HEADER OXIDOREDUCTASE 16-JUN-00 1E3I TITLE MOUSE CLASS II ALCOHOL DEHYDROGENASE COMPLEX WITH NADH AND INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL DEHYDROGENASE, CLASS II; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 ORGAN: LIVER; SOURCE 6 GENE: ADH-2; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SVENSSON,J.O.HOOG,G.SCHNEIDER,T.SANDALOVA REVDAT 5 13-DEC-23 1E3I 1 REMARK LINK REVDAT 4 17-JAN-18 1E3I 1 REMARK REVDAT 3 30-OCT-13 1E3I 1 TITLE JRNL REMARK VERSN REVDAT 3 2 1 HET HETNAM HETSYN FORMUL REVDAT 3 3 1 SHEET LINK SITE HETATM REVDAT 3 4 1 CONECT MASTER REVDAT 2 24-FEB-09 1E3I 1 VERSN REVDAT 1 12-SEP-00 1E3I 0 JRNL AUTH S.SVENSSON,J.O.HOEOEG,G.SCHNEIDER,T.SANDALOVA JRNL TITL CRYSTAL STRUCTURE OF MOUSE CLASS II ALCOHOL DEHYDROGENASE JRNL TITL 2 REVEAL DETERMINANTS OF SUBSTRATE SPECIFICITY AND CATALYTIC JRNL TITL 3 EFFICIENCY JRNL REF J.MOL.BIOL. V. 302 441 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10970744 JRNL DOI 10.1006/JMBI.2000.4039 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.SVENSSON,P.STROEMBERG,J.O.HOEOEG REMARK 1 TITL A NOVEL SUBTYPE OF CLASS II ALCOHOL DEHYDROGENASE IN RODENTS REMARK 1 REF J.BIOL.CHEM. V. 274 29712 1999 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 10514444 REMARK 1 DOI 10.1074/JBC.274.42.29712 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.9 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 39064 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5580 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 369 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.07900 REMARK 3 B22 (A**2) : -13.30700 REMARK 3 B33 (A**2) : 5.22800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : ANISOTROPIC BULK SOLVENT CORRECTION REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1E3I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUN-00. REMARK 100 THE DEPOSITION ID IS D_1290005028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-99 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 8.30 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.042 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40001 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.17400 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1CDO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.30 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.62650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.09350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.53500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.09350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.62650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.53500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 1 REMARK 465 THR B 2 REMARK 465 GLN B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 20 C LEU A 21 N 0.202 REMARK 500 VAL A 45 C CYS A 46 N 0.177 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 46 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 17 171.44 -55.95 REMARK 500 HIS A 67 -1.42 -152.52 REMARK 500 ASP A 129 24.10 -74.27 REMARK 500 VAL A 147 -64.70 -129.53 REMARK 500 SER A 148 72.25 55.41 REMARK 500 PHE A 150 46.49 -87.34 REMARK 500 ASP A 165 131.82 -37.37 REMARK 500 ARG A 172 -41.75 -130.75 REMARK 500 CYS A 178 -62.25 -159.50 REMARK 500 TRP A 290 10.70 -145.55 REMARK 500 ILE A 370 -70.47 -101.78 REMARK 500 LYS B 32 -155.42 -91.11 REMARK 500 HIS B 67 0.18 -161.17 REMARK 500 ARG B 115 -32.94 -130.06 REMARK 500 MET B 127 -175.74 -68.91 REMARK 500 VAL B 147 -62.28 -124.49 REMARK 500 CYS B 178 -70.52 -166.58 REMARK 500 TRP B 290 10.45 -145.53 REMARK 500 ILE B 370 -69.24 -100.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 380 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 46 SG REMARK 620 2 HIS A 67 NE2 106.9 REMARK 620 3 CYS A 178 SG 127.5 114.5 REMARK 620 4 CXF A 378 O9 92.8 105.5 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 381 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 SG REMARK 620 2 CYS A 100 SG 109.4 REMARK 620 3 CYS A 103 SG 122.5 103.9 REMARK 620 4 CYS A 111 SG 97.0 125.5 100.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 380 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 46 SG REMARK 620 2 HIS B 67 NE2 108.2 REMARK 620 3 CYS B 178 SG 138.0 105.3 REMARK 620 4 CXF B 378 C7 112.1 106.0 81.6 REMARK 620 5 CXF B 378 O9 82.0 127.9 97.0 31.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 381 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 97 SG REMARK 620 2 CYS B 100 SG 105.9 REMARK 620 3 CYS B 103 SG 124.3 105.5 REMARK 620 4 CYS B 111 SG 95.8 121.2 105.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 381 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 381 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CXF A 378 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI B 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CXF B 378 DBREF 1E3I A 1 376 UNP Q9QYY9 Q9QYY9 2 377 DBREF 1E3I B 1 376 UNP Q9QYY9 Q9QYY9 2 377 SEQRES 1 A 376 GLY THR GLN GLY LYS VAL ILE LYS CYS LYS ALA ALA ILE SEQRES 2 A 376 ALA TRP LYS THR GLY SER PRO LEU CYS ILE GLU GLU ILE SEQRES 3 A 376 GLU VAL SER PRO PRO LYS ALA CYS GLU VAL ARG ILE GLN SEQRES 4 A 376 VAL ILE ALA THR CYS VAL CYS PRO THR ASP ILE ASN ALA SEQRES 5 A 376 THR ASP PRO LYS LYS LYS ALA LEU PHE PRO VAL VAL LEU SEQRES 6 A 376 GLY HIS GLU CYS ALA GLY ILE VAL GLU SER VAL GLY PRO SEQRES 7 A 376 GLY VAL THR ASN PHE LYS PRO GLY ASP LYS VAL ILE PRO SEQRES 8 A 376 PHE PHE ALA PRO GLN CYS LYS ARG CYS LYS LEU CYS LEU SEQRES 9 A 376 SER PRO LEU THR ASN LEU CYS GLY LYS LEU ARG ASN PHE SEQRES 10 A 376 LYS TYR PRO THR ILE ASP GLN GLU LEU MET GLU ASP ARG SEQRES 11 A 376 THR SER ARG PHE THR CYS LYS GLY ARG SER ILE TYR HIS SEQRES 12 A 376 PHE MET GLY VAL SER SER PHE SER GLN TYR THR VAL VAL SEQRES 13 A 376 SER GLU ALA ASN LEU ALA ARG VAL ASP ASP GLU ALA ASN SEQRES 14 A 376 LEU GLU ARG VAL CYS LEU ILE GLY CYS GLY PHE SER SER SEQRES 15 A 376 GLY TYR GLY ALA ALA ILE ASN THR ALA LYS VAL THR PRO SEQRES 16 A 376 GLY SER THR CYS ALA VAL PHE GLY LEU GLY CYS VAL GLY SEQRES 17 A 376 LEU SER ALA ILE ILE GLY CYS LYS ILE ALA GLY ALA SER SEQRES 18 A 376 ARG ILE ILE ALA ILE ASP ILE ASN GLY GLU LYS PHE PRO SEQRES 19 A 376 LYS ALA LYS ALA LEU GLY ALA THR ASP CYS LEU ASN PRO SEQRES 20 A 376 ARG GLU LEU ASP LYS PRO VAL GLN ASP VAL ILE THR GLU SEQRES 21 A 376 LEU THR ALA GLY GLY VAL ASP TYR SER LEU ASP CYS ALA SEQRES 22 A 376 GLY THR ALA GLN THR LEU LYS ALA ALA VAL ASP CYS THR SEQRES 23 A 376 VAL LEU GLY TRP GLY SER CYS THR VAL VAL GLY ALA LYS SEQRES 24 A 376 VAL ASP GLU MET THR ILE PRO THR VAL ASP VAL ILE LEU SEQRES 25 A 376 GLY ARG SER ILE ASN GLY THR PHE PHE GLY GLY TRP LYS SEQRES 26 A 376 SER VAL ASP SER VAL PRO ASN LEU VAL SER ASP TYR LYS SEQRES 27 A 376 ASN LYS LYS PHE ASP LEU ASP LEU LEU VAL THR HIS ALA SEQRES 28 A 376 LEU PRO PHE GLU SER ILE ASN ASP ALA ILE ASP LEU MET SEQRES 29 A 376 LYS GLU GLY LYS SER ILE ARG THR ILE LEU THR PHE SEQRES 1 B 376 GLY THR GLN GLY LYS VAL ILE LYS CYS LYS ALA ALA ILE SEQRES 2 B 376 ALA TRP LYS THR GLY SER PRO LEU CYS ILE GLU GLU ILE SEQRES 3 B 376 GLU VAL SER PRO PRO LYS ALA CYS GLU VAL ARG ILE GLN SEQRES 4 B 376 VAL ILE ALA THR CYS VAL CYS PRO THR ASP ILE ASN ALA SEQRES 5 B 376 THR ASP PRO LYS LYS LYS ALA LEU PHE PRO VAL VAL LEU SEQRES 6 B 376 GLY HIS GLU CYS ALA GLY ILE VAL GLU SER VAL GLY PRO SEQRES 7 B 376 GLY VAL THR ASN PHE LYS PRO GLY ASP LYS VAL ILE PRO SEQRES 8 B 376 PHE PHE ALA PRO GLN CYS LYS ARG CYS LYS LEU CYS LEU SEQRES 9 B 376 SER PRO LEU THR ASN LEU CYS GLY LYS LEU ARG ASN PHE SEQRES 10 B 376 LYS TYR PRO THR ILE ASP GLN GLU LEU MET GLU ASP ARG SEQRES 11 B 376 THR SER ARG PHE THR CYS LYS GLY ARG SER ILE TYR HIS SEQRES 12 B 376 PHE MET GLY VAL SER SER PHE SER GLN TYR THR VAL VAL SEQRES 13 B 376 SER GLU ALA ASN LEU ALA ARG VAL ASP ASP GLU ALA ASN SEQRES 14 B 376 LEU GLU ARG VAL CYS LEU ILE GLY CYS GLY PHE SER SER SEQRES 15 B 376 GLY TYR GLY ALA ALA ILE ASN THR ALA LYS VAL THR PRO SEQRES 16 B 376 GLY SER THR CYS ALA VAL PHE GLY LEU GLY CYS VAL GLY SEQRES 17 B 376 LEU SER ALA ILE ILE GLY CYS LYS ILE ALA GLY ALA SER SEQRES 18 B 376 ARG ILE ILE ALA ILE ASP ILE ASN GLY GLU LYS PHE PRO SEQRES 19 B 376 LYS ALA LYS ALA LEU GLY ALA THR ASP CYS LEU ASN PRO SEQRES 20 B 376 ARG GLU LEU ASP LYS PRO VAL GLN ASP VAL ILE THR GLU SEQRES 21 B 376 LEU THR ALA GLY GLY VAL ASP TYR SER LEU ASP CYS ALA SEQRES 22 B 376 GLY THR ALA GLN THR LEU LYS ALA ALA VAL ASP CYS THR SEQRES 23 B 376 VAL LEU GLY TRP GLY SER CYS THR VAL VAL GLY ALA LYS SEQRES 24 B 376 VAL ASP GLU MET THR ILE PRO THR VAL ASP VAL ILE LEU SEQRES 25 B 376 GLY ARG SER ILE ASN GLY THR PHE PHE GLY GLY TRP LYS SEQRES 26 B 376 SER VAL ASP SER VAL PRO ASN LEU VAL SER ASP TYR LYS SEQRES 27 B 376 ASN LYS LYS PHE ASP LEU ASP LEU LEU VAL THR HIS ALA SEQRES 28 B 376 LEU PRO PHE GLU SER ILE ASN ASP ALA ILE ASP LEU MET SEQRES 29 B 376 LYS GLU GLY LYS SER ILE ARG THR ILE LEU THR PHE HET NAI A 377 44 HET CXF A 378 9 HET ZN A 380 1 HET ZN A 381 1 HET NAI B 377 44 HET CXF B 378 9 HET ZN B 380 1 HET ZN B 381 1 HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETNAM CXF CYCLOHEXYLFORMAMIDE HETNAM ZN ZINC ION HETSYN NAI NADH FORMUL 3 NAI 2(C21 H29 N7 O14 P2) FORMUL 4 CXF 2(C7 H13 N O) FORMUL 5 ZN 4(ZN 2+) FORMUL 11 HOH *369(H2 O) HELIX 1 1 CYS A 46 ALA A 52 1 7 HELIX 2 2 CYS A 100 SER A 105 1 6 HELIX 3 3 TYR A 119 ASP A 123 5 5 HELIX 4 4 ASN A 169 CYS A 174 1 6 HELIX 5 5 LEU A 175 GLY A 177 5 3 HELIX 6 6 CYS A 178 ASN A 189 1 12 HELIX 7 7 GLY A 205 ALA A 218 1 14 HELIX 8 8 ASN A 229 GLU A 231 5 3 HELIX 9 9 LYS A 232 LEU A 239 1 8 HELIX 10 10 ASN A 246 LEU A 250 5 5 HELIX 11 11 PRO A 253 THR A 262 1 10 HELIX 12 12 THR A 275 CYS A 285 1 11 HELIX 13 13 THR A 307 LEU A 312 1 6 HELIX 14 14 PHE A 320 TRP A 324 5 5 HELIX 15 15 LYS A 325 ASN A 339 1 15 HELIX 16 16 ASP A 343 LEU A 346 5 4 HELIX 17 17 SER A 356 GLU A 366 1 11 HELIX 18 18 CYS B 46 ALA B 52 1 7 HELIX 19 19 CYS B 100 SER B 105 1 6 HELIX 20 20 TYR B 119 ASP B 123 5 5 HELIX 21 21 ARG B 172 GLY B 177 5 6 HELIX 22 22 CYS B 178 ASN B 189 1 12 HELIX 23 23 GLY B 205 ALA B 218 1 14 HELIX 24 24 ASN B 229 GLU B 231 5 3 HELIX 25 25 LYS B 232 LEU B 239 1 8 HELIX 26 26 ASN B 246 LEU B 250 5 5 HELIX 27 27 PRO B 253 THR B 262 1 10 HELIX 28 28 THR B 275 CYS B 285 1 11 HELIX 29 29 THR B 307 LEU B 312 1 6 HELIX 30 30 PHE B 320 TRP B 324 5 5 HELIX 31 31 LYS B 325 ASN B 339 1 15 HELIX 32 32 ASP B 343 LEU B 346 5 4 HELIX 33 33 SER B 356 GLU B 366 1 11 SHEET 1 AA 4 ILE A 7 ILE A 13 0 SHEET 2 AA 4 CYS A 22 VAL A 28 -1 O CYS A 22 N ILE A 13 SHEET 3 AA 4 PHE A 134 CYS A 136 -1 O THR A 135 N GLU A 27 SHEET 4 AA 4 ARG A 139 ILE A 141 -1 O ARG A 139 N CYS A 136 SHEET 1 AB 2 TYR A 153 SER A 157 0 SHEET 2 AB 2 GLU A 35 CYS A 44 -1 O VAL A 36 N VAL A 156 SHEET 1 AC 6 LEU A 161 ARG A 163 0 SHEET 2 AC 6 LYS A 88 PRO A 91 -1 O ILE A 90 N ALA A 162 SHEET 3 AC 6 GLU A 68 VAL A 76 -1 O GLY A 71 N VAL A 89 SHEET 4 AC 6 GLU A 35 CYS A 44 -1 O ARG A 37 N GLU A 74 SHEET 5 AC 6 ARG A 371 THR A 375 -1 O LEU A 374 N THR A 43 SHEET 6 AC 6 VAL A 348 PRO A 353 1 N THR A 349 O ARG A 371 SHEET 1 AD 5 LEU A 161 ARG A 163 0 SHEET 2 AD 5 LYS A 88 PRO A 91 -1 O ILE A 90 N ALA A 162 SHEET 3 AD 5 GLU A 68 VAL A 76 -1 O GLY A 71 N VAL A 89 SHEET 4 AD 5 GLU A 35 CYS A 44 -1 O ARG A 37 N GLU A 74 SHEET 5 AD 5 TYR A 153 SER A 157 -1 O THR A 154 N ILE A 38 SHEET 1 AE 6 ASP A 243 LEU A 245 0 SHEET 2 AE 6 ARG A 222 ILE A 226 1 O ALA A 225 N LEU A 245 SHEET 3 AE 6 THR A 198 PHE A 202 1 O CYS A 199 N ILE A 224 SHEET 4 AE 6 TYR A 268 ASP A 271 1 O TYR A 268 N ALA A 200 SHEET 5 AE 6 SER A 292 VAL A 295 1 O SER A 292 N SER A 269 SHEET 6 AE 6 SER A 315 GLY A 318 1 O SER A 315 N CYS A 293 SHEET 1 AF 2 GLU A 302 PRO A 306 0 SHEET 2 AF 2 GLU B 302 PRO B 306 -1 O MET B 303 N ILE A 305 SHEET 1 BA 5 VAL B 63 VAL B 64 0 SHEET 2 BA 5 ILE B 7 ALA B 14 -1 O ALA B 14 N VAL B 63 SHEET 3 BA 5 CYS B 22 VAL B 28 -1 O CYS B 22 N ILE B 13 SHEET 4 BA 5 PHE B 134 CYS B 136 -1 O THR B 135 N GLU B 27 SHEET 5 BA 5 ARG B 139 ILE B 141 -1 O ARG B 139 N CYS B 136 SHEET 1 BB 2 TYR B 153 SER B 157 0 SHEET 2 BB 2 GLU B 35 CYS B 44 -1 O VAL B 36 N VAL B 156 SHEET 1 BC 6 LEU B 161 VAL B 164 0 SHEET 2 BC 6 LYS B 88 PRO B 91 -1 O LYS B 88 N VAL B 164 SHEET 3 BC 6 GLU B 68 VAL B 76 -1 O GLY B 71 N VAL B 89 SHEET 4 BC 6 GLU B 35 CYS B 44 -1 O ARG B 37 N GLU B 74 SHEET 5 BC 6 ARG B 371 THR B 375 -1 O LEU B 374 N THR B 43 SHEET 6 BC 6 VAL B 348 PRO B 353 1 N THR B 349 O ARG B 371 SHEET 1 BD 5 LEU B 161 VAL B 164 0 SHEET 2 BD 5 LYS B 88 PRO B 91 -1 O LYS B 88 N VAL B 164 SHEET 3 BD 5 GLU B 68 VAL B 76 -1 O GLY B 71 N VAL B 89 SHEET 4 BD 5 GLU B 35 CYS B 44 -1 O ARG B 37 N GLU B 74 SHEET 5 BD 5 TYR B 153 SER B 157 -1 O THR B 154 N ILE B 38 SHEET 1 BE 6 ASP B 243 LEU B 245 0 SHEET 2 BE 6 ARG B 222 ILE B 226 1 O ALA B 225 N LEU B 245 SHEET 3 BE 6 THR B 198 PHE B 202 1 O CYS B 199 N ILE B 224 SHEET 4 BE 6 TYR B 268 ASP B 271 1 O TYR B 268 N ALA B 200 SHEET 5 BE 6 SER B 292 VAL B 295 1 O SER B 292 N SER B 269 SHEET 6 BE 6 SER B 315 GLY B 318 1 O SER B 315 N CYS B 293 LINK SG CYS A 46 ZN ZN A 380 1555 1555 2.31 LINK NE2 HIS A 67 ZN ZN A 380 1555 1555 2.20 LINK SG CYS A 97 ZN ZN A 381 1555 1555 2.31 LINK SG CYS A 100 ZN ZN A 381 1555 1555 2.31 LINK SG CYS A 103 ZN ZN A 381 1555 1555 2.29 LINK SG CYS A 111 ZN ZN A 381 1555 1555 2.30 LINK SG CYS A 178 ZN ZN A 380 1555 1555 2.29 LINK O9 CXF A 378 ZN ZN A 380 1555 1555 2.16 LINK SG CYS B 46 ZN ZN B 380 1555 1555 2.27 LINK NE2 HIS B 67 ZN ZN B 380 1555 1555 2.21 LINK SG CYS B 97 ZN ZN B 381 1555 1555 2.32 LINK SG CYS B 100 ZN ZN B 381 1555 1555 2.29 LINK SG CYS B 103 ZN ZN B 381 1555 1555 2.31 LINK SG CYS B 111 ZN ZN B 381 1555 1555 2.30 LINK SG CYS B 178 ZN ZN B 380 1555 1555 2.30 LINK C7 CXF B 378 ZN ZN B 380 1555 1555 2.09 LINK O9 CXF B 378 ZN ZN B 380 1555 1555 2.23 CISPEP 1 PHE A 61 PRO A 62 0 -1.08 CISPEP 2 PHE B 61 PRO B 62 0 -0.84 SITE 1 AC1 4 CYS A 46 HIS A 67 CYS A 178 CXF A 378 SITE 1 AC2 5 CYS A 97 CYS A 100 CYS A 103 CYS A 111 SITE 2 AC2 5 GLY A 112 SITE 1 AC3 4 CYS B 46 HIS B 67 CYS B 178 CXF B 378 SITE 1 AC4 5 CYS B 97 CYS B 100 CYS B 103 CYS B 111 SITE 2 AC4 5 GLY B 112 SITE 1 AC5 28 PRO A 47 THR A 48 CYS A 178 SER A 182 SITE 2 AC5 28 GLY A 203 GLY A 205 CYS A 206 VAL A 207 SITE 3 AC5 28 ASP A 227 ILE A 228 LYS A 232 CYS A 272 SITE 4 AC5 28 THR A 275 THR A 278 VAL A 296 GLY A 297 SITE 5 AC5 28 THR A 319 PHE A 320 PHE A 321 ARG A 371 SITE 6 AC5 28 CXF A 378 HOH A2136 HOH A2179 HOH A2180 SITE 7 AC5 28 HOH A2184 HOH A2185 HOH A2186 ASP B 362 SITE 1 AC6 8 CYS A 46 THR A 48 HIS A 67 PHE A 93 SITE 2 AC6 8 MET A 145 CYS A 178 NAI A 377 ZN A 380 SITE 1 AC7 30 PRO B 47 THR B 48 CYS B 178 SER B 182 SITE 2 AC7 30 GLY B 203 GLY B 205 CYS B 206 VAL B 207 SITE 3 AC7 30 ASP B 227 ILE B 228 LYS B 232 CYS B 272 SITE 4 AC7 30 THR B 278 VAL B 296 GLY B 297 THR B 319 SITE 5 AC7 30 PHE B 320 PHE B 321 ARG B 371 CXF B 378 SITE 6 AC7 30 HOH B2096 HOH B2103 HOH B2132 HOH B2134 SITE 7 AC7 30 HOH B2176 HOH B2177 HOH B2180 HOH B2181 SITE 8 AC7 30 HOH B2182 HOH B2183 SITE 1 AC8 7 CYS B 46 THR B 48 HIS B 67 PHE B 93 SITE 2 AC8 7 CYS B 178 NAI B 377 ZN B 380 CRYST1 79.253 81.070 102.187 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009786 0.00000