HEADER HYDROLASE 15-NOV-99 1DEU TITLE CRYSTAL STRUCTURE OF HUMAN PROCATHEPSIN X: A CYSTEINE PROTEASE WITH TITLE 2 THE PROREGION COVALENTLY LINKED TO THE ACTIVE SITE CYSTEINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROCATHEPSIN X; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS CYSTEINE PROTEASE, PROCATHEPSIN X, PROREGION, PROSEGMENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.SIVARAMAN,D.K.NAGLER,R.ZHANG,R.MENARD,M.CYGLER REVDAT 6 13-NOV-24 1DEU 1 REMARK REVDAT 5 09-AUG-23 1DEU 1 SEQADV REVDAT 4 04-OCT-17 1DEU 1 REMARK REVDAT 3 13-JUL-11 1DEU 1 VERSN REVDAT 2 24-FEB-09 1DEU 1 VERSN REVDAT 1 18-FEB-00 1DEU 0 JRNL AUTH J.SIVARAMAN,D.K.NAGLER,R.ZHANG,R.MENARD,M.CYGLER JRNL TITL CRYSTAL STRUCTURE OF HUMAN PROCATHEPSIN X: A CYSTEINE JRNL TITL 2 PROTEASE WITH THE PROREGION COVALENTLY LINKED TO THE ACTIVE JRNL TITL 3 SITE CYSTEINE. JRNL REF J.MOL.BIOL. V. 295 939 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10656802 JRNL DOI 10.1006/JMBI.1999.3410 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 74610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1849 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10758 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 270 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4193 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 428 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.17 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.19 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.034 REMARK 3 BOND ANGLES (DEGREES) : 2.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.710 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.550 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 0.980 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 0.670 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 1.080 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 39.26 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1DEU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-NOV-99. REMARK 100 THE DEPOSITION ID IS D_1000010021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.007 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : ADX REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82047 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.50 REMARK 200 R MERGE FOR SHELL (I) : 0.20800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: CATHEPSIN B (PDB CODE 1HUC), REFERENCE: MUSIL ET REMARK 200 AL EMBO.J 1991, 10, 2321-2330 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 300 MM (NH4)2SO4, 12% PEG4000, PH 4.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.14667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.57333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.57333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 113.14667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 42.41000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 73.45627 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -56.57333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 4P REMARK 465 ARG A 5P REMARK 465 GLY B 16P REMARK 465 ASP B 17P REMARK 465 GLY B 18P REMARK 465 LEU B 19P REMARK 465 ALA B 20P REMARK 465 PRO B 21P REMARK 465 LEU B 22P REMARK 465 GLY B 23P REMARK 465 ARG B 24P REMARK 465 THR B 25P REMARK 465 THR B 26P REMARK 465 TYR B 27P REMARK 465 PRO B 28P REMARK 465 ARG B 29P REMARK 465 PRO B 30P REMARK 465 HIS B 31P REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 5P CG CD NE CZ NH1 NH2 REMARK 470 ARG B 6P CG CD NE CZ NH1 NH2 REMARK 470 GLN B 8P CG CD OE1 NE2 REMARK 470 ARG B 15P CG CD NE CZ NH1 NH2 REMARK 470 GLU B 32P CG CD OE1 OE2 REMARK 470 TYR B 33P CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 LYS B 223 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C GLU B 32P O SER B 134 1.59 REMARK 500 N ARG B 15P O HOH B 446 1.73 REMARK 500 O ARG B 15P O HOH B 438 1.89 REMARK 500 C GLU B 32P CA LEU B 135 1.90 REMARK 500 C GLU B 32P C SER B 134 1.91 REMARK 500 C GLU B 32P N LEU B 135 1.96 REMARK 500 CA GLU B 32P O SER B 134 1.97 REMARK 500 CB ARG B 15P O HOH B 438 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU B 14P N LEU B 14P CA 0.323 REMARK 500 LEU B 14P CA LEU B 14P C 0.384 REMARK 500 LEU B 14P C LEU B 14P O 0.180 REMARK 500 LEU B 14P C ARG B 15P N 0.312 REMARK 500 ARG B 15P N ARG B 15P CA 1.304 REMARK 500 ARG B 15P CA ARG B 15P CB 1.596 REMARK 500 ARG B 15P CA ARG B 15P C 1.945 REMARK 500 ARG B 15P C ARG B 15P O 5.307 REMARK 500 GLU B 32P N GLU B 32P CA 1.570 REMARK 500 GLU B 32P CA GLU B 32P CB 2.139 REMARK 500 GLU B 32P CA GLU B 32P C -0.170 REMARK 500 GLU B 32P C GLU B 32P O 2.822 REMARK 500 TYR B 33P N TYR B 33P CA 1.055 REMARK 500 TYR B 33P CA TYR B 33P CB 0.629 REMARK 500 TYR B 33P CA TYR B 33P C 1.019 REMARK 500 TYR B 33P C TYR B 33P O 0.301 REMARK 500 TYR B 33P C LEU B 34P N 0.189 REMARK 500 LEU B 34P N LEU B 34P CA 0.416 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 14P N - CA - CB ANGL. DEV. = -13.1 DEGREES REMARK 500 LEU B 14P CA - CB - CG ANGL. DEV. = 38.2 DEGREES REMARK 500 LEU B 14P CB - CG - CD2 ANGL. DEV. = -15.6 DEGREES REMARK 500 LEU B 14P N - CA - C ANGL. DEV. = -17.4 DEGREES REMARK 500 LEU B 14P CA - C - O ANGL. DEV. = -33.4 DEGREES REMARK 500 LEU B 14P CA - C - N ANGL. DEV. = 15.7 DEGREES REMARK 500 LEU B 14P O - C - N ANGL. DEV. = 17.2 DEGREES REMARK 500 ARG B 15P C - N - CA ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG B 15P CB - CA - C ANGL. DEV. = 48.9 DEGREES REMARK 500 ARG B 15P N - CA - CB ANGL. DEV. = 36.9 DEGREES REMARK 500 ARG B 15P N - CA - C ANGL. DEV. = -57.9 DEGREES REMARK 500 ARG B 15P CA - C - O ANGL. DEV. = 108.1 DEGREES REMARK 500 GLU B 32P CB - CA - C ANGL. DEV. = -35.1 DEGREES REMARK 500 GLU B 32P N - CA - CB ANGL. DEV. = 58.2 DEGREES REMARK 500 GLU B 32P CA - C - O ANGL. DEV. = -48.8 DEGREES REMARK 500 TYR B 33P CB - CA - C ANGL. DEV. = -42.5 DEGREES REMARK 500 TYR B 33P N - CA - CB ANGL. DEV. = 14.4 DEGREES REMARK 500 TYR B 33P N - CA - C ANGL. DEV. = 52.7 DEGREES REMARK 500 TYR B 33P CA - C - N ANGL. DEV. = 20.7 DEGREES REMARK 500 TYR B 33P O - C - N ANGL. DEV. = -35.3 DEGREES REMARK 500 LEU B 135 CB - CG - CD1 ANGL. DEV. = -11.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 33P 16.71 -141.26 REMARK 500 ASN A 9 82.77 -159.88 REMARK 500 ASN A 94 98.89 -164.03 REMARK 500 TYR A 219 150.08 -48.47 REMARK 500 LEU B 14P -124.44 -133.92 REMARK 500 ASN B 9 92.28 -162.67 REMARK 500 ASN B 94 97.81 -166.80 REMARK 500 ASP B 191 -114.92 66.48 REMARK 500 HIS B 234 110.94 -160.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 TYR B 33P 19.25 REMARK 500 ILE B 24 12.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 1DEU A 4P 242 UNP Q9UBR2 CATZ_HUMAN 27 303 DBREF 1DEU B 4P 242 UNP Q9UBR2 CATZ_HUMAN 27 303 SEQADV 1DEU THR A 25P UNP Q9UBR2 SER 48 CONFLICT SEQADV 1DEU ALA A 68 UNP Q9UBR2 ARG 129 SEE REMARK 999 SEQADV 1DEU PRO A 89 UNP Q9UBR2 SER 150 CONFLICT SEQADV 1DEU THR B 25P UNP Q9UBR2 SER 48 CONFLICT SEQADV 1DEU ALA B 68 UNP Q9UBR2 ARG 129 SEE REMARK 999 SEQADV 1DEU PRO B 89 UNP Q9UBR2 SER 150 CONFLICT SEQRES 1 A 277 PHE ARG ARG GLY GLN THR CYS TYR ARG PRO LEU ARG GLY SEQRES 2 A 277 ASP GLY LEU ALA PRO LEU GLY ARG THR THR TYR PRO ARG SEQRES 3 A 277 PRO HIS GLU TYR LEU SER PRO ALA ASP LEU PRO LYS SER SEQRES 4 A 277 TRP ASP TRP ARG ASN VAL ASP GLY VAL ASN TYR ALA SER SEQRES 5 A 277 ILE THR ARG ASN GLN HIS ILE PRO GLN TYR CYS GLY SER SEQRES 6 A 277 CYS TRP ALA HIS ALA SER THR SER ALA MET ALA ASP ARG SEQRES 7 A 277 ILE ASN ILE LYS ARG LYS GLY ALA TRP PRO SER THR LEU SEQRES 8 A 277 LEU SER VAL GLN ASN VAL ILE ASP CYS GLY ASN ALA GLY SEQRES 9 A 277 SER CYS GLU GLY GLY ASN ASP LEU SER VAL TRP ASP TYR SEQRES 10 A 277 ALA HIS GLN HIS GLY ILE PRO ASP GLU THR CYS ASN ASN SEQRES 11 A 277 TYR GLN ALA LYS ASP GLN GLU CYS ASP LYS PHE ASN GLN SEQRES 12 A 277 CYS GLY THR CYS ASN GLU PHE LYS GLU CYS HIS ALA ILE SEQRES 13 A 277 ARG ASN TYR THR LEU TRP ARG VAL GLY ASP TYR GLY SER SEQRES 14 A 277 LEU SER GLY ARG GLU LYS MET MET ALA GLU ILE TYR ALA SEQRES 15 A 277 ASN GLY PRO ILE SER CYS GLY ILE MET ALA THR GLU ARG SEQRES 16 A 277 LEU ALA ASN TYR THR GLY GLY ILE TYR ALA GLU TYR GLN SEQRES 17 A 277 ASP THR THR TYR ILE ASN HIS VAL VAL SER VAL ALA GLY SEQRES 18 A 277 TRP GLY ILE SER ASP GLY THR GLU TYR TRP ILE VAL ARG SEQRES 19 A 277 ASN SER TRP GLY GLU PRO TRP GLY GLU ARG GLY TRP LEU SEQRES 20 A 277 ARG ILE VAL THR SER THR TYR LYS ASP GLY LYS GLY ALA SEQRES 21 A 277 ARG TYR ASN LEU ALA ILE GLU GLU HIS CYS THR PHE GLY SEQRES 22 A 277 ASP PRO ILE VAL SEQRES 1 B 277 PHE ARG ARG GLY GLN THR CYS TYR ARG PRO LEU ARG GLY SEQRES 2 B 277 ASP GLY LEU ALA PRO LEU GLY ARG THR THR TYR PRO ARG SEQRES 3 B 277 PRO HIS GLU TYR LEU SER PRO ALA ASP LEU PRO LYS SER SEQRES 4 B 277 TRP ASP TRP ARG ASN VAL ASP GLY VAL ASN TYR ALA SER SEQRES 5 B 277 ILE THR ARG ASN GLN HIS ILE PRO GLN TYR CYS GLY SER SEQRES 6 B 277 CYS TRP ALA HIS ALA SER THR SER ALA MET ALA ASP ARG SEQRES 7 B 277 ILE ASN ILE LYS ARG LYS GLY ALA TRP PRO SER THR LEU SEQRES 8 B 277 LEU SER VAL GLN ASN VAL ILE ASP CYS GLY ASN ALA GLY SEQRES 9 B 277 SER CYS GLU GLY GLY ASN ASP LEU SER VAL TRP ASP TYR SEQRES 10 B 277 ALA HIS GLN HIS GLY ILE PRO ASP GLU THR CYS ASN ASN SEQRES 11 B 277 TYR GLN ALA LYS ASP GLN GLU CYS ASP LYS PHE ASN GLN SEQRES 12 B 277 CYS GLY THR CYS ASN GLU PHE LYS GLU CYS HIS ALA ILE SEQRES 13 B 277 ARG ASN TYR THR LEU TRP ARG VAL GLY ASP TYR GLY SER SEQRES 14 B 277 LEU SER GLY ARG GLU LYS MET MET ALA GLU ILE TYR ALA SEQRES 15 B 277 ASN GLY PRO ILE SER CYS GLY ILE MET ALA THR GLU ARG SEQRES 16 B 277 LEU ALA ASN TYR THR GLY GLY ILE TYR ALA GLU TYR GLN SEQRES 17 B 277 ASP THR THR TYR ILE ASN HIS VAL VAL SER VAL ALA GLY SEQRES 18 B 277 TRP GLY ILE SER ASP GLY THR GLU TYR TRP ILE VAL ARG SEQRES 19 B 277 ASN SER TRP GLY GLU PRO TRP GLY GLU ARG GLY TRP LEU SEQRES 20 B 277 ARG ILE VAL THR SER THR TYR LYS ASP GLY LYS GLY ALA SEQRES 21 B 277 ARG TYR ASN LEU ALA ILE GLU GLU HIS CYS THR PHE GLY SEQRES 22 B 277 ASP PRO ILE VAL FORMUL 3 HOH *428(H2 O) HELIX 1 2 SER A 30 ARG A 48 1 19 HELIX 2 3 SER A 58 GLY A 66 1 9 HELIX 3 4 ASN A 75 HIS A 86 1 12 HELIX 4 5 GLU A 91 ASN A 94 5 4 HELIX 5 6 ASP A 104 CYS A 109 1 6 HELIX 6 7 GLY A 137 GLY A 149 1 13 HELIX 7 8 THR A 158 ASN A 163 1 6 HELIX 8 9 THR A 218 LYS A 223 1 6 HELIX 9 10 GLY A 224 TYR A 227 5 4 HELIX 10 12 SER B 30 ARG B 48 1 19 HELIX 11 13 SER B 58 GLY B 66 1 9 HELIX 12 14 ASN B 75 HIS B 86 1 12 HELIX 13 15 GLU B 91 ASN B 94 5 4 HELIX 14 16 ASP B 104 CYS B 109 1 6 HELIX 15 17 GLY B 137 GLY B 149 1 13 HELIX 16 18 THR B 158 ASN B 163 1 6 HELIX 17 19 THR B 218 LYS B 223 1 6 HELIX 18 20 GLY B 224 TYR B 227 5 4 SHEET 1 A 5 ILE A 168 TYR A 169 0 SHEET 2 A 5 TRP A 211 VAL A 215 1 O ARG A 213 N TYR A 169 SHEET 3 A 5 THR A 193 ARG A 199 -1 N TRP A 196 O ILE A 214 SHEET 4 A 5 HIS A 180 SER A 190 -1 O SER A 183 N ARG A 199 SHEET 5 A 5 TRP A 5 ASP A 6 -1 N TRP A 5 O TRP A 187 SHEET 1 B 7 ILE A 168 TYR A 169 0 SHEET 2 B 7 TRP A 211 VAL A 215 1 O ARG A 213 N TYR A 169 SHEET 3 B 7 THR A 193 ARG A 199 -1 N TRP A 196 O ILE A 214 SHEET 4 B 7 HIS A 180 SER A 190 -1 O SER A 183 N ARG A 199 SHEET 5 B 7 ILE A 151 ILE A 155 -1 N ILE A 151 O VAL A 184 SHEET 6 B 7 CYS A 235 PRO A 240 -1 N THR A 236 O SER A 152 SHEET 7 B 7 VAL A 129 LEU A 135 -1 N GLY A 130 O ASP A 239 SHEET 1 C 2 GLY A 69 SER A 70 0 SHEET 2 C 2 GLY A 73 GLY A 74 -1 O GLY A 73 N SER A 70 SHEET 1 D 2 GLY A 110 GLU A 114 0 SHEET 2 D 2 GLU A 117 ALA A 120 -1 N GLU A 117 O GLU A 114 SHEET 1 E 5 ILE B 168 TYR B 169 0 SHEET 2 E 5 TRP B 211 VAL B 215 1 O ARG B 213 N TYR B 169 SHEET 3 E 5 THR B 193 ARG B 199 -1 N TRP B 196 O ILE B 214 SHEET 4 E 5 HIS B 180 SER B 190 -1 O SER B 183 N ARG B 199 SHEET 5 E 5 TRP B 5 ASP B 6 -1 N TRP B 5 O TRP B 187 SHEET 1 F 7 ILE B 168 TYR B 169 0 SHEET 2 F 7 TRP B 211 VAL B 215 1 O ARG B 213 N TYR B 169 SHEET 3 F 7 THR B 193 ARG B 199 -1 N TRP B 196 O ILE B 214 SHEET 4 F 7 HIS B 180 SER B 190 -1 O SER B 183 N ARG B 199 SHEET 5 F 7 ILE B 151 ILE B 155 -1 N ILE B 151 O VAL B 184 SHEET 6 F 7 CYS B 235 PRO B 240 -1 N THR B 236 O SER B 152 SHEET 7 F 7 VAL B 129 LEU B 135 -1 N GLY B 130 O ASP B 239 SHEET 1 G 2 GLY B 69 SER B 70 0 SHEET 2 G 2 GLY B 73 GLY B 74 -1 O GLY B 73 N SER B 70 SHEET 1 H 2 GLY B 110 GLU B 114 0 SHEET 2 H 2 GLU B 117 ALA B 120 -1 N GLU B 117 O GLU B 114 SSBOND 1 CYS A 10P CYS A 31 1555 1555 2.53 SSBOND 2 CYS A 28 CYS A 71 1555 1555 2.04 SSBOND 3 CYS A 65 CYS A 103 1555 1555 2.03 SSBOND 4 CYS A 93 CYS A 109 1555 1555 2.03 SSBOND 5 CYS A 112 CYS A 118 1555 1555 2.03 SSBOND 6 CYS A 153 CYS A 235 1555 1555 2.03 SSBOND 7 CYS B 10P CYS B 31 1555 1555 2.58 SSBOND 8 CYS B 28 CYS B 71 1555 1555 2.03 SSBOND 9 CYS B 65 CYS B 103 1555 1555 2.03 SSBOND 10 CYS B 93 CYS B 109 1555 1555 2.03 SSBOND 11 CYS B 112 CYS B 118 1555 1555 2.03 SSBOND 12 CYS B 153 CYS B 235 1555 1555 2.03 CISPEP 1 ILE A 24 PRO A 25 0 4.53 CISPEP 2 TRP A 52 PRO A 53 0 0.12 CISPEP 3 ILE B 24 PRO B 25 0 21.59 CISPEP 4 TRP B 52 PRO B 53 0 -2.83 CRYST1 84.820 84.820 169.720 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011790 0.006807 0.000000 0.00000 SCALE2 0.000000 0.013614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005892 0.00000