data_1DDP
# 
_entry.id   1DDP 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1DDP         pdb_00001ddp 10.2210/pdb1ddp/pdb 
WWPDB D_1000172746 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1996-03-08 
2 'Structure model' 1 1 2008-03-24 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-03-13 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Non-polymer description'   
3 3 'Structure model' 'Version format compliance' 
4 4 'Structure model' 'Data collection'           
5 4 'Structure model' 'Database references'       
6 4 'Structure model' 'Derived calculations'      
7 4 'Structure model' Other                       
8 4 'Structure model' 'Source and taxonomy'       
9 4 'Structure model' 'Structure summary'         
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom       
2 4 'Structure model' chem_comp_bond       
3 4 'Structure model' database_2           
4 4 'Structure model' entity               
5 4 'Structure model' pdbx_database_status 
6 4 'Structure model' pdbx_entity_src_syn  
7 4 'Structure model' pdbx_nmr_software    
8 4 'Structure model' struct_site          
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
3 4 'Structure model' '_entity.details'                     
4 4 'Structure model' '_pdbx_database_status.process_site'  
5 4 'Structure model' '_pdbx_nmr_software.name'             
6 4 'Structure model' '_struct_site.pdbx_auth_asym_id'      
7 4 'Structure model' '_struct_site.pdbx_auth_comp_id'      
8 4 'Structure model' '_struct_site.pdbx_auth_seq_id'       
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1DDP 
_pdbx_database_status.recvd_initial_deposition_date   1995-10-26 
_pdbx_database_status.deposit_site                    ? 
_pdbx_database_status.process_site                    BNL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Zhu, L.'       1 
'Huang, H.'     2 
'Reid, B.R.'    3 
'Drobny, G.P.'  4 
'Hopkins, P.B.' 5 
# 
_citation.id                        primary 
_citation.title                     'Solution structure of a cisplatin-induced DNA interstrand cross-link.' 
_citation.journal_abbrev            Science 
_citation.journal_volume            270 
_citation.page_first                1842 
_citation.page_last                 1845 
_citation.year                      1995 
_citation.journal_id_ASTM           SCIEAS 
_citation.country                   US 
_citation.journal_id_ISSN           0036-8075 
_citation.journal_id_CSD            0038 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   8525382 
_citation.pdbx_database_id_DOI      ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Huang, H.'     1 ? 
primary 'Zhu, L.'       2 ? 
primary 'Reid, B.R.'    3 ? 
primary 'Drobny, G.P.'  4 ? 
primary 'Hopkins, P.B.' 5 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*CP*AP*TP*AP*GP*CP*TP*AP*TP*G)-3')
;
3044.016 2 ? ? ? ?                        
2 non-polymer syn Cisplatin                                      300.045  1 ? ? ? 'CHEMICALLY SYNTHESIZED' 
# 
_entity_keywords.entity_id   1 
_entity_keywords.text        'DEOXYRIBONUCLEIC ACID' 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DA)(DT)(DA)(DG)(DC)(DT)(DA)(DT)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CATAGCTATG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        Cisplatin 
_pdbx_entity_nonpoly.comp_id     CPT 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC n 
1 2  DA n 
1 3  DT n 
1 4  DA n 
1 5  DG n 
1 6  DC n 
1 7  DT n 
1 8  DA n 
1 9  DT n 
1 10 DG n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'CHEMICALLY SYNTHESIZED' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
CPT non-polymer   . Cisplatin                            'diammine(dichloro)platinum' 'Cl2 H6 N2 Pt'    300.045 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?                            'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ?                            'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?                            'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ?                            'C10 H15 N2 O8 P' 322.208 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC 1  1  1  DC C A . n 
A 1 2  DA 2  2  2  DA A A . n 
A 1 3  DT 3  3  3  DT T A . n 
A 1 4  DA 4  4  4  DA A A . n 
A 1 5  DG 5  5  5  DG G A . n 
A 1 6  DC 6  6  6  DC C A . n 
A 1 7  DT 7  7  7  DT T A . n 
A 1 8  DA 8  8  8  DA A A . n 
A 1 9  DT 9  9  9  DT T A . n 
A 1 10 DG 10 10 10 DG G A . n 
B 1 1  DC 1  1  1  DC C B . n 
B 1 2  DA 2  2  2  DA A B . n 
B 1 3  DT 3  3  3  DT T B . n 
B 1 4  DA 4  4  4  DA A B . n 
B 1 5  DG 5  5  5  DG G B . n 
B 1 6  DC 6  6  6  DC C B . n 
B 1 7  DT 7  7  7  DT T B . n 
B 1 8  DA 8  8  8  DA A B . n 
B 1 9  DT 9  9  9  DT T B . n 
B 1 10 DG 10 10 10 DG G B . n 
# 
_pdbx_nonpoly_scheme.asym_id         C 
_pdbx_nonpoly_scheme.entity_id       2 
_pdbx_nonpoly_scheme.mon_id          CPT 
_pdbx_nonpoly_scheme.ndb_seq_num     1 
_pdbx_nonpoly_scheme.pdb_seq_num     11 
_pdbx_nonpoly_scheme.auth_seq_num    1 
_pdbx_nonpoly_scheme.pdb_mon_id      CPT 
_pdbx_nonpoly_scheme.auth_mon_id     CPT 
_pdbx_nonpoly_scheme.pdb_strand_id   A 
_pdbx_nonpoly_scheme.pdb_ins_code    . 
# 
_software.name             AMBER 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           1DDP 
_cell.length_a           1.000 
_cell.length_b           1.000 
_cell.length_c           1.000 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              1 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1DDP 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
# 
_exptl.entry_id          1DDP 
_exptl.method            'SOLUTION NMR' 
_exptl.crystals_number   ? 
# 
_database_PDB_matrix.entry_id          1DDP 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  1DDP 
_struct.title                     'Solution structure of a CISPLATIN-INDUCED [CATAGCTATG]2 Interstrand cross-link' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1DDP 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'DNA, DOUBLE HELIX, ANTITUMOR DRUG, CIS-DDP, INTERSTRAND CROSS-LINK' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1DDP 
_struct_ref.pdbx_db_accession          1DDP 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1DDP A 1 ? 10 ? 1DDP 1 ? 10 ? 1 10 
2 1 1DDP B 1 ? 10 ? 1DDP 1 ? 10 ? 1 10 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG  5  N7  ? ? ? 1_555 C CPT .  PT1 ? ? A DG  5  A CPT 11 1_555 ? ? ? ? ? ? ?               2.013 ? ? 
metalc2  metalc ? ? C CPT .  PT1 ? ? ? 1_555 B DG  5  N7  ? ? A CPT 11 B DG  5  1_555 ? ? ? ? ? ? ?               2.014 ? ? 
hydrog1  hydrog ? ? A DC  1  N4  ? ? ? 1_555 B DT  9  O4  ? ? A DC  1  B DT  9  1_555 ? ? ? ? ? ? 'DC-DT MISPAIR' ?     ? ? 
hydrog2  hydrog ? ? A DC  1  N3  ? ? ? 1_555 B DG  10 N1  ? ? A DC  1  B DG  10 1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog3  hydrog ? ? A DC  1  N4  ? ? ? 1_555 B DG  10 O6  ? ? A DC  1  B DG  10 1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog4  hydrog ? ? A DC  1  O2  ? ? ? 1_555 B DG  10 N2  ? ? A DC  1  B DG  10 1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog5  hydrog ? ? A DA  2  N1  ? ? ? 1_555 B DT  9  N3  ? ? A DA  2  B DT  9  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog6  hydrog ? ? A DA  2  N6  ? ? ? 1_555 B DT  9  O4  ? ? A DA  2  B DT  9  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog7  hydrog ? ? A DT  3  N3  ? ? ? 1_555 B DA  8  N1  ? ? A DT  3  B DA  8  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog8  hydrog ? ? A DT  3  O4  ? ? ? 1_555 B DA  8  N6  ? ? A DT  3  B DA  8  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog9  hydrog ? ? A DA  4  N1  ? ? ? 1_555 B DT  7  N3  ? ? A DA  4  B DT  7  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog10 hydrog ? ? A DA  4  N6  ? ? ? 1_555 B DT  7  O4  ? ? A DA  4  B DT  7  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog11 hydrog ? ? A DT  7  N3  ? ? ? 1_555 B DA  4  N1  ? ? A DT  7  B DA  4  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog12 hydrog ? ? A DT  7  O4  ? ? ? 1_555 B DA  4  N6  ? ? A DT  7  B DA  4  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog13 hydrog ? ? A DA  8  N1  ? ? ? 1_555 B DT  3  N3  ? ? A DA  8  B DT  3  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog14 hydrog ? ? A DA  8  N6  ? ? ? 1_555 B DT  3  O4  ? ? A DA  8  B DT  3  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog15 hydrog ? ? A DT  9  O4  ? ? ? 1_555 B DC  1  N4  ? ? A DT  9  B DC  1  1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ?     ? ? 
hydrog16 hydrog ? ? A DT  9  N3  ? ? ? 1_555 B DA  2  N1  ? ? A DT  9  B DA  2  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog17 hydrog ? ? A DT  9  O4  ? ? ? 1_555 B DA  2  N6  ? ? A DT  9  B DA  2  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog18 hydrog ? ? A DG  10 N1  ? ? ? 1_555 B DC  1  N3  ? ? A DG  10 B DC  1  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog19 hydrog ? ? A DG  10 N2  ? ? ? 1_555 B DC  1  O2  ? ? A DG  10 B DC  1  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
hydrog20 hydrog ? ? A DG  10 O6  ? ? ? 1_555 B DC  1  N4  ? ? A DG  10 B DC  1  1_555 ? ? ? ? ? ? WATSON-CRICK    ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1 N7 ? A DG  5 ? A DG  5  ? 1_555 PT1 ? C CPT . ? A CPT 11 ? 1_555 N1 ? C CPT . ? A CPT 11 ? 1_555 89.0  ? 
2 N7 ? A DG  5 ? A DG  5  ? 1_555 PT1 ? C CPT . ? A CPT 11 ? 1_555 N2 ? C CPT . ? A CPT 11 ? 1_555 178.8 ? 
3 N1 ? C CPT . ? A CPT 11 ? 1_555 PT1 ? C CPT . ? A CPT 11 ? 1_555 N2 ? C CPT . ? A CPT 11 ? 1_555 89.9  ? 
4 N7 ? A DG  5 ? A DG  5  ? 1_555 PT1 ? C CPT . ? A CPT 11 ? 1_555 N7 ? B DG  5 ? B DG  5  ? 1_555 92.2  ? 
5 N1 ? C CPT . ? A CPT 11 ? 1_555 PT1 ? C CPT . ? A CPT 11 ? 1_555 N7 ? B DG  5 ? B DG  5  ? 1_555 178.8 ? 
6 N2 ? C CPT . ? A CPT 11 ? 1_555 PT1 ? C CPT . ? A CPT 11 ? 1_555 N7 ? B DG  5 ? B DG  5  ? 1_555 89.0  ? 
# 
_struct_site.id                   AC1 
_struct_site.pdbx_evidence_code   Software 
_struct_site.pdbx_auth_asym_id    A 
_struct_site.pdbx_auth_comp_id    CPT 
_struct_site.pdbx_auth_seq_id     11 
_struct_site.pdbx_auth_ins_code   ? 
_struct_site.pdbx_num_residues    2 
_struct_site.details              'BINDING SITE FOR RESIDUE CPT A 11' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1 AC1 2 DG A 5 ? DG A 5 . ? 1_555 ? 
2 AC1 2 DG B 5 ? DG B 5 . ? 1_555 ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1   1  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.81 108.30 2.51 0.30 N 
2   1  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.19 108.30 5.89 0.30 N 
3   1  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.29 108.30 2.99 0.30 N 
4   1  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.59 108.30 3.29 0.30 N 
5   1  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.43 108.30 2.13 0.30 N 
6   1  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.34 108.30 2.04 0.30 N 
7   1  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.90 108.30 3.60 0.30 N 
8   1  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.03 108.30 2.73 0.30 N 
9   1  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.76 108.30 2.46 0.30 N 
10  1  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.21 108.30 5.91 0.30 N 
11  1  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.28 108.30 2.98 0.30 N 
12  1  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.61 108.30 3.31 0.30 N 
13  1  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.51 108.30 2.21 0.30 N 
14  1  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.33 108.30 2.03 0.30 N 
15  1  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.87 108.30 3.57 0.30 N 
16  2  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.77 108.30 2.47 0.30 N 
17  2  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.22 108.30 5.92 0.30 N 
18  2  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.29 108.30 2.99 0.30 N 
19  2  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 112.17 108.30 3.87 0.30 N 
20  2  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.33 108.30 2.03 0.30 N 
21  2  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.25 108.30 1.95 0.30 N 
22  2  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.78 108.30 3.48 0.30 N 
23  2  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.78 108.30 2.48 0.30 N 
24  2  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.25 108.30 5.95 0.30 N 
25  2  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.41 108.30 3.11 0.30 N 
26  2  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.63 108.30 3.33 0.30 N 
27  2  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.46 108.30 2.16 0.30 N 
28  2  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.25 108.30 1.95 0.30 N 
29  2  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.84 108.30 3.54 0.30 N 
30  3  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.80 108.30 2.50 0.30 N 
31  3  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.17 108.30 5.87 0.30 N 
32  3  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.28 108.30 2.98 0.30 N 
33  3  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 112.13 108.30 3.83 0.30 N 
34  3  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.32 108.30 2.02 0.30 N 
35  3  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.41 108.30 2.11 0.30 N 
36  3  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.87 108.30 3.57 0.30 N 
37  3  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.04 108.30 2.74 0.30 N 
38  3  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.84 108.30 2.54 0.30 N 
39  3  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.25 108.30 5.95 0.30 N 
40  3  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.35 108.30 3.05 0.30 N 
41  3  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.63 108.30 3.33 0.30 N 
42  3  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.41 108.30 2.11 0.30 N 
43  3  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.19 108.30 1.89 0.30 N 
44  3  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.58 108.30 3.28 0.30 N 
45  4  "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.98 108.30 2.68 0.30 N 
46  4  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.79 108.30 2.49 0.30 N 
47  4  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.38 108.30 6.08 0.30 N 
48  4  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.26 108.30 2.96 0.30 N 
49  4  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.69 108.30 3.39 0.30 N 
50  4  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.32 108.30 2.02 0.30 N 
51  4  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.19 108.30 1.89 0.30 N 
52  4  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.62 108.30 3.32 0.30 N 
53  4  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.01 108.30 2.71 0.30 N 
54  4  "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 110.24 108.30 1.94 0.30 N 
55  4  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 113.86 108.30 5.56 0.30 N 
56  4  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 113.87 108.30 5.57 0.30 N 
57  4  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.12 108.30 2.82 0.30 N 
58  4  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 112.29 108.30 3.99 0.30 N 
59  4  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.40 108.30 2.10 0.30 N 
60  4  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.39 108.30 2.09 0.30 N 
61  4  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.88 108.30 3.58 0.30 N 
62  5  "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.93 108.30 2.63 0.30 N 
63  5  "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 110.29 108.30 1.99 0.30 N 
64  5  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 113.99 108.30 5.69 0.30 N 
65  5  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 113.84 108.30 5.54 0.30 N 
66  5  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.14 108.30 2.84 0.30 N 
67  5  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.67 108.30 3.37 0.30 N 
68  5  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.51 108.30 2.21 0.30 N 
69  5  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.36 108.30 2.06 0.30 N 
70  5  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 112.01 108.30 3.71 0.30 N 
71  5  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.01 108.30 2.71 0.30 N 
72  5  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.81 108.30 2.51 0.30 N 
73  5  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.33 108.30 6.03 0.30 N 
74  5  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.27 108.30 2.97 0.30 N 
75  5  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.63 108.30 3.33 0.30 N 
76  5  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.36 108.30 2.06 0.30 N 
77  5  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.27 108.30 1.97 0.30 N 
78  5  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.53 108.30 3.23 0.30 N 
79  6  "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.98 108.30 2.68 0.30 N 
80  6  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.78 108.30 2.48 0.30 N 
81  6  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.36 108.30 6.06 0.30 N 
82  6  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.18 108.30 2.88 0.30 N 
83  6  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.63 108.30 3.33 0.30 N 
84  6  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.48 108.30 2.18 0.30 N 
85  6  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.13 108.30 1.83 0.30 N 
86  6  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.93 108.30 3.63 0.30 N 
87  6  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 110.96 108.30 2.66 0.30 N 
88  6  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 111.63 108.30 3.33 0.30 N 
89  6  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 113.90 108.30 5.60 0.30 N 
90  6  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.18 108.30 2.88 0.30 N 
91  6  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.73 108.30 3.43 0.30 N 
92  6  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.54 108.30 2.24 0.30 N 
93  6  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.27 108.30 1.97 0.30 N 
94  6  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.89 108.30 3.59 0.30 N 
95  7  "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.05 108.30 2.75 0.30 N 
96  7  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.79 108.30 2.49 0.30 N 
97  7  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.22 108.30 5.92 0.30 N 
98  7  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.39 108.30 3.09 0.30 N 
99  7  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.65 108.30 3.35 0.30 N 
100 7  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.43 108.30 2.13 0.30 N 
101 7  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.36 108.30 2.06 0.30 N 
102 7  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 112.01 108.30 3.71 0.30 N 
103 7  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.16 108.30 2.86 0.30 N 
104 7  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.96 108.30 2.66 0.30 N 
105 7  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.29 108.30 5.99 0.30 N 
106 7  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.33 108.30 3.03 0.30 N 
107 7  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.91 108.30 3.61 0.30 N 
108 7  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.27 108.30 1.97 0.30 N 
109 7  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.38 108.30 2.08 0.30 N 
110 7  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.84 108.30 3.54 0.30 N 
111 8  "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.98 108.30 2.68 0.30 N 
112 8  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.87 108.30 2.57 0.30 N 
113 8  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.33 108.30 6.03 0.30 N 
114 8  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.38 108.30 3.08 0.30 N 
115 8  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.65 108.30 3.35 0.30 N 
116 8  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.47 108.30 2.17 0.30 N 
117 8  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.29 108.30 1.99 0.30 N 
118 8  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.89 108.30 3.59 0.30 N 
119 8  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 112.81 108.30 4.51 0.30 N 
120 8  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.76 108.30 2.46 0.30 N 
121 8  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.22 108.30 5.92 0.30 N 
122 8  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.29 108.30 2.99 0.30 N 
123 8  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 112.18 108.30 3.88 0.30 N 
124 8  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.32 108.30 2.02 0.30 N 
125 8  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.37 108.30 2.07 0.30 N 
126 8  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.87 108.30 3.57 0.30 N 
127 9  "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.65 108.30 4.35 0.30 N 
128 9  "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.78 108.30 2.48 0.30 N 
129 9  "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.27 108.30 5.97 0.30 N 
130 9  "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.40 108.30 3.10 0.30 N 
131 9  "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.63 108.30 3.33 0.30 N 
132 9  "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.49 108.30 2.19 0.30 N 
133 9  "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.21 108.30 1.91 0.30 N 
134 9  "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.81 108.30 3.51 0.30 N 
135 9  "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 111.02 108.30 2.72 0.30 N 
136 9  "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.78 108.30 2.48 0.30 N 
137 9  "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.20 108.30 5.90 0.30 N 
138 9  "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.26 108.30 2.96 0.30 N 
139 9  "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 112.18 108.30 3.88 0.30 N 
140 9  "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.28 108.30 1.98 0.30 N 
141 9  "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.34 108.30 2.04 0.30 N 
142 9  "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.92 108.30 3.62 0.30 N 
143 10 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.63 108.30 4.33 0.30 N 
144 10 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.81 108.30 2.51 0.30 N 
145 10 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9 A DA 4 ? ? 114.23 108.30 5.93 0.30 N 
146 10 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.31 108.30 3.01 0.30 N 
147 10 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 112.23 108.30 3.93 0.30 N 
148 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.34 108.30 2.04 0.30 N 
149 10 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.38 108.30 2.08 0.30 N 
150 10 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.85 108.30 3.55 0.30 N 
151 10 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 110.98 108.30 2.68 0.30 N 
152 10 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 110.78 108.30 2.48 0.30 N 
153 10 "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 114.30 108.30 6.00 0.30 N 
154 10 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.33 108.30 3.03 0.30 N 
155 10 "O4'" B DC 6 ? ? "C1'" B DC 6 ? ? N1 B DC 6 ? ? 111.60 108.30 3.30 0.30 N 
156 10 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.41 108.30 2.11 0.30 N 
157 10 "O4'" B DA 8 ? ? "C1'" B DA 8 ? ? N9 B DA 8 ? ? 110.14 108.30 1.84 0.30 N 
158 10 "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 111.73 108.30 3.43 0.30 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1  1  DA A 2  ? ? 0.054 'SIDE CHAIN' 
2  1  DT A 3  ? ? 0.063 'SIDE CHAIN' 
3  1  DG A 5  ? ? 0.074 'SIDE CHAIN' 
4  1  DA A 8  ? ? 0.054 'SIDE CHAIN' 
5  1  DA B 2  ? ? 0.052 'SIDE CHAIN' 
6  1  DT B 3  ? ? 0.063 'SIDE CHAIN' 
7  1  DG B 5  ? ? 0.074 'SIDE CHAIN' 
8  1  DA B 8  ? ? 0.055 'SIDE CHAIN' 
9  2  DA A 2  ? ? 0.057 'SIDE CHAIN' 
10 2  DT A 3  ? ? 0.065 'SIDE CHAIN' 
11 2  DG A 5  ? ? 0.073 'SIDE CHAIN' 
12 2  DA A 8  ? ? 0.058 'SIDE CHAIN' 
13 2  DA B 2  ? ? 0.054 'SIDE CHAIN' 
14 2  DT B 3  ? ? 0.066 'SIDE CHAIN' 
15 2  DG B 5  ? ? 0.074 'SIDE CHAIN' 
16 2  DA B 8  ? ? 0.056 'SIDE CHAIN' 
17 3  DA A 2  ? ? 0.052 'SIDE CHAIN' 
18 3  DT A 3  ? ? 0.062 'SIDE CHAIN' 
19 3  DG A 5  ? ? 0.073 'SIDE CHAIN' 
20 3  DA A 8  ? ? 0.054 'SIDE CHAIN' 
21 3  DA B 2  ? ? 0.054 'SIDE CHAIN' 
22 3  DT B 3  ? ? 0.063 'SIDE CHAIN' 
23 3  DG B 5  ? ? 0.074 'SIDE CHAIN' 
24 3  DA B 8  ? ? 0.057 'SIDE CHAIN' 
25 4  DT A 3  ? ? 0.064 'SIDE CHAIN' 
26 4  DG A 5  ? ? 0.071 'SIDE CHAIN' 
27 4  DA A 8  ? ? 0.053 'SIDE CHAIN' 
28 4  DA B 2  ? ? 0.056 'SIDE CHAIN' 
29 4  DG B 5  ? ? 0.073 'SIDE CHAIN' 
30 4  DA B 8  ? ? 0.056 'SIDE CHAIN' 
31 5  DG A 5  ? ? 0.073 'SIDE CHAIN' 
32 5  DG A 10 ? ? 0.060 'SIDE CHAIN' 
33 5  DA B 2  ? ? 0.055 'SIDE CHAIN' 
34 5  DT B 3  ? ? 0.064 'SIDE CHAIN' 
35 5  DG B 5  ? ? 0.071 'SIDE CHAIN' 
36 6  DT A 3  ? ? 0.064 'SIDE CHAIN' 
37 6  DG A 5  ? ? 0.072 'SIDE CHAIN' 
38 6  DA A 8  ? ? 0.060 'SIDE CHAIN' 
39 6  DG A 10 ? ? 0.062 'SIDE CHAIN' 
40 6  DA B 2  ? ? 0.090 'SIDE CHAIN' 
41 6  DG B 5  ? ? 0.073 'SIDE CHAIN' 
42 6  DA B 8  ? ? 0.056 'SIDE CHAIN' 
43 7  DA A 2  ? ? 0.055 'SIDE CHAIN' 
44 7  DT A 3  ? ? 0.064 'SIDE CHAIN' 
45 7  DG A 5  ? ? 0.074 'SIDE CHAIN' 
46 7  DG A 10 ? ? 0.060 'SIDE CHAIN' 
47 7  DT B 3  ? ? 0.060 'SIDE CHAIN' 
48 7  DG B 5  ? ? 0.072 'SIDE CHAIN' 
49 7  DA B 8  ? ? 0.055 'SIDE CHAIN' 
50 8  DA A 2  ? ? 0.054 'SIDE CHAIN' 
51 8  DT A 3  ? ? 0.064 'SIDE CHAIN' 
52 8  DG A 5  ? ? 0.073 'SIDE CHAIN' 
53 8  DA A 8  ? ? 0.054 'SIDE CHAIN' 
54 8  DG A 10 ? ? 0.059 'SIDE CHAIN' 
55 8  DA B 2  ? ? 0.057 'SIDE CHAIN' 
56 8  DT B 3  ? ? 0.064 'SIDE CHAIN' 
57 8  DG B 5  ? ? 0.073 'SIDE CHAIN' 
58 8  DA B 8  ? ? 0.055 'SIDE CHAIN' 
59 9  DA A 2  ? ? 0.053 'SIDE CHAIN' 
60 9  DT A 3  ? ? 0.065 'SIDE CHAIN' 
61 9  DG A 5  ? ? 0.074 'SIDE CHAIN' 
62 9  DA A 8  ? ? 0.055 'SIDE CHAIN' 
63 9  DT B 3  ? ? 0.062 'SIDE CHAIN' 
64 9  DG B 5  ? ? 0.073 'SIDE CHAIN' 
65 9  DA B 8  ? ? 0.056 'SIDE CHAIN' 
66 10 DT A 3  ? ? 0.063 'SIDE CHAIN' 
67 10 DG A 5  ? ? 0.072 'SIDE CHAIN' 
68 10 DA A 8  ? ? 0.055 'SIDE CHAIN' 
69 10 DA B 2  ? ? 0.052 'SIDE CHAIN' 
70 10 DT B 3  ? ? 0.064 'SIDE CHAIN' 
71 10 DG B 5  ? ? 0.073 'SIDE CHAIN' 
72 10 DA B 8  ? ? 0.056 'SIDE CHAIN' 
# 
_pdbx_nmr_ensemble.entry_id                                      1DDP 
_pdbx_nmr_ensemble.conformers_calculated_total_number            ? 
_pdbx_nmr_ensemble.conformers_submitted_total_number             10 
_pdbx_nmr_ensemble.conformer_selection_criteria                  ? 
_pdbx_nmr_ensemble.average_constraints_per_residue               ? 
_pdbx_nmr_ensemble.average_constraint_violations_per_residue     ? 
_pdbx_nmr_ensemble.maximum_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.average_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.distance_constraint_violation_method          ? 
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method     ? 
# 
_pdbx_nmr_details.entry_id   1DDP 
_pdbx_nmr_details.text       
;BECAUSE THE BOND LENGTH BETWEEN PT AND N7 IN THE CISPLATIN CROSS-LINK IS LONGER THAN 2.00 ANGSTROMS, THE PT-N7 BONDS MIGHT NOT APPEAR WHEN A PROGRAM READS THIS ENTRY.
;
# 
_pdbx_nmr_refine.entry_id           1DDP 
_pdbx_nmr_refine.method             ? 
_pdbx_nmr_refine.details            
;FINAL RMS COORD. SHIFT 0.55 ANGSTROMS NUMBER OF ATOMS USED IN REFINEMENT. NUMBER OF PROTEIN ATOMS 0 NUMBER OF NUCLEIC ACID ATOMS 643 NUMBER OF HETEROGEN ATOMS 0 NUMBER OF SOLVENT ATOMS 0 AMBER FORCE FIELDS USED
;
_pdbx_nmr_refine.software_ordinal   1 
# 
_pdbx_nmr_software.name             Discover 
_pdbx_nmr_software.version          ? 
_pdbx_nmr_software.classification   refinement 
_pdbx_nmr_software.authors          'BIOSYM TECHNOLOGIES' 
_pdbx_nmr_software.ordinal          1 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
CPT PT1    PT N N 1   
CPT N1     N  N N 2   
CPT N2     N  N N 3   
CPT H11    H  N N 4   
CPT H12    H  N N 5   
CPT H21    H  N N 6   
CPT H22    H  N N 7   
CPT CL2    CL N N 8   
CPT CL1    CL N N 9   
CPT H13    H  N N 10  
CPT H23    H  N N 11  
DA  OP3    O  N N 12  
DA  P      P  N N 13  
DA  OP1    O  N N 14  
DA  OP2    O  N N 15  
DA  "O5'"  O  N N 16  
DA  "C5'"  C  N N 17  
DA  "C4'"  C  N R 18  
DA  "O4'"  O  N N 19  
DA  "C3'"  C  N S 20  
DA  "O3'"  O  N N 21  
DA  "C2'"  C  N N 22  
DA  "C1'"  C  N R 23  
DA  N9     N  Y N 24  
DA  C8     C  Y N 25  
DA  N7     N  Y N 26  
DA  C5     C  Y N 27  
DA  C6     C  Y N 28  
DA  N6     N  N N 29  
DA  N1     N  Y N 30  
DA  C2     C  Y N 31  
DA  N3     N  Y N 32  
DA  C4     C  Y N 33  
DA  HOP3   H  N N 34  
DA  HOP2   H  N N 35  
DA  "H5'"  H  N N 36  
DA  "H5''" H  N N 37  
DA  "H4'"  H  N N 38  
DA  "H3'"  H  N N 39  
DA  "HO3'" H  N N 40  
DA  "H2'"  H  N N 41  
DA  "H2''" H  N N 42  
DA  "H1'"  H  N N 43  
DA  H8     H  N N 44  
DA  H61    H  N N 45  
DA  H62    H  N N 46  
DA  H2     H  N N 47  
DC  OP3    O  N N 48  
DC  P      P  N N 49  
DC  OP1    O  N N 50  
DC  OP2    O  N N 51  
DC  "O5'"  O  N N 52  
DC  "C5'"  C  N N 53  
DC  "C4'"  C  N R 54  
DC  "O4'"  O  N N 55  
DC  "C3'"  C  N S 56  
DC  "O3'"  O  N N 57  
DC  "C2'"  C  N N 58  
DC  "C1'"  C  N R 59  
DC  N1     N  N N 60  
DC  C2     C  N N 61  
DC  O2     O  N N 62  
DC  N3     N  N N 63  
DC  C4     C  N N 64  
DC  N4     N  N N 65  
DC  C5     C  N N 66  
DC  C6     C  N N 67  
DC  HOP3   H  N N 68  
DC  HOP2   H  N N 69  
DC  "H5'"  H  N N 70  
DC  "H5''" H  N N 71  
DC  "H4'"  H  N N 72  
DC  "H3'"  H  N N 73  
DC  "HO3'" H  N N 74  
DC  "H2'"  H  N N 75  
DC  "H2''" H  N N 76  
DC  "H1'"  H  N N 77  
DC  H41    H  N N 78  
DC  H42    H  N N 79  
DC  H5     H  N N 80  
DC  H6     H  N N 81  
DG  OP3    O  N N 82  
DG  P      P  N N 83  
DG  OP1    O  N N 84  
DG  OP2    O  N N 85  
DG  "O5'"  O  N N 86  
DG  "C5'"  C  N N 87  
DG  "C4'"  C  N R 88  
DG  "O4'"  O  N N 89  
DG  "C3'"  C  N S 90  
DG  "O3'"  O  N N 91  
DG  "C2'"  C  N N 92  
DG  "C1'"  C  N R 93  
DG  N9     N  Y N 94  
DG  C8     C  Y N 95  
DG  N7     N  Y N 96  
DG  C5     C  Y N 97  
DG  C6     C  N N 98  
DG  O6     O  N N 99  
DG  N1     N  N N 100 
DG  C2     C  N N 101 
DG  N2     N  N N 102 
DG  N3     N  N N 103 
DG  C4     C  Y N 104 
DG  HOP3   H  N N 105 
DG  HOP2   H  N N 106 
DG  "H5'"  H  N N 107 
DG  "H5''" H  N N 108 
DG  "H4'"  H  N N 109 
DG  "H3'"  H  N N 110 
DG  "HO3'" H  N N 111 
DG  "H2'"  H  N N 112 
DG  "H2''" H  N N 113 
DG  "H1'"  H  N N 114 
DG  H8     H  N N 115 
DG  H1     H  N N 116 
DG  H21    H  N N 117 
DG  H22    H  N N 118 
DT  OP3    O  N N 119 
DT  P      P  N N 120 
DT  OP1    O  N N 121 
DT  OP2    O  N N 122 
DT  "O5'"  O  N N 123 
DT  "C5'"  C  N N 124 
DT  "C4'"  C  N R 125 
DT  "O4'"  O  N N 126 
DT  "C3'"  C  N S 127 
DT  "O3'"  O  N N 128 
DT  "C2'"  C  N N 129 
DT  "C1'"  C  N R 130 
DT  N1     N  N N 131 
DT  C2     C  N N 132 
DT  O2     O  N N 133 
DT  N3     N  N N 134 
DT  C4     C  N N 135 
DT  O4     O  N N 136 
DT  C5     C  N N 137 
DT  C7     C  N N 138 
DT  C6     C  N N 139 
DT  HOP3   H  N N 140 
DT  HOP2   H  N N 141 
DT  "H5'"  H  N N 142 
DT  "H5''" H  N N 143 
DT  "H4'"  H  N N 144 
DT  "H3'"  H  N N 145 
DT  "HO3'" H  N N 146 
DT  "H2'"  H  N N 147 
DT  "H2''" H  N N 148 
DT  "H1'"  H  N N 149 
DT  H3     H  N N 150 
DT  H71    H  N N 151 
DT  H72    H  N N 152 
DT  H73    H  N N 153 
DT  H6     H  N N 154 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CPT PT1   N1     sing N N 1   
CPT PT1   N2     sing N N 2   
CPT N1    H11    sing N N 3   
CPT N1    H12    sing N N 4   
CPT N1    H13    sing N N 5   
CPT N2    H21    sing N N 6   
CPT N2    H22    sing N N 7   
CPT N2    H23    sing N N 8   
CPT CL2   PT1    sing N N 9   
CPT CL1   PT1    sing N N 10  
DA  OP3   P      sing N N 11  
DA  OP3   HOP3   sing N N 12  
DA  P     OP1    doub N N 13  
DA  P     OP2    sing N N 14  
DA  P     "O5'"  sing N N 15  
DA  OP2   HOP2   sing N N 16  
DA  "O5'" "C5'"  sing N N 17  
DA  "C5'" "C4'"  sing N N 18  
DA  "C5'" "H5'"  sing N N 19  
DA  "C5'" "H5''" sing N N 20  
DA  "C4'" "O4'"  sing N N 21  
DA  "C4'" "C3'"  sing N N 22  
DA  "C4'" "H4'"  sing N N 23  
DA  "O4'" "C1'"  sing N N 24  
DA  "C3'" "O3'"  sing N N 25  
DA  "C3'" "C2'"  sing N N 26  
DA  "C3'" "H3'"  sing N N 27  
DA  "O3'" "HO3'" sing N N 28  
DA  "C2'" "C1'"  sing N N 29  
DA  "C2'" "H2'"  sing N N 30  
DA  "C2'" "H2''" sing N N 31  
DA  "C1'" N9     sing N N 32  
DA  "C1'" "H1'"  sing N N 33  
DA  N9    C8     sing Y N 34  
DA  N9    C4     sing Y N 35  
DA  C8    N7     doub Y N 36  
DA  C8    H8     sing N N 37  
DA  N7    C5     sing Y N 38  
DA  C5    C6     sing Y N 39  
DA  C5    C4     doub Y N 40  
DA  C6    N6     sing N N 41  
DA  C6    N1     doub Y N 42  
DA  N6    H61    sing N N 43  
DA  N6    H62    sing N N 44  
DA  N1    C2     sing Y N 45  
DA  C2    N3     doub Y N 46  
DA  C2    H2     sing N N 47  
DA  N3    C4     sing Y N 48  
DC  OP3   P      sing N N 49  
DC  OP3   HOP3   sing N N 50  
DC  P     OP1    doub N N 51  
DC  P     OP2    sing N N 52  
DC  P     "O5'"  sing N N 53  
DC  OP2   HOP2   sing N N 54  
DC  "O5'" "C5'"  sing N N 55  
DC  "C5'" "C4'"  sing N N 56  
DC  "C5'" "H5'"  sing N N 57  
DC  "C5'" "H5''" sing N N 58  
DC  "C4'" "O4'"  sing N N 59  
DC  "C4'" "C3'"  sing N N 60  
DC  "C4'" "H4'"  sing N N 61  
DC  "O4'" "C1'"  sing N N 62  
DC  "C3'" "O3'"  sing N N 63  
DC  "C3'" "C2'"  sing N N 64  
DC  "C3'" "H3'"  sing N N 65  
DC  "O3'" "HO3'" sing N N 66  
DC  "C2'" "C1'"  sing N N 67  
DC  "C2'" "H2'"  sing N N 68  
DC  "C2'" "H2''" sing N N 69  
DC  "C1'" N1     sing N N 70  
DC  "C1'" "H1'"  sing N N 71  
DC  N1    C2     sing N N 72  
DC  N1    C6     sing N N 73  
DC  C2    O2     doub N N 74  
DC  C2    N3     sing N N 75  
DC  N3    C4     doub N N 76  
DC  C4    N4     sing N N 77  
DC  C4    C5     sing N N 78  
DC  N4    H41    sing N N 79  
DC  N4    H42    sing N N 80  
DC  C5    C6     doub N N 81  
DC  C5    H5     sing N N 82  
DC  C6    H6     sing N N 83  
DG  OP3   P      sing N N 84  
DG  OP3   HOP3   sing N N 85  
DG  P     OP1    doub N N 86  
DG  P     OP2    sing N N 87  
DG  P     "O5'"  sing N N 88  
DG  OP2   HOP2   sing N N 89  
DG  "O5'" "C5'"  sing N N 90  
DG  "C5'" "C4'"  sing N N 91  
DG  "C5'" "H5'"  sing N N 92  
DG  "C5'" "H5''" sing N N 93  
DG  "C4'" "O4'"  sing N N 94  
DG  "C4'" "C3'"  sing N N 95  
DG  "C4'" "H4'"  sing N N 96  
DG  "O4'" "C1'"  sing N N 97  
DG  "C3'" "O3'"  sing N N 98  
DG  "C3'" "C2'"  sing N N 99  
DG  "C3'" "H3'"  sing N N 100 
DG  "O3'" "HO3'" sing N N 101 
DG  "C2'" "C1'"  sing N N 102 
DG  "C2'" "H2'"  sing N N 103 
DG  "C2'" "H2''" sing N N 104 
DG  "C1'" N9     sing N N 105 
DG  "C1'" "H1'"  sing N N 106 
DG  N9    C8     sing Y N 107 
DG  N9    C4     sing Y N 108 
DG  C8    N7     doub Y N 109 
DG  C8    H8     sing N N 110 
DG  N7    C5     sing Y N 111 
DG  C5    C6     sing N N 112 
DG  C5    C4     doub Y N 113 
DG  C6    O6     doub N N 114 
DG  C6    N1     sing N N 115 
DG  N1    C2     sing N N 116 
DG  N1    H1     sing N N 117 
DG  C2    N2     sing N N 118 
DG  C2    N3     doub N N 119 
DG  N2    H21    sing N N 120 
DG  N2    H22    sing N N 121 
DG  N3    C4     sing N N 122 
DT  OP3   P      sing N N 123 
DT  OP3   HOP3   sing N N 124 
DT  P     OP1    doub N N 125 
DT  P     OP2    sing N N 126 
DT  P     "O5'"  sing N N 127 
DT  OP2   HOP2   sing N N 128 
DT  "O5'" "C5'"  sing N N 129 
DT  "C5'" "C4'"  sing N N 130 
DT  "C5'" "H5'"  sing N N 131 
DT  "C5'" "H5''" sing N N 132 
DT  "C4'" "O4'"  sing N N 133 
DT  "C4'" "C3'"  sing N N 134 
DT  "C4'" "H4'"  sing N N 135 
DT  "O4'" "C1'"  sing N N 136 
DT  "C3'" "O3'"  sing N N 137 
DT  "C3'" "C2'"  sing N N 138 
DT  "C3'" "H3'"  sing N N 139 
DT  "O3'" "HO3'" sing N N 140 
DT  "C2'" "C1'"  sing N N 141 
DT  "C2'" "H2'"  sing N N 142 
DT  "C2'" "H2''" sing N N 143 
DT  "C1'" N1     sing N N 144 
DT  "C1'" "H1'"  sing N N 145 
DT  N1    C2     sing N N 146 
DT  N1    C6     sing N N 147 
DT  C2    O2     doub N N 148 
DT  C2    N3     sing N N 149 
DT  N3    C4     sing N N 150 
DT  N3    H3     sing N N 151 
DT  C4    O4     doub N N 152 
DT  C4    C5     sing N N 153 
DT  C5    C7     sing N N 154 
DT  C5    C6     doub N N 155 
DT  C7    H71    sing N N 156 
DT  C7    H72    sing N N 157 
DT  C7    H73    sing N N 158 
DT  C6    H6     sing N N 159 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
1DDP 'double helix'         
1DDP 'b-form double helix'  
1DDP 'mismatched base pair' 
1DDP 'internal loop'        
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 B DG 10 1_555 0.984  -0.347 0.657 -12.460 -2.647 -1.696 1 A_DC1:DG10_B A 1  ? B 10 ? 19 1 
1 A DA 2  1_555 B DT 9  1_555 -0.343 -0.186 0.608 -1.699  -8.707 0.415  2 A_DA2:DT9_B  A 2  ? B 9  ? 20 1 
1 A DT 3  1_555 B DA 8  1_555 0.150  -0.082 0.494 1.136   -6.778 0.464  3 A_DT3:DA8_B  A 3  ? B 8  ? 20 1 
1 A DA 4  1_555 B DT 7  1_555 0.256  0.007  0.596 19.716  -5.088 -1.971 4 A_DA4:DT7_B  A 4  ? B 7  ? 20 1 
1 A DT 7  1_555 B DA 4  1_555 -0.261 0.004  0.605 -19.467 -4.908 -1.922 5 A_DT7:DA4_B  A 7  ? B 4  ? 20 1 
1 A DA 8  1_555 B DT 3  1_555 -0.152 -0.084 0.504 -0.578  -6.791 0.488  6 A_DA8:DT3_B  A 8  ? B 3  ? 20 1 
1 A DT 9  1_555 B DA 2  1_555 0.322  -0.181 0.615 2.458   -8.721 0.941  7 A_DT9:DA2_B  A 9  ? B 2  ? 20 1 
1 A DG 10 1_555 B DC 1  1_555 -0.889 -0.330 0.693 13.179  -3.222 -2.843 8 A_DG10:DC1_B A 10 ? B 1  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1 1_555 B DG 10 1_555 A DA 2  1_555 B DT 9 1_555 0.016  -0.117 2.736 0.552  -2.925 40.261 0.106  0.029  2.738 -4.242 -0.800 
40.366 1 AA_DC1DA2:DT9DG10_BB A 1 ? B 10 ? A 2  ? B 9 ? 
1 A DA 2 1_555 B DT 9  1_555 A DT 3  1_555 B DA 8 1_555 0.107  -0.927 3.144 0.350  -0.675 33.093 -1.517 -0.131 3.162 -1.185 -0.615 
33.101 2 AA_DA2DT3:DA8DT9_BB  A 2 ? B 9  ? A 3  ? B 8 ? 
1 A DT 3 1_555 B DA 8  1_555 A DA 4  1_555 B DT 7 1_555 0.415  -0.762 2.589 -0.801 0.194  31.455 -1.434 -0.884 2.573 0.357  1.478  
31.465 3 AA_DT3DA4:DT7DA8_BB  A 3 ? B 8  ? A 4  ? B 7 ? 
1 A DT 7 1_555 B DA 4  1_555 A DA 8  1_555 B DT 3 1_555 -0.403 -0.773 2.578 0.838  0.049  31.418 -1.434 0.867  2.565 0.090  -1.548 
31.429 4 AA_DT7DA8:DT3DA4_BB  A 7 ? B 4  ? A 8  ? B 3 ? 
1 A DA 8 1_555 B DT 3  1_555 A DT 9  1_555 B DA 2 1_555 -0.055 -0.947 3.140 -0.420 -0.816 33.122 -1.528 0.027  3.163 -1.431 0.737  
33.135 5 AA_DA8DT9:DA2DT3_BB  A 8 ? B 3  ? A 9  ? B 2 ? 
1 A DT 9 1_555 B DA 2  1_555 A DG 10 1_555 B DC 1 1_555 -0.113 -0.198 2.714 -0.942 -2.728 41.028 -0.035 0.077  2.723 -3.887 1.342  
41.125 6 AA_DT9DG10:DC1DA2_BB A 9 ? B 2  ? A 10 ? B 1 ? 
# 
_atom_sites.entry_id                    1DDP 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
H  
N  
O  
P  
PT 
# 
loop_