 201 CG1 38 1 Y 1 A ILE 201 ? CG2 ? A ILE 201 CG2 39 1 Y 1 A ILE 201 ? CD1 ? A ILE 201 CD1 40 1 Y 1 A PRO 207 ? CG ? A PRO 207 CG 41 1 Y 1 A PRO 207 ? CD ? A PRO 207 CD 42 1 Y 1 A ARG 209 ? CG ? A ARG 209 CG 43 1 Y 1 A ARG 209 ? CD ? A ARG 209 CD 44 1 Y 1 A ARG 209 ? NE ? A ARG 209 NE 45 1 Y 1 A ARG 209 ? CZ ? A ARG 209 CZ 46 1 Y 1 A ARG 209 ? NH1 ? A ARG 209 NH1 47 1 Y 1 A ARG 209 ? NH2 ? A ARG 209 NH2 48 1 Y 1 A ASP 215 ? CG ? A ASP 215 CG 49 1 Y 1 A ASP 215 ? OD1 ? A ASP 215 OD1 50 1 Y 1 A ASP 215 ? OD2 ? A ASP 215 OD2 51 1 Y 1 A ARG 229 ? CG ? A ARG 229 CG 52 1 Y 1 A ARG 229 ? CD ? A ARG 229 CD 53 1 Y 1 A ARG 229 ? NE ? A ARG 229 NE 54 1 Y 1 A ARG 229 ? CZ ? A ARG 229 CZ 55 1 Y 1 A ARG 229 ? NH1 ? A ARG 229 NH1 56 1 Y 1 A ARG 229 ? NH2 ? A ARG 229 NH2 57 1 Y 1 A ARG 297 ? CG ? A ARG 297 CG 58 1 Y 1 A ARG 297 ? CD ? A ARG 297 CD 59 1 Y 1 A ARG 297 ? NE ? A ARG 297 NE 60 1 Y 1 A ARG 297 ? CZ ? A ARG 297 CZ 61 1 Y 1 A ARG 297 ? NH1 ? A ARG 297 NH1 62 1 Y 1 A ARG 297 ? NH2 ? A ARG 297 NH2 63 1 Y 1 A GLU 306 ? CG ? A GLU 306 CG 64 1 Y 1 A GLU 306 ? CD ? A GLU 306 CD 65 1 Y 1 A GLU 306 ? OE1 ? A GLU 306 OE1 66 1 Y 1 A GLU 306 ? OE2 ? A GLU 306 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLN 2 ? A GLN 2 3 1 Y 1 A THR 3 ? A THR 3 4 1 Y 1 A GLU 350 ? A GLU 350 5 1 Y 1 A GLY 351 ? A GLY 351 6 1 Y 1 A ASN 352 ? A ASN 352 7 1 Y 1 A ALA 353 ? A ALA 353 8 1 Y 1 A ASN 354 ? A ASN 354 9 1 Y 1 A ALA 355 ? A ALA 355 10 1 Y 1 A THR 356 ? A THR 356 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 5,6-DIMETHYLBENZIMIDAZOLE DMD 4 water HOH #