HEADER ELECTRON TRANSPORT 12-NOV-99 1DE2 TITLE NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAREDOXIN; COMPND 3 CHAIN: A; COMPND 4 OTHER_DETAILS: REDUCED SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN BACTERIOPHAGE T4 KEYWDS GLUTAREDOXIN, ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR Y.WANG,D.S.WISHART REVDAT 5 16-FEB-22 1DE2 1 REMARK REVDAT 4 24-FEB-09 1DE2 1 VERSN REVDAT 3 30-MAR-04 1DE2 1 JRNL REVDAT 2 30-JUN-00 1DE2 1 SOURCE EXPDTA REVDAT 1 24-NOV-99 1DE2 0 JRNL AUTH Y.WANG,G.AMEGBEY,D.S.WISHART JRNL TITL SOLUTION STRUCTURES OF REDUCED AND OXIDIZED BACTERIOPHAGE T4 JRNL TITL 2 GLUTAREDOXIN. JRNL REF J.BIOMOL.NMR V. 29 85 2004 JRNL REFN ISSN 0925-2738 JRNL PMID 15017142 JRNL DOI 10.1023/B:JNMR.0000019506.30351.CA REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1, X-PLOR 3.85 REMARK 3 AUTHORS : VARIAN (VNMR), BRUNGER A. T. (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1DE2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-99. REMARK 100 THE DEPOSITION ID IS D_1000010007. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM T4 GLUTAREDOXIN; 10MM REMARK 210 DTT,50MM PH7.0 PHOSPHATE BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY,TOCSY,DQF_COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR 3.85 REMARK 210 METHOD USED : SIMULATED ANNEALING MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : BACK CALCULATED DATA AGREE WITH REMARK 210 EXPERIMENTAL NOESY SPECTRUM, REMARK 210 STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY,STRUCTURES REMARK 210 WITH FAVORABLE NON-BOND ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 27 REMARK 210 REMARK 210 REMARK: THE STRUCTURES WERE DETERMINED USING STANDARD 2D REMARK 210 HOMONUCLEAR TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 9 -172.10 -172.78 REMARK 500 1 CYS A 14 110.59 -177.88 REMARK 500 1 LYS A 28 52.70 77.93 REMARK 500 1 MET A 37 77.39 -155.70 REMARK 500 1 LYS A 40 -8.87 -47.40 REMARK 500 1 ARG A 57 30.46 -150.48 REMARK 500 1 ASP A 58 -143.62 -121.08 REMARK 500 1 ASP A 72 41.14 -161.61 REMARK 500 1 PHE A 79 -70.64 -72.42 REMARK 500 2 ASP A 8 -73.70 -84.73 REMARK 500 2 SER A 9 -33.84 167.83 REMARK 500 2 CYS A 14 112.12 -167.98 REMARK 500 2 LYS A 28 55.95 74.49 REMARK 500 2 PRO A 38 43.65 -80.96 REMARK 500 2 ARG A 57 31.46 -150.33 REMARK 500 2 ASP A 58 -147.19 -121.01 REMARK 500 2 SER A 74 159.85 179.85 REMARK 500 2 PHE A 79 -70.58 -65.96 REMARK 500 2 PHE A 86 -70.61 -96.71 REMARK 500 3 SER A 9 -38.27 166.31 REMARK 500 3 CYS A 14 117.75 -174.30 REMARK 500 3 PHE A 79 -70.98 -72.27 REMARK 500 4 SER A 9 -171.62 -175.36 REMARK 500 4 CYS A 14 92.83 -177.11 REMARK 500 4 LYS A 28 45.59 76.13 REMARK 500 4 PHE A 43 170.14 -56.99 REMARK 500 4 ARG A 57 26.78 -150.55 REMARK 500 4 ASP A 58 -153.71 -121.67 REMARK 500 4 SER A 74 118.97 179.58 REMARK 500 5 SER A 9 -22.85 81.82 REMARK 500 5 HIS A 12 108.48 -166.64 REMARK 500 5 LYS A 13 134.23 -39.39 REMARK 500 5 CYS A 14 109.23 -166.23 REMARK 500 5 LYS A 28 57.32 72.53 REMARK 500 5 LEU A 63 171.40 -49.84 REMARK 500 5 ASP A 72 38.80 -165.43 REMARK 500 5 PHE A 86 -70.31 -92.08 REMARK 500 6 PHE A 2 120.92 -39.85 REMARK 500 6 CYS A 14 95.08 174.00 REMARK 500 6 PRO A 30 174.83 -45.72 REMARK 500 6 ALA A 70 156.46 -47.88 REMARK 500 6 SER A 74 116.51 -164.55 REMARK 500 7 SER A 9 -37.49 166.28 REMARK 500 7 CYS A 14 107.83 179.98 REMARK 500 7 LYS A 28 38.70 76.16 REMARK 500 7 ARG A 57 31.74 -150.33 REMARK 500 7 ASP A 58 -146.52 -121.01 REMARK 500 7 PHE A 79 -70.35 -80.88 REMARK 500 8 PHE A 2 110.06 -39.78 REMARK 500 8 ASP A 8 -76.98 -64.91 REMARK 500 REMARK 500 THIS ENTRY HAS 227 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DE1 RELATED DB: PDB REMARK 900 OXIDIZED BACTERIOPHAGE T4 GLUTAREDOXIN DBREF 1DE2 A 1 87 UNP P00276 GLRX_BPT4 1 87 SEQRES 1 A 87 MET PHE LYS VAL TYR GLY TYR ASP SER ASN ILE HIS LYS SEQRES 2 A 87 CYS VAL TYR CYS ASP ASN ALA LYS ARG LEU LEU THR VAL SEQRES 3 A 87 LYS LYS GLN PRO PHE GLU PHE ILE ASN ILE MET PRO GLU SEQRES 4 A 87 LYS GLY VAL PHE ASP ASP GLU LYS ILE ALA GLU LEU LEU SEQRES 5 A 87 THR LYS LEU GLY ARG ASP THR GLN ILE GLY LEU THR MET SEQRES 6 A 87 PRO GLN VAL PHE ALA PRO ASP GLY SER HIS ILE GLY GLY SEQRES 7 A 87 PHE ASP GLN LEU ARG GLU TYR PHE LYS HELIX 1 1 VAL A 15 LYS A 28 1 14 HELIX 2 2 ASP A 44 GLY A 56 1 13 HELIX 3 3 GLY A 78 LYS A 87 1 10 SHEET 1 A 4 PHE A 31 ASN A 35 0 SHEET 2 A 4 PHE A 2 GLY A 6 1 O PHE A 2 N GLU A 32 SHEET 3 A 4 GLN A 67 PHE A 69 -1 O GLN A 67 N TYR A 5 SHEET 4 A 4 HIS A 75 GLY A 77 -1 N ILE A 76 O VAL A 68 CISPEP 1 MET A 65 PRO A 66 1 0.14 CISPEP 2 MET A 65 PRO A 66 2 0.23 CISPEP 3 MET A 65 PRO A 66 3 0.25 CISPEP 4 MET A 65 PRO A 66 4 0.36 CISPEP 5 MET A 65 PRO A 66 5 0.35 CISPEP 6 MET A 65 PRO A 66 6 0.49 CISPEP 7 MET A 65 PRO A 66 7 0.55 CISPEP 8 MET A 65 PRO A 66 8 0.31 CISPEP 9 MET A 65 PRO A 66 9 0.24 CISPEP 10 MET A 65 PRO A 66 10 0.55 CISPEP 11 MET A 65 PRO A 66 11 0.36 CISPEP 12 MET A 65 PRO A 66 12 0.47 CISPEP 13 MET A 65 PRO A 66 13 0.42 CISPEP 14 MET A 65 PRO A 66 14 0.27 CISPEP 15 MET A 65 PRO A 66 15 0.43 CISPEP 16 MET A 65 PRO A 66 16 0.24 CISPEP 17 MET A 65 PRO A 66 17 0.52 CISPEP 18 MET A 65 PRO A 66 18 0.38 CISPEP 19 MET A 65 PRO A 66 19 0.61 CISPEP 20 MET A 65 PRO A 66 20 0.40 CISPEP 21 MET A 65 PRO A 66 21 0.61 CISPEP 22 MET A 65 PRO A 66 22 0.43 CISPEP 23 MET A 65 PRO A 66 23 0.53 CISPEP 24 MET A 65 PRO A 66 24 0.53 CISPEP 25 MET A 65 PRO A 66 25 0.46 CISPEP 26 MET A 65 PRO A 66 26 0.35 CISPEP 27 MET A 65 PRO A 66 27 0.47 CISPEP 28 MET A 65 PRO A 66 28 0.28 CISPEP 29 MET A 65 PRO A 66 29 0.53 CISPEP 30 MET A 65 PRO A 66 30 0.47 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1