data_1DFT # _entry.id 1DFT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DFT pdb_00001dft 10.2210/pdb1dft/pdb RCSB RCSB010046 ? ? WWPDB D_1000010046 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1DFS _pdbx_database_related.details '1DFS CONTAINS THE ALPHA-DOMAIN OF MOUSE METALLOTHIONEIN-1' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DFT _pdbx_database_status.recvd_initial_deposition_date 1999-11-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zangger, K.' 1 'Oz, G.' 2 'Otvos, J.D.' 3 'Armitage, I.M.' 4 # _citation.id primary _citation.title 'Three-dimensional solution structure of mouse [Cd7]-metallothionein-1 by homonuclear and heteronuclear NMR spectroscopy.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 8 _citation.page_first 2630 _citation.page_last 2638 _citation.year 1999 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10631978 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zangger, K.' 1 ? primary 'Oz, G.' 2 ? primary 'Otvos, J.D.' 3 ? primary 'Armitage, I.M.' 4 ? # _cell.entry_id 1DFT _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DFT _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man METALLOTHIONEIN-1 3017.507 1 ? ? 'N-TERMINAL DOMAIN (BETA)' ? 2 non-polymer syn 'CADMIUM ION' 112.411 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MDPNCSCSTGGSCTCTSSCACKNCKCTSCK _entity_poly.pdbx_seq_one_letter_code_can MDPNCSCSTGGSCTCTSSCACKNCKCTSCK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 PRO n 1 4 ASN n 1 5 CYS n 1 6 SER n 1 7 CYS n 1 8 SER n 1 9 THR n 1 10 GLY n 1 11 GLY n 1 12 SER n 1 13 CYS n 1 14 THR n 1 15 CYS n 1 16 THR n 1 17 SER n 1 18 SER n 1 19 CYS n 1 20 ALA n 1 21 CYS n 1 22 LYS n 1 23 ASN n 1 24 CYS n 1 25 LYS n 1 26 CYS n 1 27 THR n 1 28 SER n 1 29 CYS n 1 30 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET3D _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MT1_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02802 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DFT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 30 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02802 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 30 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D NOESY' 1 2 1 '2D TOCSY' 1 3 2 'ACCORDION CD-H HSQC' 1 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 283 AMBIENT 6.5 15mMKPI ? K 2 298 AMBIENT 6.5 15mMKPI ? K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.7MM MOUSE METALLOTHIONEIN-1, NATURAL ABUNDANCE, 15MM PHOSPHATE BUFFER NA' _pdbx_nmr_sample_details.solvent_system ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 'UNITY INOVA' Varian 800 ? 2 'UNITY INOVA' Varian 600 ? # _pdbx_nmr_refine.entry_id 1DFT _pdbx_nmr_refine.method 'HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING' _pdbx_nmr_refine.details 'A TOTAL OF 103 NOE-DERIVED DISTANCE CONSTRAINTS AND 12 CD-S CONNECTIVITIES' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1DFT _pdbx_nmr_details.text 'THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES AND AN ACCORDION CD-H HSQC' # _pdbx_nmr_ensemble.entry_id 1DFT _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria 'MINIMIZED AVERAGE STRUCTURE' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1DFT _pdbx_nmr_representative.conformer_id ? _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal 'data analysis' VNMR 6.1A VARIAN 1 'structure solution' X-PLOR 3.851 BRUNGER 2 refinement X-PLOR 3.851 BRUNGER 3 # _exptl.entry_id 1DFT _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1DFT _struct.title 'SOLUTION STRUCTURE OF THE BETA-DOMAIN OF MOUSE METALLOTHIONEIN-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 1DFT _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'HALF TURN, CD-S CLUSTER, METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 5 SG ? ? ? 1_555 C CD . CD ? ? A CYS 5 A CD 32 1_555 ? ? ? ? ? ? ? 2.566 ? ? metalc2 metalc ? ? A CYS 7 SG ? ? ? 1_555 C CD . CD ? ? A CYS 7 A CD 32 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc3 metalc ? ? A CYS 7 SG ? ? ? 1_555 D CD . CD ? ? A CYS 7 A CD 33 1_555 ? ? ? ? ? ? ? 2.551 ? ? metalc4 metalc ? ? A CYS 13 SG ? ? ? 1_555 D CD . CD ? ? A CYS 13 A CD 33 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc5 metalc ? ? A CYS 15 SG ? ? ? 1_555 B CD . CD ? ? A CYS 15 A CD 31 1_555 ? ? ? ? ? ? ? 2.564 ? ? metalc6 metalc ? ? A CYS 15 SG ? ? ? 1_555 D CD . CD ? ? A CYS 15 A CD 33 1_555 ? ? ? ? ? ? ? 2.550 ? ? metalc7 metalc ? ? A CYS 19 SG ? ? ? 1_555 B CD . CD ? ? A CYS 19 A CD 31 1_555 ? ? ? ? ? ? ? 2.540 ? ? metalc8 metalc ? ? A CYS 21 SG ? ? ? 1_555 C CD . CD ? ? A CYS 21 A CD 32 1_555 ? ? ? ? ? ? ? 2.577 ? ? metalc9 metalc ? ? A CYS 24 SG ? ? ? 1_555 B CD . CD ? ? A CYS 24 A CD 31 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc10 metalc ? ? A CYS 24 SG ? ? ? 1_555 C CD . CD ? ? A CYS 24 A CD 32 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc11 metalc ? ? A CYS 26 SG ? ? ? 1_555 D CD . CD ? ? A CYS 26 A CD 33 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc12 metalc ? ? A CYS 29 SG ? ? ? 1_555 B CD . CD ? ? A CYS 29 A CD 31 1_555 ? ? ? ? ? ? ? 2.555 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CD 31 ? 4 'BINDING SITE FOR RESIDUE CD A 31' AC2 Software A CD 32 ? 4 'BINDING SITE FOR RESIDUE CD A 32' AC3 Software A CD 33 ? 4 'BINDING SITE FOR RESIDUE CD A 33' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 15 ? CYS A 15 . ? 1_555 ? 2 AC1 4 CYS A 19 ? CYS A 19 . ? 1_555 ? 3 AC1 4 CYS A 24 ? CYS A 24 . ? 1_555 ? 4 AC1 4 CYS A 29 ? CYS A 29 . ? 1_555 ? 5 AC2 4 CYS A 5 ? CYS A 5 . ? 1_555 ? 6 AC2 4 CYS A 7 ? CYS A 7 . ? 1_555 ? 7 AC2 4 CYS A 21 ? CYS A 21 . ? 1_555 ? 8 AC2 4 CYS A 24 ? CYS A 24 . ? 1_555 ? 9 AC3 4 CYS A 7 ? CYS A 7 . ? 1_555 ? 10 AC3 4 CYS A 13 ? CYS A 13 . ? 1_555 ? 11 AC3 4 CYS A 15 ? CYS A 15 . ? 1_555 ? 12 AC3 4 CYS A 26 ? CYS A 26 . ? 1_555 ? # _database_PDB_matrix.entry_id 1DFT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DFT _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 CYS 13 13 13 CYS CYS A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 CYS 15 15 15 CYS CYS A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 LYS 30 30 30 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD 1 31 31 CD KDS A . C 2 CD 1 32 31 CD KDS A . D 2 CD 1 33 31 CD KDS A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 5 ? A CYS 5 ? 1_555 CD ? C CD . ? A CD 32 ? 1_555 SG ? A CYS 7 ? A CYS 7 ? 1_555 104.4 ? 2 SG ? A CYS 5 ? A CYS 5 ? 1_555 CD ? C CD . ? A CD 32 ? 1_555 SG ? A CYS 21 ? A CYS 21 ? 1_555 123.6 ? 3 SG ? A CYS 7 ? A CYS 7 ? 1_555 CD ? C CD . ? A CD 32 ? 1_555 SG ? A CYS 21 ? A CYS 21 ? 1_555 106.5 ? 4 SG ? A CYS 5 ? A CYS 5 ? 1_555 CD ? C CD . ? A CD 32 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 101.1 ? 5 SG ? A CYS 7 ? A CYS 7 ? 1_555 CD ? C CD . ? A CD 32 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 123.3 ? 6 SG ? A CYS 21 ? A CYS 21 ? 1_555 CD ? C CD . ? A CD 32 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 99.6 ? 7 SG ? A CYS 7 ? A CYS 7 ? 1_555 CD ? D CD . ? A CD 33 ? 1_555 SG ? A CYS 13 ? A CYS 13 ? 1_555 107.5 ? 8 SG ? A CYS 7 ? A CYS 7 ? 1_555 CD ? D CD . ? A CD 33 ? 1_555 SG ? A CYS 15 ? A CYS 15 ? 1_555 110.4 ? 9 SG ? A CYS 13 ? A CYS 13 ? 1_555 CD ? D CD . ? A CD 33 ? 1_555 SG ? A CYS 15 ? A CYS 15 ? 1_555 121.2 ? 10 SG ? A CYS 7 ? A CYS 7 ? 1_555 CD ? D CD . ? A CD 33 ? 1_555 SG ? A CYS 26 ? A CYS 26 ? 1_555 120.2 ? 11 SG ? A CYS 13 ? A CYS 13 ? 1_555 CD ? D CD . ? A CD 33 ? 1_555 SG ? A CYS 26 ? A CYS 26 ? 1_555 89.2 ? 12 SG ? A CYS 15 ? A CYS 15 ? 1_555 CD ? D CD . ? A CD 33 ? 1_555 SG ? A CYS 26 ? A CYS 26 ? 1_555 107.8 ? 13 SG ? A CYS 15 ? A CYS 15 ? 1_555 CD ? B CD . ? A CD 31 ? 1_555 SG ? A CYS 19 ? A CYS 19 ? 1_555 108.6 ? 14 SG ? A CYS 15 ? A CYS 15 ? 1_555 CD ? B CD . ? A CD 31 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 120.2 ? 15 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? B CD . ? A CD 31 ? 1_555 SG ? A CYS 24 ? A CYS 24 ? 1_555 95.5 ? 16 SG ? A CYS 15 ? A CYS 15 ? 1_555 CD ? B CD . ? A CD 31 ? 1_555 SG ? A CYS 29 ? A CYS 29 ? 1_555 112.8 ? 17 SG ? A CYS 19 ? A CYS 19 ? 1_555 CD ? B CD . ? A CD 31 ? 1_555 SG ? A CYS 29 ? A CYS 29 ? 1_555 111.8 ? 18 SG ? A CYS 24 ? A CYS 24 ? 1_555 CD ? B CD . ? A CD 31 ? 1_555 SG ? A CYS 29 ? A CYS 29 ? 1_555 106.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-12-01 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_assembly 3 4 'Structure model' pdbx_struct_conn_angle 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.value' 10 4 'Structure model' '_struct_conn.pdbx_dist_value' 11 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 23 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N A MET 1 ? ? CA A MET 1 ? ? 1.614 1.459 0.155 0.020 N 2 1 CA A MET 1 ? ? CB A MET 1 ? ? 1.715 1.535 0.180 0.022 N 3 1 N A ASP 2 ? ? CA A ASP 2 ? ? 1.620 1.459 0.161 0.020 N 4 1 CA A ASP 2 ? ? C A ASP 2 ? ? 1.691 1.525 0.166 0.026 N 5 1 C A ASP 2 ? ? N A PRO 3 ? ? 1.504 1.338 0.166 0.019 Y 6 1 N A PRO 3 ? ? CA A PRO 3 ? ? 1.605 1.468 0.137 0.017 N 7 1 CA A PRO 3 ? ? C A PRO 3 ? ? 1.680 1.524 0.156 0.020 N 8 1 N A ASN 4 ? ? CA A ASN 4 ? ? 1.610 1.459 0.151 0.020 N 9 1 C A ASN 4 ? ? N A CYS 5 ? ? 1.484 1.336 0.148 0.023 Y 10 1 N A CYS 5 ? ? CA A CYS 5 ? ? 1.628 1.459 0.169 0.020 N 11 1 CA A CYS 5 ? ? CB A CYS 5 ? ? 1.674 1.535 0.139 0.022 N 12 1 N A SER 6 ? ? CA A SER 6 ? ? 1.619 1.459 0.160 0.020 N 13 1 CA A SER 6 ? ? CB A SER 6 ? ? 1.634 1.525 0.109 0.015 N 14 1 CA A SER 6 ? ? C A SER 6 ? ? 1.696 1.525 0.171 0.026 N 15 1 N A CYS 7 ? ? CA A CYS 7 ? ? 1.658 1.459 0.199 0.020 N 16 1 CA A CYS 7 ? ? CB A CYS 7 ? ? 1.691 1.535 0.156 0.022 N 17 1 CA A CYS 7 ? ? C A CYS 7 ? ? 1.688 1.525 0.163 0.026 N 18 1 N A SER 8 ? ? CA A SER 8 ? ? 1.660 1.459 0.201 0.020 N 19 1 CA A SER 8 ? ? CB A SER 8 ? ? 1.649 1.525 0.124 0.015 N 20 1 CA A SER 8 ? ? C A SER 8 ? ? 1.683 1.525 0.158 0.026 N 21 1 C A SER 8 ? ? N A THR 9 ? ? 1.488 1.336 0.152 0.023 Y 22 1 N A THR 9 ? ? CA A THR 9 ? ? 1.656 1.459 0.197 0.020 N 23 1 CA A THR 9 ? ? CB A THR 9 ? ? 1.711 1.529 0.182 0.026 N 24 1 N A GLY 10 ? ? CA A GLY 10 ? ? 1.605 1.456 0.149 0.015 N 25 1 CA A GLY 10 ? ? C A GLY 10 ? ? 1.637 1.514 0.123 0.016 N 26 1 N A GLY 11 ? ? CA A GLY 11 ? ? 1.581 1.456 0.125 0.015 N 27 1 CA A GLY 11 ? ? C A GLY 11 ? ? 1.612 1.514 0.098 0.016 N 28 1 N A SER 12 ? ? CA A SER 12 ? ? 1.634 1.459 0.175 0.020 N 29 1 CA A SER 12 ? ? CB A SER 12 ? ? 1.646 1.525 0.121 0.015 N 30 1 N A CYS 13 ? ? CA A CYS 13 ? ? 1.640 1.459 0.181 0.020 N 31 1 CA A CYS 13 ? ? C A CYS 13 ? ? 1.685 1.525 0.160 0.026 N 32 1 N A THR 14 ? ? CA A THR 14 ? ? 1.619 1.459 0.160 0.020 N 33 1 CA A THR 14 ? ? CB A THR 14 ? ? 1.732 1.529 0.203 0.026 N 34 1 C A THR 14 ? ? N A CYS 15 ? ? 1.484 1.336 0.148 0.023 Y 35 1 N A CYS 15 ? ? CA A CYS 15 ? ? 1.663 1.459 0.204 0.020 N 36 1 CA A CYS 15 ? ? CB A CYS 15 ? ? 1.697 1.535 0.162 0.022 N 37 1 CA A CYS 15 ? ? C A CYS 15 ? ? 1.692 1.525 0.167 0.026 N 38 1 N A THR 16 ? ? CA A THR 16 ? ? 1.644 1.459 0.185 0.020 N 39 1 CA A THR 16 ? ? CB A THR 16 ? ? 1.705 1.529 0.176 0.026 N 40 1 N A SER 17 ? ? CA A SER 17 ? ? 1.640 1.459 0.181 0.020 N 41 1 CA A SER 17 ? ? CB A SER 17 ? ? 1.645 1.525 0.120 0.015 N 42 1 N A SER 18 ? ? CA A SER 18 ? ? 1.621 1.459 0.162 0.020 N 43 1 CA A SER 18 ? ? CB A SER 18 ? ? 1.636 1.525 0.111 0.015 N 44 1 N A CYS 19 ? ? CA A CYS 19 ? ? 1.634 1.459 0.175 0.020 N 45 1 CA A CYS 19 ? ? CB A CYS 19 ? ? 1.685 1.535 0.150 0.022 N 46 1 N A ALA 20 ? ? CA A ALA 20 ? ? 1.625 1.459 0.166 0.020 N 47 1 N A CYS 21 ? ? CA A CYS 21 ? ? 1.624 1.459 0.165 0.020 N 48 1 CA A CYS 21 ? ? C A CYS 21 ? ? 1.707 1.525 0.182 0.026 N 49 1 N A LYS 22 ? ? CA A LYS 22 ? ? 1.608 1.459 0.149 0.020 N 50 1 CA A LYS 22 ? ? C A LYS 22 ? ? 1.686 1.525 0.161 0.026 N 51 1 N A ASN 23 ? ? CA A ASN 23 ? ? 1.615 1.459 0.156 0.020 N 52 1 CA A ASN 23 ? ? C A ASN 23 ? ? 1.687 1.525 0.162 0.026 N 53 1 N A CYS 24 ? ? CA A CYS 24 ? ? 1.658 1.459 0.199 0.020 N 54 1 CA A CYS 24 ? ? CB A CYS 24 ? ? 1.698 1.535 0.163 0.022 N 55 1 N A LYS 25 ? ? CA A LYS 25 ? ? 1.625 1.459 0.166 0.020 N 56 1 CA A LYS 25 ? ? CB A LYS 25 ? ? 1.686 1.535 0.151 0.022 N 57 1 CA A LYS 25 ? ? C A LYS 25 ? ? 1.690 1.525 0.165 0.026 N 58 1 N A CYS 26 ? ? CA A CYS 26 ? ? 1.638 1.459 0.179 0.020 N 59 1 CA A CYS 26 ? ? CB A CYS 26 ? ? 1.683 1.535 0.148 0.022 N 60 1 C A CYS 26 ? ? N A THR 27 ? ? 1.479 1.336 0.143 0.023 Y 61 1 N A THR 27 ? ? CA A THR 27 ? ? 1.642 1.459 0.183 0.020 N 62 1 CA A THR 27 ? ? CB A THR 27 ? ? 1.701 1.529 0.172 0.026 N 63 1 N A SER 28 ? ? CA A SER 28 ? ? 1.647 1.459 0.188 0.020 N 64 1 CA A SER 28 ? ? CB A SER 28 ? ? 1.644 1.525 0.119 0.015 N 65 1 N A CYS 29 ? ? CA A CYS 29 ? ? 1.631 1.459 0.172 0.020 N 66 1 CA A CYS 29 ? ? CB A CYS 29 ? ? 1.686 1.535 0.151 0.022 N 67 1 N A LYS 30 ? ? CA A LYS 30 ? ? 1.649 1.459 0.190 0.020 N 68 1 CA A LYS 30 ? ? CB A LYS 30 ? ? 1.677 1.535 0.142 0.022 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 5 ? ? CB A CYS 5 ? ? SG A CYS 5 ? ? 124.12 114.20 9.92 1.10 N 2 1 CA A CYS 21 ? ? CB A CYS 21 ? ? SG A CYS 21 ? ? 121.61 114.20 7.41 1.10 N 3 1 CA A CYS 24 ? ? CB A CYS 24 ? ? SG A CYS 24 ? ? 122.25 114.20 8.05 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 8 ? ? 113.65 -137.80 2 1 THR A 9 ? ? -150.44 -42.41 3 1 THR A 14 ? ? 86.76 -92.43 4 1 CYS A 15 ? ? 59.75 70.99 5 1 THR A 16 ? ? -104.36 -112.18 6 1 CYS A 21 ? ? -123.09 -126.29 7 1 LYS A 22 ? ? -132.86 -62.44 8 1 ASN A 23 ? ? -133.68 -61.84 9 1 CYS A 24 ? ? 83.42 151.12 10 1 LYS A 25 ? ? -105.86 66.71 11 1 CYS A 26 ? ? -116.27 -120.45 12 1 THR A 27 ? ? -103.04 -82.39 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'CADMIUM ION' _pdbx_entity_nonpoly.comp_id CD #