HEADER DNA BINDING DOMAIN 25-APR-00 1E17 TITLE SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE HUMAN FORKHEAD TITLE 2 TRANSCRIPTION FACTOR AFX (FOXO4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: AFX; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DNA BINDING DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELLULAR_LOCATION: NUCLEUS & CYTOPLASM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DNA BINDING DOMAIN, WINGED HELIX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.WEIGELT,I.CLIMENT,K.DAHLMAN-WRIGHT,M.WIKSTROM REVDAT 3 15-MAY-24 1E17 1 REMARK REVDAT 2 24-FEB-09 1E17 1 VERSN REVDAT 1 18-AUG-00 1E17 0 JRNL AUTH J.WEIGELT,I.CLIMENT,K.DAHLMAN-WRIGHT,M.WIKSTROM JRNL TITL 1H, 13C AND 15N RESONANCE ASSIGNMENTS OF THE DNA BINDING JRNL TITL 2 DOMAIN OF THE HUMAN FORKHEAD TRANSCRIPTION FACTOR AFX JRNL REF J.BIOMOL.NMR V. 17 181 2000 JRNL REFN ISSN 0925-2738 JRNL PMID 10921784 JRNL DOI 10.1023/A:1008358816478 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.85 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE REMARK 3 JRNL CITATION ABOVE. REMARK 4 REMARK 4 1E17 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-APR-00. REMARK 100 THE DEPOSITION ID IS D_1290004870. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 304 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 10% WATER/90% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : UNITY; INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR REMARK 210 METHOD USED : SIMULATED ANNEALING IN TORSION REMARK 210 ANGLE SPACE REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 85 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST X-PLOR ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: EXPERIMENTAL DETAILS CAN BE FOUND IN THE JRNL CITATION REMARK 210 ABOVE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 58 REMARK 465 SER A 59 REMARK 465 SER A 60 REMARK 465 HIS A 61 REMARK 465 HIS A 62 REMARK 465 HIS A 63 REMARK 465 HIS A 64 REMARK 465 HIS A 65 REMARK 465 HIS A 66 REMARK 465 SER A 67 REMARK 465 SER A 68 REMARK 465 GLY A 69 REMARK 465 LEU A 70 REMARK 465 VAL A 71 REMARK 465 PRO A 72 REMARK 465 ARG A 73 REMARK 465 GLY A 74 REMARK 465 SER A 75 REMARK 465 HIS A 76 REMARK 465 MET A 77 REMARK 465 LEU A 78 REMARK 465 GLU A 79 REMARK 465 ASP A 80 REMARK 465 PRO A 81 REMARK 465 GLY A 82 REMARK 465 ALA A 83 REMARK 465 VAL A 84 REMARK 465 THR A 85 REMARK 465 GLY A 86 REMARK 465 PRO A 87 REMARK 465 ARG A 88 REMARK 465 LYS A 89 REMARK 465 GLY A 90 REMARK 465 GLY A 91 REMARK 465 LYS A 182 REMARK 465 SER A 183 REMARK 465 GLY A 184 REMARK 465 LYS A 185 REMARK 465 ALA A 186 REMARK 465 PRO A 187 REMARK 465 ARG A 188 REMARK 465 ARG A 189 REMARK 465 ARG A 190 REMARK 465 ALA A 191 REMARK 465 ALA A 192 REMARK 465 SER A 193 REMARK 465 MET A 194 REMARK 465 ASP A 195 REMARK 465 SER A 196 REMARK 465 SER A 197 REMARK 465 SER A 198 REMARK 465 LYS A 199 REMARK 465 LEU A 200 REMARK 465 LEU A 201 REMARK 465 ARG A 202 REMARK 465 GLY A 203 REMARK 465 ARG A 204 REMARK 465 SER A 205 REMARK 465 LYS A 206 REMARK 465 ALA A 207 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD21 ASN A 177 H GLU A 179 1.03 REMARK 500 O TRP A 126 H THR A 130 1.54 REMARK 500 O GLU A 166 H THR A 168 1.56 REMARK 500 OD1 ASN A 165 HE1 TRP A 173 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 95 -163.02 -173.64 REMARK 500 1 ALA A 96 -124.34 82.52 REMARK 500 1 ASN A 99 36.55 -72.21 REMARK 500 1 SER A 142 -13.63 -44.20 REMARK 500 1 HIS A 157 95.00 61.52 REMARK 500 1 SER A 158 6.70 -57.41 REMARK 500 1 ALA A 167 34.64 -65.95 REMARK 500 2 ALA A 96 -126.15 45.24 REMARK 500 2 TRP A 97 0.51 -60.16 REMARK 500 2 ASN A 99 -11.47 -168.95 REMARK 500 2 HIS A 157 95.76 67.84 REMARK 500 2 ALA A 167 66.27 -68.24 REMARK 500 3 ASN A 95 0.77 -51.71 REMARK 500 3 HIS A 157 100.07 53.77 REMARK 500 3 ALA A 167 60.42 -64.48 REMARK 500 3 THR A 168 20.87 45.90 REMARK 500 3 PRO A 178 -16.80 -44.09 REMARK 500 4 ALA A 96 -78.37 174.24 REMARK 500 4 ASN A 99 21.73 33.71 REMARK 500 4 ALA A 167 75.13 -67.53 REMARK 500 5 ALA A 96 -114.93 131.49 REMARK 500 5 ASN A 99 1.94 85.72 REMARK 500 5 PRO A 132 -13.51 -45.86 REMARK 500 5 TRP A 146 -17.24 -49.82 REMARK 500 5 HIS A 157 106.89 65.29 REMARK 500 5 ALA A 167 -0.85 -57.30 REMARK 500 5 THR A 168 50.43 32.64 REMARK 500 6 ALA A 144 2.20 -62.30 REMARK 500 6 ALA A 167 67.73 -63.53 REMARK 500 7 ALA A 96 -115.54 175.83 REMARK 500 7 ASN A 99 21.18 -71.16 REMARK 500 7 LYS A 116 37.41 70.28 REMARK 500 7 ASP A 139 20.82 -79.11 REMARK 500 7 SER A 143 29.15 -142.64 REMARK 500 7 ALA A 144 -7.03 -49.31 REMARK 500 7 HIS A 157 126.43 59.92 REMARK 500 7 ALA A 167 73.44 -68.67 REMARK 500 7 PRO A 178 2.39 -48.39 REMARK 500 8 ALA A 96 -128.58 50.49 REMARK 500 8 ALA A 144 1.02 -55.37 REMARK 500 8 ALA A 167 69.23 -66.67 REMARK 500 8 THR A 168 -19.19 -44.26 REMARK 500 8 PRO A 178 31.52 -58.03 REMARK 500 9 ASN A 95 6.76 -56.95 REMARK 500 9 ASN A 99 53.36 34.72 REMARK 500 9 LYS A 147 -70.48 -39.33 REMARK 500 9 HIS A 157 114.78 58.27 REMARK 500 9 SER A 158 -4.77 -59.74 REMARK 500 9 ALA A 167 66.97 -68.94 REMARK 500 10 ARG A 93 34.18 -74.41 REMARK 500 REMARK 500 THIS ENTRY HAS 123 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4675 RELATED DB: BMRB REMARK 900 1H, 13C AND 15N CHEMICAL SHIFTS REMARK 999 REMARK 999 SEQUENCE REMARK 999 GLY 58 - PRO 81 IN PDB ENTRY BELONG TO ARTIFICIAL HIS-TAG DBREF 1E17 A 58 81 PDB 1E17 1E17 58 81 DBREF 1E17 A 82 207 UNP P98177 AFX1_HUMAN 82 207 SEQADV 1E17 LEU A 105 UNP P98177 PHE 105 CONFLICT SEQRES 1 A 150 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 150 VAL PRO ARG GLY SER HIS MET LEU GLU ASP PRO GLY ALA SEQRES 3 A 150 VAL THR GLY PRO ARG LYS GLY GLY SER ARG ARG ASN ALA SEQRES 4 A 150 TRP GLY ASN GLN SER TYR ALA GLU LEU ILE SER GLN ALA SEQRES 5 A 150 ILE GLU SER ALA PRO GLU LYS ARG LEU THR LEU ALA GLN SEQRES 6 A 150 ILE TYR GLU TRP MET VAL ARG THR VAL PRO TYR PHE LYS SEQRES 7 A 150 ASP LYS GLY ASP SER ASN SER SER ALA GLY TRP LYS ASN SEQRES 8 A 150 SER ILE ARG HIS ASN LEU SER LEU HIS SER LYS PHE ILE SEQRES 9 A 150 LYS VAL HIS ASN GLU ALA THR GLY LYS SER SER TRP TRP SEQRES 10 A 150 MET LEU ASN PRO GLU GLY GLY LYS SER GLY LYS ALA PRO SEQRES 11 A 150 ARG ARG ARG ALA ALA SER MET ASP SER SER SER LYS LEU SEQRES 12 A 150 LEU ARG GLY ARG SER LYS ALA HELIX 1 1 SER A 101 ALA A 113 1 13 HELIX 2 2 LEU A 120 VAL A 131 1 12 HELIX 3 3 PHE A 134 ASP A 139 1 6 HELIX 4 4 SER A 142 LEU A 156 1 15 SHEET 1 A 2 PHE A 160 VAL A 163 0 SHEET 2 A 2 TRP A 173 LEU A 176 -1 N MET A 175 O ILE A 161 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1