HEADER STRUCTURAL PROTEIN 18-NOV-99 1DFC TITLE CRYSTAL STRUCTURE OF HUMAN FASCIN, AN ACTIN-CROSSLINKING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FASCIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FULL-LENGTH PROTEIN; COMPND 5 SYNONYM: ACTIN BUNDLING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS BETA-TREFOIL FOLD FOR ALL FOUR DOMAINS, STRUCTURAL GENOMICS, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, NYSGXRC, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,S.ONO,F.MATSUMURA,S.C.ALMO,S.K.BURLEY,NEW AUTHOR 2 YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 07-FEB-24 1DFC 1 REMARK REVDAT 5 03-FEB-21 1DFC 1 AUTHOR REVDAT 4 28-JUL-10 1DFC 1 JRNL REVDAT 3 24-FEB-09 1DFC 1 VERSN REVDAT 2 25-JAN-05 1DFC 1 AUTHOR KEYWDS REMARK REVDAT 1 22-NOV-00 1DFC 0 JRNL AUTH R.S.SEDEH,A.A.FEDOROV,E.V.FEDOROV,S.ONO,F.MATSUMURA, JRNL AUTH 2 S.C.ALMO,M.BATHE JRNL TITL STRUCTURE, EVOLUTIONARY CONSERVATION, AND CONFORMATIONAL JRNL TITL 2 DYNAMICS OF HOMO SAPIENS FASCIN-1, AN F-ACTIN CROSSLINKING JRNL TITL 3 PROTEIN. JRNL REF J.MOL.BIOL. V. 400 589 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20434460 JRNL DOI 10.1016/J.JMB.2010.04.043 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.ONO,Y.YAMAKITA,S.YAMASHIRO,P.T.MATSUDAIRA,J.R.GNARRA, REMARK 1 AUTH 2 T.OBINATA,F.MATSUMURA REMARK 1 TITL IDENTIFICATION OF AN ACTIN BINDING REGION AND A PROTEIN REMARK 1 TITL 2 KINASE C PHOSPHORYLATION SITE ON HUMAN FASCIN REMARK 1 REF J.BIOL.CHEM. V. 272 2527 1997 REMARK 1 REFN ISSN 0021-9258 REMARK 1 DOI 10.1074/JBC.272.4.2527 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 83.6 REMARK 3 NUMBER OF REFLECTIONS : 18070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 945 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.39 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.147 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.560 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.257 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.309 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.123 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : 63.17 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1DFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-99. REMARK 100 THE DEPOSITION ID IS D_1000010038. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-97 REMARK 200 TEMPERATURE (KELVIN) : 291.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19147 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 23.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.2 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHASES V. 95, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, HEPES, DTT, SODIUM AZIDE , REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 82.71300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.84450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 82.71300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.84450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1001 REMARK 465 THR A 1002 REMARK 465 ALA A 1003 REMARK 465 ASN A 1004 REMARK 465 GLY A 1005 REMARK 465 THR A 1006 REMARK 465 ALA A 1007 REMARK 465 GLN A 1050 REMARK 465 PRO A 1051 REMARK 465 PRO A 1052 REMARK 465 ASP A 1053 REMARK 465 GLU A 1054 REMARK 465 ALA A 1055 REMARK 465 GLY A 1056 REMARK 465 SER A 1057 REMARK 465 ARG A 1276 REMARK 465 GLN A 1277 REMARK 465 GLY A 1278 REMARK 465 MET B 2001 REMARK 465 THR B 2002 REMARK 465 ALA B 2003 REMARK 465 ASN B 2004 REMARK 465 GLY B 2005 REMARK 465 THR B 2006 REMARK 465 ALA B 2007 REMARK 465 GLN B 2050 REMARK 465 PRO B 2051 REMARK 465 PRO B 2052 REMARK 465 ASP B 2053 REMARK 465 GLU B 2054 REMARK 465 ALA B 2055 REMARK 465 GLY B 2056 REMARK 465 SER B 2057 REMARK 465 ARG B 2276 REMARK 465 GLN B 2277 REMARK 465 GLY B 2278 REMARK 465 MET B 2279 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A1279 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 2205 OE1 GLU B 2207 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 1075 NH1 ARG B 2343 1565 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A1397 CB CYS A1397 SG -0.098 REMARK 500 CYS B2456 CB CYS B2456 SG -0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1383 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B2194 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A1029 -161.39 -55.10 REMARK 500 ALA A1035 63.42 -112.02 REMARK 500 LYS A1041 -159.62 -143.75 REMARK 500 HIS A1065 45.37 -76.69 REMARK 500 LEU A1066 3.98 -157.54 REMARK 500 CYS A1080 58.84 -170.93 REMARK 500 ASP A1097 -63.22 -13.87 REMARK 500 ARG A1100 -123.92 -132.39 REMARK 500 ARG A1109 -0.19 66.21 REMARK 500 GLU A1116 -100.14 7.81 REMARK 500 PRO A1140 1.56 -66.72 REMARK 500 ARG A1158 -92.09 -52.34 REMARK 500 ALA A1160 160.75 -32.50 REMARK 500 VAL A1165 74.45 -116.16 REMARK 500 ASP A1166 44.19 -144.32 REMARK 500 GLN A1182 -85.04 -112.19 REMARK 500 GLN A1184 10.05 51.01 REMARK 500 HIS A1198 -7.99 -53.56 REMARK 500 ARG A1217 69.89 -116.87 REMARK 500 SER A1218 98.22 59.46 REMARK 500 GLU A1227 -104.21 -66.97 REMARK 500 SER A1234 -109.36 -102.72 REMARK 500 GLU A1270 37.17 74.48 REMARK 500 THR A1311 43.23 -108.11 REMARK 500 THR A1320 -7.30 -51.82 REMARK 500 SER A1325 59.59 -93.88 REMARK 500 ALA A1332 -46.40 -21.99 REMARK 500 ARG A1341 75.32 -115.18 REMARK 500 ASP A1342 119.38 -8.69 REMARK 500 ARG A1343 -22.49 94.17 REMARK 500 GLN A1362 167.92 -44.96 REMARK 500 SER A1366 -70.28 -90.00 REMARK 500 VAL A1367 142.46 -32.09 REMARK 500 ALA A1370 118.16 -36.80 REMARK 500 ARG A1383 45.38 -163.04 REMARK 500 PRO A1384 1.89 -66.03 REMARK 500 ARG A1398 -164.46 -100.87 REMARK 500 LYS A1399 -100.83 -22.30 REMARK 500 VAL A1400 -8.81 -141.71 REMARK 500 THR A1403 146.44 -39.44 REMARK 500 ASN A1407 36.10 -148.36 REMARK 500 ASP A1420 53.37 38.71 REMARK 500 SER A1443 56.01 -100.07 REMARK 500 SER A1444 -115.23 -101.63 REMARK 500 ASN A1459 48.30 -144.19 REMARK 500 ALA A1475 -23.98 82.88 REMARK 500 PHE B2029 -160.72 -56.22 REMARK 500 PHE B2031 55.90 38.30 REMARK 500 ALA B2035 61.79 -110.66 REMARK 500 LYS B2041 -156.08 -142.83 REMARK 500 REMARK 500 THIS ENTRY HAS 89 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE A1452 0.07 SIDE CHAIN REMARK 500 TYR A1493 0.09 SIDE CHAIN REMARK 500 TYR B2493 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-P119 RELATED DB: TARGETDB DBREF 1DFC A 1001 1493 UNP Q16658 FSCN1_HUMAN 1 493 DBREF 1DFC B 2001 2493 UNP Q16658 FSCN1_HUMAN 1 493 SEQRES 1 A 493 MET THR ALA ASN GLY THR ALA GLU ALA VAL GLN ILE GLN SEQRES 2 A 493 PHE GLY LEU ILE ASN CYS GLY ASN LYS TYR LEU THR ALA SEQRES 3 A 493 GLU ALA PHE GLY PHE LYS VAL ASN ALA SER ALA SER SER SEQRES 4 A 493 LEU LYS LYS LYS GLN ILE TRP THR LEU GLU GLN PRO PRO SEQRES 5 A 493 ASP GLU ALA GLY SER ALA ALA VAL CYS LEU ARG SER HIS SEQRES 6 A 493 LEU GLY ARG TYR LEU ALA ALA ASP LYS ASP GLY ASN VAL SEQRES 7 A 493 THR CYS GLU ARG GLU VAL PRO GLY PRO ASP CYS ARG PHE SEQRES 8 A 493 LEU ILE VAL ALA HIS ASP ASP GLY ARG TRP SER LEU GLN SEQRES 9 A 493 SER GLU ALA HIS ARG ARG TYR PHE GLY GLY THR GLU ASP SEQRES 10 A 493 ARG LEU SER CYS PHE ALA GLN THR VAL SER PRO ALA GLU SEQRES 11 A 493 LYS TRP SER VAL HIS ILE ALA MET HIS PRO GLN VAL ASN SEQRES 12 A 493 ILE TYR SER VAL THR ARG LYS ARG TYR ALA HIS LEU SER SEQRES 13 A 493 ALA ARG PRO ALA ASP GLU ILE ALA VAL ASP ARG ASP VAL SEQRES 14 A 493 PRO TRP GLY VAL ASP SER LEU ILE THR LEU ALA PHE GLN SEQRES 15 A 493 ASP GLN ARG TYR SER VAL GLN THR ALA ASP HIS ARG PHE SEQRES 16 A 493 LEU ARG HIS ASP GLY ARG LEU VAL ALA ARG PRO GLU PRO SEQRES 17 A 493 ALA THR GLY TYR THR LEU GLU PHE ARG SER GLY LYS VAL SEQRES 18 A 493 ALA PHE ARG ASP CYS GLU GLY ARG TYR LEU ALA PRO SER SEQRES 19 A 493 GLY PRO SER GLY THR LEU LYS ALA GLY LYS ALA THR LYS SEQRES 20 A 493 VAL GLY LYS ASP GLU LEU PHE ALA LEU GLU GLN SER CYS SEQRES 21 A 493 ALA GLN VAL VAL LEU GLN ALA ALA ASN GLU ARG ASN VAL SEQRES 22 A 493 SER THR ARG GLN GLY MET ASP LEU SER ALA ASN GLN ASP SEQRES 23 A 493 GLU GLU THR ASP GLN GLU THR PHE GLN LEU GLU ILE ASP SEQRES 24 A 493 ARG ASP THR LYS LYS CYS ALA PHE ARG THR HIS THR GLY SEQRES 25 A 493 LYS TYR TRP THR LEU THR ALA THR GLY GLY VAL GLN SER SEQRES 26 A 493 THR ALA SER SER LYS ASN ALA SER CYS TYR PHE ASP ILE SEQRES 27 A 493 GLU TRP ARG ASP ARG ARG ILE THR LEU ARG ALA SER ASN SEQRES 28 A 493 GLY LYS PHE VAL THR SER LYS LYS ASN GLY GLN LEU ALA SEQRES 29 A 493 ALA SER VAL GLU THR ALA GLY ASP SER GLU LEU PHE LEU SEQRES 30 A 493 MET LYS LEU ILE ASN ARG PRO ILE ILE VAL PHE ARG GLY SEQRES 31 A 493 GLU HIS GLY PHE ILE GLY CYS ARG LYS VAL THR GLY THR SEQRES 32 A 493 LEU ASP ALA ASN ARG SER SER TYR ASP VAL PHE GLN LEU SEQRES 33 A 493 GLU PHE ASN ASP GLY ALA TYR ASN ILE LYS ASP SER THR SEQRES 34 A 493 GLY LYS TYR TRP THR VAL GLY SER ASP SER ALA VAL THR SEQRES 35 A 493 SER SER GLY ASP THR PRO VAL ASP PHE PHE PHE GLU PHE SEQRES 36 A 493 CYS ASP TYR ASN LYS VAL ALA ILE LYS VAL GLY GLY ARG SEQRES 37 A 493 TYR LEU LYS GLY ASP HIS ALA GLY VAL LEU LYS ALA SER SEQRES 38 A 493 ALA GLU THR VAL ASP PRO ALA SER LEU TRP GLU TYR SEQRES 1 B 493 MET THR ALA ASN GLY THR ALA GLU ALA VAL GLN ILE GLN SEQRES 2 B 493 PHE GLY LEU ILE ASN CYS GLY ASN LYS TYR LEU THR ALA SEQRES 3 B 493 GLU ALA PHE GLY PHE LYS VAL ASN ALA SER ALA SER SER SEQRES 4 B 493 LEU LYS LYS LYS GLN ILE TRP THR LEU GLU GLN PRO PRO SEQRES 5 B 493 ASP GLU ALA GLY SER ALA ALA VAL CYS LEU ARG SER HIS SEQRES 6 B 493 LEU GLY ARG TYR LEU ALA ALA ASP LYS ASP GLY ASN VAL SEQRES 7 B 493 THR CYS GLU ARG GLU VAL PRO GLY PRO ASP CYS ARG PHE SEQRES 8 B 493 LEU ILE VAL ALA HIS ASP ASP GLY ARG TRP SER LEU GLN SEQRES 9 B 493 SER GLU ALA HIS ARG ARG TYR PHE GLY GLY THR GLU ASP SEQRES 10 B 493 ARG LEU SER CYS PHE ALA GLN THR VAL SER PRO ALA GLU SEQRES 11 B 493 LYS TRP SER VAL HIS ILE ALA MET HIS PRO GLN VAL ASN SEQRES 12 B 493 ILE TYR SER VAL THR ARG LYS ARG TYR ALA HIS LEU SER SEQRES 13 B 493 ALA ARG PRO ALA ASP GLU ILE ALA VAL ASP ARG ASP VAL SEQRES 14 B 493 PRO TRP GLY VAL ASP SER LEU ILE THR LEU ALA PHE GLN SEQRES 15 B 493 ASP GLN ARG TYR SER VAL GLN THR ALA ASP HIS ARG PHE SEQRES 16 B 493 LEU ARG HIS ASP GLY ARG LEU VAL ALA ARG PRO GLU PRO SEQRES 17 B 493 ALA THR GLY TYR THR LEU GLU PHE ARG SER GLY LYS VAL SEQRES 18 B 493 ALA PHE ARG ASP CYS GLU GLY ARG TYR LEU ALA PRO SER SEQRES 19 B 493 GLY PRO SER GLY THR LEU LYS ALA GLY LYS ALA THR LYS SEQRES 20 B 493 VAL GLY LYS ASP GLU LEU PHE ALA LEU GLU GLN SER CYS SEQRES 21 B 493 ALA GLN VAL VAL LEU GLN ALA ALA ASN GLU ARG ASN VAL SEQRES 22 B 493 SER THR ARG GLN GLY MET ASP LEU SER ALA ASN GLN ASP SEQRES 23 B 493 GLU GLU THR ASP GLN GLU THR PHE GLN LEU GLU ILE ASP SEQRES 24 B 493 ARG ASP THR LYS LYS CYS ALA PHE ARG THR HIS THR GLY SEQRES 25 B 493 LYS TYR TRP THR LEU THR ALA THR GLY GLY VAL GLN SER SEQRES 26 B 493 THR ALA SER SER LYS ASN ALA SER CYS TYR PHE ASP ILE SEQRES 27 B 493 GLU TRP ARG ASP ARG ARG ILE THR LEU ARG ALA SER ASN SEQRES 28 B 493 GLY LYS PHE VAL THR SER LYS LYS ASN GLY GLN LEU ALA SEQRES 29 B 493 ALA SER VAL GLU THR ALA GLY ASP SER GLU LEU PHE LEU SEQRES 30 B 493 MET LYS LEU ILE ASN ARG PRO ILE ILE VAL PHE ARG GLY SEQRES 31 B 493 GLU HIS GLY PHE ILE GLY CYS ARG LYS VAL THR GLY THR SEQRES 32 B 493 LEU ASP ALA ASN ARG SER SER TYR ASP VAL PHE GLN LEU SEQRES 33 B 493 GLU PHE ASN ASP GLY ALA TYR ASN ILE LYS ASP SER THR SEQRES 34 B 493 GLY LYS TYR TRP THR VAL GLY SER ASP SER ALA VAL THR SEQRES 35 B 493 SER SER GLY ASP THR PRO VAL ASP PHE PHE PHE GLU PHE SEQRES 36 B 493 CYS ASP TYR ASN LYS VAL ALA ILE LYS VAL GLY GLY ARG SEQRES 37 B 493 TYR LEU LYS GLY ASP HIS ALA GLY VAL LEU LYS ALA SER SEQRES 38 B 493 ALA GLU THR VAL ASP PRO ALA SER LEU TRP GLU TYR HELIX 1 1 GLY A 1086 CYS A 1089 5 4 HELIX 2 2 SER A 1127 LYS A 1131 5 5 HELIX 3 3 GLU A 1207 THR A 1210 5 4 HELIX 4 4 THR A 1289 THR A 1293 5 5 HELIX 5 5 ASN A 1331 TYR A 1335 5 5 HELIX 6 6 HIS A 1474 GLY A 1476 5 3 HELIX 7 7 ASP A 1486 LEU A 1490 5 5 HELIX 8 8 GLY B 2086 CYS B 2089 5 4 HELIX 9 9 GLY B 2172 SER B 2175 5 4 HELIX 10 10 GLU B 2207 THR B 2210 5 4 HELIX 11 11 THR B 2289 THR B 2293 5 5 HELIX 12 12 ASN B 2331 TYR B 2335 5 5 HELIX 13 13 HIS B 2474 GLY B 2476 5 3 HELIX 14 14 ASP B 2486 LEU B 2490 5 5 SHEET 1 A 2 GLN A1013 PHE A1014 0 SHEET 2 A 2 TRP A1046 THR A1047 -1 N TRP A1046 O PHE A1014 SHEET 1 B 2 LEU A1016 ILE A1017 0 SHEET 2 B 2 SER A1133 VAL A1134 -1 O SER A1133 N ILE A1017 SHEET 1 C 2 THR A1025 ALA A1026 0 SHEET 2 C 2 VAL A1033 ASN A1034 -1 O ASN A1034 N THR A1025 SHEET 1 D 2 TYR A1069 ALA A1072 0 SHEET 2 D 2 VAL A1078 ARG A1082 -1 O THR A1079 N ALA A1071 SHEET 1 E 2 PHE A1091 LEU A1092 0 SHEET 2 E 2 GLN A1104 SER A1105 -1 N GLN A1104 O LEU A1092 SHEET 1 F 2 TYR A1111 THR A1115 0 SHEET 2 F 2 ARG A1118 ALA A1123 -1 O ARG A1118 N THR A1115 SHEET 1 G 4 TYR A1186 THR A1190 0 SHEET 2 G 4 ILE A1177 PHE A1181 -1 O THR A1178 N GLN A1189 SHEET 3 G 4 GLN A1141 SER A1146 -1 N VAL A1142 O ILE A1177 SHEET 4 G 4 PHE A1254 GLN A1258 -1 N ALA A1255 O TYR A1145 SHEET 1 H 2 TYR A1152 LEU A1155 0 SHEET 2 H 2 ILE A1163 ARG A1167 -1 O ALA A1164 N HIS A1154 SHEET 1 I 2 PHE A1195 LEU A1196 0 SHEET 2 I 2 LEU A1202 VAL A1203 -1 N VAL A1203 O PHE A1195 SHEET 1 J 2 TYR A1212 PHE A1216 0 SHEET 2 J 2 VAL A1221 ASP A1225 -1 O ALA A1222 N GLU A1215 SHEET 1 K 2 LEU A1231 PRO A1233 0 SHEET 2 K 2 LEU A1240 ALA A1242 -1 O LYS A1241 N ALA A1232 SHEET 1 L 8 VAL A1323 ALA A1327 0 SHEET 2 L 8 LYS A1313 LEU A1317 -1 N TYR A1314 O ALA A1327 SHEET 3 L 8 CYS A1305 THR A1309 -1 O PHE A1307 N TRP A1315 SHEET 4 L 8 PHE A1294 ILE A1298 -1 N GLN A1295 O ARG A1308 SHEET 5 L 8 GLN A1262 GLN A1266 -1 N VAL A1263 O PHE A1294 SHEET 6 L 8 LEU A1375 LEU A1380 -1 N LEU A1377 O GLN A1266 SHEET 7 L 8 ARG A1344 ARG A1348 -1 N ILE A1345 O PHE A1376 SHEET 8 L 8 ASP A1337 ARG A1341 -1 O ASP A1337 N ARG A1348 SHEET 1 M 2 ASN A1272 SER A1274 0 SHEET 2 M 2 SER A1282 GLN A1285 -1 N SER A1282 O SER A1274 SHEET 1 N 2 THR A1356 SER A1357 0 SHEET 2 N 2 LEU A1363 ALA A1364 -1 N ALA A1364 O THR A1356 SHEET 1 O 3 ARG A1389 GLY A1390 0 SHEET 2 O 3 GLY A1393 CYS A1397 -1 N GLY A1393 O GLY A1390 SHEET 3 O 3 LEU A1404 ARG A1408 -1 N ASP A1405 O GLY A1396 SHEET 1 P 2 GLN A1415 ASN A1419 0 SHEET 2 P 2 ALA A1422 LYS A1426 -1 O ALA A1422 N ASN A1419 SHEET 1 Q 2 THR A1434 VAL A1435 0 SHEET 2 Q 2 VAL A1441 THR A1442 -1 N THR A1442 O THR A1434 SHEET 1 R 4 PHE A1452 ASP A1457 0 SHEET 2 R 4 LYS A1460 VAL A1465 -1 O LYS A1460 N ASP A1457 SHEET 3 R 4 ARG A1468 GLY A1472 -1 O ARG A1468 N VAL A1465 SHEET 4 R 4 LEU A1478 ALA A1482 -1 N LYS A1479 O LYS A1471 SHEET 1 S 2 GLN B2013 PHE B2014 0 SHEET 2 S 2 TRP B2046 THR B2047 -1 N TRP B2046 O PHE B2014 SHEET 1 T 2 LEU B2016 ILE B2017 0 SHEET 2 T 2 SER B2133 VAL B2134 -1 N SER B2133 O ILE B2017 SHEET 1 U 2 THR B2025 ALA B2026 0 SHEET 2 U 2 VAL B2033 ASN B2034 -1 O ASN B2034 N THR B2025 SHEET 1 V 2 TYR B2069 ALA B2072 0 SHEET 2 V 2 VAL B2078 ARG B2082 -1 O THR B2079 N ALA B2071 SHEET 1 W 2 PHE B2091 LEU B2092 0 SHEET 2 W 2 GLN B2104 SER B2105 -1 N GLN B2104 O LEU B2092 SHEET 1 X 2 TYR B2111 GLY B2114 0 SHEET 2 X 2 LEU B2119 ALA B2123 -1 N SER B2120 O GLY B2113 SHEET 1 Y 7 GLN B2141 SER B2146 0 SHEET 2 Y 7 ILE B2177 PHE B2181 -1 O ILE B2177 N VAL B2142 SHEET 3 Y 7 TYR B2186 THR B2190 -1 N SER B2187 O ALA B2180 SHEET 4 Y 7 TYR B2212 PHE B2216 -1 O TYR B2212 N TYR B2186 SHEET 5 Y 7 VAL B2221 ASP B2225 -1 O ALA B2222 N GLU B2215 SHEET 6 Y 7 LEU B2253 GLN B2258 -1 N PHE B2254 O VAL B2221 SHEET 7 Y 7 GLN B2141 SER B2146 -1 N ASN B2143 O GLU B2257 SHEET 1 Z 2 TYR B2152 LEU B2155 0 SHEET 2 Z 2 ILE B2163 ARG B2167 -1 N ALA B2164 O HIS B2154 SHEET 1 AA 2 PHE B2195 LEU B2196 0 SHEET 2 AA 2 LEU B2202 VAL B2203 -1 N VAL B2203 O PHE B2195 SHEET 1 AB 2 LEU B2231 PRO B2233 0 SHEET 2 AB 2 LEU B2240 ALA B2242 -1 O LYS B2241 N ALA B2232 SHEET 1 AC 8 VAL B2323 ALA B2327 0 SHEET 2 AC 8 LYS B2313 LEU B2317 -1 N TYR B2314 O ALA B2327 SHEET 3 AC 8 CYS B2305 THR B2309 -1 O PHE B2307 N TRP B2315 SHEET 4 AC 8 PHE B2294 ILE B2298 -1 N GLN B2295 O ARG B2308 SHEET 5 AC 8 GLN B2262 GLN B2266 -1 N VAL B2263 O PHE B2294 SHEET 6 AC 8 LEU B2375 LEU B2380 -1 O LEU B2377 N GLN B2266 SHEET 7 AC 8 ARG B2344 ARG B2348 -1 N ILE B2345 O PHE B2376 SHEET 8 AC 8 ASP B2337 ARG B2341 -1 O ASP B2337 N ARG B2348 SHEET 1 AD 2 ASN B2272 SER B2274 0 SHEET 2 AD 2 SER B2282 GLN B2285 -1 N SER B2282 O SER B2274 SHEET 1 AE 2 VAL B2355 SER B2357 0 SHEET 2 AE 2 LEU B2363 ALA B2365 -1 N ALA B2364 O THR B2356 SHEET 1 AF 3 ILE B2385 ILE B2386 0 SHEET 2 AF 3 PHE B2414 ASN B2419 -1 O PHE B2414 N ILE B2386 SHEET 3 AF 3 ALA B2422 LYS B2426 -1 O ALA B2422 N ASN B2419 SHEET 1 AG 3 ARG B2389 GLY B2390 0 SHEET 2 AG 3 GLY B2393 CYS B2397 -1 N GLY B2393 O GLY B2390 SHEET 3 AG 3 LEU B2404 ARG B2408 -1 N ASP B2405 O GLY B2396 SHEET 1 AH 2 THR B2434 VAL B2435 0 SHEET 2 AH 2 VAL B2441 THR B2442 -1 O THR B2442 N THR B2434 SHEET 1 AI 4 PHE B2452 ASP B2457 0 SHEET 2 AI 4 LYS B2460 VAL B2465 -1 O LYS B2460 N ASP B2457 SHEET 3 AI 4 ARG B2468 GLY B2472 -1 O ARG B2468 N VAL B2465 SHEET 4 AI 4 LEU B2478 ALA B2482 -1 N LYS B2479 O LYS B2471 CRYST1 165.426 71.689 116.924 90.00 132.17 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006045 0.000000 0.005475 0.00000 SCALE2 0.000000 0.013949 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011539 0.00000