data_1DIC # _entry.id 1DIC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DIC pdb_00001dic 10.2210/pdb1dic/pdb WWPDB D_1000172794 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-07-22 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 5 'Structure model' 1 4 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_initial_refinement_model 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DIC _pdbx_database_status.recvd_initial_deposition_date 1998-07-08 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cole, L.B.' 1 'Kilpatrick, J.M.' 2 'Chu, N.' 3 'Babu, Y.S.' 4 # _citation.id primary _citation.title 'Structure of 3,4-dichloroisocoumarin-inhibited factor D.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 54 _citation.page_first 711 _citation.page_last 717 _citation.year 1998 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9757085 _citation.pdbx_database_id_DOI 10.1107/S0907444997010457 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cole, L.B.' 1 ? primary 'Kilpatrick, J.M.' 2 ? primary 'Chu, N.' 3 ? primary 'Babu, Y.S.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'FACTOR D' 24438.807 1 3.4.21.46 ? ? '3,4-DICHLOROISOCOUMARIN GROUP LINKED TO SERINE 195' 2 non-polymer syn 3,4-DICHLOROISOCOUMARIN 215.033 1 ? ? ? ? 3 non-polymer syn 'OXYGEN ATOM' 15.999 2 ? ? ? ? 4 water nat water 18.015 115 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPD SQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHH DGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA ; _entity_poly.pdbx_seq_one_letter_code_can ;ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPD SQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHH DGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 3,4-DICHLOROISOCOUMARIN DIC 3 'OXYGEN ATOM' O 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 LEU n 1 3 GLY n 1 4 GLY n 1 5 ARG n 1 6 GLU n 1 7 ALA n 1 8 GLU n 1 9 ALA n 1 10 HIS n 1 11 ALA n 1 12 ARG n 1 13 PRO n 1 14 TYR n 1 15 MET n 1 16 ALA n 1 17 SER n 1 18 VAL n 1 19 GLN n 1 20 LEU n 1 21 ASN n 1 22 GLY n 1 23 ALA n 1 24 HIS n 1 25 LEU n 1 26 CYS n 1 27 GLY n 1 28 GLY n 1 29 VAL n 1 30 LEU n 1 31 VAL n 1 32 ALA n 1 33 GLU n 1 34 GLN n 1 35 TRP n 1 36 VAL n 1 37 LEU n 1 38 SER n 1 39 ALA n 1 40 ALA n 1 41 HIS n 1 42 CYS n 1 43 LEU n 1 44 GLU n 1 45 ASP n 1 46 ALA n 1 47 ALA n 1 48 ASP n 1 49 GLY n 1 50 LYS n 1 51 VAL n 1 52 GLN n 1 53 VAL n 1 54 LEU n 1 55 LEU n 1 56 GLY n 1 57 ALA n 1 58 HIS n 1 59 SER n 1 60 LEU n 1 61 SER n 1 62 GLN n 1 63 PRO n 1 64 GLU n 1 65 PRO n 1 66 SER n 1 67 LYS n 1 68 ARG n 1 69 LEU n 1 70 TYR n 1 71 ASP n 1 72 VAL n 1 73 LEU n 1 74 ARG n 1 75 ALA n 1 76 VAL n 1 77 PRO n 1 78 HIS n 1 79 PRO n 1 80 ASP n 1 81 SER n 1 82 GLN n 1 83 PRO n 1 84 ASP n 1 85 THR n 1 86 ILE n 1 87 ASP n 1 88 HIS n 1 89 ASP n 1 90 LEU n 1 91 LEU n 1 92 LEU n 1 93 LEU n 1 94 GLN n 1 95 LEU n 1 96 SER n 1 97 GLU n 1 98 LYS n 1 99 ALA n 1 100 THR n 1 101 LEU n 1 102 GLY n 1 103 PRO n 1 104 ALA n 1 105 VAL n 1 106 ARG n 1 107 PRO n 1 108 LEU n 1 109 PRO n 1 110 TRP n 1 111 GLN n 1 112 ARG n 1 113 VAL n 1 114 ASP n 1 115 ARG n 1 116 ASP n 1 117 VAL n 1 118 ALA n 1 119 PRO n 1 120 GLY n 1 121 THR n 1 122 LEU n 1 123 CYS n 1 124 ASP n 1 125 VAL n 1 126 ALA n 1 127 GLY n 1 128 TRP n 1 129 GLY n 1 130 ILE n 1 131 VAL n 1 132 ASN n 1 133 HIS n 1 134 ALA n 1 135 GLY n 1 136 ARG n 1 137 ARG n 1 138 PRO n 1 139 ASP n 1 140 SER n 1 141 LEU n 1 142 GLN n 1 143 HIS n 1 144 VAL n 1 145 LEU n 1 146 LEU n 1 147 PRO n 1 148 VAL n 1 149 LEU n 1 150 ASP n 1 151 ARG n 1 152 ALA n 1 153 THR n 1 154 CYS n 1 155 ASN n 1 156 ARG n 1 157 ARG n 1 158 THR n 1 159 HIS n 1 160 HIS n 1 161 ASP n 1 162 GLY n 1 163 ALA n 1 164 ILE n 1 165 THR n 1 166 GLU n 1 167 ARG n 1 168 LEU n 1 169 MET n 1 170 CYS n 1 171 ALA n 1 172 GLU n 1 173 SER n 1 174 ASN n 1 175 ARG n 1 176 ARG n 1 177 ASP n 1 178 SER n 1 179 CYS n 1 180 LYS n 1 181 GLY n 1 182 ASP n 1 183 SER n 1 184 GLY n 1 185 GLY n 1 186 PRO n 1 187 LEU n 1 188 VAL n 1 189 CYS n 1 190 GLY n 1 191 GLY n 1 192 VAL n 1 193 LEU n 1 194 GLU n 1 195 GLY n 1 196 VAL n 1 197 VAL n 1 198 THR n 1 199 SER n 1 200 GLY n 1 201 SER n 1 202 ARG n 1 203 VAL n 1 204 CYS n 1 205 GLY n 1 206 ASN n 1 207 ARG n 1 208 LYS n 1 209 LYS n 1 210 PRO n 1 211 GLY n 1 212 ILE n 1 213 TYR n 1 214 THR n 1 215 ARG n 1 216 VAL n 1 217 ALA n 1 218 SER n 1 219 TYR n 1 220 ALA n 1 221 ALA n 1 222 TRP n 1 223 ILE n 1 224 ASP n 1 225 SER n 1 226 VAL n 1 227 LEU n 1 228 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus Homo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'ISOLATED FROM A PATIENT WITH FANCONI SYNDROME' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DIC non-polymer . 3,4-DICHLOROISOCOUMARIN ? 'C9 H4 Cl2 O2' 215.033 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 O non-polymer . 'OXYGEN ATOM' ? O 15.999 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 LEU 2 17 17 LEU LEU A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 ARG 5 20 20 ARG ARG A . n A 1 6 GLU 6 21 21 GLU GLU A . n A 1 7 ALA 7 22 22 ALA ALA A . n A 1 8 GLU 8 23 23 GLU GLU A . n A 1 9 ALA 9 24 24 ALA ALA A . n A 1 10 HIS 10 25 25 HIS HIS A . n A 1 11 ALA 11 26 26 ALA ALA A . n A 1 12 ARG 12 27 27 ARG ARG A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 TYR 14 29 29 TYR TYR A . n A 1 15 MET 15 30 30 MET MET A . n A 1 16 ALA 16 31 31 ALA ALA A . n A 1 17 SER 17 32 32 SER SER A . n A 1 18 VAL 18 33 33 VAL VAL A . n A 1 19 GLN 19 34 34 GLN GLN A . n A 1 20 LEU 20 35 35 LEU LEU A . n A 1 21 ASN 21 36 36 ASN ASN A . n A 1 22 GLY 22 38 38 GLY GLY A . n A 1 23 ALA 23 39 39 ALA ALA A . n A 1 24 HIS 24 40 40 HIS HIS A . n A 1 25 LEU 25 41 41 LEU LEU A . n A 1 26 CYS 26 42 42 CYS CYS A . n A 1 27 GLY 27 43 43 GLY GLY A . n A 1 28 GLY 28 44 44 GLY GLY A . n A 1 29 VAL 29 45 45 VAL VAL A . n A 1 30 LEU 30 46 46 LEU LEU A . n A 1 31 VAL 31 47 47 VAL VAL A . n A 1 32 ALA 32 48 48 ALA ALA A . n A 1 33 GLU 33 49 49 GLU GLU A . n A 1 34 GLN 34 50 50 GLN GLN A . n A 1 35 TRP 35 51 51 TRP TRP A . n A 1 36 VAL 36 52 52 VAL VAL A . n A 1 37 LEU 37 53 53 LEU LEU A . n A 1 38 SER 38 54 54 SER SER A . n A 1 39 ALA 39 55 55 ALA ALA A . n A 1 40 ALA 40 56 56 ALA ALA A . n A 1 41 HIS 41 57 57 HIS HIS A . n A 1 42 CYS 42 58 58 CYS CYS A . n A 1 43 LEU 43 59 59 LEU LEU A . n A 1 44 GLU 44 60 60 GLU GLU A . n A 1 45 ASP 45 61 61 ASP ASP A . n A 1 46 ALA 46 61 61 ALA ALA A A n A 1 47 ALA 47 61 61 ALA ALA A B n A 1 48 ASP 48 61 61 ASP ASP A C n A 1 49 GLY 49 62 62 GLY GLY A . n A 1 50 LYS 50 63 63 LYS LYS A . n A 1 51 VAL 51 64 64 VAL VAL A . n A 1 52 GLN 52 65 65 GLN GLN A . n A 1 53 VAL 53 66 66 VAL VAL A . n A 1 54 LEU 54 67 67 LEU LEU A . n A 1 55 LEU 55 68 68 LEU LEU A . n A 1 56 GLY 56 69 69 GLY GLY A . n A 1 57 ALA 57 70 70 ALA ALA A . n A 1 58 HIS 58 71 71 HIS HIS A . n A 1 59 SER 59 72 72 SER SER A . n A 1 60 LEU 60 73 73 LEU LEU A . n A 1 61 SER 61 74 74 SER SER A . n A 1 62 GLN 62 75 75 GLN GLN A . n A 1 63 PRO 63 76 76 PRO PRO A . n A 1 64 GLU 64 77 77 GLU GLU A . n A 1 65 PRO 65 78 78 PRO PRO A . n A 1 66 SER 66 79 79 SER SER A . n A 1 67 LYS 67 80 80 LYS LYS A . n A 1 68 ARG 68 81 81 ARG ARG A . n A 1 69 LEU 69 82 82 LEU LEU A . n A 1 70 TYR 70 83 83 TYR TYR A . n A 1 71 ASP 71 84 84 ASP ASP A . n A 1 72 VAL 72 85 85 VAL VAL A . n A 1 73 LEU 73 86 86 LEU LEU A . n A 1 74 ARG 74 87 87 ARG ARG A . n A 1 75 ALA 75 88 88 ALA ALA A . n A 1 76 VAL 76 89 89 VAL VAL A . n A 1 77 PRO 77 90 90 PRO PRO A . n A 1 78 HIS 78 91 91 HIS HIS A . n A 1 79 PRO 79 92 92 PRO PRO A . n A 1 80 ASP 80 93 93 ASP ASP A . n A 1 81 SER 81 94 94 SER SER A . n A 1 82 GLN 82 95 95 GLN GLN A . n A 1 83 PRO 83 96 96 PRO PRO A . n A 1 84 ASP 84 97 97 ASP ASP A . n A 1 85 THR 85 98 98 THR THR A . n A 1 86 ILE 86 99 99 ILE ILE A . n A 1 87 ASP 87 100 100 ASP ASP A . n A 1 88 HIS 88 101 101 HIS HIS A . n A 1 89 ASP 89 102 102 ASP ASP A . n A 1 90 LEU 90 103 103 LEU LEU A . n A 1 91 LEU 91 104 104 LEU LEU A . n A 1 92 LEU 92 105 105 LEU LEU A . n A 1 93 LEU 93 106 106 LEU LEU A . n A 1 94 GLN 94 107 107 GLN GLN A . n A 1 95 LEU 95 108 108 LEU LEU A . n A 1 96 SER 96 109 109 SER SER A . n A 1 97 GLU 97 110 110 GLU GLU A . n A 1 98 LYS 98 111 111 LYS LYS A . n A 1 99 ALA 99 112 112 ALA ALA A . n A 1 100 THR 100 113 113 THR THR A . n A 1 101 LEU 101 114 114 LEU LEU A . n A 1 102 GLY 102 115 115 GLY GLY A . n A 1 103 PRO 103 118 118 PRO PRO A . n A 1 104 ALA 104 119 119 ALA ALA A . n A 1 105 VAL 105 120 120 VAL VAL A . n A 1 106 ARG 106 121 121 ARG ARG A . n A 1 107 PRO 107 122 122 PRO PRO A . n A 1 108 LEU 108 123 123 LEU LEU A . n A 1 109 PRO 109 124 124 PRO PRO A . n A 1 110 TRP 110 124 124 TRP TRP A A n A 1 111 GLN 111 125 125 GLN GLN A . n A 1 112 ARG 112 126 126 ARG ARG A . n A 1 113 VAL 113 127 127 VAL VAL A . n A 1 114 ASP 114 128 128 ASP ASP A . n A 1 115 ARG 115 129 129 ARG ARG A . n A 1 116 ASP 116 129 129 ASP ASP A A n A 1 117 VAL 117 130 130 VAL VAL A . n A 1 118 ALA 118 131 131 ALA ALA A . n A 1 119 PRO 119 132 132 PRO PRO A . n A 1 120 GLY 120 133 133 GLY GLY A . n A 1 121 THR 121 134 134 THR THR A . n A 1 122 LEU 122 135 135 LEU LEU A . n A 1 123 CYS 123 136 136 CYS CYS A . n A 1 124 ASP 124 137 137 ASP ASP A . n A 1 125 VAL 125 138 138 VAL VAL A . n A 1 126 ALA 126 139 139 ALA ALA A . n A 1 127 GLY 127 140 140 GLY GLY A . n A 1 128 TRP 128 141 141 TRP TRP A . n A 1 129 GLY 129 142 142 GLY GLY A . n A 1 130 ILE 130 143 143 ILE ILE A . n A 1 131 VAL 131 144 144 VAL VAL A . n A 1 132 ASN 132 145 145 ASN ASN A . n A 1 133 HIS 133 146 146 HIS HIS A . n A 1 134 ALA 134 147 147 ALA ALA A . n A 1 135 GLY 135 149 149 GLY GLY A . n A 1 136 ARG 136 150 150 ARG ARG A . n A 1 137 ARG 137 151 151 ARG ARG A . n A 1 138 PRO 138 152 152 PRO PRO A . n A 1 139 ASP 139 153 153 ASP ASP A . n A 1 140 SER 140 154 154 SER SER A . n A 1 141 LEU 141 155 155 LEU LEU A . n A 1 142 GLN 142 156 156 GLN GLN A . n A 1 143 HIS 143 157 157 HIS HIS A . n A 1 144 VAL 144 158 158 VAL VAL A . n A 1 145 LEU 145 159 159 LEU LEU A . n A 1 146 LEU 146 160 160 LEU LEU A . n A 1 147 PRO 147 161 161 PRO PRO A . n A 1 148 VAL 148 162 162 VAL VAL A . n A 1 149 LEU 149 163 163 LEU LEU A . n A 1 150 ASP 150 164 164 ASP ASP A . n A 1 151 ARG 151 165 165 ARG ARG A . n A 1 152 ALA 152 166 166 ALA ALA A . n A 1 153 THR 153 167 167 THR THR A . n A 1 154 CYS 154 168 168 CYS CYS A . n A 1 155 ASN 155 169 169 ASN ASN A . n A 1 156 ARG 156 170 170 ARG ARG A . n A 1 157 ARG 157 170 170 ARG ARG A A n A 1 158 THR 158 170 170 THR THR A B n A 1 159 HIS 159 171 171 HIS HIS A . n A 1 160 HIS 160 172 172 HIS HIS A . n A 1 161 ASP 161 173 173 ASP ASP A . n A 1 162 GLY 162 174 174 GLY GLY A . n A 1 163 ALA 163 175 175 ALA ALA A . n A 1 164 ILE 164 176 176 ILE ILE A . n A 1 165 THR 165 177 177 THR THR A . n A 1 166 GLU 166 178 178 GLU GLU A . n A 1 167 ARG 167 179 179 ARG ARG A . n A 1 168 LEU 168 180 180 LEU LEU A . n A 1 169 MET 169 181 181 MET MET A . n A 1 170 CYS 170 182 182 CYS CYS A . n A 1 171 ALA 171 183 183 ALA ALA A . n A 1 172 GLU 172 184 184 GLU GLU A . n A 1 173 SER 173 185 185 SER SER A . n A 1 174 ASN 174 186 186 ASN ASN A . n A 1 175 ARG 175 187 187 ARG ARG A . n A 1 176 ARG 176 188 188 ARG ARG A . n A 1 177 ASP 177 189 189 ASP ASP A . n A 1 178 SER 178 190 190 SER SER A . n A 1 179 CYS 179 191 191 CYS CYS A . n A 1 180 LYS 180 192 192 LYS LYS A . n A 1 181 GLY 181 193 193 GLY GLY A . n A 1 182 ASP 182 194 194 ASP ASP A . n A 1 183 SER 183 195 195 SER SER A . n A 1 184 GLY 184 196 196 GLY GLY A . n A 1 185 GLY 185 197 197 GLY GLY A . n A 1 186 PRO 186 198 198 PRO PRO A . n A 1 187 LEU 187 199 199 LEU LEU A . n A 1 188 VAL 188 200 200 VAL VAL A . n A 1 189 CYS 189 201 201 CYS CYS A . n A 1 190 GLY 190 202 202 GLY GLY A . n A 1 191 GLY 191 207 207 GLY GLY A . n A 1 192 VAL 192 208 208 VAL VAL A . n A 1 193 LEU 193 209 209 LEU LEU A . n A 1 194 GLU 194 210 210 GLU GLU A . n A 1 195 GLY 195 211 211 GLY GLY A . n A 1 196 VAL 196 212 212 VAL VAL A . n A 1 197 VAL 197 213 213 VAL VAL A . n A 1 198 THR 198 214 214 THR THR A . n A 1 199 SER 199 215 215 SER SER A . n A 1 200 GLY 200 216 216 GLY GLY A . n A 1 201 SER 201 217 217 SER SER A . n A 1 202 ARG 202 218 218 ARG ARG A . n A 1 203 VAL 203 219 219 VAL VAL A . n A 1 204 CYS 204 220 220 CYS CYS A . n A 1 205 GLY 205 221 221 GLY GLY A . n A 1 206 ASN 206 222 222 ASN ASN A . n A 1 207 ARG 207 223 223 ARG ARG A . n A 1 208 LYS 208 223 223 LYS LYS A A n A 1 209 LYS 209 224 224 LYS LYS A . n A 1 210 PRO 210 225 225 PRO PRO A . n A 1 211 GLY 211 226 226 GLY GLY A . n A 1 212 ILE 212 227 227 ILE ILE A . n A 1 213 TYR 213 228 228 TYR TYR A . n A 1 214 THR 214 229 229 THR THR A . n A 1 215 ARG 215 230 230 ARG ARG A . n A 1 216 VAL 216 231 231 VAL VAL A . n A 1 217 ALA 217 232 232 ALA ALA A . n A 1 218 SER 218 233 233 SER SER A . n A 1 219 TYR 219 234 234 TYR TYR A . n A 1 220 ALA 220 235 235 ALA ALA A . n A 1 221 ALA 221 236 236 ALA ALA A . n A 1 222 TRP 222 237 237 TRP TRP A . n A 1 223 ILE 223 238 238 ILE ILE A . n A 1 224 ASP 224 239 239 ASP ASP A . n A 1 225 SER 225 240 240 SER SER A . n A 1 226 VAL 226 241 241 VAL VAL A . n A 1 227 LEU 227 242 242 LEU LEU A . n A 1 228 ALA 228 243 243 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DIC 1 244 244 DIC DIC A . C 3 O 1 245 245 O O A . D 3 O 1 246 246 O O A . E 4 HOH 1 300 300 HOH HOH A . E 4 HOH 2 301 301 HOH HOH A . E 4 HOH 3 302 302 HOH HOH A . E 4 HOH 4 303 303 HOH HOH A . E 4 HOH 5 304 304 HOH HOH A . E 4 HOH 6 305 305 HOH HOH A . E 4 HOH 7 306 306 HOH HOH A . E 4 HOH 8 307 307 HOH HOH A . E 4 HOH 9 308 308 HOH HOH A . E 4 HOH 10 309 309 HOH HOH A . E 4 HOH 11 310 310 HOH HOH A . E 4 HOH 12 311 311 HOH HOH A . E 4 HOH 13 312 312 HOH HOH A . E 4 HOH 14 313 313 HOH HOH A . E 4 HOH 15 314 314 HOH HOH A . E 4 HOH 16 315 315 HOH HOH A . E 4 HOH 17 316 316 HOH HOH A . E 4 HOH 18 317 317 HOH HOH A . E 4 HOH 19 318 318 HOH HOH A . E 4 HOH 20 319 319 HOH HOH A . E 4 HOH 21 320 320 HOH HOH A . E 4 HOH 22 321 321 HOH HOH A . E 4 HOH 23 322 322 HOH HOH A . E 4 HOH 24 323 323 HOH HOH A . E 4 HOH 25 324 324 HOH HOH A . E 4 HOH 26 325 325 HOH HOH A . E 4 HOH 27 326 326 HOH HOH A . E 4 HOH 28 327 327 HOH HOH A . E 4 HOH 29 328 328 HOH HOH A . E 4 HOH 30 329 329 HOH HOH A . E 4 HOH 31 330 330 HOH HOH A . E 4 HOH 32 331 331 HOH HOH A . E 4 HOH 33 332 332 HOH HOH A . E 4 HOH 34 333 333 HOH HOH A . E 4 HOH 35 334 334 HOH HOH A . E 4 HOH 36 335 335 HOH HOH A . E 4 HOH 37 336 336 HOH HOH A . E 4 HOH 38 337 337 HOH HOH A . E 4 HOH 39 338 338 HOH HOH A . E 4 HOH 40 339 339 HOH HOH A . E 4 HOH 41 340 340 HOH HOH A . E 4 HOH 42 341 341 HOH HOH A . E 4 HOH 43 342 342 HOH HOH A . E 4 HOH 44 343 343 HOH HOH A . E 4 HOH 45 344 344 HOH HOH A . E 4 HOH 46 345 345 HOH HOH A . E 4 HOH 47 346 346 HOH HOH A . E 4 HOH 48 347 347 HOH HOH A . E 4 HOH 49 348 348 HOH HOH A . E 4 HOH 50 349 349 HOH HOH A . E 4 HOH 51 350 350 HOH HOH A . E 4 HOH 52 351 351 HOH HOH A . E 4 HOH 53 352 352 HOH HOH A . E 4 HOH 54 353 353 HOH HOH A . E 4 HOH 55 354 354 HOH HOH A . E 4 HOH 56 355 355 HOH HOH A . E 4 HOH 57 356 356 HOH HOH A . E 4 HOH 58 357 357 HOH HOH A . E 4 HOH 59 358 358 HOH HOH A . E 4 HOH 60 359 359 HOH HOH A . E 4 HOH 61 360 360 HOH HOH A . E 4 HOH 62 361 361 HOH HOH A . E 4 HOH 63 362 362 HOH HOH A . E 4 HOH 64 363 363 HOH HOH A . E 4 HOH 65 364 364 HOH HOH A . E 4 HOH 66 365 365 HOH HOH A . E 4 HOH 67 366 366 HOH HOH A . E 4 HOH 68 367 367 HOH HOH A . E 4 HOH 69 368 368 HOH HOH A . E 4 HOH 70 369 369 HOH HOH A . E 4 HOH 71 370 370 HOH HOH A . E 4 HOH 72 371 371 HOH HOH A . E 4 HOH 73 372 372 HOH HOH A . E 4 HOH 74 373 373 HOH HOH A . E 4 HOH 75 374 374 HOH HOH A . E 4 HOH 76 375 375 HOH HOH A . E 4 HOH 77 376 376 HOH HOH A . E 4 HOH 78 377 377 HOH HOH A . E 4 HOH 79 378 378 HOH HOH A . E 4 HOH 80 379 379 HOH HOH A . E 4 HOH 81 380 380 HOH HOH A . E 4 HOH 82 381 381 HOH HOH A . E 4 HOH 83 382 382 HOH HOH A . E 4 HOH 84 383 383 HOH HOH A . E 4 HOH 85 384 384 HOH HOH A . E 4 HOH 86 385 385 HOH HOH A . E 4 HOH 87 386 386 HOH HOH A . E 4 HOH 88 387 387 HOH HOH A . E 4 HOH 89 388 388 HOH HOH A . E 4 HOH 90 389 389 HOH HOH A . E 4 HOH 91 390 390 HOH HOH A . E 4 HOH 92 391 391 HOH HOH A . E 4 HOH 93 392 392 HOH HOH A . E 4 HOH 94 393 393 HOH HOH A . E 4 HOH 95 394 394 HOH HOH A . E 4 HOH 96 395 395 HOH HOH A . E 4 HOH 97 396 396 HOH HOH A . E 4 HOH 98 397 397 HOH HOH A . E 4 HOH 99 398 398 HOH HOH A . E 4 HOH 100 399 399 HOH HOH A . E 4 HOH 101 400 400 HOH HOH A . E 4 HOH 102 401 401 HOH HOH A . E 4 HOH 103 402 402 HOH HOH A . E 4 HOH 104 403 403 HOH HOH A . E 4 HOH 105 404 404 HOH HOH A . E 4 HOH 106 405 405 HOH HOH A . E 4 HOH 107 406 406 HOH HOH A . E 4 HOH 108 407 407 HOH HOH A . E 4 HOH 109 408 408 HOH HOH A . E 4 HOH 110 409 409 HOH HOH A . E 4 HOH 111 410 410 HOH HOH A . E 4 HOH 112 411 411 HOH HOH A . E 4 HOH 113 412 412 HOH HOH A . E 4 HOH 114 413 413 HOH HOH A . E 4 HOH 115 414 414 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id DIC _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 244 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CL1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id B _pdbx_unobs_or_zero_occ_atoms.label_comp_id DIC _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CL1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XENGEN 'data collection' . ? 1 XENGEN 'data reduction' . ? 2 X-PLOR 'model building' . ? 3 X-PLOR refinement . ? 4 XENGEN 'data scaling' . ? 5 X-PLOR phasing . ? 6 # _cell.entry_id 1DIC _cell.length_a 56.300 _cell.length_b 51.570 _cell.length_c 39.840 _cell.angle_alpha 90.00 _cell.angle_beta 106.05 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DIC _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 1DIC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.89 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 5.6' # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'SIEMENS X1000' _diffrn_detector.pdbx_collection_date 1995-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DIC _reflns.observed_criterion_sigma_I 2. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.0 _reflns.d_resolution_high 1.8 _reflns.number_obs 18850 _reflns.number_all ? _reflns.percent_possible_obs 92 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value 0.0823 _reflns.pdbx_netI_over_sigmaI 37.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.65 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.91 _reflns_shell.percent_possible_all 57.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.22 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1DIC _refine.ls_number_reflns_obs 17696 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 100000000. _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs 90 _refine.ls_R_factor_obs 0.182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.251 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10. _refine.ls_number_reflns_R_free 1398 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1DSU' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1712 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 1841 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.6 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.3 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.5 ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.0 ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.0 ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 2.5 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.88 _refine_ls_shell.number_reflns_R_work 585 _refine_ls_shell.R_factor_R_work 0.264 _refine_ls_shell.percent_reflns_obs 44.0 _refine_ls_shell.R_factor_R_free 0.348 _refine_ls_shell.R_factor_R_free_error 0.064 _refine_ls_shell.percent_reflns_R_free 2.1 _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 ? TOPH19.PEP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1DIC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DIC _struct.title 'STRUCTURE OF 3,4-DICHLOROISOCOUMARIN-INHIBITED FACTOR D' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DIC _struct_keywords.pdbx_keywords 'SERINE PROTEASE' _struct_keywords.text 'SERINE PROTEASE, COMPLEMENT, FACTOR D, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CFAD_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00746 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MHSSVYFAVLVLLGAAACAARPRGRILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLL GAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAG RRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRKKPGIYTR VASYAAWIDSVLA ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DIC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 228 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00746 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 253 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 243 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 40 ? ALA A 46 A ALA A 56 ALA A 61 1 ? 7 HELX_P HELX_P2 2 ARG A 151 ? ASN A 155 ? ARG A 165 ASN A 169 1 ? 5 HELX_P HELX_P3 3 ALA A 217 ? VAL A 226 ? ALA A 232 VAL A 241 5 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 42 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 123 SG ? ? ? 1_555 A CYS 189 SG ? ? A CYS 136 A CYS 201 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 154 SG ? ? ? 1_555 A CYS 170 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.025 ? ? disulf4 disulf ? ? A CYS 179 SG ? ? ? 1_555 A CYS 204 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale none ? A SER 183 OG ? ? ? 1_555 B DIC . C7 ? ? A SER 195 A DIC 244 1_555 ? ? ? ? ? ? ? 1.294 ? ? covale2 covale one ? B DIC . C9 ? ? ? 1_555 C O . O ? ? A DIC 244 A O 245 1_555 ? ? ? ? ? ? ? 1.250 ? ? covale3 covale one ? B DIC . C9 ? ? ? 1_555 D O . O ? ? A DIC 244 A O 246 1_555 ? ? ? ? ? ? ? 1.249 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 DIC B . ? SER A 183 ? DIC A 244 ? 1_555 SER A 195 ? 1_555 C7 OG SER 1 DIC None 'Covalent chemical modification' 2 CYS A 26 ? CYS A 42 ? CYS A 42 ? 1_555 CYS A 58 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 123 ? CYS A 189 ? CYS A 136 ? 1_555 CYS A 201 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 154 ? CYS A 170 ? CYS A 168 ? 1_555 CYS A 182 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 179 ? CYS A 204 ? CYS A 191 ? 1_555 CYS A 220 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 68 ? ASP A 71 ? ARG A 81 ASP A 84 A 2 VAL A 51 ? LEU A 55 ? VAL A 64 LEU A 68 A 3 MET A 15 ? LEU A 20 ? MET A 30 LEU A 35 A 4 ALA A 23 ? ALA A 32 ? ALA A 39 ALA A 48 A 5 TRP A 35 ? SER A 38 ? TRP A 51 SER A 54 A 6 LEU A 91 ? LEU A 95 ? LEU A 104 LEU A 108 A 7 VAL A 72 ? PRO A 77 ? VAL A 85 PRO A 90 B 1 LEU A 122 ? GLY A 127 ? LEU A 135 GLY A 140 B 2 GLN A 142 ? PRO A 147 ? GLN A 156 PRO A 161 C 1 LEU A 168 ? ALA A 171 ? LEU A 180 ALA A 183 C 2 GLY A 211 ? ARG A 215 ? GLY A 226 ARG A 230 C 3 VAL A 192 ? VAL A 197 ? VAL A 208 VAL A 213 C 4 PRO A 186 ? CYS A 189 ? PRO A 198 CYS A 201 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 68 ? O ARG A 81 N LEU A 55 ? N LEU A 68 A 2 3 O GLN A 52 ? O GLN A 65 N GLN A 19 ? N GLN A 34 A 3 4 O ALA A 16 ? O ALA A 31 N GLY A 28 ? N GLY A 44 A 4 5 O VAL A 29 ? O VAL A 45 N LEU A 37 ? N LEU A 53 A 5 6 O VAL A 36 ? O VAL A 52 N LEU A 93 ? N LEU A 106 A 6 7 O LEU A 92 ? O LEU A 105 N VAL A 76 ? N VAL A 89 B 1 2 O CYS A 123 ? O CYS A 136 N LEU A 146 ? N LEU A 160 C 1 2 O MET A 169 ? O MET A 181 N TYR A 213 ? N TYR A 228 C 2 3 O THR A 214 ? O THR A 229 N VAL A 196 ? N VAL A 212 C 3 4 O VAL A 192 ? O VAL A 208 N CYS A 189 ? N CYS A 201 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details S1 Unknown ? ? ? ? 1 '3,4-DICHLOROISOCOUMARIN MOIETY LINKED TO O ATOM OF SER 195.' AC1 Software A DIC 244 ? 8 'BINDING SITE FOR RESIDUE DIC A 244' AC2 Software A O 245 ? 5 'BINDING SITE FOR RESIDUE O A 245' AC3 Software A O 246 ? 2 'BINDING SITE FOR RESIDUE O A 246' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 S1 1 DIC B . ? DIC A 244 . ? 1_555 ? 2 AC1 8 LYS A 180 ? LYS A 192 . ? 1_555 ? 3 AC1 8 SER A 183 ? SER A 195 . ? 1_555 ? 4 AC1 8 THR A 198 ? THR A 214 . ? 1_555 ? 5 AC1 8 SER A 199 ? SER A 215 . ? 1_555 ? 6 AC1 8 GLY A 200 ? GLY A 216 . ? 1_555 ? 7 AC1 8 ARG A 202 ? ARG A 218 . ? 1_555 ? 8 AC1 8 O C . ? O A 245 . ? 1_555 ? 9 AC1 8 O D . ? O A 246 . ? 1_555 ? 10 AC2 5 LYS A 180 ? LYS A 192 . ? 1_555 ? 11 AC2 5 GLY A 181 ? GLY A 193 . ? 1_555 ? 12 AC2 5 SER A 183 ? SER A 195 . ? 1_555 ? 13 AC2 5 DIC B . ? DIC A 244 . ? 1_555 ? 14 AC2 5 O D . ? O A 246 . ? 1_555 ? 15 AC3 2 DIC B . ? DIC A 244 . ? 1_555 ? 16 AC3 2 O C . ? O A 245 . ? 1_555 ? # _pdbx_entry_details.entry_id 1DIC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 O _pdbx_validate_close_contact.auth_seq_id_1 245 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 O _pdbx_validate_close_contact.auth_seq_id_2 246 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 41 ? ? -122.15 -52.06 2 1 HIS A 71 ? ? -123.52 -52.33 3 1 HIS A 171 ? ? -123.70 -116.62 4 1 HIS A 172 ? ? -106.20 75.48 5 1 ASP A 173 ? ? -46.02 90.74 6 1 ARG A 187 ? ? 71.55 -10.37 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DIC C1 C Y N 88 DIC C2 C Y N 89 DIC C3 C Y N 90 DIC C4 C Y N 91 DIC C5 C Y N 92 DIC C6 C Y N 93 DIC C7 C Y N 94 DIC O7 O N N 95 DIC C8 C Y N 96 DIC C9 C Y N 97 DIC O1 O Y N 98 DIC CL1 CL N N 99 DIC CL2 CL N N 100 DIC H1 H N N 101 DIC H2 H N N 102 DIC H5 H N N 103 DIC H6 H N N 104 GLN N N N N 105 GLN CA C N S 106 GLN C C N N 107 GLN O O N N 108 GLN CB C N N 109 GLN CG C N N 110 GLN CD C N N 111 GLN OE1 O N N 112 GLN NE2 N N N 113 GLN OXT O N N 114 GLN H H N N 115 GLN H2 H N N 116 GLN HA H N N 117 GLN HB2 H N N 118 GLN HB3 H N N 119 GLN HG2 H N N 120 GLN HG3 H N N 121 GLN HE21 H N N 122 GLN HE22 H N N 123 GLN HXT H N N 124 GLU N N N N 125 GLU CA C N S 126 GLU C C N N 127 GLU O O N N 128 GLU CB C N N 129 GLU CG C N N 130 GLU CD C N N 131 GLU OE1 O N N 132 GLU OE2 O N N 133 GLU OXT O N N 134 GLU H H N N 135 GLU H2 H N N 136 GLU HA H N N 137 GLU HB2 H N N 138 GLU HB3 H N N 139 GLU HG2 H N N 140 GLU HG3 H N N 141 GLU HE2 H N N 142 GLU HXT H N N 143 GLY N N N N 144 GLY CA C N N 145 GLY C C N N 146 GLY O O N N 147 GLY OXT O N N 148 GLY H H N N 149 GLY H2 H N N 150 GLY HA2 H N N 151 GLY HA3 H N N 152 GLY HXT H N N 153 HIS N N N N 154 HIS CA C N S 155 HIS C C N N 156 HIS O O N N 157 HIS CB C N N 158 HIS CG C Y N 159 HIS ND1 N Y N 160 HIS CD2 C Y N 161 HIS CE1 C Y N 162 HIS NE2 N Y N 163 HIS OXT O N N 164 HIS H H N N 165 HIS H2 H N N 166 HIS HA H N N 167 HIS HB2 H N N 168 HIS HB3 H N N 169 HIS HD1 H N N 170 HIS HD2 H N N 171 HIS HE1 H N N 172 HIS HE2 H N N 173 HIS HXT H N N 174 HOH O O N N 175 HOH H1 H N N 176 HOH H2 H N N 177 ILE N N N N 178 ILE CA C N S 179 ILE C C N N 180 ILE O O N N 181 ILE CB C N S 182 ILE CG1 C N N 183 ILE CG2 C N N 184 ILE CD1 C N N 185 ILE OXT O N N 186 ILE H H N N 187 ILE H2 H N N 188 ILE HA H N N 189 ILE HB H N N 190 ILE HG12 H N N 191 ILE HG13 H N N 192 ILE HG21 H N N 193 ILE HG22 H N N 194 ILE HG23 H N N 195 ILE HD11 H N N 196 ILE HD12 H N N 197 ILE HD13 H N N 198 ILE HXT H N N 199 LEU N N N N 200 LEU CA C N S 201 LEU C C N N 202 LEU O O N N 203 LEU CB C N N 204 LEU CG C N N 205 LEU CD1 C N N 206 LEU CD2 C N N 207 LEU OXT O N N 208 LEU H H N N 209 LEU H2 H N N 210 LEU HA H N N 211 LEU HB2 H N N 212 LEU HB3 H N N 213 LEU HG H N N 214 LEU HD11 H N N 215 LEU HD12 H N N 216 LEU HD13 H N N 217 LEU HD21 H N N 218 LEU HD22 H N N 219 LEU HD23 H N N 220 LEU HXT H N N 221 LYS N N N N 222 LYS CA C N S 223 LYS C C N N 224 LYS O O N N 225 LYS CB C N N 226 LYS CG C N N 227 LYS CD C N N 228 LYS CE C N N 229 LYS NZ N N N 230 LYS OXT O N N 231 LYS H H N N 232 LYS H2 H N N 233 LYS HA H N N 234 LYS HB2 H N N 235 LYS HB3 H N N 236 LYS HG2 H N N 237 LYS HG3 H N N 238 LYS HD2 H N N 239 LYS HD3 H N N 240 LYS HE2 H N N 241 LYS HE3 H N N 242 LYS HZ1 H N N 243 LYS HZ2 H N N 244 LYS HZ3 H N N 245 LYS HXT H N N 246 MET N N N N 247 MET CA C N S 248 MET C C N N 249 MET O O N N 250 MET CB C N N 251 MET CG C N N 252 MET SD S N N 253 MET CE C N N 254 MET OXT O N N 255 MET H H N N 256 MET H2 H N N 257 MET HA H N N 258 MET HB2 H N N 259 MET HB3 H N N 260 MET HG2 H N N 261 MET HG3 H N N 262 MET HE1 H N N 263 MET HE2 H N N 264 MET HE3 H N N 265 MET HXT H N N 266 O O O N N 267 PRO N N N N 268 PRO CA C N S 269 PRO C C N N 270 PRO O O N N 271 PRO CB C N N 272 PRO CG C N N 273 PRO CD C N N 274 PRO OXT O N N 275 PRO H H N N 276 PRO HA H N N 277 PRO HB2 H N N 278 PRO HB3 H N N 279 PRO HG2 H N N 280 PRO HG3 H N N 281 PRO HD2 H N N 282 PRO HD3 H N N 283 PRO HXT H N N 284 SER N N N N 285 SER CA C N S 286 SER C C N N 287 SER O O N N 288 SER CB C N N 289 SER OG O N N 290 SER OXT O N N 291 SER H H N N 292 SER H2 H N N 293 SER HA H N N 294 SER HB2 H N N 295 SER HB3 H N N 296 SER HG H N N 297 SER HXT H N N 298 THR N N N N 299 THR CA C N S 300 THR C C N N 301 THR O O N N 302 THR CB C N R 303 THR OG1 O N N 304 THR CG2 C N N 305 THR OXT O N N 306 THR H H N N 307 THR H2 H N N 308 THR HA H N N 309 THR HB H N N 310 THR HG1 H N N 311 THR HG21 H N N 312 THR HG22 H N N 313 THR HG23 H N N 314 THR HXT H N N 315 TRP N N N N 316 TRP CA C N S 317 TRP C C N N 318 TRP O O N N 319 TRP CB C N N 320 TRP CG C Y N 321 TRP CD1 C Y N 322 TRP CD2 C Y N 323 TRP NE1 N Y N 324 TRP CE2 C Y N 325 TRP CE3 C Y N 326 TRP CZ2 C Y N 327 TRP CZ3 C Y N 328 TRP CH2 C Y N 329 TRP OXT O N N 330 TRP H H N N 331 TRP H2 H N N 332 TRP HA H N N 333 TRP HB2 H N N 334 TRP HB3 H N N 335 TRP HD1 H N N 336 TRP HE1 H N N 337 TRP HE3 H N N 338 TRP HZ2 H N N 339 TRP HZ3 H N N 340 TRP HH2 H N N 341 TRP HXT H N N 342 TYR N N N N 343 TYR CA C N S 344 TYR C C N N 345 TYR O O N N 346 TYR CB C N N 347 TYR CG C Y N 348 TYR CD1 C Y N 349 TYR CD2 C Y N 350 TYR CE1 C Y N 351 TYR CE2 C Y N 352 TYR CZ C Y N 353 TYR OH O N N 354 TYR OXT O N N 355 TYR H H N N 356 TYR H2 H N N 357 TYR HA H N N 358 TYR HB2 H N N 359 TYR HB3 H N N 360 TYR HD1 H N N 361 TYR HD2 H N N 362 TYR HE1 H N N 363 TYR HE2 H N N 364 TYR HH H N N 365 TYR HXT H N N 366 VAL N N N N 367 VAL CA C N S 368 VAL C C N N 369 VAL O O N N 370 VAL CB C N N 371 VAL CG1 C N N 372 VAL CG2 C N N 373 VAL OXT O N N 374 VAL H H N N 375 VAL H2 H N N 376 VAL HA H N N 377 VAL HB H N N 378 VAL HG11 H N N 379 VAL HG12 H N N 380 VAL HG13 H N N 381 VAL HG21 H N N 382 VAL HG22 H N N 383 VAL HG23 H N N 384 VAL HXT H N N 385 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DIC C1 C2 doub Y N 83 DIC C1 C6 sing Y N 84 DIC C1 H1 sing N N 85 DIC C2 C3 sing Y N 86 DIC C2 H2 sing N N 87 DIC C3 C4 doub Y N 88 DIC C3 C8 sing Y N 89 DIC C4 C5 sing Y N 90 DIC C4 C7 sing Y N 91 DIC C5 C6 doub Y N 92 DIC C5 H5 sing N N 93 DIC C6 H6 sing N N 94 DIC C7 O7 doub N N 95 DIC C7 O1 sing Y N 96 DIC C8 C9 doub Y N 97 DIC C8 CL1 sing N N 98 DIC C9 O1 sing Y N 99 DIC C9 CL2 sing N N 100 GLN N CA sing N N 101 GLN N H sing N N 102 GLN N H2 sing N N 103 GLN CA C sing N N 104 GLN CA CB sing N N 105 GLN CA HA sing N N 106 GLN C O doub N N 107 GLN C OXT sing N N 108 GLN CB CG sing N N 109 GLN CB HB2 sing N N 110 GLN CB HB3 sing N N 111 GLN CG CD sing N N 112 GLN CG HG2 sing N N 113 GLN CG HG3 sing N N 114 GLN CD OE1 doub N N 115 GLN CD NE2 sing N N 116 GLN NE2 HE21 sing N N 117 GLN NE2 HE22 sing N N 118 GLN OXT HXT sing N N 119 GLU N CA sing N N 120 GLU N H sing N N 121 GLU N H2 sing N N 122 GLU CA C sing N N 123 GLU CA CB sing N N 124 GLU CA HA sing N N 125 GLU C O doub N N 126 GLU C OXT sing N N 127 GLU CB CG sing N N 128 GLU CB HB2 sing N N 129 GLU CB HB3 sing N N 130 GLU CG CD sing N N 131 GLU CG HG2 sing N N 132 GLU CG HG3 sing N N 133 GLU CD OE1 doub N N 134 GLU CD OE2 sing N N 135 GLU OE2 HE2 sing N N 136 GLU OXT HXT sing N N 137 GLY N CA sing N N 138 GLY N H sing N N 139 GLY N H2 sing N N 140 GLY CA C sing N N 141 GLY CA HA2 sing N N 142 GLY CA HA3 sing N N 143 GLY C O doub N N 144 GLY C OXT sing N N 145 GLY OXT HXT sing N N 146 HIS N CA sing N N 147 HIS N H sing N N 148 HIS N H2 sing N N 149 HIS CA C sing N N 150 HIS CA CB sing N N 151 HIS CA HA sing N N 152 HIS C O doub N N 153 HIS C OXT sing N N 154 HIS CB CG sing N N 155 HIS CB HB2 sing N N 156 HIS CB HB3 sing N N 157 HIS CG ND1 sing Y N 158 HIS CG CD2 doub Y N 159 HIS ND1 CE1 doub Y N 160 HIS ND1 HD1 sing N N 161 HIS CD2 NE2 sing Y N 162 HIS CD2 HD2 sing N N 163 HIS CE1 NE2 sing Y N 164 HIS CE1 HE1 sing N N 165 HIS NE2 HE2 sing N N 166 HIS OXT HXT sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 ILE N CA sing N N 170 ILE N H sing N N 171 ILE N H2 sing N N 172 ILE CA C sing N N 173 ILE CA CB sing N N 174 ILE CA HA sing N N 175 ILE C O doub N N 176 ILE C OXT sing N N 177 ILE CB CG1 sing N N 178 ILE CB CG2 sing N N 179 ILE CB HB sing N N 180 ILE CG1 CD1 sing N N 181 ILE CG1 HG12 sing N N 182 ILE CG1 HG13 sing N N 183 ILE CG2 HG21 sing N N 184 ILE CG2 HG22 sing N N 185 ILE CG2 HG23 sing N N 186 ILE CD1 HD11 sing N N 187 ILE CD1 HD12 sing N N 188 ILE CD1 HD13 sing N N 189 ILE OXT HXT sing N N 190 LEU N CA sing N N 191 LEU N H sing N N 192 LEU N H2 sing N N 193 LEU CA C sing N N 194 LEU CA CB sing N N 195 LEU CA HA sing N N 196 LEU C O doub N N 197 LEU C OXT sing N N 198 LEU CB CG sing N N 199 LEU CB HB2 sing N N 200 LEU CB HB3 sing N N 201 LEU CG CD1 sing N N 202 LEU CG CD2 sing N N 203 LEU CG HG sing N N 204 LEU CD1 HD11 sing N N 205 LEU CD1 HD12 sing N N 206 LEU CD1 HD13 sing N N 207 LEU CD2 HD21 sing N N 208 LEU CD2 HD22 sing N N 209 LEU CD2 HD23 sing N N 210 LEU OXT HXT sing N N 211 LYS N CA sing N N 212 LYS N H sing N N 213 LYS N H2 sing N N 214 LYS CA C sing N N 215 LYS CA CB sing N N 216 LYS CA HA sing N N 217 LYS C O doub N N 218 LYS C OXT sing N N 219 LYS CB CG sing N N 220 LYS CB HB2 sing N N 221 LYS CB HB3 sing N N 222 LYS CG CD sing N N 223 LYS CG HG2 sing N N 224 LYS CG HG3 sing N N 225 LYS CD CE sing N N 226 LYS CD HD2 sing N N 227 LYS CD HD3 sing N N 228 LYS CE NZ sing N N 229 LYS CE HE2 sing N N 230 LYS CE HE3 sing N N 231 LYS NZ HZ1 sing N N 232 LYS NZ HZ2 sing N N 233 LYS NZ HZ3 sing N N 234 LYS OXT HXT sing N N 235 MET N CA sing N N 236 MET N H sing N N 237 MET N H2 sing N N 238 MET CA C sing N N 239 MET CA CB sing N N 240 MET CA HA sing N N 241 MET C O doub N N 242 MET C OXT sing N N 243 MET CB CG sing N N 244 MET CB HB2 sing N N 245 MET CB HB3 sing N N 246 MET CG SD sing N N 247 MET CG HG2 sing N N 248 MET CG HG3 sing N N 249 MET SD CE sing N N 250 MET CE HE1 sing N N 251 MET CE HE2 sing N N 252 MET CE HE3 sing N N 253 MET OXT HXT sing N N 254 PRO N CA sing N N 255 PRO N CD sing N N 256 PRO N H sing N N 257 PRO CA C sing N N 258 PRO CA CB sing N N 259 PRO CA HA sing N N 260 PRO C O doub N N 261 PRO C OXT sing N N 262 PRO CB CG sing N N 263 PRO CB HB2 sing N N 264 PRO CB HB3 sing N N 265 PRO CG CD sing N N 266 PRO CG HG2 sing N N 267 PRO CG HG3 sing N N 268 PRO CD HD2 sing N N 269 PRO CD HD3 sing N N 270 PRO OXT HXT sing N N 271 SER N CA sing N N 272 SER N H sing N N 273 SER N H2 sing N N 274 SER CA C sing N N 275 SER CA CB sing N N 276 SER CA HA sing N N 277 SER C O doub N N 278 SER C OXT sing N N 279 SER CB OG sing N N 280 SER CB HB2 sing N N 281 SER CB HB3 sing N N 282 SER OG HG sing N N 283 SER OXT HXT sing N N 284 THR N CA sing N N 285 THR N H sing N N 286 THR N H2 sing N N 287 THR CA C sing N N 288 THR CA CB sing N N 289 THR CA HA sing N N 290 THR C O doub N N 291 THR C OXT sing N N 292 THR CB OG1 sing N N 293 THR CB CG2 sing N N 294 THR CB HB sing N N 295 THR OG1 HG1 sing N N 296 THR CG2 HG21 sing N N 297 THR CG2 HG22 sing N N 298 THR CG2 HG23 sing N N 299 THR OXT HXT sing N N 300 TRP N CA sing N N 301 TRP N H sing N N 302 TRP N H2 sing N N 303 TRP CA C sing N N 304 TRP CA CB sing N N 305 TRP CA HA sing N N 306 TRP C O doub N N 307 TRP C OXT sing N N 308 TRP CB CG sing N N 309 TRP CB HB2 sing N N 310 TRP CB HB3 sing N N 311 TRP CG CD1 doub Y N 312 TRP CG CD2 sing Y N 313 TRP CD1 NE1 sing Y N 314 TRP CD1 HD1 sing N N 315 TRP CD2 CE2 doub Y N 316 TRP CD2 CE3 sing Y N 317 TRP NE1 CE2 sing Y N 318 TRP NE1 HE1 sing N N 319 TRP CE2 CZ2 sing Y N 320 TRP CE3 CZ3 doub Y N 321 TRP CE3 HE3 sing N N 322 TRP CZ2 CH2 doub Y N 323 TRP CZ2 HZ2 sing N N 324 TRP CZ3 CH2 sing Y N 325 TRP CZ3 HZ3 sing N N 326 TRP CH2 HH2 sing N N 327 TRP OXT HXT sing N N 328 TYR N CA sing N N 329 TYR N H sing N N 330 TYR N H2 sing N N 331 TYR CA C sing N N 332 TYR CA CB sing N N 333 TYR CA HA sing N N 334 TYR C O doub N N 335 TYR C OXT sing N N 336 TYR CB CG sing N N 337 TYR CB HB2 sing N N 338 TYR CB HB3 sing N N 339 TYR CG CD1 doub Y N 340 TYR CG CD2 sing Y N 341 TYR CD1 CE1 sing Y N 342 TYR CD1 HD1 sing N N 343 TYR CD2 CE2 doub Y N 344 TYR CD2 HD2 sing N N 345 TYR CE1 CZ doub Y N 346 TYR CE1 HE1 sing N N 347 TYR CE2 CZ sing Y N 348 TYR CE2 HE2 sing N N 349 TYR CZ OH sing N N 350 TYR OH HH sing N N 351 TYR OXT HXT sing N N 352 VAL N CA sing N N 353 VAL N H sing N N 354 VAL N H2 sing N N 355 VAL CA C sing N N 356 VAL CA CB sing N N 357 VAL CA HA sing N N 358 VAL C O doub N N 359 VAL C OXT sing N N 360 VAL CB CG1 sing N N 361 VAL CB CG2 sing N N 362 VAL CB HB sing N N 363 VAL CG1 HG11 sing N N 364 VAL CG1 HG12 sing N N 365 VAL CG1 HG13 sing N N 366 VAL CG2 HG21 sing N N 367 VAL CG2 HG22 sing N N 368 VAL CG2 HG23 sing N N 369 VAL OXT HXT sing N N 370 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DSU _pdbx_initial_refinement_model.details 'PDB ENTRY 1DSU' # _atom_sites.entry_id 1DIC _atom_sites.fract_transf_matrix[1][1] 0.017762 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005110 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019391 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026118 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_