data_1DXY # _entry.id 1DXY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DXY pdb_00001dxy 10.2210/pdb1dxy/pdb WWPDB D_1000172961 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-06-16 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2017-03-15 6 'Structure model' 1 5 2023-08-09 7 'Structure model' 1 6 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Atomic model' 5 5 'Structure model' 'Derived calculations' 6 6 'Structure model' 'Database references' 7 6 'Structure model' Other 8 6 'Structure model' 'Refinement description' 9 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' database_2 2 6 'Structure model' pdbx_database_status 3 6 'Structure model' pdbx_initial_refinement_model 4 6 'Structure model' software 5 7 'Structure model' chem_comp_atom 6 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_pdbx_database_status.process_site' 4 6 'Structure model' '_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DXY _pdbx_database_status.recvd_initial_deposition_date 1996-08-13 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dengler, U.' 1 'Niefind, K.' 2 'Kiess, M.' 3 'Schomburg, D.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal structure of a ternary complex of D-2-hydroxyisocaproate dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate at 1.9 A resolution. ; J.Mol.Biol. 267 640 660 1997 JMOBAK UK 0022-2836 0070 ? 9126843 10.1006/jmbi.1996.0864 1 'Crystallization and Preliminary Characterization of Crystals of D-2-Hydroxyisocaproate Dehydrogenase from Lactobacillus Casei' J.Mol.Biol. 240 400 ? 1994 JMOBAK UK 0022-2836 0070 ? ? ? 2 ;Roentgenkristallographische Untersuchungen an Drei Mikrobiellen Enzymen: D-2-Hydroxyisocaproat-Dehydrogenase Aus Lactobacillus Casei L-2-Hydroxyisocaproat-Dehydrogenase Aus Lactobacillus Confusus Alkalische Protease Aus Bacillus Alcalophilus/Variante Q59R ; Thesis ? ? ? 1993 ? GW ? 2131 'Braunschweig : Technische Universitat Braunschweig (Thesis)' ? ? 3 'Potential of R-2-Hydroxyisocaproate Dehydrogenase from Lactobacillus Casei for Stereospecific Reductions' ENZYME.MICROB.TECHNOL. 14 28 ? 1992 ? US 0141-0229 ? ? ? ? 4 'Cloning, Sequencing and Expression in Escherichia Coli of the D-2-Hydroxyisocaproate Dehydrogenase Gene of Lactobacillus Casei' Gene 78 47 ? 1989 GENED6 NE 0378-1119 0861 ? ? ? 5 'Crystallization and Molecular Properties of D-2-Hydroxyisocaproate Dehydrogenase from Lactobacillus Casei' 'Fems Microbiol.Lett.' 43 263 ? 1987 FMLED7 NE 0378-1097 2102 ? ? ? 6 ;D-2-Hydroxyisocaproate Dehydrogenase from Lactobacillus Casei. A New Enzyme Suitable for Stereospecific Reduction of 2-Ketocarboxylic Acids ; Appl.Microbiol.Biotechnol. 21 7 ? 1985 AMBIDG GW 0175-7598 0786 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dengler, U.' 1 ? primary 'Niefind, K.' 2 ? primary 'Kiess, M.' 3 ? primary 'Schomburg, D.' 4 ? 1 'Niefind, K.' 5 ? 1 'Hecht, H.J.' 6 ? 1 'Schomburg, D.' 7 ? 2 'Niefind, K.' 8 ? 3 'Kallwass, H.K.W.' 9 ? 4 'Lerch, H.P.' 10 ? 4 'Blocker, H.' 11 ? 4 'Kallwass, H.' 12 ? 4 'Hoppe, J.' 13 ? 4 'Tsai, H.' 14 ? 4 'Collins, J.' 15 ? 5 'Kallwass, H.' 16 ? 5 'Tsai, H.' 17 ? 5 'Schuette, H.' 18 ? 6 'Hummel, W.' 19 ? 6 'Schuette, H.' 20 ? 6 'Kula, M.R.' 21 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'D-2-HYDROXYISOCAPROATE DEHYDROGENASE' 36929.840 1 1.1.1.- ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 4 non-polymer syn '2-OXO-4-METHYLPENTANOIC ACID' 130.142 1 ? ? ? ? 5 water nat water 18.015 182 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'D-HICDH, R-HICDH, R-2-HYDROXYISOCAPROATE DEHYDROGENASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTD NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVA IKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDT QAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLT KGETSTEVTGPAK ; _entity_poly.pdbx_seq_one_letter_code_can ;MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTD NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVA IKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDT QAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLT KGETSTEVTGPAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 4 '2-OXO-4-METHYLPENTANOIC ACID' COI 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ILE n 1 4 ILE n 1 5 ALA n 1 6 TYR n 1 7 GLY n 1 8 ALA n 1 9 ARG n 1 10 VAL n 1 11 ASP n 1 12 GLU n 1 13 ILE n 1 14 GLN n 1 15 TYR n 1 16 PHE n 1 17 LYS n 1 18 GLN n 1 19 TRP n 1 20 ALA n 1 21 LYS n 1 22 ASP n 1 23 THR n 1 24 GLY n 1 25 ASN n 1 26 THR n 1 27 LEU n 1 28 GLU n 1 29 TYR n 1 30 HIS n 1 31 THR n 1 32 GLU n 1 33 PHE n 1 34 LEU n 1 35 ASP n 1 36 GLU n 1 37 ASN n 1 38 THR n 1 39 VAL n 1 40 GLU n 1 41 TRP n 1 42 ALA n 1 43 LYS n 1 44 GLY n 1 45 PHE n 1 46 ASP n 1 47 GLY n 1 48 ILE n 1 49 ASN n 1 50 SER n 1 51 LEU n 1 52 GLN n 1 53 THR n 1 54 THR n 1 55 PRO n 1 56 TYR n 1 57 ALA n 1 58 ALA n 1 59 GLY n 1 60 VAL n 1 61 PHE n 1 62 GLU n 1 63 LYS n 1 64 MET n 1 65 HIS n 1 66 ALA n 1 67 TYR n 1 68 GLY n 1 69 ILE n 1 70 LYS n 1 71 PHE n 1 72 LEU n 1 73 THR n 1 74 ILE n 1 75 ARG n 1 76 ASN n 1 77 VAL n 1 78 GLY n 1 79 THR n 1 80 ASP n 1 81 ASN n 1 82 ILE n 1 83 ASP n 1 84 MET n 1 85 THR n 1 86 ALA n 1 87 MET n 1 88 LYS n 1 89 GLN n 1 90 TYR n 1 91 GLY n 1 92 ILE n 1 93 ARG n 1 94 LEU n 1 95 SER n 1 96 ASN n 1 97 VAL n 1 98 PRO n 1 99 ALA n 1 100 TYR n 1 101 SER n 1 102 PRO n 1 103 ALA n 1 104 ALA n 1 105 ILE n 1 106 ALA n 1 107 GLU n 1 108 PHE n 1 109 ALA n 1 110 LEU n 1 111 THR n 1 112 ASP n 1 113 THR n 1 114 LEU n 1 115 TYR n 1 116 LEU n 1 117 LEU n 1 118 ARG n 1 119 ASN n 1 120 MET n 1 121 GLY n 1 122 LYS n 1 123 VAL n 1 124 GLN n 1 125 ALA n 1 126 GLN n 1 127 LEU n 1 128 GLN n 1 129 ALA n 1 130 GLY n 1 131 ASP n 1 132 TYR n 1 133 GLU n 1 134 LYS n 1 135 ALA n 1 136 GLY n 1 137 THR n 1 138 PHE n 1 139 ILE n 1 140 GLY n 1 141 LYS n 1 142 GLU n 1 143 LEU n 1 144 GLY n 1 145 GLN n 1 146 GLN n 1 147 THR n 1 148 VAL n 1 149 GLY n 1 150 VAL n 1 151 MET n 1 152 GLY n 1 153 THR n 1 154 GLY n 1 155 HIS n 1 156 ILE n 1 157 GLY n 1 158 GLN n 1 159 VAL n 1 160 ALA n 1 161 ILE n 1 162 LYS n 1 163 LEU n 1 164 PHE n 1 165 LYS n 1 166 GLY n 1 167 PHE n 1 168 GLY n 1 169 ALA n 1 170 LYS n 1 171 VAL n 1 172 ILE n 1 173 ALA n 1 174 TYR n 1 175 ASP n 1 176 PRO n 1 177 TYR n 1 178 PRO n 1 179 MET n 1 180 LYS n 1 181 GLY n 1 182 ASP n 1 183 HIS n 1 184 PRO n 1 185 ASP n 1 186 PHE n 1 187 ASP n 1 188 TYR n 1 189 VAL n 1 190 SER n 1 191 LEU n 1 192 GLU n 1 193 ASP n 1 194 LEU n 1 195 PHE n 1 196 LYS n 1 197 GLN n 1 198 SER n 1 199 ASP n 1 200 VAL n 1 201 ILE n 1 202 ASP n 1 203 LEU n 1 204 HIS n 1 205 VAL n 1 206 PRO n 1 207 GLY n 1 208 ILE n 1 209 GLU n 1 210 GLN n 1 211 ASN n 1 212 THR n 1 213 HIS n 1 214 ILE n 1 215 ILE n 1 216 ASN n 1 217 GLU n 1 218 ALA n 1 219 ALA n 1 220 PHE n 1 221 ASN n 1 222 LEU n 1 223 MET n 1 224 LYS n 1 225 PRO n 1 226 GLY n 1 227 ALA n 1 228 ILE n 1 229 VAL n 1 230 ILE n 1 231 ASN n 1 232 THR n 1 233 ALA n 1 234 ARG n 1 235 PRO n 1 236 ASN n 1 237 LEU n 1 238 ILE n 1 239 ASP n 1 240 THR n 1 241 GLN n 1 242 ALA n 1 243 MET n 1 244 LEU n 1 245 SER n 1 246 ASN n 1 247 LEU n 1 248 LYS n 1 249 SER n 1 250 GLY n 1 251 LYS n 1 252 LEU n 1 253 ALA n 1 254 GLY n 1 255 VAL n 1 256 GLY n 1 257 ILE n 1 258 ASP n 1 259 THR n 1 260 TYR n 1 261 GLU n 1 262 TYR n 1 263 GLU n 1 264 THR n 1 265 GLU n 1 266 ASP n 1 267 LEU n 1 268 LEU n 1 269 ASN n 1 270 LEU n 1 271 ALA n 1 272 LYS n 1 273 HIS n 1 274 GLY n 1 275 SER n 1 276 PHE n 1 277 LYS n 1 278 ASP n 1 279 PRO n 1 280 LEU n 1 281 TRP n 1 282 ASP n 1 283 GLU n 1 284 LEU n 1 285 LEU n 1 286 GLY n 1 287 MET n 1 288 PRO n 1 289 ASN n 1 290 VAL n 1 291 VAL n 1 292 LEU n 1 293 SER n 1 294 PRO n 1 295 HIS n 1 296 ILE n 1 297 ALA n 1 298 TYR n 1 299 TYR n 1 300 THR n 1 301 GLU n 1 302 THR n 1 303 ALA n 1 304 VAL n 1 305 HIS n 1 306 ASN n 1 307 MET n 1 308 VAL n 1 309 TYR n 1 310 PHE n 1 311 SER n 1 312 LEU n 1 313 GLN n 1 314 HIS n 1 315 LEU n 1 316 VAL n 1 317 ASP n 1 318 PHE n 1 319 LEU n 1 320 THR n 1 321 LYS n 1 322 GLY n 1 323 GLU n 1 324 THR n 1 325 SER n 1 326 THR n 1 327 GLU n 1 328 VAL n 1 329 THR n 1 330 GLY n 1 331 PRO n 1 332 ALA n 1 333 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lactobacillus _entity_src_gen.pdbx_gene_src_gene POTENTIAL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactobacillus casei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1582 _entity_src_gen.pdbx_gene_src_variant 'SSP. PSEUDOPLANTARUM' _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PJLA601 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 COI non-polymer . '2-OXO-4-METHYLPENTANOIC ACID' 'alpha-ketoisocaproic acid' 'C6 H10 O3' 130.142 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 HIS 30 30 30 HIS HIS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 ASN 96 96 96 ASN ASN A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 PHE 138 138 138 PHE PHE A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 GLN 146 146 146 GLN GLN A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 MET 151 151 151 MET MET A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 TYR 174 174 174 TYR TYR A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 PRO 176 176 176 PRO PRO A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 MET 179 179 179 MET MET A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 HIS 183 183 183 HIS HIS A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 ASP 185 185 185 ASP ASP A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 VAL 189 189 189 VAL VAL A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 GLN 197 197 197 GLN GLN A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 HIS 204 204 204 HIS HIS A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 GLN 210 210 210 GLN GLN A . n A 1 211 ASN 211 211 211 ASN ASN A . n A 1 212 THR 212 212 212 THR THR A . n A 1 213 HIS 213 213 213 HIS HIS A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 ILE 215 215 215 ILE ILE A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 ALA 219 219 219 ALA ALA A . n A 1 220 PHE 220 220 220 PHE PHE A . n A 1 221 ASN 221 221 221 ASN ASN A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 MET 223 223 223 MET MET A . n A 1 224 LYS 224 224 224 LYS LYS A . n A 1 225 PRO 225 225 225 PRO PRO A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 ALA 227 227 227 ALA ALA A . n A 1 228 ILE 228 228 228 ILE ILE A . n A 1 229 VAL 229 229 229 VAL VAL A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 PRO 235 235 235 PRO PRO A . n A 1 236 ASN 236 236 236 ASN ASN A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 ASP 239 239 239 ASP ASP A . n A 1 240 THR 240 240 240 THR THR A . n A 1 241 GLN 241 241 241 GLN GLN A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 MET 243 243 243 MET MET A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 ASN 246 246 246 ASN ASN A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 SER 249 249 249 SER SER A . n A 1 250 GLY 250 250 250 GLY GLY A . n A 1 251 LYS 251 251 251 LYS LYS A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ASP 258 258 258 ASP ASP A . n A 1 259 THR 259 259 259 THR THR A . n A 1 260 TYR 260 260 260 TYR TYR A . n A 1 261 GLU 261 261 261 GLU GLU A . n A 1 262 TYR 262 262 262 TYR TYR A . n A 1 263 GLU 263 263 263 GLU GLU A . n A 1 264 THR 264 264 264 THR THR A . n A 1 265 GLU 265 265 265 GLU GLU A . n A 1 266 ASP 266 266 266 ASP ASP A . n A 1 267 LEU 267 267 267 LEU LEU A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 ASN 269 269 269 ASN ASN A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 HIS 273 273 273 HIS HIS A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 PHE 276 276 276 PHE PHE A . n A 1 277 LYS 277 277 277 LYS LYS A . n A 1 278 ASP 278 278 278 ASP ASP A . n A 1 279 PRO 279 279 279 PRO PRO A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 TRP 281 281 281 TRP TRP A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 GLU 283 283 283 GLU GLU A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 MET 287 287 287 MET MET A . n A 1 288 PRO 288 288 288 PRO PRO A . n A 1 289 ASN 289 289 289 ASN ASN A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 LEU 292 292 292 LEU LEU A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 HIS 295 295 295 HIS HIS A . n A 1 296 ILE 296 296 296 ILE ILE A . n A 1 297 ALA 297 297 297 ALA ALA A . n A 1 298 TYR 298 298 298 TYR TYR A . n A 1 299 TYR 299 299 299 TYR TYR A . n A 1 300 THR 300 300 300 THR THR A . n A 1 301 GLU 301 301 301 GLU GLU A . n A 1 302 THR 302 302 302 THR THR A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 VAL 304 304 304 VAL VAL A . n A 1 305 HIS 305 305 305 HIS HIS A . n A 1 306 ASN 306 306 306 ASN ASN A . n A 1 307 MET 307 307 307 MET MET A . n A 1 308 VAL 308 308 308 VAL VAL A . n A 1 309 TYR 309 309 309 TYR TYR A . n A 1 310 PHE 310 310 310 PHE PHE A . n A 1 311 SER 311 311 311 SER SER A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 GLN 313 313 313 GLN GLN A . n A 1 314 HIS 314 314 314 HIS HIS A . n A 1 315 LEU 315 315 315 LEU LEU A . n A 1 316 VAL 316 316 316 VAL VAL A . n A 1 317 ASP 317 317 317 ASP ASP A . n A 1 318 PHE 318 318 318 PHE PHE A . n A 1 319 LEU 319 319 319 LEU LEU A . n A 1 320 THR 320 320 320 THR THR A . n A 1 321 LYS 321 321 321 LYS LYS A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 THR 324 324 324 THR THR A . n A 1 325 SER 325 325 325 SER SER A . n A 1 326 THR 326 326 326 THR THR A . n A 1 327 GLU 327 327 327 GLU GLU A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 THR 329 329 329 THR THR A . n A 1 330 GLY 330 330 330 GLY GLY A . n A 1 331 PRO 331 331 ? ? ? A . n A 1 332 ALA 332 332 ? ? ? A . n A 1 333 LYS 333 333 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 401 338 SO4 SO4 A . C 2 SO4 1 402 339 SO4 SO4 A . D 3 NAD 1 403 336 NAD NAD A . E 4 COI 1 404 337 COI COI A . F 5 HOH 1 501 340 HOH HOH A . F 5 HOH 2 502 341 HOH HOH A . F 5 HOH 3 503 342 HOH HOH A . F 5 HOH 4 504 343 HOH HOH A . F 5 HOH 5 505 344 HOH HOH A . F 5 HOH 6 506 345 HOH HOH A . F 5 HOH 7 507 346 HOH HOH A . F 5 HOH 8 508 347 HOH HOH A . F 5 HOH 9 509 348 HOH HOH A . F 5 HOH 10 510 349 HOH HOH A . F 5 HOH 11 511 350 HOH HOH A . F 5 HOH 12 512 351 HOH HOH A . F 5 HOH 13 513 352 HOH HOH A . F 5 HOH 14 514 353 HOH HOH A . F 5 HOH 15 515 354 HOH HOH A . F 5 HOH 16 516 355 HOH HOH A . F 5 HOH 17 517 356 HOH HOH A . F 5 HOH 18 518 357 HOH HOH A . F 5 HOH 19 519 358 HOH HOH A . F 5 HOH 20 520 359 HOH HOH A . F 5 HOH 21 521 360 HOH HOH A . F 5 HOH 22 522 361 HOH HOH A . F 5 HOH 23 523 362 HOH HOH A . F 5 HOH 24 524 363 HOH HOH A . F 5 HOH 25 525 364 HOH HOH A . F 5 HOH 26 526 365 HOH HOH A . F 5 HOH 27 527 366 HOH HOH A . F 5 HOH 28 528 367 HOH HOH A . F 5 HOH 29 529 368 HOH HOH A . F 5 HOH 30 530 369 HOH HOH A . F 5 HOH 31 531 370 HOH HOH A . F 5 HOH 32 532 371 HOH HOH A . F 5 HOH 33 533 372 HOH HOH A . F 5 HOH 34 534 373 HOH HOH A . F 5 HOH 35 535 374 HOH HOH A . F 5 HOH 36 536 375 HOH HOH A . F 5 HOH 37 537 376 HOH HOH A . F 5 HOH 38 538 377 HOH HOH A . F 5 HOH 39 539 378 HOH HOH A . F 5 HOH 40 540 379 HOH HOH A . F 5 HOH 41 541 380 HOH HOH A . F 5 HOH 42 542 381 HOH HOH A . F 5 HOH 43 543 382 HOH HOH A . F 5 HOH 44 544 383 HOH HOH A . F 5 HOH 45 545 384 HOH HOH A . F 5 HOH 46 546 385 HOH HOH A . F 5 HOH 47 547 386 HOH HOH A . F 5 HOH 48 548 387 HOH HOH A . F 5 HOH 49 549 388 HOH HOH A . F 5 HOH 50 550 389 HOH HOH A . F 5 HOH 51 551 390 HOH HOH A . F 5 HOH 52 552 391 HOH HOH A . F 5 HOH 53 553 392 HOH HOH A . F 5 HOH 54 554 393 HOH HOH A . F 5 HOH 55 555 394 HOH HOH A . F 5 HOH 56 556 395 HOH HOH A . F 5 HOH 57 557 396 HOH HOH A . F 5 HOH 58 558 397 HOH HOH A . F 5 HOH 59 559 398 HOH HOH A . F 5 HOH 60 560 399 HOH HOH A . F 5 HOH 61 561 400 HOH HOH A . F 5 HOH 62 562 401 HOH HOH A . F 5 HOH 63 563 402 HOH HOH A . F 5 HOH 64 564 403 HOH HOH A . F 5 HOH 65 565 404 HOH HOH A . F 5 HOH 66 566 405 HOH HOH A . F 5 HOH 67 567 406 HOH HOH A . F 5 HOH 68 568 407 HOH HOH A . F 5 HOH 69 569 408 HOH HOH A . F 5 HOH 70 570 409 HOH HOH A . F 5 HOH 71 571 410 HOH HOH A . F 5 HOH 72 572 411 HOH HOH A . F 5 HOH 73 573 412 HOH HOH A . F 5 HOH 74 574 413 HOH HOH A . F 5 HOH 75 575 414 HOH HOH A . F 5 HOH 76 576 415 HOH HOH A . F 5 HOH 77 577 416 HOH HOH A . F 5 HOH 78 578 417 HOH HOH A . F 5 HOH 79 579 418 HOH HOH A . F 5 HOH 80 580 419 HOH HOH A . F 5 HOH 81 581 420 HOH HOH A . F 5 HOH 82 582 421 HOH HOH A . F 5 HOH 83 583 422 HOH HOH A . F 5 HOH 84 584 423 HOH HOH A . F 5 HOH 85 585 424 HOH HOH A . F 5 HOH 86 586 425 HOH HOH A . F 5 HOH 87 587 426 HOH HOH A . F 5 HOH 88 588 427 HOH HOH A . F 5 HOH 89 589 428 HOH HOH A . F 5 HOH 90 590 429 HOH HOH A . F 5 HOH 91 591 430 HOH HOH A . F 5 HOH 92 592 431 HOH HOH A . F 5 HOH 93 593 432 HOH HOH A . F 5 HOH 94 594 433 HOH HOH A . F 5 HOH 95 595 434 HOH HOH A . F 5 HOH 96 596 435 HOH HOH A . F 5 HOH 97 597 436 HOH HOH A . F 5 HOH 98 598 437 HOH HOH A . F 5 HOH 99 599 438 HOH HOH A . F 5 HOH 100 600 439 HOH HOH A . F 5 HOH 101 601 440 HOH HOH A . F 5 HOH 102 602 441 HOH HOH A . F 5 HOH 103 603 442 HOH HOH A . F 5 HOH 104 604 443 HOH HOH A . F 5 HOH 105 605 444 HOH HOH A . F 5 HOH 106 606 445 HOH HOH A . F 5 HOH 107 607 446 HOH HOH A . F 5 HOH 108 608 447 HOH HOH A . F 5 HOH 109 609 448 HOH HOH A . F 5 HOH 110 610 449 HOH HOH A . F 5 HOH 111 611 450 HOH HOH A . F 5 HOH 112 612 451 HOH HOH A . F 5 HOH 113 613 452 HOH HOH A . F 5 HOH 114 614 453 HOH HOH A . F 5 HOH 115 615 454 HOH HOH A . F 5 HOH 116 616 455 HOH HOH A . F 5 HOH 117 617 456 HOH HOH A . F 5 HOH 118 618 457 HOH HOH A . F 5 HOH 119 619 458 HOH HOH A . F 5 HOH 120 620 459 HOH HOH A . F 5 HOH 121 621 460 HOH HOH A . F 5 HOH 122 622 461 HOH HOH A . F 5 HOH 123 623 462 HOH HOH A . F 5 HOH 124 624 463 HOH HOH A . F 5 HOH 125 625 464 HOH HOH A . F 5 HOH 126 626 465 HOH HOH A . F 5 HOH 127 627 466 HOH HOH A . F 5 HOH 128 628 467 HOH HOH A . F 5 HOH 129 629 468 HOH HOH A . F 5 HOH 130 630 469 HOH HOH A . F 5 HOH 131 631 470 HOH HOH A . F 5 HOH 132 632 471 HOH HOH A . F 5 HOH 133 633 472 HOH HOH A . F 5 HOH 134 634 473 HOH HOH A . F 5 HOH 135 635 474 HOH HOH A . F 5 HOH 136 636 475 HOH HOH A . F 5 HOH 137 637 476 HOH HOH A . F 5 HOH 138 638 477 HOH HOH A . F 5 HOH 139 639 478 HOH HOH A . F 5 HOH 140 640 479 HOH HOH A . F 5 HOH 141 641 480 HOH HOH A . F 5 HOH 142 642 481 HOH HOH A . F 5 HOH 143 643 482 HOH HOH A . F 5 HOH 144 644 483 HOH HOH A . F 5 HOH 145 645 484 HOH HOH A . F 5 HOH 146 646 485 HOH HOH A . F 5 HOH 147 647 486 HOH HOH A . F 5 HOH 148 648 487 HOH HOH A . F 5 HOH 149 649 488 HOH HOH A . F 5 HOH 150 650 489 HOH HOH A . F 5 HOH 151 651 490 HOH HOH A . F 5 HOH 152 652 491 HOH HOH A . F 5 HOH 153 653 492 HOH HOH A . F 5 HOH 154 654 493 HOH HOH A . F 5 HOH 155 655 494 HOH HOH A . F 5 HOH 156 656 495 HOH HOH A . F 5 HOH 157 657 496 HOH HOH A . F 5 HOH 158 658 497 HOH HOH A . F 5 HOH 159 659 498 HOH HOH A . F 5 HOH 160 660 499 HOH HOH A . F 5 HOH 161 661 500 HOH HOH A . F 5 HOH 162 662 501 HOH HOH A . F 5 HOH 163 663 502 HOH HOH A . F 5 HOH 164 664 503 HOH HOH A . F 5 HOH 165 665 504 HOH HOH A . F 5 HOH 166 666 505 HOH HOH A . F 5 HOH 167 667 506 HOH HOH A . F 5 HOH 168 668 507 HOH HOH A . F 5 HOH 169 669 508 HOH HOH A . F 5 HOH 170 670 509 HOH HOH A . F 5 HOH 171 671 510 HOH HOH A . F 5 HOH 172 672 511 HOH HOH A . F 5 HOH 173 673 512 HOH HOH A . F 5 HOH 174 674 513 HOH HOH A . F 5 HOH 175 675 514 HOH HOH A . F 5 HOH 176 676 515 HOH HOH A . F 5 HOH 177 677 516 HOH HOH A . F 5 HOH 178 678 517 HOH HOH A . F 5 HOH 179 679 518 HOH HOH A . F 5 HOH 180 680 519 HOH HOH A . F 5 HOH 181 681 520 HOH HOH A . F 5 HOH 182 682 521 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 2 ? CE ? A LYS 2 CE 2 1 Y 0 A LYS 2 ? NZ ? A LYS 2 NZ 3 1 Y 0 A LYS 21 ? CE ? A LYS 21 CE 4 1 Y 0 A LYS 21 ? NZ ? A LYS 21 NZ 5 1 Y 0 A LYS 43 ? CG ? A LYS 43 CG 6 1 Y 0 A LYS 43 ? CD ? A LYS 43 CD 7 1 Y 0 A LYS 43 ? CE ? A LYS 43 CE 8 1 Y 0 A LYS 43 ? NZ ? A LYS 43 NZ 9 1 Y 0 A LYS 70 ? CG ? A LYS 70 CG 10 1 Y 0 A LYS 70 ? CD ? A LYS 70 CD 11 1 Y 0 A LYS 70 ? CE ? A LYS 70 CE 12 1 Y 0 A LYS 70 ? NZ ? A LYS 70 NZ 13 1 Y 0 A LYS 88 ? CG ? A LYS 88 CG 14 1 Y 0 A LYS 88 ? CD ? A LYS 88 CD 15 1 Y 0 A LYS 88 ? CE ? A LYS 88 CE 16 1 Y 0 A LYS 88 ? NZ ? A LYS 88 NZ 17 1 Y 0 A LYS 180 ? CD ? A LYS 180 CD 18 1 Y 0 A LYS 180 ? CE ? A LYS 180 CE 19 1 Y 0 A LYS 180 ? NZ ? A LYS 180 NZ 20 1 Y 0 A GLU 209 ? CG ? A GLU 209 CG 21 1 Y 0 A GLU 209 ? CD ? A GLU 209 CD 22 1 Y 0 A GLU 209 ? OE1 ? A GLU 209 OE1 23 1 Y 0 A GLU 209 ? OE2 ? A GLU 209 OE2 24 1 Y 0 A LYS 321 ? CD ? A LYS 321 CD 25 1 Y 0 A LYS 321 ? CE ? A LYS 321 CE 26 1 Y 0 A LYS 321 ? NZ ? A LYS 321 NZ 27 1 Y 0 A GLU 323 ? CG ? A GLU 323 CG 28 1 Y 0 A GLU 323 ? CD ? A GLU 323 CD 29 1 Y 0 A GLU 323 ? OE1 ? A GLU 323 OE1 30 1 Y 0 A GLU 323 ? OE2 ? A GLU 323 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 MOSFLM 'data reduction' . ? 3 CCP4 'data scaling' '(AGROVATA' ? 4 ROTAVATA 'data scaling' . ? 5 X-PLOR phasing 3.1 ? 6 # _cell.entry_id 1DXY _cell.length_a 134.100 _cell.length_b 134.100 _cell.length_c 125.100 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DXY _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 # _exptl.entry_id 1DXY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.4 _exptl_crystal.density_percent_sol 72.0 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;1.9 M AMMONIUM SULFATE, 50 MM CITRATE/PHOSPHATE BUFFER, 30 MM NAD+, 60 MM 4-METHYL-2-OXOPENTANOATE, PH 7.0, 277 K; ENZYME CONCENTRATION 10 MG/ML. ; # _diffrn.id 1 _diffrn.ambient_temp 277 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 1994-08-01 _diffrn_detector.details 'MIRROR OPTICS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MPG/DESY, HAMBURG BEAMLINE BW6' _diffrn_source.pdbx_synchrotron_site 'MPG/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW6 _diffrn_source.pdbx_wavelength 1.1 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DXY _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 12.1 _reflns.d_resolution_high 1.86 _reflns.number_obs 53838 _reflns.number_all ? _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0890000 _reflns.pdbx_netI_over_sigmaI 22.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.8 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.86 _reflns_shell.d_res_low 2.0 _reflns_shell.percent_possible_all 86.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.4800000 _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1DXY _refine.ls_number_reflns_obs 53838 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 12.1 _refine.ls_d_res_high 1.86 _refine.ls_percent_reflns_obs 96.5 _refine.ls_R_factor_obs 0.1960000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1960000 _refine.ls_R_factor_R_free 0.2170000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 31.02 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'BACKBONE AND C-BETA ATOMS OF D-GLYCERATE DEHYDROGENASE (PDB ENTRY 1GDH)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1DXY _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.28 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2580 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 63 _refine_hist.number_atoms_solvent 182 _refine_hist.number_atoms_total 2825 _refine_hist.d_res_high 1.86 _refine_hist.d_res_low 12.1 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.73 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.12 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.25 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1DXY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DXY _struct.title 'STRUCTURE OF D-2-HYDROXYISOCAPROATE DEHYDROGENASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DXY _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'D-2-HYDROXYCARBOXYLATE DEHYDROGENASE, D-LACTATE DEHYDROGENASE, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DHD2_LACPA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P17584 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MKIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTD NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVA IKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDT QAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLT KGETSTEVTGPAK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1DXY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 333 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17584 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 333 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 333 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA,PQS hexameric 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8770 ? 1 MORE -103 ? 1 'SSA (A^2)' 26670 ? 2 'ABSA (A^2)' 34670 ? 2 MORE -342 ? 2 'SSA (A^2)' 71660 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E,F 2 1,3,4,5,6,2 A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_554 x,x-y,-z-1/2 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -62.5500000000 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 134.1000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 67.0500000000 -0.8660254038 -0.5000000000 0.0000000000 116.1340066475 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 10_664 -y+1,-x+1,-z-1/2 0.5000000000 -0.8660254038 0.0000000000 67.0500000000 -0.8660254038 -0.5000000000 0.0000000000 116.1340066475 0.0000000000 0.0000000000 -1.0000000000 -62.5500000000 6 'crystal symmetry operation' 11_654 -x+y+1,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 134.1000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -62.5500000000 # _struct_biol.id 1 _struct_biol.details ;D-HICDH IS A DIMER OF IDENTICAL SUBUNITS, WHICH OCCUPIES A SPECIAL POSITION IN THE INVESTIGATED CRYSTALS. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 10 ? THR A 23 ? VAL A 10 THR A 23 5 ? 14 HELX_P HELX_P2 2 THR A 38 ? ALA A 42 ? THR A 38 ALA A 42 5 ? 5 HELX_P HELX_P3 3 ALA A 58 ? TYR A 67 ? ALA A 58 TYR A 67 1 ? 10 HELX_P HELX_P4 4 MET A 84 ? GLN A 89 ? MET A 84 GLN A 89 1 ? 6 HELX_P HELX_P5 5 PRO A 102 ? LEU A 117 ? PRO A 102 LEU A 117 1 ? 16 HELX_P HELX_P6 6 MET A 120 ? GLN A 128 ? MET A 120 GLN A 128 1 ? 9 HELX_P HELX_P7 7 TYR A 132 ? GLY A 136 ? TYR A 132 GLY A 136 1 ? 5 HELX_P HELX_P8 8 LEU A 143 ? GLN A 145 ? LEU A 143 GLN A 145 5 ? 3 HELX_P HELX_P9 9 HIS A 155 ? PHE A 167 ? HIS A 155 PHE A 167 1 ? 13 HELX_P HELX_P10 10 LEU A 191 ? GLN A 197 ? LEU A 191 GLN A 197 1 ? 7 HELX_P HELX_P11 11 GLU A 209 ? ASN A 211 ? GLU A 209 ASN A 211 5 ? 3 HELX_P HELX_P12 12 GLU A 217 ? LEU A 222 ? GLU A 217 LEU A 222 1 ? 6 HELX_P HELX_P13 13 THR A 240 ? LYS A 248 ? THR A 240 LYS A 248 1 ? 9 HELX_P HELX_P14 14 GLU A 263 ? HIS A 273 ? GLU A 263 HIS A 273 1 ? 11 HELX_P HELX_P15 15 PRO A 279 ? LEU A 285 ? PRO A 279 LEU A 285 1 ? 7 HELX_P HELX_P16 16 GLU A 301 ? LYS A 321 ? GLU A 301 LYS A 321 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 26 ? TYR A 29 ? THR A 26 TYR A 29 A 2 LYS A 2 ? ALA A 5 ? LYS A 2 ALA A 5 A 3 GLY A 47 ? SER A 50 ? GLY A 47 SER A 50 A 4 PHE A 71 ? ILE A 74 ? PHE A 71 ILE A 74 A 5 ARG A 93 ? SER A 95 ? ARG A 93 SER A 95 B 1 LYS A 170 ? TYR A 174 ? LYS A 170 TYR A 174 B 2 THR A 147 ? MET A 151 ? THR A 147 MET A 151 B 3 VAL A 200 ? LEU A 203 ? VAL A 200 LEU A 203 B 4 ALA A 227 ? ASN A 231 ? ALA A 227 ASN A 231 B 5 LEU A 252 ? ILE A 257 ? LEU A 252 ILE A 257 B 6 VAL A 290 ? LEU A 292 ? VAL A 290 LEU A 292 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 26 ? O THR A 26 N ILE A 3 ? N ILE A 3 A 2 3 O ILE A 4 ? O ILE A 4 N GLY A 47 ? N GLY A 47 A 3 4 O ILE A 48 ? O ILE A 48 N THR A 73 ? N THR A 73 A 4 5 O LEU A 72 ? O LEU A 72 N ARG A 93 ? N ARG A 93 B 1 2 O LYS A 170 ? O LYS A 170 N VAL A 148 ? N VAL A 148 B 2 3 O GLY A 149 ? O GLY A 149 N VAL A 200 ? N VAL A 200 B 3 4 O ILE A 201 ? O ILE A 201 N ILE A 228 ? N ILE A 228 B 4 5 O ALA A 227 ? O ALA A 227 N ALA A 253 ? N ALA A 253 B 5 6 O VAL A 255 ? O VAL A 255 N VAL A 291 ? N VAL A 291 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CAT Unknown ? ? ? ? 7 'ACTIVE SITE.' AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 338' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 339' AC3 Software ? ? ? ? 26 'BINDING SITE FOR RESIDUE NAD A 336' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE COI A 337' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CAT 7 VAL A 77 ? VAL A 77 . ? 1_555 ? 2 CAT 7 GLY A 78 ? GLY A 78 . ? 1_555 ? 3 CAT 7 TYR A 100 ? TYR A 100 . ? 1_555 ? 4 CAT 7 THR A 232 ? THR A 232 . ? 1_555 ? 5 CAT 7 ARG A 234 ? ARG A 234 . ? 1_555 ? 6 CAT 7 GLU A 263 ? GLU A 263 . ? 1_555 ? 7 CAT 7 HIS A 295 ? HIS A 295 . ? 1_555 ? 8 AC1 6 ASN A 76 ? ASN A 76 . ? 1_555 ? 9 AC1 6 VAL A 77 ? VAL A 77 . ? 1_555 ? 10 AC1 6 GLY A 78 ? GLY A 78 . ? 1_555 ? 11 AC1 6 TYR A 100 ? TYR A 100 . ? 1_555 ? 12 AC1 6 ARG A 234 ? ARG A 234 . ? 1_555 ? 13 AC1 6 COI E . ? COI A 404 . ? 1_555 ? 14 AC2 6 PRO A 98 ? PRO A 98 . ? 1_555 ? 15 AC2 6 ALA A 99 ? ALA A 99 . ? 1_555 ? 16 AC2 6 PHE A 310 ? PHE A 310 . ? 1_555 ? 17 AC2 6 HIS A 314 ? HIS A 314 . ? 1_555 ? 18 AC2 6 THR A 326 ? THR A 326 . ? 1_555 ? 19 AC2 6 HOH F . ? HOH A 653 . ? 1_555 ? 20 AC3 26 TYR A 100 ? TYR A 100 . ? 1_555 ? 21 AC3 26 GLY A 152 ? GLY A 152 . ? 1_555 ? 22 AC3 26 GLY A 154 ? GLY A 154 . ? 1_555 ? 23 AC3 26 HIS A 155 ? HIS A 155 . ? 1_555 ? 24 AC3 26 ILE A 156 ? ILE A 156 . ? 1_555 ? 25 AC3 26 TYR A 174 ? TYR A 174 . ? 1_555 ? 26 AC3 26 ASP A 175 ? ASP A 175 . ? 1_555 ? 27 AC3 26 PRO A 176 ? PRO A 176 . ? 1_555 ? 28 AC3 26 HIS A 204 ? HIS A 204 . ? 1_555 ? 29 AC3 26 VAL A 205 ? VAL A 205 . ? 1_555 ? 30 AC3 26 PRO A 206 ? PRO A 206 . ? 1_555 ? 31 AC3 26 ASN A 211 ? ASN A 211 . ? 1_555 ? 32 AC3 26 ILE A 214 ? ILE A 214 . ? 1_555 ? 33 AC3 26 THR A 232 ? THR A 232 . ? 1_555 ? 34 AC3 26 ALA A 233 ? ALA A 233 . ? 1_555 ? 35 AC3 26 ARG A 234 ? ARG A 234 . ? 1_555 ? 36 AC3 26 ASP A 258 ? ASP A 258 . ? 1_555 ? 37 AC3 26 THR A 259 ? THR A 259 . ? 1_555 ? 38 AC3 26 HIS A 295 ? HIS A 295 . ? 1_555 ? 39 AC3 26 TYR A 298 ? TYR A 298 . ? 1_555 ? 40 AC3 26 COI E . ? COI A 404 . ? 1_555 ? 41 AC3 26 HOH F . ? HOH A 502 . ? 1_555 ? 42 AC3 26 HOH F . ? HOH A 504 . ? 1_555 ? 43 AC3 26 HOH F . ? HOH A 580 . ? 1_555 ? 44 AC3 26 HOH F . ? HOH A 581 . ? 1_555 ? 45 AC3 26 HOH F . ? HOH A 629 . ? 1_555 ? 46 AC4 7 VAL A 77 ? VAL A 77 . ? 1_555 ? 47 AC4 7 TYR A 100 ? TYR A 100 . ? 1_555 ? 48 AC4 7 ARG A 234 ? ARG A 234 . ? 1_555 ? 49 AC4 7 HIS A 295 ? HIS A 295 . ? 1_555 ? 50 AC4 7 MET A 307 ? MET A 307 . ? 1_555 ? 51 AC4 7 NAD D . ? NAD A 403 . ? 1_555 ? 52 AC4 7 SO4 B . ? SO4 A 401 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 76 ? ? -115.43 -166.41 2 1 ALA A 99 ? ? -140.42 59.92 3 1 SER A 101 ? ? -165.13 88.51 4 1 THR A 153 ? ? -109.38 46.33 5 1 HIS A 183 ? ? -163.66 83.59 6 1 HIS A 204 ? ? -141.87 47.73 7 1 ASN A 216 ? ? -124.76 -169.56 8 1 ALA A 233 ? ? -89.63 -83.74 9 1 TYR A 299 ? ? -68.55 72.51 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 543 ? F HOH . 2 1 A HOH 545 ? F HOH . # _pdbx_entry_details.entry_id 1DXY _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;2-OXOISOCAPROATE (OIC 337) AND A SULFATE ION (SO4 338) ARE MUTUALLY EXCLUSIVELY BOUND IN THE ACTIVE SITE. THE OCCUPANCY FACTORS OF BOTH LIGANDS WERE SET TO 0.5, WHILE DIFFERENCES IN OCCUPATION WERE SIMULATED BY TEMPERATURE FACTOR REFINEMENT. ; _pdbx_entry_details.sequence_details ;A CONTACT IS OBSERVED BETWEEN THE SIDE CHAINS OF ASP 266 AND ASP 278. CHEMICAL PROTEIN SEQUENCING CONFIRMED THESE RESIDUES TO BE ASPARTATES. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 331 ? A PRO 331 2 1 Y 1 A ALA 332 ? A ALA 332 3 1 Y 1 A LYS 333 ? A LYS 333 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 COI C1 C N N 74 COI O1 O N N 75 COI O2 O N N 76 COI C2 C N N 77 COI O3 O N N 78 COI C3 C N N 79 COI C4 C N N 80 COI C5 C N N 81 COI C6 C N N 82 COI HO2 H N N 83 COI H31 H N N 84 COI H32 H N N 85 COI H4 H N N 86 COI H51 H N N 87 COI H52 H N N 88 COI H53 H N N 89 COI H61 H N N 90 COI H62 H N N 91 COI H63 H N N 92 GLN N N N N 93 GLN CA C N S 94 GLN C C N N 95 GLN O O N N 96 GLN CB C N N 97 GLN CG C N N 98 GLN CD C N N 99 GLN OE1 O N N 100 GLN NE2 N N N 101 GLN OXT O N N 102 GLN H H N N 103 GLN H2 H N N 104 GLN HA H N N 105 GLN HB2 H N N 106 GLN HB3 H N N 107 GLN HG2 H N N 108 GLN HG3 H N N 109 GLN HE21 H N N 110 GLN HE22 H N N 111 GLN HXT H N N 112 GLU N N N N 113 GLU CA C N S 114 GLU C C N N 115 GLU O O N N 116 GLU CB C N N 117 GLU CG C N N 118 GLU CD C N N 119 GLU OE1 O N N 120 GLU OE2 O N N 121 GLU OXT O N N 122 GLU H H N N 123 GLU H2 H N N 124 GLU HA H N N 125 GLU HB2 H N N 126 GLU HB3 H N N 127 GLU HG2 H N N 128 GLU HG3 H N N 129 GLU HE2 H N N 130 GLU HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 HIS N N N N 142 HIS CA C N S 143 HIS C C N N 144 HIS O O N N 145 HIS CB C N N 146 HIS CG C Y N 147 HIS ND1 N Y N 148 HIS CD2 C Y N 149 HIS CE1 C Y N 150 HIS NE2 N Y N 151 HIS OXT O N N 152 HIS H H N N 153 HIS H2 H N N 154 HIS HA H N N 155 HIS HB2 H N N 156 HIS HB3 H N N 157 HIS HD1 H N N 158 HIS HD2 H N N 159 HIS HE1 H N N 160 HIS HE2 H N N 161 HIS HXT H N N 162 HOH O O N N 163 HOH H1 H N N 164 HOH H2 H N N 165 ILE N N N N 166 ILE CA C N S 167 ILE C C N N 168 ILE O O N N 169 ILE CB C N S 170 ILE CG1 C N N 171 ILE CG2 C N N 172 ILE CD1 C N N 173 ILE OXT O N N 174 ILE H H N N 175 ILE H2 H N N 176 ILE HA H N N 177 ILE HB H N N 178 ILE HG12 H N N 179 ILE HG13 H N N 180 ILE HG21 H N N 181 ILE HG22 H N N 182 ILE HG23 H N N 183 ILE HD11 H N N 184 ILE HD12 H N N 185 ILE HD13 H N N 186 ILE HXT H N N 187 LEU N N N N 188 LEU CA C N S 189 LEU C C N N 190 LEU O O N N 191 LEU CB C N N 192 LEU CG C N N 193 LEU CD1 C N N 194 LEU CD2 C N N 195 LEU OXT O N N 196 LEU H H N N 197 LEU H2 H N N 198 LEU HA H N N 199 LEU HB2 H N N 200 LEU HB3 H N N 201 LEU HG H N N 202 LEU HD11 H N N 203 LEU HD12 H N N 204 LEU HD13 H N N 205 LEU HD21 H N N 206 LEU HD22 H N N 207 LEU HD23 H N N 208 LEU HXT H N N 209 LYS N N N N 210 LYS CA C N S 211 LYS C C N N 212 LYS O O N N 213 LYS CB C N N 214 LYS CG C N N 215 LYS CD C N N 216 LYS CE C N N 217 LYS NZ N N N 218 LYS OXT O N N 219 LYS H H N N 220 LYS H2 H N N 221 LYS HA H N N 222 LYS HB2 H N N 223 LYS HB3 H N N 224 LYS HG2 H N N 225 LYS HG3 H N N 226 LYS HD2 H N N 227 LYS HD3 H N N 228 LYS HE2 H N N 229 LYS HE3 H N N 230 LYS HZ1 H N N 231 LYS HZ2 H N N 232 LYS HZ3 H N N 233 LYS HXT H N N 234 MET N N N N 235 MET CA C N S 236 MET C C N N 237 MET O O N N 238 MET CB C N N 239 MET CG C N N 240 MET SD S N N 241 MET CE C N N 242 MET OXT O N N 243 MET H H N N 244 MET H2 H N N 245 MET HA H N N 246 MET HB2 H N N 247 MET HB3 H N N 248 MET HG2 H N N 249 MET HG3 H N N 250 MET HE1 H N N 251 MET HE2 H N N 252 MET HE3 H N N 253 MET HXT H N N 254 NAD PA P N S 255 NAD O1A O N N 256 NAD O2A O N N 257 NAD O5B O N N 258 NAD C5B C N N 259 NAD C4B C N R 260 NAD O4B O N N 261 NAD C3B C N S 262 NAD O3B O N N 263 NAD C2B C N R 264 NAD O2B O N N 265 NAD C1B C N R 266 NAD N9A N Y N 267 NAD C8A C Y N 268 NAD N7A N Y N 269 NAD C5A C Y N 270 NAD C6A C Y N 271 NAD N6A N N N 272 NAD N1A N Y N 273 NAD C2A C Y N 274 NAD N3A N Y N 275 NAD C4A C Y N 276 NAD O3 O N N 277 NAD PN P N N 278 NAD O1N O N N 279 NAD O2N O N N 280 NAD O5D O N N 281 NAD C5D C N N 282 NAD C4D C N R 283 NAD O4D O N N 284 NAD C3D C N S 285 NAD O3D O N N 286 NAD C2D C N R 287 NAD O2D O N N 288 NAD C1D C N R 289 NAD N1N N Y N 290 NAD C2N C Y N 291 NAD C3N C Y N 292 NAD C7N C N N 293 NAD O7N O N N 294 NAD N7N N N N 295 NAD C4N C Y N 296 NAD C5N C Y N 297 NAD C6N C Y N 298 NAD HOA2 H N N 299 NAD H51A H N N 300 NAD H52A H N N 301 NAD H4B H N N 302 NAD H3B H N N 303 NAD HO3A H N N 304 NAD H2B H N N 305 NAD HO2A H N N 306 NAD H1B H N N 307 NAD H8A H N N 308 NAD H61A H N N 309 NAD H62A H N N 310 NAD H2A H N N 311 NAD H51N H N N 312 NAD H52N H N N 313 NAD H4D H N N 314 NAD H3D H N N 315 NAD HO3N H N N 316 NAD H2D H N N 317 NAD HO2N H N N 318 NAD H1D H N N 319 NAD H2N H N N 320 NAD H71N H N N 321 NAD H72N H N N 322 NAD H4N H N N 323 NAD H5N H N N 324 NAD H6N H N N 325 PHE N N N N 326 PHE CA C N S 327 PHE C C N N 328 PHE O O N N 329 PHE CB C N N 330 PHE CG C Y N 331 PHE CD1 C Y N 332 PHE CD2 C Y N 333 PHE CE1 C Y N 334 PHE CE2 C Y N 335 PHE CZ C Y N 336 PHE OXT O N N 337 PHE H H N N 338 PHE H2 H N N 339 PHE HA H N N 340 PHE HB2 H N N 341 PHE HB3 H N N 342 PHE HD1 H N N 343 PHE HD2 H N N 344 PHE HE1 H N N 345 PHE HE2 H N N 346 PHE HZ H N N 347 PHE HXT H N N 348 PRO N N N N 349 PRO CA C N S 350 PRO C C N N 351 PRO O O N N 352 PRO CB C N N 353 PRO CG C N N 354 PRO CD C N N 355 PRO OXT O N N 356 PRO H H N N 357 PRO HA H N N 358 PRO HB2 H N N 359 PRO HB3 H N N 360 PRO HG2 H N N 361 PRO HG3 H N N 362 PRO HD2 H N N 363 PRO HD3 H N N 364 PRO HXT H N N 365 SER N N N N 366 SER CA C N S 367 SER C C N N 368 SER O O N N 369 SER CB C N N 370 SER OG O N N 371 SER OXT O N N 372 SER H H N N 373 SER H2 H N N 374 SER HA H N N 375 SER HB2 H N N 376 SER HB3 H N N 377 SER HG H N N 378 SER HXT H N N 379 SO4 S S N N 380 SO4 O1 O N N 381 SO4 O2 O N N 382 SO4 O3 O N N 383 SO4 O4 O N N 384 THR N N N N 385 THR CA C N S 386 THR C C N N 387 THR O O N N 388 THR CB C N R 389 THR OG1 O N N 390 THR CG2 C N N 391 THR OXT O N N 392 THR H H N N 393 THR H2 H N N 394 THR HA H N N 395 THR HB H N N 396 THR HG1 H N N 397 THR HG21 H N N 398 THR HG22 H N N 399 THR HG23 H N N 400 THR HXT H N N 401 TRP N N N N 402 TRP CA C N S 403 TRP C C N N 404 TRP O O N N 405 TRP CB C N N 406 TRP CG C Y N 407 TRP CD1 C Y N 408 TRP CD2 C Y N 409 TRP NE1 N Y N 410 TRP CE2 C Y N 411 TRP CE3 C Y N 412 TRP CZ2 C Y N 413 TRP CZ3 C Y N 414 TRP CH2 C Y N 415 TRP OXT O N N 416 TRP H H N N 417 TRP H2 H N N 418 TRP HA H N N 419 TRP HB2 H N N 420 TRP HB3 H N N 421 TRP HD1 H N N 422 TRP HE1 H N N 423 TRP HE3 H N N 424 TRP HZ2 H N N 425 TRP HZ3 H N N 426 TRP HH2 H N N 427 TRP HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 COI C1 O1 doub N N 70 COI C1 O2 sing N N 71 COI C1 C2 sing N N 72 COI O2 HO2 sing N N 73 COI C2 O3 doub N N 74 COI C2 C3 sing N N 75 COI C3 C4 sing N N 76 COI C3 H31 sing N N 77 COI C3 H32 sing N N 78 COI C4 C5 sing N N 79 COI C4 C6 sing N N 80 COI C4 H4 sing N N 81 COI C5 H51 sing N N 82 COI C5 H52 sing N N 83 COI C5 H53 sing N N 84 COI C6 H61 sing N N 85 COI C6 H62 sing N N 86 COI C6 H63 sing N N 87 GLN N CA sing N N 88 GLN N H sing N N 89 GLN N H2 sing N N 90 GLN CA C sing N N 91 GLN CA CB sing N N 92 GLN CA HA sing N N 93 GLN C O doub N N 94 GLN C OXT sing N N 95 GLN CB CG sing N N 96 GLN CB HB2 sing N N 97 GLN CB HB3 sing N N 98 GLN CG CD sing N N 99 GLN CG HG2 sing N N 100 GLN CG HG3 sing N N 101 GLN CD OE1 doub N N 102 GLN CD NE2 sing N N 103 GLN NE2 HE21 sing N N 104 GLN NE2 HE22 sing N N 105 GLN OXT HXT sing N N 106 GLU N CA sing N N 107 GLU N H sing N N 108 GLU N H2 sing N N 109 GLU CA C sing N N 110 GLU CA CB sing N N 111 GLU CA HA sing N N 112 GLU C O doub N N 113 GLU C OXT sing N N 114 GLU CB CG sing N N 115 GLU CB HB2 sing N N 116 GLU CB HB3 sing N N 117 GLU CG CD sing N N 118 GLU CG HG2 sing N N 119 GLU CG HG3 sing N N 120 GLU CD OE1 doub N N 121 GLU CD OE2 sing N N 122 GLU OE2 HE2 sing N N 123 GLU OXT HXT sing N N 124 GLY N CA sing N N 125 GLY N H sing N N 126 GLY N H2 sing N N 127 GLY CA C sing N N 128 GLY CA HA2 sing N N 129 GLY CA HA3 sing N N 130 GLY C O doub N N 131 GLY C OXT sing N N 132 GLY OXT HXT sing N N 133 HIS N CA sing N N 134 HIS N H sing N N 135 HIS N H2 sing N N 136 HIS CA C sing N N 137 HIS CA CB sing N N 138 HIS CA HA sing N N 139 HIS C O doub N N 140 HIS C OXT sing N N 141 HIS CB CG sing N N 142 HIS CB HB2 sing N N 143 HIS CB HB3 sing N N 144 HIS CG ND1 sing Y N 145 HIS CG CD2 doub Y N 146 HIS ND1 CE1 doub Y N 147 HIS ND1 HD1 sing N N 148 HIS CD2 NE2 sing Y N 149 HIS CD2 HD2 sing N N 150 HIS CE1 NE2 sing Y N 151 HIS CE1 HE1 sing N N 152 HIS NE2 HE2 sing N N 153 HIS OXT HXT sing N N 154 HOH O H1 sing N N 155 HOH O H2 sing N N 156 ILE N CA sing N N 157 ILE N H sing N N 158 ILE N H2 sing N N 159 ILE CA C sing N N 160 ILE CA CB sing N N 161 ILE CA HA sing N N 162 ILE C O doub N N 163 ILE C OXT sing N N 164 ILE CB CG1 sing N N 165 ILE CB CG2 sing N N 166 ILE CB HB sing N N 167 ILE CG1 CD1 sing N N 168 ILE CG1 HG12 sing N N 169 ILE CG1 HG13 sing N N 170 ILE CG2 HG21 sing N N 171 ILE CG2 HG22 sing N N 172 ILE CG2 HG23 sing N N 173 ILE CD1 HD11 sing N N 174 ILE CD1 HD12 sing N N 175 ILE CD1 HD13 sing N N 176 ILE OXT HXT sing N N 177 LEU N CA sing N N 178 LEU N H sing N N 179 LEU N H2 sing N N 180 LEU CA C sing N N 181 LEU CA CB sing N N 182 LEU CA HA sing N N 183 LEU C O doub N N 184 LEU C OXT sing N N 185 LEU CB CG sing N N 186 LEU CB HB2 sing N N 187 LEU CB HB3 sing N N 188 LEU CG CD1 sing N N 189 LEU CG CD2 sing N N 190 LEU CG HG sing N N 191 LEU CD1 HD11 sing N N 192 LEU CD1 HD12 sing N N 193 LEU CD1 HD13 sing N N 194 LEU CD2 HD21 sing N N 195 LEU CD2 HD22 sing N N 196 LEU CD2 HD23 sing N N 197 LEU OXT HXT sing N N 198 LYS N CA sing N N 199 LYS N H sing N N 200 LYS N H2 sing N N 201 LYS CA C sing N N 202 LYS CA CB sing N N 203 LYS CA HA sing N N 204 LYS C O doub N N 205 LYS C OXT sing N N 206 LYS CB CG sing N N 207 LYS CB HB2 sing N N 208 LYS CB HB3 sing N N 209 LYS CG CD sing N N 210 LYS CG HG2 sing N N 211 LYS CG HG3 sing N N 212 LYS CD CE sing N N 213 LYS CD HD2 sing N N 214 LYS CD HD3 sing N N 215 LYS CE NZ sing N N 216 LYS CE HE2 sing N N 217 LYS CE HE3 sing N N 218 LYS NZ HZ1 sing N N 219 LYS NZ HZ2 sing N N 220 LYS NZ HZ3 sing N N 221 LYS OXT HXT sing N N 222 MET N CA sing N N 223 MET N H sing N N 224 MET N H2 sing N N 225 MET CA C sing N N 226 MET CA CB sing N N 227 MET CA HA sing N N 228 MET C O doub N N 229 MET C OXT sing N N 230 MET CB CG sing N N 231 MET CB HB2 sing N N 232 MET CB HB3 sing N N 233 MET CG SD sing N N 234 MET CG HG2 sing N N 235 MET CG HG3 sing N N 236 MET SD CE sing N N 237 MET CE HE1 sing N N 238 MET CE HE2 sing N N 239 MET CE HE3 sing N N 240 MET OXT HXT sing N N 241 NAD PA O1A doub N N 242 NAD PA O2A sing N N 243 NAD PA O5B sing N N 244 NAD PA O3 sing N N 245 NAD O2A HOA2 sing N N 246 NAD O5B C5B sing N N 247 NAD C5B C4B sing N N 248 NAD C5B H51A sing N N 249 NAD C5B H52A sing N N 250 NAD C4B O4B sing N N 251 NAD C4B C3B sing N N 252 NAD C4B H4B sing N N 253 NAD O4B C1B sing N N 254 NAD C3B O3B sing N N 255 NAD C3B C2B sing N N 256 NAD C3B H3B sing N N 257 NAD O3B HO3A sing N N 258 NAD C2B O2B sing N N 259 NAD C2B C1B sing N N 260 NAD C2B H2B sing N N 261 NAD O2B HO2A sing N N 262 NAD C1B N9A sing N N 263 NAD C1B H1B sing N N 264 NAD N9A C8A sing Y N 265 NAD N9A C4A sing Y N 266 NAD C8A N7A doub Y N 267 NAD C8A H8A sing N N 268 NAD N7A C5A sing Y N 269 NAD C5A C6A sing Y N 270 NAD C5A C4A doub Y N 271 NAD C6A N6A sing N N 272 NAD C6A N1A doub Y N 273 NAD N6A H61A sing N N 274 NAD N6A H62A sing N N 275 NAD N1A C2A sing Y N 276 NAD C2A N3A doub Y N 277 NAD C2A H2A sing N N 278 NAD N3A C4A sing Y N 279 NAD O3 PN sing N N 280 NAD PN O1N doub N N 281 NAD PN O2N sing N N 282 NAD PN O5D sing N N 283 NAD O5D C5D sing N N 284 NAD C5D C4D sing N N 285 NAD C5D H51N sing N N 286 NAD C5D H52N sing N N 287 NAD C4D O4D sing N N 288 NAD C4D C3D sing N N 289 NAD C4D H4D sing N N 290 NAD O4D C1D sing N N 291 NAD C3D O3D sing N N 292 NAD C3D C2D sing N N 293 NAD C3D H3D sing N N 294 NAD O3D HO3N sing N N 295 NAD C2D O2D sing N N 296 NAD C2D C1D sing N N 297 NAD C2D H2D sing N N 298 NAD O2D HO2N sing N N 299 NAD C1D N1N sing N N 300 NAD C1D H1D sing N N 301 NAD N1N C2N sing Y N 302 NAD N1N C6N doub Y N 303 NAD C2N C3N doub Y N 304 NAD C2N H2N sing N N 305 NAD C3N C7N sing N N 306 NAD C3N C4N sing Y N 307 NAD C7N O7N doub N N 308 NAD C7N N7N sing N N 309 NAD N7N H71N sing N N 310 NAD N7N H72N sing N N 311 NAD C4N C5N doub Y N 312 NAD C4N H4N sing N N 313 NAD C5N C6N sing Y N 314 NAD C5N H5N sing N N 315 NAD C6N H6N sing N N 316 PHE N CA sing N N 317 PHE N H sing N N 318 PHE N H2 sing N N 319 PHE CA C sing N N 320 PHE CA CB sing N N 321 PHE CA HA sing N N 322 PHE C O doub N N 323 PHE C OXT sing N N 324 PHE CB CG sing N N 325 PHE CB HB2 sing N N 326 PHE CB HB3 sing N N 327 PHE CG CD1 doub Y N 328 PHE CG CD2 sing Y N 329 PHE CD1 CE1 sing Y N 330 PHE CD1 HD1 sing N N 331 PHE CD2 CE2 doub Y N 332 PHE CD2 HD2 sing N N 333 PHE CE1 CZ doub Y N 334 PHE CE1 HE1 sing N N 335 PHE CE2 CZ sing Y N 336 PHE CE2 HE2 sing N N 337 PHE CZ HZ sing N N 338 PHE OXT HXT sing N N 339 PRO N CA sing N N 340 PRO N CD sing N N 341 PRO N H sing N N 342 PRO CA C sing N N 343 PRO CA CB sing N N 344 PRO CA HA sing N N 345 PRO C O doub N N 346 PRO C OXT sing N N 347 PRO CB CG sing N N 348 PRO CB HB2 sing N N 349 PRO CB HB3 sing N N 350 PRO CG CD sing N N 351 PRO CG HG2 sing N N 352 PRO CG HG3 sing N N 353 PRO CD HD2 sing N N 354 PRO CD HD3 sing N N 355 PRO OXT HXT sing N N 356 SER N CA sing N N 357 SER N H sing N N 358 SER N H2 sing N N 359 SER CA C sing N N 360 SER CA CB sing N N 361 SER CA HA sing N N 362 SER C O doub N N 363 SER C OXT sing N N 364 SER CB OG sing N N 365 SER CB HB2 sing N N 366 SER CB HB3 sing N N 367 SER OG HG sing N N 368 SER OXT HXT sing N N 369 SO4 S O1 doub N N 370 SO4 S O2 doub N N 371 SO4 S O3 sing N N 372 SO4 S O4 sing N N 373 THR N CA sing N N 374 THR N H sing N N 375 THR N H2 sing N N 376 THR CA C sing N N 377 THR CA CB sing N N 378 THR CA HA sing N N 379 THR C O doub N N 380 THR C OXT sing N N 381 THR CB OG1 sing N N 382 THR CB CG2 sing N N 383 THR CB HB sing N N 384 THR OG1 HG1 sing N N 385 THR CG2 HG21 sing N N 386 THR CG2 HG22 sing N N 387 THR CG2 HG23 sing N N 388 THR OXT HXT sing N N 389 TRP N CA sing N N 390 TRP N H sing N N 391 TRP N H2 sing N N 392 TRP CA C sing N N 393 TRP CA CB sing N N 394 TRP CA HA sing N N 395 TRP C O doub N N 396 TRP C OXT sing N N 397 TRP CB CG sing N N 398 TRP CB HB2 sing N N 399 TRP CB HB3 sing N N 400 TRP CG CD1 doub Y N 401 TRP CG CD2 sing Y N 402 TRP CD1 NE1 sing Y N 403 TRP CD1 HD1 sing N N 404 TRP CD2 CE2 doub Y N 405 TRP CD2 CE3 sing Y N 406 TRP NE1 CE2 sing Y N 407 TRP NE1 HE1 sing N N 408 TRP CE2 CZ2 sing Y N 409 TRP CE3 CZ3 doub Y N 410 TRP CE3 HE3 sing N N 411 TRP CZ2 CH2 doub Y N 412 TRP CZ2 HZ2 sing N N 413 TRP CZ3 CH2 sing Y N 414 TRP CZ3 HZ3 sing N N 415 TRP CH2 HH2 sing N N 416 TRP OXT HXT sing N N 417 TYR N CA sing N N 418 TYR N H sing N N 419 TYR N H2 sing N N 420 TYR CA C sing N N 421 TYR CA CB sing N N 422 TYR CA HA sing N N 423 TYR C O doub N N 424 TYR C OXT sing N N 425 TYR CB CG sing N N 426 TYR CB HB2 sing N N 427 TYR CB HB3 sing N N 428 TYR CG CD1 doub Y N 429 TYR CG CD2 sing Y N 430 TYR CD1 CE1 sing Y N 431 TYR CD1 HD1 sing N N 432 TYR CD2 CE2 doub Y N 433 TYR CD2 HD2 sing N N 434 TYR CE1 CZ doub Y N 435 TYR CE1 HE1 sing N N 436 TYR CE2 CZ sing Y N 437 TYR CE2 HE2 sing N N 438 TYR CZ OH sing N N 439 TYR OH HH sing N N 440 TYR OXT HXT sing N N 441 VAL N CA sing N N 442 VAL N H sing N N 443 VAL N H2 sing N N 444 VAL CA C sing N N 445 VAL CA CB sing N N 446 VAL CA HA sing N N 447 VAL C O doub N N 448 VAL C OXT sing N N 449 VAL CB CG1 sing N N 450 VAL CB CG2 sing N N 451 VAL CB HB sing N N 452 VAL CG1 HG11 sing N N 453 VAL CG1 HG12 sing N N 454 VAL CG1 HG13 sing N N 455 VAL CG2 HG21 sing N N 456 VAL CG2 HG22 sing N N 457 VAL CG2 HG23 sing N N 458 VAL OXT HXT sing N N 459 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GDH _pdbx_initial_refinement_model.details 'BACKBONE AND C-BETA ATOMS OF D-GLYCERATE DEHYDROGENASE (PDB ENTRY 1GDH)' # _atom_sites.entry_id 1DXY _atom_sites.fract_transf_matrix[1][1] 0.007457 _atom_sites.fract_transf_matrix[1][2] 0.004305 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008611 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007994 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_