data_1D83
#
_entry.id 1D83
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.392
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1D83 pdb_00001d83 10.2210/pdb1d83/pdb
WWPDB D_1000172681 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 1993-07-15
2 'Structure model' 1 1 2008-03-24
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2020-07-29
5 'Structure model' 3 0 2023-08-02
6 'Structure model' 3 1 2024-05-22
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' Advisory
4 4 'Structure model' 'Atomic model'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Derived calculations'
7 4 'Structure model' Other
8 4 'Structure model' 'Structure summary'
9 5 'Structure model' 'Atomic model'
10 5 'Structure model' 'Database references'
11 5 'Structure model' 'Derived calculations'
12 5 'Structure model' 'Structure summary'
13 6 'Structure model' 'Data collection'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' chem_comp
3 4 'Structure model' entity
4 4 'Structure model' pdbx_branch_scheme
5 4 'Structure model' pdbx_chem_comp_identifier
6 4 'Structure model' pdbx_database_status
7 4 'Structure model' pdbx_entity_branch
8 4 'Structure model' pdbx_entity_branch_descriptor
9 4 'Structure model' pdbx_entity_branch_link
10 4 'Structure model' pdbx_entity_branch_list
11 4 'Structure model' pdbx_entity_nonpoly
12 4 'Structure model' pdbx_nonpoly_scheme
13 4 'Structure model' pdbx_struct_assembly
14 4 'Structure model' pdbx_struct_conn_angle
15 4 'Structure model' pdbx_struct_oper_list
16 4 'Structure model' pdbx_unobs_or_zero_occ_atoms
17 4 'Structure model' struct_asym
18 4 'Structure model' struct_conn
19 4 'Structure model' struct_site
20 4 'Structure model' struct_site_gen
21 5 'Structure model' atom_site
22 5 'Structure model' chem_comp
23 5 'Structure model' database_2
24 5 'Structure model' struct_conn
25 6 'Structure model' chem_comp_atom
26 6 'Structure model' chem_comp_bond
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.B_iso_or_equiv'
2 4 'Structure model' '_atom_site.Cartn_x'
3 4 'Structure model' '_atom_site.Cartn_y'
4 4 'Structure model' '_atom_site.Cartn_z'
5 4 'Structure model' '_atom_site.auth_asym_id'
6 4 'Structure model' '_atom_site.auth_atom_id'
7 4 'Structure model' '_atom_site.auth_comp_id'
8 4 'Structure model' '_atom_site.auth_seq_id'
9 4 'Structure model' '_atom_site.label_asym_id'
10 4 'Structure model' '_atom_site.label_atom_id'
11 4 'Structure model' '_atom_site.label_comp_id'
12 4 'Structure model' '_atom_site.label_entity_id'
13 4 'Structure model' '_atom_site.type_symbol'
14 4 'Structure model' '_chem_comp.mon_nstd_flag'
15 4 'Structure model' '_chem_comp.name'
16 4 'Structure model' '_chem_comp.type'
17 4 'Structure model' '_pdbx_database_status.process_site'
18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
27 4 'Structure model' '_pdbx_struct_conn_angle.value'
28 4 'Structure model' '_struct_conn.conn_type_id'
29 4 'Structure model' '_struct_conn.id'
30 4 'Structure model' '_struct_conn.pdbx_dist_value'
31 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
32 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
33 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
34 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
35 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
36 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
37 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
38 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
39 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
40 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
41 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
42 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
43 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
44 5 'Structure model' '_atom_site.B_iso_or_equiv'
45 5 'Structure model' '_atom_site.Cartn_x'
46 5 'Structure model' '_atom_site.Cartn_y'
47 5 'Structure model' '_atom_site.Cartn_z'
48 5 'Structure model' '_atom_site.auth_atom_id'
49 5 'Structure model' '_atom_site.label_atom_id'
50 5 'Structure model' '_chem_comp.pdbx_synonyms'
51 5 'Structure model' '_database_2.pdbx_DOI'
52 5 'Structure model' '_database_2.pdbx_database_accession'
53 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1D83
_pdbx_database_status.recvd_initial_deposition_date 1992-07-22
_pdbx_database_status.deposit_site ?
_pdbx_database_status.process_site BNL
_pdbx_database_status.SG_entry .
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Gao, X.' 1
'Mirau, P.' 2
'Patel, D.J.' 3
#
_citation.id primary
_citation.title 'Structure refinement of the chromomycin dimer-DNA oligomer complex in solution.'
_citation.journal_abbrev J.Mol.Biol.
_citation.journal_volume 223
_citation.page_first 259
_citation.page_last 279
_citation.year 1992
_citation.journal_id_ASTM JMOBAK
_citation.country UK
_citation.journal_id_ISSN 0022-2836
_citation.journal_id_CSD 0070
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 1731073
_citation.pdbx_database_id_DOI '10.1016/0022-2836(92)90730-8'
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Gao, X.L.' 1 ?
primary 'Mirau, P.' 2 ?
primary 'Patel, D.J.' 3 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer syn
;DNA (5'-D(*AP*AP*GP*GP*CP*CP*TP*T)-3')
;
2426.617 2 ? ? ? ?
2 branched man
;3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol
;
432.506 2 ? ? ? ?
3 branched man
'2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate' 318.363 2 ?
? ? ?
4 non-polymer syn
'(1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose' 420.410
2 ? ? ? ?
5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ?
#
_entity_keywords.entity_id 1
_entity_keywords.text 'DEOXYRIBONUCLEIC ACID'
#
_entity_poly.entity_id 1
_entity_poly.type polydeoxyribonucleotide
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code '(DA)(DA)(DG)(DG)(DC)(DC)(DT)(DT)'
_entity_poly.pdbx_seq_one_letter_code_can AAGGCCTT
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 '(1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose' CPH
5 'MAGNESIUM ION' MG
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 DA n
1 2 DA n
1 3 DG n
1 4 DG n
1 5 DC n
1 6 DC n
1 7 DT n
1 8 DT n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'CHEMICALY SYNTHESIZED'
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide
3 oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 'WURCS=2.0/2,3,2/[ad222m-1b_1-5][ad611m-1a_1-5_3*C_4*OCC/3=O]/1-1-2/a3-b1_b3-c1' WURCS PDB2Glycan 1.1.0
2 2 '[][b-D-2,6-deoxy-Glcp]{[(3+1)][b-D-2,6-deoxy-Glcp]{[(3+1)][a-L-2,6-deoxy-Glcp4Ac]{}}}' LINUCS PDB-CARE ?
3 3 'WURCS=2.0/2,2,1/[ad212m-1b_1-5_4*OCC/3=O][ad112m-1a_1-5_4*OC]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0
4 3 '[][b-D-2-deoxy-Fucp4Ac]{[(3+1)][a-D-2-deoxy-Fucp4Me]{}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 1 CDR C3 H3 2 CDR O1 HO1 sing ?
2 2 2 CDR C3 H3 3 ERI O1 HO1 sing ?
3 3 1 ARI C3 H3 2 1GL O1 HO1 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
1GL 'D-saccharide, alpha linking' . 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose
;4-O-METHYL-2,6-DIDEOXY-ALPHA-D-GALACTO-HEXOPYRANOSE; 2-deoxy-4-O-methyl-alpha-D-fucopyranose; 2,6-dideoxy-4-O-methyl-alpha-D-galactose; 2,6-dideoxy-4-O-methyl-D-galactose; 2,6-dideoxy-4-O-methyl-galactose
;
'C7 H14 O4' 162.184
ARI 'D-saccharide, beta linking' . '(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate'
'[O4]-ACETOXY-2,3-DIDEOXYFUCOSE' 'C8 H14 O4' 174.194
CDR 'D-saccharide, beta linking' . '(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol' 2,3-DIDEOXYFUCOSE 'C6 H12 O3' 132.158
CPH non-polymer .
'(1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose' None
'C21 H24 O9' 420.410
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208
ERI 'L-saccharide, alpha linking' n 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose
;4-O-ACETYL-2,6-DIDEOXY-3-C-METHYL-BETA-L-ARABINO-HEXOPYRANOSE; 3-C-methyl-4-O-acetyl-alpha-L-Olivose; 3-C-methyl-4-O-acetyl-L-Olivose; 3-C-methyl-4-O-acetyl-Olivose
;
'C9 H16 O5' 204.220
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305
#
_pdbx_chem_comp_identifier.comp_id 1GL
_pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL'
_pdbx_chem_comp_identifier.program PDB-CARE
_pdbx_chem_comp_identifier.program_version 1.0
_pdbx_chem_comp_identifier.identifier a-D-2-deoxy-Fucp4OMe
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 DA 1 1 1 DA A A . n
A 1 2 DA 2 2 2 DA A A . n
A 1 3 DG 3 3 3 DG G A . n
A 1 4 DG 4 4 4 DG G A . n
A 1 5 DC 5 5 5 DC C A . n
A 1 6 DC 6 6 6 DC C A . n
A 1 7 DT 7 7 7 DT T A . n
A 1 8 DT 8 8 8 DT T A . n
B 1 1 DA 1 11 11 DA A B . n
B 1 2 DA 2 12 12 DA A B . n
B 1 3 DG 3 13 13 DG G B . n
B 1 4 DG 4 14 14 DG G B . n
B 1 5 DC 5 15 15 DC C B . n
B 1 6 DC 6 16 16 DC C B . n
B 1 7 DT 7 17 17 DT T B . n
B 1 8 DT 8 18 18 DT T B . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 2 CDR 1 C CDR 1 ? CDR 24 n
C 2 CDR 2 C CDR 2 ? CDR 25 n
C 2 ERI 3 C ERI 3 ? ERI 26 n
D 3 ARI 1 D ARI 1 ? ARI 32 n
D 3 1GL 2 D 1GL 2 ? BRI 31 n
E 3 ARI 1 E ARI 1 ? ARI 22 n
E 3 1GL 2 E 1GL 2 ? BRI 21 n
F 2 CDR 1 F CDR 1 ? CDR 34 n
F 2 CDR 2 F CDR 2 ? CDR 35 n
F 2 ERI 3 F ERI 3 ? ERI 36 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 CPH 1 33 33 CPH CPH A .
H 5 MG 1 1 1 MG MG B .
I 4 CPH 1 23 23 CPH CPH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
X-PLOR 'model building' . ? 1
X-PLOR refinement . ? 2
X-PLOR phasing . ? 3
#
_cell.entry_id 1D83
_cell.length_a 1.000
_cell.length_b 1.000
_cell.length_c 1.000
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 1
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1D83
_symmetry.space_group_name_H-M 'P 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 1
#
_exptl.entry_id 1D83
_exptl.method 'SOLUTION NMR'
_exptl.crystals_number ?
#
_database_PDB_matrix.entry_id 1D83
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1D83
_struct.title 'STRUCTURE REFINEMENT OF THE CHROMOMYCIN DIMER/DNA OLIGOMER COMPLEX IN SOLUTION'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1D83
_struct_keywords.pdbx_keywords DNA
_struct_keywords.text 'DNA, DOUBLE HELIX, CHROMOMYCIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 3 ?
E N N 3 ?
F N N 2 ?
G N N 4 ?
H N N 5 ?
I N N 4 ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 1D83
_struct_ref.pdbx_db_accession 1D83
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1D83 A 1 ? 8 ? 1D83 1 ? 8 ? 1 8
2 1 1D83 B 1 ? 8 ? 1D83 11 ? 18 ? 11 18
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale one ? G CPH . C6 ? ? ? 1_555 D ARI . O1 ? ? A CPH 33 D ARI 1 1_555 ? ? ? ? ? ? ? 1.387 ? ?
covale2 covale one ? G CPH . C2 ? ? ? 1_555 F CDR . O1 ? ? A CPH 33 F CDR 1 1_555 ? ? ? ? ? ? ? 1.434 ? ?
covale3 covale one ? I CPH . C2 ? ? ? 1_555 C CDR . O1 ? ? B CPH 23 C CDR 1 1_555 ? ? ? ? ? ? ? 1.434 ? ?
covale4 covale one ? I CPH . C6 ? ? ? 1_555 E ARI . O1 ? ? B CPH 23 E ARI 1 1_555 ? ? ? ? ? ? ? 1.385 ? ?
covale5 covale one ? C CDR . C3 ? ? ? 1_555 C CDR . O1 ? ? C CDR 1 C CDR 2 1_555 ? ? ? ? ? ? ? 1.449 ? ?
covale6 covale one ? C CDR . C3 ? ? ? 1_555 C ERI . O1 ? ? C CDR 2 C ERI 3 1_555 ? ? ? ? ? ? ? 1.437 ? ?
covale7 covale one ? D ARI . C3 ? ? ? 1_555 D 1GL . O1 ? ? D ARI 1 D 1GL 2 1_555 ? ? ? ? ? ? ? 1.446 ? ?
covale8 covale one ? E ARI . C3 ? ? ? 1_555 E 1GL . O1 ? ? E ARI 1 E 1GL 2 1_555 ? ? ? ? ? ? ? 1.445 ? ?
covale9 covale one ? F CDR . C3 ? ? ? 1_555 F CDR . O1 ? ? F CDR 1 F CDR 2 1_555 ? ? ? ? ? ? ? 1.447 ? ?
covale10 covale one ? F CDR . C3 ? ? ? 1_555 F ERI . O1 ? ? F CDR 2 F ERI 3 1_555 ? ? ? ? ? ? ? 1.438 ? ?
metalc1 metalc ? ? G CPH . O1 ? ? ? 1_555 H MG . MG ? ? A CPH 33 B MG 1 1_555 ? ? ? ? ? ? ? 1.890 ? ?
metalc2 metalc ? ? G CPH . O9 ? ? ? 1_555 H MG . MG ? ? A CPH 33 B MG 1 1_555 ? ? ? ? ? ? ? 2.068 ? ?
metalc3 metalc ? ? H MG . MG ? ? ? 1_555 I CPH . O1 ? ? B MG 1 B CPH 23 1_555 ? ? ? ? ? ? ? 1.888 ? ?
metalc4 metalc ? ? H MG . MG ? ? ? 1_555 I CPH . O9 ? ? B MG 1 B CPH 23 1_555 ? ? ? ? ? ? ? 1.953 ? ?
hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 1 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 1 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 2 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 2 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 3 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 3 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 3 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 4 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 4 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 4 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 5 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 5 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 5 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 6 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 6 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 6 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 7 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 7 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 1 N1 ? ? A DT 8 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 1 N6 ? ? A DT 8 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
hydrog ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O1 ? G CPH . ? A CPH 33 ? 1_555 MG ? H MG . ? B MG 1 ? 1_555 O9 ? G CPH . ? A CPH 33 ? 1_555 76.7 ?
2 O1 ? G CPH . ? A CPH 33 ? 1_555 MG ? H MG . ? B MG 1 ? 1_555 O1 ? I CPH . ? B CPH 23 ? 1_555 108.8 ?
3 O9 ? G CPH . ? A CPH 33 ? 1_555 MG ? H MG . ? B MG 1 ? 1_555 O1 ? I CPH . ? B CPH 23 ? 1_555 105.3 ?
4 O1 ? G CPH . ? A CPH 33 ? 1_555 MG ? H MG . ? B MG 1 ? 1_555 O9 ? I CPH . ? B CPH 23 ? 1_555 109.5 ?
5 O9 ? G CPH . ? A CPH 33 ? 1_555 MG ? H MG . ? B MG 1 ? 1_555 O9 ? I CPH . ? B CPH 23 ? 1_555 170.1 ?
6 O1 ? I CPH . ? B CPH 23 ? 1_555 MG ? H MG . ? B MG 1 ? 1_555 O9 ? I CPH . ? B CPH 23 ? 1_555 80.4 ?
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 H22 B DG 14 ? ? HO8 B CPH 23 ? ? 1.19
2 1 H22 A DG 4 ? ? HO8 A CPH 33 ? ? 1.20
3 1 H22 A DG 4 ? ? O8 A CPH 33 ? ? 1.56
4 1 H22 B DG 14 ? ? O8 B CPH 23 ? ? 1.56
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 "C5'" A DA 1 ? ? "C4'" A DA 1 ? ? 1.558 1.512 0.046 0.007 N
2 1 "C2'" A DA 1 ? ? "C1'" A DA 1 ? ? 1.604 1.519 0.085 0.010 N
3 1 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? 1.486 1.420 0.066 0.011 N
4 1 "O4'" A DA 1 ? ? "C4'" A DA 1 ? ? 1.503 1.449 0.054 0.009 N
5 1 C6 A DA 1 ? ? N1 A DA 1 ? ? 1.303 1.351 -0.048 0.007 N
6 1 C8 A DA 1 ? ? N9 A DA 1 ? ? 1.294 1.373 -0.079 0.008 N
7 1 N9 A DA 1 ? ? C4 A DA 1 ? ? 1.419 1.374 0.045 0.006 N
8 1 "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? 1.555 1.512 0.043 0.007 N
9 1 C5 A DA 2 ? ? N7 A DA 2 ? ? 1.427 1.388 0.039 0.006 N
10 1 N9 A DA 2 ? ? C4 A DA 2 ? ? 1.422 1.374 0.048 0.006 N
11 1 "C4'" A DG 3 ? ? "C3'" A DG 3 ? ? 1.603 1.529 0.074 0.010 N
12 1 "C2'" A DG 3 ? ? "C1'" A DG 3 ? ? 1.691 1.519 0.172 0.010 N
13 1 "O3'" A DG 3 ? ? P A DG 4 ? ? 1.688 1.607 0.081 0.012 Y
14 1 P A DG 4 ? ? "O5'" A DG 4 ? ? 1.680 1.593 0.087 0.010 N
15 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 1.589 1.529 0.060 0.010 N
16 1 N3 A DG 4 ? ? C4 A DG 4 ? ? 1.484 1.350 0.134 0.007 N
17 1 C5 A DG 4 ? ? N7 A DG 4 ? ? 1.428 1.388 0.040 0.006 N
18 1 C8 A DG 4 ? ? N9 A DG 4 ? ? 1.423 1.374 0.049 0.007 N
19 1 N9 A DG 4 ? ? C4 A DG 4 ? ? 1.463 1.375 0.088 0.008 N
20 1 "C5'" A DC 5 ? ? "C4'" A DC 5 ? ? 1.570 1.512 0.058 0.007 N
21 1 "C5'" A DC 6 ? ? "C4'" A DC 6 ? ? 1.575 1.512 0.063 0.007 N
22 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? 1.493 1.420 0.073 0.011 N
23 1 "O4'" A DC 6 ? ? "C4'" A DC 6 ? ? 1.507 1.449 0.058 0.009 N
24 1 "C5'" A DT 7 ? ? "C4'" A DT 7 ? ? 1.637 1.512 0.125 0.007 N
25 1 "C3'" A DT 7 ? ? "C2'" A DT 7 ? ? 1.600 1.518 0.082 0.012 N
26 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? 1.487 1.420 0.067 0.011 N
27 1 C4 A DT 7 ? ? C5 A DT 7 ? ? 1.501 1.445 0.056 0.009 N
28 1 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.643 1.496 0.147 0.006 N
29 1 "C5'" B DA 11 ? ? "C4'" B DA 11 ? ? 1.557 1.512 0.045 0.007 N
30 1 "C2'" B DA 11 ? ? "C1'" B DA 11 ? ? 1.603 1.519 0.084 0.010 N
31 1 "O4'" B DA 11 ? ? "C1'" B DA 11 ? ? 1.486 1.420 0.066 0.011 N
32 1 "O4'" B DA 11 ? ? "C4'" B DA 11 ? ? 1.503 1.449 0.054 0.009 N
33 1 C6 B DA 11 ? ? N1 B DA 11 ? ? 1.302 1.351 -0.049 0.007 N
34 1 C8 B DA 11 ? ? N9 B DA 11 ? ? 1.295 1.373 -0.078 0.008 N
35 1 N9 B DA 11 ? ? C4 B DA 11 ? ? 1.417 1.374 0.043 0.006 N
36 1 "C5'" B DA 12 ? ? "C4'" B DA 12 ? ? 1.559 1.512 0.047 0.007 N
37 1 C5 B DA 12 ? ? C6 B DA 12 ? ? 1.460 1.406 0.054 0.009 N
38 1 C5 B DA 12 ? ? N7 B DA 12 ? ? 1.426 1.388 0.038 0.006 N
39 1 N9 B DA 12 ? ? C4 B DA 12 ? ? 1.420 1.374 0.046 0.006 N
40 1 "C4'" B DG 13 ? ? "C3'" B DG 13 ? ? 1.604 1.529 0.075 0.010 N
41 1 "C2'" B DG 13 ? ? "C1'" B DG 13 ? ? 1.684 1.519 0.165 0.010 N
42 1 "O3'" B DG 13 ? ? P B DG 14 ? ? 1.688 1.607 0.081 0.012 Y
43 1 P B DG 14 ? ? "O5'" B DG 14 ? ? 1.681 1.593 0.088 0.010 N
44 1 "C4'" B DG 14 ? ? "C3'" B DG 14 ? ? 1.611 1.529 0.082 0.010 N
45 1 N3 B DG 14 ? ? C4 B DG 14 ? ? 1.487 1.350 0.137 0.007 N
46 1 C5 B DG 14 ? ? N7 B DG 14 ? ? 1.428 1.388 0.040 0.006 N
47 1 N9 B DG 14 ? ? C4 B DG 14 ? ? 1.463 1.375 0.088 0.008 N
48 1 "C5'" B DC 15 ? ? "C4'" B DC 15 ? ? 1.567 1.512 0.055 0.007 N
49 1 "C5'" B DC 16 ? ? "C4'" B DC 16 ? ? 1.577 1.512 0.065 0.007 N
50 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? 1.490 1.420 0.070 0.011 N
51 1 "O4'" B DC 16 ? ? "C4'" B DC 16 ? ? 1.505 1.449 0.056 0.009 N
52 1 "C5'" B DT 17 ? ? "C4'" B DT 17 ? ? 1.632 1.512 0.120 0.007 N
53 1 "C3'" B DT 17 ? ? "C2'" B DT 17 ? ? 1.594 1.518 0.076 0.012 N
54 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? 1.486 1.420 0.066 0.011 N
55 1 C5 B DT 17 ? ? C7 B DT 17 ? ? 1.647 1.496 0.151 0.006 N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 "C1'" A DA 1 ? ? "O4'" A DA 1 ? ? "C4'" A DA 1 ? ? 115.48 110.30 5.18 0.70 N
2 1 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? "C2'" A DA 1 ? ? 97.22 105.90 -8.68 0.80 N
3 1 "O4'" A DA 1 ? ? "C1'" A DA 1 ? ? N9 A DA 1 ? ? 123.09 108.30 14.79 0.30 N
4 1 N1 A DA 1 ? ? C2 A DA 1 ? ? N3 A DA 1 ? ? 133.75 129.30 4.45 0.50 N
5 1 C5 A DA 1 ? ? N7 A DA 1 ? ? C8 A DA 1 ? ? 98.53 103.90 -5.37 0.50 N
6 1 N7 A DA 1 ? ? C8 A DA 1 ? ? N9 A DA 1 ? ? 125.48 113.80 11.68 0.50 N
7 1 C8 A DA 1 ? ? N9 A DA 1 ? ? C4 A DA 1 ? ? 98.47 105.80 -7.33 0.40 N
8 1 C4 A DA 1 ? ? N9 A DA 1 ? ? "C1'" A DA 1 ? ? 138.06 126.30 11.76 1.80 N
9 1 "C5'" A DA 2 ? ? "C4'" A DA 2 ? ? "O4'" A DA 2 ? ? 117.25 109.80 7.45 1.10 N
10 1 "C4'" A DA 2 ? ? "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? 85.79 109.70 -23.91 2.50 N
11 1 N9 A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 123.03 114.30 8.73 1.40 N
12 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 121.79 108.30 13.49 0.30 N
13 1 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 112.61 118.60 -5.99 0.60 N
14 1 C5 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 129.12 123.70 5.42 0.80 N
15 1 "C3'" A DA 2 ? ? "O3'" A DA 2 ? ? P A DG 3 ? ? 133.45 119.70 13.75 1.20 Y
16 1 "C3'" A DG 3 ? ? "C2'" A DG 3 ? ? "C1'" A DG 3 ? ? 111.75 102.50 9.25 1.20 N
17 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? "C2'" A DG 3 ? ? 95.70 105.90 -10.20 0.80 N
18 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 120.19 108.30 11.89 0.30 N
19 1 C5 A DG 3 ? ? N7 A DG 3 ? ? C8 A DG 3 ? ? 101.21 104.30 -3.09 0.50 N
20 1 N7 A DG 3 ? ? C8 A DG 3 ? ? N9 A DG 3 ? ? 119.40 113.10 6.30 0.50 N
21 1 C8 A DG 3 ? ? N9 A DG 3 ? ? C4 A DG 3 ? ? 100.51 106.40 -5.89 0.40 N
22 1 C8 A DG 3 ? ? N9 A DG 3 ? ? "C1'" A DG 3 ? ? 135.10 127.00 8.10 1.30 N
23 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 127.05 119.70 7.35 1.20 Y
24 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? "C2'" A DG 4 ? ? 109.89 106.80 3.09 0.50 N
25 1 N9 A DG 4 ? ? "C1'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.55 112.60 -15.05 1.90 N
26 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.76 108.30 4.46 0.30 N
27 1 C2 A DG 4 ? ? N3 A DG 4 ? ? C4 A DG 4 ? ? 108.01 111.90 -3.89 0.50 N
28 1 C4 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 113.83 110.80 3.03 0.40 N
29 1 C5 A DG 4 ? ? N7 A DG 4 ? ? C8 A DG 4 ? ? 107.96 104.30 3.66 0.50 N
30 1 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 107.45 113.10 -5.65 0.50 N
31 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 111.90 106.40 5.50 0.40 N
32 1 N9 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 98.83 105.40 -6.57 0.40 N
33 1 N3 A DG 4 ? ? C4 A DG 4 ? ? N9 A DG 4 ? ? 133.10 126.00 7.10 0.60 N
34 1 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 100.98 104.50 -3.52 0.40 N
35 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? "C2'" A DC 5 ? ? 100.46 105.90 -5.44 0.80 N
36 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 119.79 108.30 11.49 0.30 N
37 1 "C1'" A DC 6 ? ? "O4'" A DC 6 ? ? "C4'" A DC 6 ? ? 115.86 110.30 5.56 0.70 N
38 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? "C2'" A DC 6 ? ? 95.53 105.90 -10.37 0.80 N
39 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 117.89 108.30 9.59 0.30 N
40 1 N3 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 124.69 118.00 6.69 0.70 N
41 1 C5 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 114.75 120.20 -5.45 0.70 N
42 1 "C1'" A DT 7 ? ? "O4'" A DT 7 ? ? "C4'" A DT 7 ? ? 117.94 110.30 7.64 0.70 N
43 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? "C2'" A DT 7 ? ? 100.79 105.90 -5.11 0.80 N
44 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 118.03 108.30 9.73 0.30 N
45 1 N3 A DT 7 ? ? C4 A DT 7 ? ? O4 A DT 7 ? ? 114.89 119.90 -5.01 0.60 N
46 1 C5 A DT 7 ? ? C4 A DT 7 ? ? O4 A DT 7 ? ? 130.59 124.90 5.69 0.70 N
47 1 C4 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 125.22 119.00 6.22 0.60 N
48 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 117.32 122.90 -5.58 0.60 N
49 1 "C5'" A DT 8 ? ? "C4'" A DT 8 ? ? "C3'" A DT 8 ? ? 123.85 115.70 8.15 1.20 N
50 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 129.37 108.30 21.07 0.30 N
51 1 C4 A DT 8 ? ? C5 A DT 8 ? ? C6 A DT 8 ? ? 122.23 118.00 4.23 0.60 N
52 1 C5 A DT 8 ? ? C6 A DT 8 ? ? N1 A DT 8 ? ? 119.15 123.70 -4.55 0.60 N
53 1 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.77 122.90 -4.13 0.60 N
54 1 "C1'" B DA 11 ? ? "O4'" B DA 11 ? ? "C4'" B DA 11 ? ? 115.46 110.30 5.16 0.70 N
55 1 "O4'" B DA 11 ? ? "C1'" B DA 11 ? ? "C2'" B DA 11 ? ? 97.27 105.90 -8.63 0.80 N
56 1 "O4'" B DA 11 ? ? "C1'" B DA 11 ? ? N9 B DA 11 ? ? 123.08 108.30 14.78 0.30 N
57 1 N1 B DA 11 ? ? C2 B DA 11 ? ? N3 B DA 11 ? ? 134.08 129.30 4.78 0.50 N
58 1 C5 B DA 11 ? ? N7 B DA 11 ? ? C8 B DA 11 ? ? 98.52 103.90 -5.38 0.50 N
59 1 N7 B DA 11 ? ? C8 B DA 11 ? ? N9 B DA 11 ? ? 125.43 113.80 11.63 0.50 N
60 1 C8 B DA 11 ? ? N9 B DA 11 ? ? C4 B DA 11 ? ? 98.46 105.80 -7.34 0.40 N
61 1 C4 B DA 11 ? ? N9 B DA 11 ? ? "C1'" B DA 11 ? ? 138.16 126.30 11.86 1.80 N
62 1 "C5'" B DA 12 ? ? "C4'" B DA 12 ? ? "O4'" B DA 12 ? ? 116.76 109.80 6.96 1.10 N
63 1 "C4'" B DA 12 ? ? "C3'" B DA 12 ? ? "O3'" B DA 12 ? ? 85.35 109.70 -24.35 2.50 N
64 1 N9 B DA 12 ? ? "C1'" B DA 12 ? ? "C2'" B DA 12 ? ? 123.45 114.30 9.15 1.40 N
65 1 "O4'" B DA 12 ? ? "C1'" B DA 12 ? ? N9 B DA 12 ? ? 121.94 108.30 13.64 0.30 N
66 1 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 112.43 118.60 -6.17 0.60 N
67 1 C5 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 129.09 123.70 5.39 0.80 N
68 1 "C3'" B DA 12 ? ? "O3'" B DA 12 ? ? P B DG 13 ? ? 133.80 119.70 14.10 1.20 Y
69 1 "C3'" B DG 13 ? ? "C2'" B DG 13 ? ? "C1'" B DG 13 ? ? 111.70 102.50 9.20 1.20 N
70 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? "C2'" B DG 13 ? ? 96.17 105.90 -9.73 0.80 N
71 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 120.71 108.30 12.41 0.30 N
72 1 C5 B DG 13 ? ? N7 B DG 13 ? ? C8 B DG 13 ? ? 100.79 104.30 -3.51 0.50 N
73 1 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 120.27 113.10 7.17 0.50 N
74 1 C8 B DG 13 ? ? N9 B DG 13 ? ? C4 B DG 13 ? ? 100.15 106.40 -6.25 0.40 N
75 1 "C3'" B DG 13 ? ? "O3'" B DG 13 ? ? P B DG 14 ? ? 127.04 119.70 7.34 1.20 Y
76 1 "O4'" B DG 14 ? ? "C4'" B DG 14 ? ? "C3'" B DG 14 ? ? 101.93 104.50 -2.57 0.40 N
77 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 110.13 106.80 3.33 0.50 N
78 1 N9 B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 97.46 112.60 -15.14 1.90 N
79 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 113.59 108.30 5.29 0.30 N
80 1 C2 B DG 14 ? ? N3 B DG 14 ? ? C4 B DG 14 ? ? 107.75 111.90 -4.15 0.50 N
81 1 C4 B DG 14 ? ? C5 B DG 14 ? ? N7 B DG 14 ? ? 113.83 110.80 3.03 0.40 N
82 1 C5 B DG 14 ? ? N7 B DG 14 ? ? C8 B DG 14 ? ? 107.66 104.30 3.36 0.50 N
83 1 N7 B DG 14 ? ? C8 B DG 14 ? ? N9 B DG 14 ? ? 107.84 113.10 -5.26 0.50 N
84 1 C8 B DG 14 ? ? N9 B DG 14 ? ? C4 B DG 14 ? ? 111.90 106.40 5.50 0.40 N
85 1 N9 B DG 14 ? ? C4 B DG 14 ? ? C5 B DG 14 ? ? 98.75 105.40 -6.65 0.40 N
86 1 N3 B DG 14 ? ? C4 B DG 14 ? ? N9 B DG 14 ? ? 133.10 126.00 7.10 0.60 N
87 1 "O4'" B DC 15 ? ? "C4'" B DC 15 ? ? "C3'" B DC 15 ? ? 101.09 104.50 -3.41 0.40 N
88 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? "C2'" B DC 15 ? ? 100.51 105.90 -5.39 0.80 N
89 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 119.75 108.30 11.45 0.30 N
90 1 "C1'" B DC 16 ? ? "O4'" B DC 16 ? ? "C4'" B DC 16 ? ? 115.48 110.30 5.18 0.70 N
91 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? "C2'" B DC 16 ? ? 95.81 105.90 -10.09 0.80 N
92 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 117.85 108.30 9.55 0.30 N
93 1 N3 B DC 16 ? ? C4 B DC 16 ? ? N4 B DC 16 ? ? 125.06 118.00 7.06 0.70 N
94 1 C5 B DC 16 ? ? C4 B DC 16 ? ? N4 B DC 16 ? ? 114.85 120.20 -5.35 0.70 N
95 1 "C1'" B DT 17 ? ? "O4'" B DT 17 ? ? "C4'" B DT 17 ? ? 117.65 110.30 7.35 0.70 N
96 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? "C2'" B DT 17 ? ? 100.82 105.90 -5.08 0.80 N
97 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? N1 B DT 17 ? ? 118.22 108.30 9.92 0.30 N
98 1 N3 B DT 17 ? ? C4 B DT 17 ? ? O4 B DT 17 ? ? 115.24 119.90 -4.66 0.60 N
99 1 C5 B DT 17 ? ? C4 B DT 17 ? ? O4 B DT 17 ? ? 130.26 124.90 5.36 0.70 N
100 1 C4 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 125.46 119.00 6.46 0.60 N
101 1 C6 B DT 17 ? ? C5 B DT 17 ? ? C7 B DT 17 ? ? 117.74 122.90 -5.16 0.60 N
102 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1 B DT 18 ? ? 129.39 108.30 21.09 0.30 N
103 1 C4 B DT 18 ? ? C5 B DT 18 ? ? C6 B DT 18 ? ? 122.13 118.00 4.13 0.60 N
104 1 C5 B DT 18 ? ? C6 B DT 18 ? ? N1 B DT 18 ? ? 119.30 123.70 -4.40 0.60 N
105 1 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 118.94 122.90 -3.96 0.60 N
#
loop_
_pdbx_validate_planes.id
_pdbx_validate_planes.PDB_model_num
_pdbx_validate_planes.auth_comp_id
_pdbx_validate_planes.auth_asym_id
_pdbx_validate_planes.auth_seq_id
_pdbx_validate_planes.PDB_ins_code
_pdbx_validate_planes.label_alt_id
_pdbx_validate_planes.rmsd
_pdbx_validate_planes.type
1 1 DA A 1 ? ? 0.098 'SIDE CHAIN'
2 1 DC A 5 ? ? 0.074 'SIDE CHAIN'
3 1 DC A 6 ? ? 0.092 'SIDE CHAIN'
4 1 DA B 11 ? ? 0.099 'SIDE CHAIN'
5 1 DC B 15 ? ? 0.074 'SIDE CHAIN'
6 1 DC B 16 ? ? 0.091 'SIDE CHAIN'
#
_pdbx_nmr_ensemble.entry_id 1D83
_pdbx_nmr_ensemble.conformers_calculated_total_number ?
_pdbx_nmr_ensemble.conformers_submitted_total_number 1
_pdbx_nmr_ensemble.conformer_selection_criteria ?
_pdbx_nmr_ensemble.average_constraints_per_residue ?
_pdbx_nmr_ensemble.average_constraint_violations_per_residue ?
_pdbx_nmr_ensemble.maximum_distance_constraint_violation ?
_pdbx_nmr_ensemble.average_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ?
_pdbx_nmr_ensemble.distance_constraint_violation_method ?
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ?
#
_pdbx_nmr_details.entry_id 1D83
_pdbx_nmr_details.text
;CHROMOMYCIN BINDS AS A MG2 CATION-COORDINATED DIMER. EACH CHROMOMYCIN IS REPRESENTED AS A SET OF SIX HET GROUPS: 1GL - ARI - CPH - CDR - CDR - ERI. THE COORDINATING MG IS PRESENTED AS A SEPARATE HET GROUP.
;
#
_pdbx_nmr_software.name X-PLOR
_pdbx_nmr_software.version ?
_pdbx_nmr_software.classification refinement
_pdbx_nmr_software.authors BRUNGER
_pdbx_nmr_software.ordinal 1
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
1GL O1 O N N 1
1GL C1 C N S 2
1GL C2 C N N 3
1GL C3 C N R 4
1GL O3 O N N 5
1GL C4 C N R 6
1GL O4 O N N 7
1GL CME C N N 8
1GL C5 C N R 9
1GL O5 O N N 10
1GL C6 C N N 11
1GL HO1 H N N 12
1GL H1 H N N 13
1GL H2 H N N 14
1GL H22 H N N 15
1GL H3 H N N 16
1GL HO3 H N N 17
1GL H4 H N N 18
1GL HM41 H N N 19
1GL HM42 H N N 20
1GL HM43 H N N 21
1GL H5 H N N 22
1GL H61 H N N 23
1GL H62 H N N 24
1GL H63 H N N 25
ARI O1 O N N 26
ARI C1 C N R 27
ARI C2 C N N 28
ARI C3 C N N 29
ARI C4 C N R 30
ARI O4 O N N 31
ARI CME C N N 32
ARI CO4 C N N 33
ARI OC4 O N N 34
ARI C5 C N R 35
ARI O5 O N N 36
ARI C6 C N N 37
ARI HO1 H N N 38
ARI H1 H N N 39
ARI H2 H N N 40
ARI H22 H N N 41
ARI H3 H N N 42
ARI H32 H N N 43
ARI H4 H N N 44
ARI H41 H N N 45
ARI H42 H N N 46
ARI H43 H N N 47
ARI H5 H N N 48
ARI H61 H N N 49
ARI H62 H N N 50
ARI H63 H N N 51
CDR O1 O N N 52
CDR C1 C N R 53
CDR C2 C N N 54
CDR C3 C N N 55
CDR C4 C N S 56
CDR O4 O N N 57
CDR C5 C N R 58
CDR O5 O N N 59
CDR C6 C N N 60
CDR HO1 H N N 61
CDR H1 H N N 62
CDR H2 H N N 63
CDR H22 H N N 64
CDR H3 H N N 65
CDR H32 H N N 66
CDR H4 H N N 67
CDR HO4 H N N 68
CDR H5 H N N 69
CDR H61 H N N 70
CDR H62 H N N 71
CDR H63 H N N 72
CPH C1 C N N 73
CPH O1 O N N 74
CPH C2 C N S 75
CPH C3 C N R 76
CPH C4 C N N 77
CPH C5 C Y N 78
CPH C6 C Y N 79
CPH C7 C Y N 80
CPH C8 C Y N 81
CPH O8 O N N 82
CPH C9 C Y N 83
CPH O9 O N N 84
CPH "C1'" C N S 85
CPH "O1'" O N N 86
CPH C10 C Y N 87
CPH "C2'" C N N 88
CPH "O2'" O N N 89
CPH "C3'" C N S 90
CPH "O3'" O N N 91
CPH "C4'" C N R 92
CPH "O4'" O N N 93
CPH C4A C Y N 94
CPH "C5'" C N N 95
CPH C5A C Y N 96
CPH C8A C Y N 97
CPH C9A C Y N 98
CPH CC7 C N N 99
CPH O6 O N N 100
CPH O2 O N N 101
CPH CME C N N 102
CPH H2 H N N 103
CPH H3 H N N 104
CPH H4 H N N 105
CPH H4A H N N 106
CPH H5 H N N 107
CPH HO8 H N N 108
CPH HO9 H N N 109
CPH "H1'" H N N 110
CPH H10 H N N 111
CPH "H3'" H N N 112
CPH "HO3'" H N N 113
CPH "H4'" H N N 114
CPH "HO4'" H N N 115
CPH "H5'" H N N 116
CPH "H5'A" H N N 117
CPH "H5'B" H N N 118
CPH HC7 H N N 119
CPH HC7A H N N 120
CPH HC7B H N N 121
CPH HO6 H N N 122
CPH HO2 H N N 123
CPH HME H N N 124
CPH HMEA H N N 125
CPH HMEB H N N 126
DA OP3 O N N 127
DA P P N N 128
DA OP1 O N N 129
DA OP2 O N N 130
DA "O5'" O N N 131
DA "C5'" C N N 132
DA "C4'" C N R 133
DA "O4'" O N N 134
DA "C3'" C N S 135
DA "O3'" O N N 136
DA "C2'" C N N 137
DA "C1'" C N R 138
DA N9 N Y N 139
DA C8 C Y N 140
DA N7 N Y N 141
DA C5 C Y N 142
DA C6 C Y N 143
DA N6 N N N 144
DA N1 N Y N 145
DA C2 C Y N 146
DA N3 N Y N 147
DA C4 C Y N 148
DA HOP3 H N N 149
DA HOP2 H N N 150
DA "H5'" H N N 151
DA "H5''" H N N 152
DA "H4'" H N N 153
DA "H3'" H N N 154
DA "HO3'" H N N 155
DA "H2'" H N N 156
DA "H2''" H N N 157
DA "H1'" H N N 158
DA H8 H N N 159
DA H61 H N N 160
DA H62 H N N 161
DA H2 H N N 162
DC OP3 O N N 163
DC P P N N 164
DC OP1 O N N 165
DC OP2 O N N 166
DC "O5'" O N N 167
DC "C5'" C N N 168
DC "C4'" C N R 169
DC "O4'" O N N 170
DC "C3'" C N S 171
DC "O3'" O N N 172
DC "C2'" C N N 173
DC "C1'" C N R 174
DC N1 N N N 175
DC C2 C N N 176
DC O2 O N N 177
DC N3 N N N 178
DC C4 C N N 179
DC N4 N N N 180
DC C5 C N N 181
DC C6 C N N 182
DC HOP3 H N N 183
DC HOP2 H N N 184
DC "H5'" H N N 185
DC "H5''" H N N 186
DC "H4'" H N N 187
DC "H3'" H N N 188
DC "HO3'" H N N 189
DC "H2'" H N N 190
DC "H2''" H N N 191
DC "H1'" H N N 192
DC H41 H N N 193
DC H42 H N N 194
DC H5 H N N 195
DC H6 H N N 196
DG OP3 O N N 197
DG P P N N 198
DG OP1 O N N 199
DG OP2 O N N 200
DG "O5'" O N N 201
DG "C5'" C N N 202
DG "C4'" C N R 203
DG "O4'" O N N 204
DG "C3'" C N S 205
DG "O3'" O N N 206
DG "C2'" C N N 207
DG "C1'" C N R 208
DG N9 N Y N 209
DG C8 C Y N 210
DG N7 N Y N 211
DG C5 C Y N 212
DG C6 C N N 213
DG O6 O N N 214
DG N1 N N N 215
DG C2 C N N 216
DG N2 N N N 217
DG N3 N N N 218
DG C4 C Y N 219
DG HOP3 H N N 220
DG HOP2 H N N 221
DG "H5'" H N N 222
DG "H5''" H N N 223
DG "H4'" H N N 224
DG "H3'" H N N 225
DG "HO3'" H N N 226
DG "H2'" H N N 227
DG "H2''" H N N 228
DG "H1'" H N N 229
DG H8 H N N 230
DG H1 H N N 231
DG H21 H N N 232
DG H22 H N N 233
DT OP3 O N N 234
DT P P N N 235
DT OP1 O N N 236
DT OP2 O N N 237
DT "O5'" O N N 238
DT "C5'" C N N 239
DT "C4'" C N R 240
DT "O4'" O N N 241
DT "C3'" C N S 242
DT "O3'" O N N 243
DT "C2'" C N N 244
DT "C1'" C N R 245
DT N1 N N N 246
DT C2 C N N 247
DT O2 O N N 248
DT N3 N N N 249
DT C4 C N N 250
DT O4 O N N 251
DT C5 C N N 252
DT C7 C N N 253
DT C6 C N N 254
DT HOP3 H N N 255
DT HOP2 H N N 256
DT "H5'" H N N 257
DT "H5''" H N N 258
DT "H4'" H N N 259
DT "H3'" H N N 260
DT "HO3'" H N N 261
DT "H2'" H N N 262
DT "H2''" H N N 263
DT "H1'" H N N 264
DT H3 H N N 265
DT H71 H N N 266
DT H72 H N N 267
DT H73 H N N 268
DT H6 H N N 269
ERI O1 O N N 270
ERI C1 C N R 271
ERI C2 C N N 272
ERI C3 C N S 273
ERI O3 O N N 274
ERI CC3 C N N 275
ERI C4 C N S 276
ERI O4 O N N 277
ERI CME C N N 278
ERI CO4 C N N 279
ERI OC4 O N N 280
ERI C5 C N S 281
ERI O5 O N N 282
ERI C6 C N N 283
ERI HO1 H N N 284
ERI H1 H N N 285
ERI H21 H N N 286
ERI H22 H N N 287
ERI HO3 H N N 288
ERI H31 H N N 289
ERI H32 H N N 290
ERI H33 H N N 291
ERI H4 H N N 292
ERI H41 H N N 293
ERI H42 H N N 294
ERI H43 H N N 295
ERI H5 H N N 296
ERI H61 H N N 297
ERI H62 H N N 298
ERI H63 H N N 299
MG MG MG N N 300
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1GL O1 C1 sing N N 1
1GL O1 HO1 sing N N 2
1GL C1 C2 sing N N 3
1GL C1 O5 sing N N 4
1GL C1 H1 sing N N 5
1GL C2 C3 sing N N 6
1GL C2 H2 sing N N 7
1GL C2 H22 sing N N 8
1GL C3 O3 sing N N 9
1GL C3 C4 sing N N 10
1GL C3 H3 sing N N 11
1GL O3 HO3 sing N N 12
1GL C4 O4 sing N N 13
1GL C4 C5 sing N N 14
1GL C4 H4 sing N N 15
1GL O4 CME sing N N 16
1GL CME HM41 sing N N 17
1GL CME HM42 sing N N 18
1GL CME HM43 sing N N 19
1GL C5 O5 sing N N 20
1GL C5 C6 sing N N 21
1GL C5 H5 sing N N 22
1GL C6 H61 sing N N 23
1GL C6 H62 sing N N 24
1GL C6 H63 sing N N 25
ARI O1 C1 sing N N 26
ARI O1 HO1 sing N N 27
ARI C1 C2 sing N N 28
ARI C1 O5 sing N N 29
ARI C1 H1 sing N N 30
ARI C2 C3 sing N N 31
ARI C2 H2 sing N N 32
ARI C2 H22 sing N N 33
ARI C3 C4 sing N N 34
ARI C3 H3 sing N N 35
ARI C3 H32 sing N N 36
ARI C4 O4 sing N N 37
ARI C4 C5 sing N N 38
ARI C4 H4 sing N N 39
ARI O4 CO4 sing N N 40
ARI CME CO4 sing N N 41
ARI CME H41 sing N N 42
ARI CME H42 sing N N 43
ARI CME H43 sing N N 44
ARI CO4 OC4 doub N N 45
ARI C5 O5 sing N N 46
ARI C5 C6 sing N N 47
ARI C5 H5 sing N N 48
ARI C6 H61 sing N N 49
ARI C6 H62 sing N N 50
ARI C6 H63 sing N N 51
CDR O1 C1 sing N N 52
CDR O1 HO1 sing N N 53
CDR C1 C2 sing N N 54
CDR C1 O5 sing N N 55
CDR C1 H1 sing N N 56
CDR C2 C3 sing N N 57
CDR C2 H2 sing N N 58
CDR C2 H22 sing N N 59
CDR C3 C4 sing N N 60
CDR C3 H3 sing N N 61
CDR C3 H32 sing N N 62
CDR C4 O4 sing N N 63
CDR C4 C5 sing N N 64
CDR C4 H4 sing N N 65
CDR O4 HO4 sing N N 66
CDR C5 O5 sing N N 67
CDR C5 C6 sing N N 68
CDR C5 H5 sing N N 69
CDR C6 H61 sing N N 70
CDR C6 H62 sing N N 71
CDR C6 H63 sing N N 72
CPH O1 C1 doub N N 73
CPH C9A C1 sing N N 74
CPH C1 C2 sing N N 75
CPH C2 O2 sing N N 76
CPH C2 C3 sing N N 77
CPH C2 H2 sing N N 78
CPH C3 C4 sing N N 79
CPH C3 "C1'" sing N N 80
CPH C3 H3 sing N N 81
CPH C4A C4 sing N N 82
CPH C4 H4 sing N N 83
CPH C4 H4A sing N N 84
CPH C6 C5 doub Y N 85
CPH C5 C5A sing Y N 86
CPH C5 H5 sing N N 87
CPH C7 C6 sing Y N 88
CPH O6 C6 sing N N 89
CPH CC7 C7 sing N N 90
CPH C7 C8 doub Y N 91
CPH O8 C8 sing N N 92
CPH C8 C8A sing Y N 93
CPH O8 HO8 sing N N 94
CPH O9 C9 sing N N 95
CPH C8A C9 doub Y N 96
CPH C9 C9A sing Y N 97
CPH O9 HO9 sing N N 98
CPH "C2'" "C1'" sing N N 99
CPH "C1'" "O1'" sing N N 100
CPH "C1'" "H1'" sing N N 101
CPH "O1'" CME sing N N 102
CPH C5A C10 doub Y N 103
CPH C10 C4A sing Y N 104
CPH C10 H10 sing N N 105
CPH "O2'" "C2'" doub N N 106
CPH "C2'" "C3'" sing N N 107
CPH "O3'" "C3'" sing N N 108
CPH "C3'" "C4'" sing N N 109
CPH "C3'" "H3'" sing N N 110
CPH "O3'" "HO3'" sing N N 111
CPH "O4'" "C4'" sing N N 112
CPH "C4'" "C5'" sing N N 113
CPH "C4'" "H4'" sing N N 114
CPH "O4'" "HO4'" sing N N 115
CPH C9A C4A doub Y N 116
CPH "C5'" "H5'" sing N N 117
CPH "C5'" "H5'A" sing N N 118
CPH "C5'" "H5'B" sing N N 119
CPH C8A C5A sing Y N 120
CPH CC7 HC7 sing N N 121
CPH CC7 HC7A sing N N 122
CPH CC7 HC7B sing N N 123
CPH O6 HO6 sing N N 124
CPH O2 HO2 sing N N 125
CPH CME HME sing N N 126
CPH CME HMEA sing N N 127
CPH CME HMEB sing N N 128
DA OP3 P sing N N 129
DA OP3 HOP3 sing N N 130
DA P OP1 doub N N 131
DA P OP2 sing N N 132
DA P "O5'" sing N N 133
DA OP2 HOP2 sing N N 134
DA "O5'" "C5'" sing N N 135
DA "C5'" "C4'" sing N N 136
DA "C5'" "H5'" sing N N 137
DA "C5'" "H5''" sing N N 138
DA "C4'" "O4'" sing N N 139
DA "C4'" "C3'" sing N N 140
DA "C4'" "H4'" sing N N 141
DA "O4'" "C1'" sing N N 142
DA "C3'" "O3'" sing N N 143
DA "C3'" "C2'" sing N N 144
DA "C3'" "H3'" sing N N 145
DA "O3'" "HO3'" sing N N 146
DA "C2'" "C1'" sing N N 147
DA "C2'" "H2'" sing N N 148
DA "C2'" "H2''" sing N N 149
DA "C1'" N9 sing N N 150
DA "C1'" "H1'" sing N N 151
DA N9 C8 sing Y N 152
DA N9 C4 sing Y N 153
DA C8 N7 doub Y N 154
DA C8 H8 sing N N 155
DA N7 C5 sing Y N 156
DA C5 C6 sing Y N 157
DA C5 C4 doub Y N 158
DA C6 N6 sing N N 159
DA C6 N1 doub Y N 160
DA N6 H61 sing N N 161
DA N6 H62 sing N N 162
DA N1 C2 sing Y N 163
DA C2 N3 doub Y N 164
DA C2 H2 sing N N 165
DA N3 C4 sing Y N 166
DC OP3 P sing N N 167
DC OP3 HOP3 sing N N 168
DC P OP1 doub N N 169
DC P OP2 sing N N 170
DC P "O5'" sing N N 171
DC OP2 HOP2 sing N N 172
DC "O5'" "C5'" sing N N 173
DC "C5'" "C4'" sing N N 174
DC "C5'" "H5'" sing N N 175
DC "C5'" "H5''" sing N N 176
DC "C4'" "O4'" sing N N 177
DC "C4'" "C3'" sing N N 178
DC "C4'" "H4'" sing N N 179
DC "O4'" "C1'" sing N N 180
DC "C3'" "O3'" sing N N 181
DC "C3'" "C2'" sing N N 182
DC "C3'" "H3'" sing N N 183
DC "O3'" "HO3'" sing N N 184
DC "C2'" "C1'" sing N N 185
DC "C2'" "H2'" sing N N 186
DC "C2'" "H2''" sing N N 187
DC "C1'" N1 sing N N 188
DC "C1'" "H1'" sing N N 189
DC N1 C2 sing N N 190
DC N1 C6 sing N N 191
DC C2 O2 doub N N 192
DC C2 N3 sing N N 193
DC N3 C4 doub N N 194
DC C4 N4 sing N N 195
DC C4 C5 sing N N 196
DC N4 H41 sing N N 197
DC N4 H42 sing N N 198
DC C5 C6 doub N N 199
DC C5 H5 sing N N 200
DC C6 H6 sing N N 201
DG OP3 P sing N N 202
DG OP3 HOP3 sing N N 203
DG P OP1 doub N N 204
DG P OP2 sing N N 205
DG P "O5'" sing N N 206
DG OP2 HOP2 sing N N 207
DG "O5'" "C5'" sing N N 208
DG "C5'" "C4'" sing N N 209
DG "C5'" "H5'" sing N N 210
DG "C5'" "H5''" sing N N 211
DG "C4'" "O4'" sing N N 212
DG "C4'" "C3'" sing N N 213
DG "C4'" "H4'" sing N N 214
DG "O4'" "C1'" sing N N 215
DG "C3'" "O3'" sing N N 216
DG "C3'" "C2'" sing N N 217
DG "C3'" "H3'" sing N N 218
DG "O3'" "HO3'" sing N N 219
DG "C2'" "C1'" sing N N 220
DG "C2'" "H2'" sing N N 221
DG "C2'" "H2''" sing N N 222
DG "C1'" N9 sing N N 223
DG "C1'" "H1'" sing N N 224
DG N9 C8 sing Y N 225
DG N9 C4 sing Y N 226
DG C8 N7 doub Y N 227
DG C8 H8 sing N N 228
DG N7 C5 sing Y N 229
DG C5 C6 sing N N 230
DG C5 C4 doub Y N 231
DG C6 O6 doub N N 232
DG C6 N1 sing N N 233
DG N1 C2 sing N N 234
DG N1 H1 sing N N 235
DG C2 N2 sing N N 236
DG C2 N3 doub N N 237
DG N2 H21 sing N N 238
DG N2 H22 sing N N 239
DG N3 C4 sing N N 240
DT OP3 P sing N N 241
DT OP3 HOP3 sing N N 242
DT P OP1 doub N N 243
DT P OP2 sing N N 244
DT P "O5'" sing N N 245
DT OP2 HOP2 sing N N 246
DT "O5'" "C5'" sing N N 247
DT "C5'" "C4'" sing N N 248
DT "C5'" "H5'" sing N N 249
DT "C5'" "H5''" sing N N 250
DT "C4'" "O4'" sing N N 251
DT "C4'" "C3'" sing N N 252
DT "C4'" "H4'" sing N N 253
DT "O4'" "C1'" sing N N 254
DT "C3'" "O3'" sing N N 255
DT "C3'" "C2'" sing N N 256
DT "C3'" "H3'" sing N N 257
DT "O3'" "HO3'" sing N N 258
DT "C2'" "C1'" sing N N 259
DT "C2'" "H2'" sing N N 260
DT "C2'" "H2''" sing N N 261
DT "C1'" N1 sing N N 262
DT "C1'" "H1'" sing N N 263
DT N1 C2 sing N N 264
DT N1 C6 sing N N 265
DT C2 O2 doub N N 266
DT C2 N3 sing N N 267
DT N3 C4 sing N N 268
DT N3 H3 sing N N 269
DT C4 O4 doub N N 270
DT C4 C5 sing N N 271
DT C5 C7 sing N N 272
DT C5 C6 doub N N 273
DT C7 H71 sing N N 274
DT C7 H72 sing N N 275
DT C7 H73 sing N N 276
DT C6 H6 sing N N 277
ERI O1 C1 sing N N 278
ERI O1 HO1 sing N N 279
ERI C1 C2 sing N N 280
ERI C1 O5 sing N N 281
ERI C1 H1 sing N N 282
ERI C2 C3 sing N N 283
ERI C2 H21 sing N N 284
ERI C2 H22 sing N N 285
ERI C3 O3 sing N N 286
ERI C3 CC3 sing N N 287
ERI C3 C4 sing N N 288
ERI O3 HO3 sing N N 289
ERI CC3 H31 sing N N 290
ERI CC3 H32 sing N N 291
ERI CC3 H33 sing N N 292
ERI C4 O4 sing N N 293
ERI C4 C5 sing N N 294
ERI C4 H4 sing N N 295
ERI O4 CO4 sing N N 296
ERI CME CO4 sing N N 297
ERI CME H41 sing N N 298
ERI CME H42 sing N N 299
ERI CME H43 sing N N 300
ERI CO4 OC4 doub N N 301
ERI C5 O5 sing N N 302
ERI C5 C6 sing N N 303
ERI C5 H5 sing N N 304
ERI C6 H61 sing N N 305
ERI C6 H62 sing N N 306
ERI C6 H63 sing N N 307
#
_ndb_struct_conf_na.entry_id 1D83
_ndb_struct_conf_na.feature 'double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 A DA 1 1_555 B DT 8 1_555 0.356 -0.212 -1.256 -18.128 11.369 -6.534 1 A_DA1:DT18_B A 1 ? B 18 ? 20 1
1 A DA 2 1_555 B DT 7 1_555 0.338 0.064 -0.083 7.583 22.375 2.349 2 A_DA2:DT17_B A 2 ? B 17 ? 20 1
1 A DG 3 1_555 B DC 6 1_555 -0.644 -0.499 0.000 31.514 12.267 -9.401 3 A_DG3:DC16_B A 3 ? B 16 ? 19 1
1 A DG 4 1_555 B DC 5 1_555 -0.091 -1.238 1.967 9.564 -5.484 -5.922 4 A_DG4:DC15_B A 4 ? B 15 ? 19 1
1 A DC 5 1_555 B DG 4 1_555 0.095 -1.223 1.974 -9.968 -5.292 -5.902 5 A_DC5:DG14_B A 5 ? B 14 ? 19 1
1 A DC 6 1_555 B DG 3 1_555 0.685 -0.470 0.022 -31.815 12.629 -9.377 6 A_DC6:DG13_B A 6 ? B 13 ? 19 1
1 A DT 7 1_555 B DA 2 1_555 -0.260 0.089 -0.053 -7.924 22.780 2.336 7 A_DT7:DA12_B A 7 ? B 12 ? 20 1
1 A DT 8 1_555 B DA 1 1_555 -0.250 -0.226 -1.256 18.221 11.835 -6.662 8 A_DT8:DA11_B A 8 ? B 11 ? 20 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 A DA 1 1_555 B DT 8 1_555 A DA 2 1_555 B DT 7 1_555 0.280 -0.854 3.352 -8.238 -14.021 27.907 1.159 -2.090 3.207 -26.424 15.525
32.218 1 AA_DA1DA2:DT17DT18_BB A 1 ? B 18 ? A 2 ? B 17 ?
1 A DA 2 1_555 B DT 7 1_555 A DG 3 1_555 B DC 6 1_555 -0.714 -1.240 2.744 -2.586 5.534 22.535 -4.591 1.051 2.439 13.837 6.466
23.337 2 AA_DA2DG3:DC16DT17_BB A 2 ? B 17 ? A 3 ? B 16 ?
1 A DG 3 1_555 B DC 6 1_555 A DG 4 1_555 B DC 5 1_555 0.892 -1.748 4.966 -7.446 -9.647 34.697 -0.711 -3.009 4.972 -15.592 12.036
36.712 3 AA_DG3DG4:DC15DC16_BB A 3 ? B 16 ? A 4 ? B 15 ?
1 A DG 4 1_555 B DC 5 1_555 A DC 5 1_555 B DG 4 1_555 0.001 -2.737 3.913 0.030 6.510 33.859 -5.753 0.004 3.344 11.052 -0.051
34.462 4 AA_DG4DC5:DG14DC15_BB A 4 ? B 15 ? A 5 ? B 14 ?
1 A DC 5 1_555 B DG 4 1_555 A DC 6 1_555 B DG 3 1_555 -0.892 -1.753 4.966 7.404 -9.606 34.701 -0.727 3.002 4.975 -15.530
-11.969 36.698 5 AA_DC5DC6:DG13DG14_BB A 5 ? B 14 ? A 6 ? B 13 ?
1 A DC 6 1_555 B DG 3 1_555 A DT 7 1_555 B DA 2 1_555 0.713 -1.238 2.749 2.551 5.544 22.565 -4.584 -1.059 2.443 13.845 -6.372
23.365 6 AA_DC6DT7:DA12DG13_BB A 6 ? B 13 ? A 7 ? B 12 ?
1 A DT 7 1_555 B DA 2 1_555 A DT 8 1_555 B DA 1 1_555 -0.287 -0.860 3.346 8.313 -14.086 27.868 1.154 2.113 3.199 -26.550
-15.669 32.231 7 AA_DT7DT8:DA11DA12_BB A 7 ? B 12 ? A 8 ? B 11 ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 CDR 1 n
2 CDR 2 n
2 ERI 3 n
3 ARI 1 n
3 1GL 2 n
#
_atom_sites.entry_id 1D83
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
MG
N
O
P
#
loop_