data_1EG6
# 
_entry.id   1EG6 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.385 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1EG6         pdb_00001eg6 10.2210/pdb1eg6/pdb 
NDB   DD0026       ?            ?                   
RCSB  RCSB010543   ?            ?                   
WWPDB D_1000010543 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2001-01-03 
2 'Structure model' 1 1 2007-10-16 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-07 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom         
2 4 'Structure model' chem_comp_bond         
3 4 'Structure model' database_2             
4 4 'Structure model' diffrn_source          
5 4 'Structure model' pdbx_struct_conn_angle 
6 4 'Structure model' struct_conn            
7 4 'Structure model' struct_site            
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                      
2  4 'Structure model' '_database_2.pdbx_database_accession'       
3  4 'Structure model' '_diffrn_source.pdbx_synchrotron_site'      
4  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 
5  4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 
6  4 'Structure model' '_pdbx_struct_conn_angle.value'             
7  4 'Structure model' '_struct_conn.pdbx_dist_value'              
8  4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'           
9  4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'           
10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'            
11 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'          
12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'          
13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'          
14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'           
15 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'           
16 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'           
17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'            
18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'          
19 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'          
20 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'          
21 4 'Structure model' '_struct_site.pdbx_auth_asym_id'            
22 4 'Structure model' '_struct_site.pdbx_auth_comp_id'            
23 4 'Structure model' '_struct_site.pdbx_auth_seq_id'             
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1EG6 
_pdbx_database_status.recvd_initial_deposition_date   2000-02-14 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Cardin, C.J.' 1 
'Denny, W.A.'  2 
'Hobbs, J.R.'  3 
'Thorpe, J.H.' 4 
# 
_citation.id                        primary 
_citation.title                     
'Guanine specific binding at a DNA junction formed by d[CG(5-BrU)ACG](2) with a topoisomerase poison in the presence of Co(2+) ions.' 
_citation.journal_abbrev            Biochemistry 
_citation.journal_volume            39 
_citation.page_first                15055 
_citation.page_last                 15061 
_citation.year                      2000 
_citation.journal_id_ASTM           BICHAW 
_citation.country                   US 
_citation.journal_id_ISSN           0006-2960 
_citation.journal_id_CSD            0033 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   11106483 
_citation.pdbx_database_id_DOI      10.1021/bi001749p 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Thorpe, J.H.' 1 ? 
primary 'Hobbs, J.R.'  2 ? 
primary 'Todd, A.K.'   3 ? 
primary 'Denny, W.A.'  4 ? 
primary 'Charlton, P.' 5 ? 
primary 'Cardin, C.J.' 6 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3'"                                   1795.191 2  ? ? ? ? 
2 non-polymer syn 'COBALT (III) ION'                                                  58.933   2  ? ? ? ? 
3 non-polymer syn 'BROMIDE ION'                                                       79.904   2  ? ? ? ? 
4 non-polymer syn '9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE' 373.247  1  ? ? ? ? 
5 water       nat water                                                               18.015   37 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DG)(DU)(DA)(DC)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CGUACG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'COBALT (III) ION'                                                  3CO 
3 'BROMIDE ION'                                                       BR  
4 '9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE' BFA 
5 water                                                               HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 DC n 
1 2 DG n 
1 3 DU n 
1 4 DA n 
1 5 DC n 
1 6 DG n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
3CO non-polymer   . 'COBALT (III) ION'                                                  ? 'Co 3'            58.933  
BFA non-polymer   . '9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE' ? 'C17 H17 Br N4 O' 373.247 
BR  non-polymer   . 'BROMIDE ION'                                                       ? 'Br -1'           79.904  
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"                                ? 'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"                                 ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"                                ? 'C10 H14 N5 O7 P' 347.221 
DU  'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE"                                  ? 'C9 H13 N2 O8 P'  308.182 
HOH non-polymer   . WATER                                                               ? 'H2 O'            18.015  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 DC 1 1 1 DC C A . n 
A 1 2 DG 2 2 2 DG G A . n 
A 1 3 DU 3 3 3 DU U A . n 
A 1 4 DA 4 4 4 DA A A . n 
A 1 5 DC 5 5 5 DC C A . n 
A 1 6 DG 6 6 6 DG G A . n 
B 1 1 DC 1 1 ? ?  ? B . n 
B 1 2 DG 2 2 2 DG G B . n 
B 1 3 DU 3 3 3 DU U B . n 
B 1 4 DA 4 4 4 DA A B . n 
B 1 5 DC 5 5 5 DC C B . n 
B 1 6 DG 6 6 6 DG G B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 3CO 1  40 40 3CO 3CO A . 
D 3 BR  1  41 3  BR  BRO A . 
E 2 3CO 1  43 43 3CO 3CO B . 
F 3 BR  1  44 3  BR  BRO B . 
G 4 BFA 1  50 50 BFA BFA B . 
H 5 HOH 1  42 41 HOH HOH A . 
H 5 HOH 2  43 42 HOH HOH A . 
H 5 HOH 3  44 1  HOH HOH A . 
H 5 HOH 4  45 2  HOH HOH A . 
H 5 HOH 5  46 6  HOH HOH A . 
H 5 HOH 6  47 7  HOH HOH A . 
H 5 HOH 7  48 9  HOH HOH A . 
H 5 HOH 8  49 11 HOH HOH A . 
H 5 HOH 9  50 15 HOH HOH A . 
H 5 HOH 10 51 16 HOH HOH A . 
H 5 HOH 11 52 21 HOH HOH A . 
H 5 HOH 12 53 25 HOH HOH A . 
H 5 HOH 13 54 29 HOH HOH A . 
H 5 HOH 14 55 31 HOH HOH A . 
H 5 HOH 15 56 32 HOH HOH A . 
H 5 HOH 16 57 33 HOH HOH A . 
I 5 HOH 1  51 44 HOH HOH B . 
I 5 HOH 2  52 45 HOH HOH B . 
I 5 HOH 3  53 46 HOH HOH B . 
I 5 HOH 4  54 47 HOH HOH B . 
I 5 HOH 5  55 48 HOH HOH B . 
I 5 HOH 6  56 3  HOH HOH B . 
I 5 HOH 7  57 4  HOH HOH B . 
I 5 HOH 8  58 10 HOH HOH B . 
I 5 HOH 9  59 12 HOH HOH B . 
I 5 HOH 10 60 13 HOH HOH B . 
I 5 HOH 11 61 14 HOH HOH B . 
I 5 HOH 12 62 17 HOH HOH B . 
I 5 HOH 13 63 18 HOH HOH B . 
I 5 HOH 14 64 19 HOH HOH B . 
I 5 HOH 15 65 20 HOH HOH B . 
I 5 HOH 16 66 22 HOH HOH B . 
I 5 HOH 17 67 24 HOH HOH B . 
I 5 HOH 18 68 26 HOH HOH B . 
I 5 HOH 19 69 27 HOH HOH B . 
I 5 HOH 20 70 28 HOH HOH B . 
I 5 HOH 21 71 30 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
SOLVE     phasing          .         ? 1 
SHELXL-97 refinement       .         ? 2 
DENZO     'data reduction' .         ? 3 
CCP4      'data scaling'   '(SCALA)' ? 4 
# 
_cell.entry_id           1EG6 
_cell.length_a           29.420 
_cell.length_b           53.440 
_cell.length_c           41.320 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              16 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1EG6 
_symmetry.space_group_name_H-M             'C 2 2 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     orthorhombic 
_symmetry.Int_Tables_number                21 
# 
_exptl.entry_id          1EG6 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_percent_sol   42.71 
_exptl_crystal.density_Matthews      2.15 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, SITTING DROP' 
_exptl_crystal_grow.temp            279 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.5 
_exptl_crystal_grow.pdbx_details    
;DROP: SODIUM CACODYLATE BUFFER, MAGNESIUM ACETATE, COBALT CHLORIDE, SPERMINE, MPD RESERVOIR: MPD, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 279K
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 'SODIUM CACODYLATE' ? ? ? 
1 2 1 'MAGNESIUM ACETATE' ? ? ? 
1 3 1 CoCl3               ? ? ? 
1 4 1 SPERMINE            ? ? ? 
1 5 1 MPD                 ? ? ? 
1 6 2 MPD                 ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   MARRESEARCH 
_diffrn_detector.pdbx_collection_date   1999-12-06 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.9000 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'EMBL/DESY, HAMBURG BEAMLINE X31' 
_diffrn_source.pdbx_synchrotron_site       'EMBL/DESY, HAMBURG' 
_diffrn_source.pdbx_synchrotron_beamline   X31 
_diffrn_source.pdbx_wavelength             0.9000 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     1EG6 
_reflns.observed_criterion_sigma_I   2. 
_reflns.observed_criterion_sigma_F   4. 
_reflns.d_resolution_low             15.00 
_reflns.d_resolution_high            2.00 
_reflns.number_obs                   1566 
_reflns.number_all                   2360 
_reflns.percent_possible_obs         78.8 
_reflns.pdbx_Rmerge_I_obs            0.059 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        8.35 
_reflns.B_iso_Wilson_estimate        29.312 
_reflns.pdbx_redundancy              4.79 
_reflns.R_free_details               ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             2.00 
_reflns_shell.d_res_low              ? 
_reflns_shell.percent_possible_all   72.6 
_reflns_shell.Rmerge_I_obs           0.026 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    ? 
_reflns_shell.pdbx_redundancy        1.29 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 1EG6 
_refine.ls_number_reflns_obs                     1566 
_refine.ls_number_reflns_all                     2091 
_refine.pdbx_ls_sigma_I                          2. 
_refine.pdbx_ls_sigma_F                          4. 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             15.00 
_refine.ls_d_res_high                            2.00 
_refine.ls_percent_reflns_obs                    78.81 
_refine.ls_R_factor_obs                          0.2276 
_refine.ls_R_factor_all                          0.2501 
_refine.ls_R_factor_R_work                       0.2276 
_refine.ls_R_factor_R_free                       0.3469 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 6.6 
_refine.ls_number_reflns_R_free                  104 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       0 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   222 
_refine_hist.pdbx_number_atoms_ligand         50 
_refine_hist.number_atoms_solvent             37 
_refine_hist.number_atoms_total               309 
_refine_hist.d_res_high                       2.00 
_refine_hist.d_res_low                        15.00 
# 
_database_PDB_matrix.entry_id          1EG6 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  1EG6 
_struct.title                     'CRYSTAL STRUCTURE ANALYSIS OF D(CG(5-BRU)ACG) COMPLEXES TO A PHENAZINE' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1EG6 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'DRUG-DNA COMPLEX, INTERCALATION, MAJOR GROOVE BINDING, DOUBLE HELIX, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 3 ? 
E N N 2 ? 
F N N 3 ? 
G N N 4 ? 
H N N 5 ? 
I N N 5 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1EG6 
_struct_ref.pdbx_db_accession          1EG6 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1EG6 A 1 ? 6 ? 1EG6 1 ? 6 ? 1 6 
2 1 1EG6 B 1 ? 6 ? 1EG6 1 ? 6 ? 1 6 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H,I 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG  6 N7 ? ? ? 1_555 C 3CO . CO ? ? A DG  6  A 3CO 40 1_555 ? ? ? ? ? ? ?            2.079 ? ? 
metalc2  metalc ? ? C 3CO . CO ? ? ? 1_555 H HOH . O  ? ? A 3CO 40 A HOH 42 1_555 ? ? ? ? ? ? ?            2.059 ? ? 
metalc3  metalc ? ? C 3CO . CO ? ? ? 1_555 H HOH . O  ? ? A 3CO 40 A HOH 43 1_555 ? ? ? ? ? ? ?            2.111 ? ? 
metalc4  metalc ? ? B DG  2 N7 ? ? ? 1_555 E 3CO . CO ? ? B DG  2  B 3CO 43 1_555 ? ? ? ? ? ? ?            2.064 ? ? 
metalc5  metalc ? ? E 3CO . CO ? ? ? 1_555 I HOH . O  ? ? B 3CO 43 B HOH 51 1_555 ? ? ? ? ? ? ?            2.118 ? ? 
metalc6  metalc ? ? E 3CO . CO ? ? ? 1_555 I HOH . O  ? ? B 3CO 43 B HOH 52 1_555 ? ? ? ? ? ? ?            2.141 ? ? 
metalc7  metalc ? ? E 3CO . CO ? ? ? 1_555 I HOH . O  ? ? B 3CO 43 B HOH 53 1_555 ? ? ? ? ? ? ?            2.105 ? ? 
metalc8  metalc ? ? E 3CO . CO ? ? ? 1_555 I HOH . O  ? ? B 3CO 43 B HOH 54 1_555 ? ? ? ? ? ? ?            2.131 ? ? 
metalc9  metalc ? ? E 3CO . CO ? ? ? 1_555 I HOH . O  ? ? B 3CO 43 B HOH 55 1_555 ? ? ? ? ? ? ?            2.106 ? ? 
hydrog1  hydrog ? ? A DG  2 N1 ? ? ? 1_555 B DC  5 N3 ? ? A DG  2  B DC  5  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ? ? A DG  2 N2 ? ? ? 1_555 B DC  5 O2 ? ? A DG  2  B DC  5  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ? ? A DG  2 O6 ? ? ? 1_555 B DC  5 N4 ? ? A DG  2  B DC  5  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ? ? A DU  3 N3 ? ? ? 1_555 B DA  4 N1 ? ? A DU  3  B DA  4  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ? ? A DU  3 O4 ? ? ? 1_555 B DA  4 N6 ? ? A DU  3  B DA  4  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ? ? A DA  4 N1 ? ? ? 1_555 B DU  3 N3 ? ? A DA  4  B DU  3  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ? ? A DA  4 N6 ? ? ? 1_555 B DU  3 O4 ? ? A DA  4  B DU  3  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ? ? A DC  5 N3 ? ? ? 1_555 B DG  2 N1 ? ? A DC  5  B DG  2  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ? ? A DC  5 N4 ? ? ? 1_555 B DG  2 O6 ? ? A DC  5  B DG  2  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ? ? A DC  5 O2 ? ? ? 1_555 B DG  2 N2 ? ? A DC  5  B DG  2  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  N7 ? A DG  6 ? A DG  6  ? 1_555 CO ? C 3CO . ? A 3CO 40 ? 1_555 O ? H HOH . ? A HOH 42 ? 1_555 81.0  ? 
2  N7 ? A DG  6 ? A DG  6  ? 1_555 CO ? C 3CO . ? A 3CO 40 ? 1_555 O ? H HOH . ? A HOH 43 ? 1_555 90.1  ? 
3  O  ? H HOH . ? A HOH 42 ? 1_555 CO ? C 3CO . ? A 3CO 40 ? 1_555 O ? H HOH . ? A HOH 43 ? 1_555 88.0  ? 
4  N7 ? B DG  2 ? B DG  2  ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 51 ? 1_555 101.0 ? 
5  N7 ? B DG  2 ? B DG  2  ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 52 ? 1_555 100.1 ? 
6  O  ? I HOH . ? B HOH 51 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 52 ? 1_555 157.6 ? 
7  N7 ? B DG  2 ? B DG  2  ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 53 ? 1_555 175.7 ? 
8  O  ? I HOH . ? B HOH 51 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 53 ? 1_555 77.8  ? 
9  O  ? I HOH . ? B HOH 52 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 53 ? 1_555 81.7  ? 
10 N7 ? B DG  2 ? B DG  2  ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 54 ? 1_555 94.7  ? 
11 O  ? I HOH . ? B HOH 51 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 54 ? 1_555 97.9  ? 
12 O  ? I HOH . ? B HOH 52 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 54 ? 1_555 87.7  ? 
13 O  ? I HOH . ? B HOH 53 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 54 ? 1_555 81.5  ? 
14 N7 ? B DG  2 ? B DG  2  ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 55 ? 1_555 75.2  ? 
15 O  ? I HOH . ? B HOH 51 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 55 ? 1_555 99.1  ? 
16 O  ? I HOH . ? B HOH 52 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 55 ? 1_555 79.2  ? 
17 O  ? I HOH . ? B HOH 53 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 55 ? 1_555 109.0 ? 
18 O  ? I HOH . ? B HOH 54 ? 1_555 CO ? E 3CO . ? B 3CO 43 ? 1_555 O ? I HOH . ? B HOH 55 ? 1_555 161.6 ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A 3CO 40 ? 6 'BINDING SITE FOR RESIDUE 3CO A 40' 
AC2 Software B 3CO 43 ? 6 'BINDING SITE FOR RESIDUE 3CO B 43' 
AC3 Software A BR  41 ? 3 'BINDING SITE FOR RESIDUE BR A 41'  
AC4 Software B BR  44 ? 2 'BINDING SITE FOR RESIDUE BR B 44'  
AC5 Software B BFA 50 ? 8 'BINDING SITE FOR RESIDUE BFA B 50' 
1   ?        ? ?   ?  ? ? ?                                   
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 6 DG  A 6 ? DG  A 6  . ? 1_555 ? 
2  AC1 6 DG  A 6 ? DG  A 6  . ? 3_656 ? 
3  AC1 6 HOH H . ? HOH A 42 . ? 3_656 ? 
4  AC1 6 HOH H . ? HOH A 42 . ? 1_555 ? 
5  AC1 6 HOH H . ? HOH A 43 . ? 3_656 ? 
6  AC1 6 HOH H . ? HOH A 43 . ? 1_555 ? 
7  AC2 6 DG  B 2 ? DG  B 2  . ? 1_555 ? 
8  AC2 6 HOH I . ? HOH B 51 . ? 1_555 ? 
9  AC2 6 HOH I . ? HOH B 52 . ? 1_555 ? 
10 AC2 6 HOH I . ? HOH B 53 . ? 1_555 ? 
11 AC2 6 HOH I . ? HOH B 54 . ? 1_555 ? 
12 AC2 6 HOH I . ? HOH B 55 . ? 1_555 ? 
13 AC3 3 DG  A 2 ? DG  A 2  . ? 1_555 ? 
14 AC3 3 DU  A 3 ? DU  A 3  . ? 1_555 ? 
15 AC3 3 HOH H . ? HOH A 49 . ? 1_555 ? 
16 AC4 2 DG  B 2 ? DG  B 2  . ? 1_555 ? 
17 AC4 2 DU  B 3 ? DU  B 3  . ? 1_555 ? 
18 AC5 8 DC  A 1 ? DC  A 1  . ? 3_555 ? 
19 AC5 8 DG  A 2 ? DG  A 2  . ? 1_555 ? 
20 AC5 8 DG  A 2 ? DG  A 2  . ? 2_565 ? 
21 AC5 8 DA  A 4 ? DA  A 4  . ? 2_565 ? 
22 AC5 8 DC  B 5 ? DC  B 5  . ? 1_555 ? 
23 AC5 8 DG  B 6 ? DG  B 6  . ? 1_555 ? 
24 AC5 8 HOH I . ? HOH B 62 . ? 1_555 ? 
25 AC5 8 HOH I . ? HOH B 65 . ? 1_555 ? 
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1 1 C5 A DU 3 ? ? BR A BR 41 ? ? 1.96 
2 1 C5 B DU 3 ? ? BR B BR 44 ? ? 1.96 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 "C1'" A DG 2 ? ? N9    A DG 2 ? ? 1.587 1.488 0.099 0.013 N 
2 1 "O4'" A DU 3 ? ? "C1'" A DU 3 ? ? 1.492 1.420 0.072 0.011 N 
3 1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? 1.488 1.420 0.068 0.011 N 
4 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? 1.494 1.420 0.074 0.011 N 
5 1 "C1'" A DG 6 ? ? N9    A DG 6 ? ? 1.591 1.488 0.103 0.013 N 
6 1 "C1'" B DG 2 ? ? N9    B DG 2 ? ? 1.567 1.488 0.079 0.013 N 
7 1 "O4'" B DU 3 ? ? "C1'" B DU 3 ? ? 1.486 1.420 0.066 0.011 N 
8 1 "C1'" B DG 6 ? ? N9    B DG 6 ? ? 1.569 1.488 0.081 0.013 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 N1    A DC 1 ? ? "C1'" A DC 1 ? ? "C2'" A DC 1 ? ? 123.97 114.30 9.67  1.40 N 
2  1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9    A DG 2 ? ? 102.35 108.00 -5.65 0.70 N 
3  1 P     A DU 3 ? ? "O5'" A DU 3 ? ? "C5'" A DU 3 ? ? 132.22 120.90 11.32 1.60 N 
4  1 "C5'" A DU 3 ? ? "C4'" A DU 3 ? ? "O4'" A DU 3 ? ? 117.17 109.80 7.37  1.10 N 
5  1 C5    A DU 3 ? ? C4    A DU 3 ? ? O4    A DU 3 ? ? 121.85 125.90 -4.05 0.60 N 
6  1 "C3'" A DU 3 ? ? "O3'" A DU 3 ? ? P     A DA 4 ? ? 137.37 119.70 17.67 1.20 Y 
7  1 "O4'" A DA 4 ? ? "C1'" A DA 4 ? ? N9    A DA 4 ? ? 103.35 108.00 -4.65 0.70 N 
8  1 N1    A DC 5 ? ? "C1'" A DC 5 ? ? "C2'" A DC 5 ? ? 128.79 114.30 14.49 1.40 N 
9  1 "C3'" A DC 5 ? ? "O3'" A DC 5 ? ? P     A DG 6 ? ? 128.73 119.70 9.03  1.20 Y 
10 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9    A DG 6 ? ? 100.31 108.00 -7.69 0.70 N 
11 1 N9    B DG 2 ? ? "C1'" B DG 2 ? ? "C2'" B DG 2 ? ? 124.16 114.30 9.86  1.40 N 
12 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9    B DG 2 ? ? 98.48  108.00 -9.52 0.70 N 
13 1 N1    B DU 3 ? ? "C1'" B DU 3 ? ? "C2'" B DU 3 ? ? 130.05 114.30 15.75 1.40 N 
14 1 "C3'" B DU 3 ? ? "O3'" B DU 3 ? ? P     B DA 4 ? ? 129.75 119.70 10.05 1.20 Y 
15 1 N9    B DA 4 ? ? "C1'" B DA 4 ? ? "C2'" B DA 4 ? ? 122.90 114.30 8.60  1.40 N 
16 1 "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9    B DA 4 ? ? 110.16 108.30 1.86  0.30 N 
17 1 C2    B DA 4 ? ? N3    B DA 4 ? ? C4    B DA 4 ? ? 113.93 110.60 3.33  0.50 N 
18 1 "C3'" B DA 4 ? ? "O3'" B DA 4 ? ? P     B DC 5 ? ? 135.41 119.70 15.71 1.20 Y 
19 1 P     B DC 5 ? ? "O5'" B DC 5 ? ? "C5'" B DC 5 ? ? 134.30 120.90 13.40 1.60 N 
20 1 C6    B DC 5 ? ? N1    B DC 5 ? ? C2    B DC 5 ? ? 123.04 120.30 2.74  0.40 N 
21 1 P     B DG 6 ? ? "O5'" B DG 6 ? ? "C5'" B DG 6 ? ? 130.53 120.90 9.63  1.60 N 
# 
_struct_site_keywords.site_id   1 
_struct_site_keywords.text      'INTERCALATION, GROOVE BINDER' 
# 
loop_
_pdbx_struct_special_symmetry.id 
_pdbx_struct_special_symmetry.PDB_model_num 
_pdbx_struct_special_symmetry.auth_asym_id 
_pdbx_struct_special_symmetry.auth_comp_id 
_pdbx_struct_special_symmetry.auth_seq_id 
_pdbx_struct_special_symmetry.PDB_ins_code 
_pdbx_struct_special_symmetry.label_asym_id 
_pdbx_struct_special_symmetry.label_comp_id 
_pdbx_struct_special_symmetry.label_seq_id 
1 1 A 3CO 40 ? C 3CO . 
2 1 B BFA 50 ? G BFA . 
3 1 A HOH 56 ? H HOH . 
# 
_pdbx_unobs_or_zero_occ_residues.id               1 
_pdbx_unobs_or_zero_occ_residues.PDB_model_num    1 
_pdbx_unobs_or_zero_occ_residues.polymer_flag     Y 
_pdbx_unobs_or_zero_occ_residues.occupancy_flag   1 
_pdbx_unobs_or_zero_occ_residues.auth_asym_id     B 
_pdbx_unobs_or_zero_occ_residues.auth_comp_id     DC 
_pdbx_unobs_or_zero_occ_residues.auth_seq_id      1 
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code     ? 
_pdbx_unobs_or_zero_occ_residues.label_asym_id    B 
_pdbx_unobs_or_zero_occ_residues.label_comp_id    DC 
_pdbx_unobs_or_zero_occ_residues.label_seq_id     1 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
3CO CO     CO N N 1   
BFA BR     BR N N 2   
BFA C4     C  Y N 3   
BFA C3     C  Y N 4   
BFA C2     C  Y N 5   
BFA C1     C  Y N 6   
BFA N9     N  Y N 7   
BFA C8     C  Y N 8   
BFA C7     C  Y N 9   
BFA C6     C  Y N 10  
BFA C5     C  Y N 11  
BFA C12    C  Y N 12  
BFA C11    C  Y N 13  
BFA C13    C  Y N 14  
BFA C14    C  Y N 15  
BFA N10    N  Y N 16  
BFA CD1    C  N N 17  
BFA OD1    O  N N 18  
BFA ND1    N  N N 19  
BFA CD2    C  N N 20  
BFA CD3    C  N N 21  
BFA ND2    N  N N 22  
BFA CD7    C  N N 23  
BFA CD8    C  N N 24  
BFA H3     H  N N 25  
BFA H2     H  N N 26  
BFA H1     H  N N 27  
BFA H8     H  N N 28  
BFA H7     H  N N 29  
BFA H6     H  N N 30  
BFA HN1    H  N N 31  
BFA HD21   H  N N 32  
BFA HD22   H  N N 33  
BFA HD31   H  N N 34  
BFA HD32   H  N N 35  
BFA HD71   H  N N 36  
BFA HD72   H  N N 37  
BFA HD73   H  N N 38  
BFA HD81   H  N N 39  
BFA HD82   H  N N 40  
BFA HD83   H  N N 41  
BR  BR     BR N N 42  
DA  OP3    O  N N 43  
DA  P      P  N N 44  
DA  OP1    O  N N 45  
DA  OP2    O  N N 46  
DA  "O5'"  O  N N 47  
DA  "C5'"  C  N N 48  
DA  "C4'"  C  N R 49  
DA  "O4'"  O  N N 50  
DA  "C3'"  C  N S 51  
DA  "O3'"  O  N N 52  
DA  "C2'"  C  N N 53  
DA  "C1'"  C  N R 54  
DA  N9     N  Y N 55  
DA  C8     C  Y N 56  
DA  N7     N  Y N 57  
DA  C5     C  Y N 58  
DA  C6     C  Y N 59  
DA  N6     N  N N 60  
DA  N1     N  Y N 61  
DA  C2     C  Y N 62  
DA  N3     N  Y N 63  
DA  C4     C  Y N 64  
DA  HOP3   H  N N 65  
DA  HOP2   H  N N 66  
DA  "H5'"  H  N N 67  
DA  "H5''" H  N N 68  
DA  "H4'"  H  N N 69  
DA  "H3'"  H  N N 70  
DA  "HO3'" H  N N 71  
DA  "H2'"  H  N N 72  
DA  "H2''" H  N N 73  
DA  "H1'"  H  N N 74  
DA  H8     H  N N 75  
DA  H61    H  N N 76  
DA  H62    H  N N 77  
DA  H2     H  N N 78  
DC  OP3    O  N N 79  
DC  P      P  N N 80  
DC  OP1    O  N N 81  
DC  OP2    O  N N 82  
DC  "O5'"  O  N N 83  
DC  "C5'"  C  N N 84  
DC  "C4'"  C  N R 85  
DC  "O4'"  O  N N 86  
DC  "C3'"  C  N S 87  
DC  "O3'"  O  N N 88  
DC  "C2'"  C  N N 89  
DC  "C1'"  C  N R 90  
DC  N1     N  N N 91  
DC  C2     C  N N 92  
DC  O2     O  N N 93  
DC  N3     N  N N 94  
DC  C4     C  N N 95  
DC  N4     N  N N 96  
DC  C5     C  N N 97  
DC  C6     C  N N 98  
DC  HOP3   H  N N 99  
DC  HOP2   H  N N 100 
DC  "H5'"  H  N N 101 
DC  "H5''" H  N N 102 
DC  "H4'"  H  N N 103 
DC  "H3'"  H  N N 104 
DC  "HO3'" H  N N 105 
DC  "H2'"  H  N N 106 
DC  "H2''" H  N N 107 
DC  "H1'"  H  N N 108 
DC  H41    H  N N 109 
DC  H42    H  N N 110 
DC  H5     H  N N 111 
DC  H6     H  N N 112 
DG  OP3    O  N N 113 
DG  P      P  N N 114 
DG  OP1    O  N N 115 
DG  OP2    O  N N 116 
DG  "O5'"  O  N N 117 
DG  "C5'"  C  N N 118 
DG  "C4'"  C  N R 119 
DG  "O4'"  O  N N 120 
DG  "C3'"  C  N S 121 
DG  "O3'"  O  N N 122 
DG  "C2'"  C  N N 123 
DG  "C1'"  C  N R 124 
DG  N9     N  Y N 125 
DG  C8     C  Y N 126 
DG  N7     N  Y N 127 
DG  C5     C  Y N 128 
DG  C6     C  N N 129 
DG  O6     O  N N 130 
DG  N1     N  N N 131 
DG  C2     C  N N 132 
DG  N2     N  N N 133 
DG  N3     N  N N 134 
DG  C4     C  Y N 135 
DG  HOP3   H  N N 136 
DG  HOP2   H  N N 137 
DG  "H5'"  H  N N 138 
DG  "H5''" H  N N 139 
DG  "H4'"  H  N N 140 
DG  "H3'"  H  N N 141 
DG  "HO3'" H  N N 142 
DG  "H2'"  H  N N 143 
DG  "H2''" H  N N 144 
DG  "H1'"  H  N N 145 
DG  H8     H  N N 146 
DG  H1     H  N N 147 
DG  H21    H  N N 148 
DG  H22    H  N N 149 
DU  OP3    O  N N 150 
DU  P      P  N N 151 
DU  OP1    O  N N 152 
DU  OP2    O  N N 153 
DU  "O5'"  O  N N 154 
DU  "C5'"  C  N N 155 
DU  "C4'"  C  N R 156 
DU  "O4'"  O  N N 157 
DU  "C3'"  C  N S 158 
DU  "O3'"  O  N N 159 
DU  "C2'"  C  N N 160 
DU  "C1'"  C  N R 161 
DU  N1     N  N N 162 
DU  C2     C  N N 163 
DU  O2     O  N N 164 
DU  N3     N  N N 165 
DU  C4     C  N N 166 
DU  O4     O  N N 167 
DU  C5     C  N N 168 
DU  C6     C  N N 169 
DU  HOP3   H  N N 170 
DU  HOP2   H  N N 171 
DU  "H5'"  H  N N 172 
DU  "H5''" H  N N 173 
DU  "H4'"  H  N N 174 
DU  "H3'"  H  N N 175 
DU  "HO3'" H  N N 176 
DU  "H2'"  H  N N 177 
DU  "H2''" H  N N 178 
DU  "H1'"  H  N N 179 
DU  H3     H  N N 180 
DU  H5     H  N N 181 
DU  H6     H  N N 182 
HOH O      O  N N 183 
HOH H1     H  N N 184 
HOH H2     H  N N 185 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BFA BR    C5     sing N N 1   
BFA C4    C3     doub Y N 2   
BFA C4    C12    sing Y N 3   
BFA C4    CD1    sing N N 4   
BFA C3    C2     sing Y N 5   
BFA C3    H3     sing N N 6   
BFA C2    C1     doub Y N 7   
BFA C2    H2     sing N N 8   
BFA C1    C11    sing Y N 9   
BFA C1    H1     sing N N 10  
BFA N9    C11    doub Y N 11  
BFA N9    C13    sing Y N 12  
BFA C8    C7     doub Y N 13  
BFA C8    C13    sing Y N 14  
BFA C8    H8     sing N N 15  
BFA C7    C6     sing Y N 16  
BFA C7    H7     sing N N 17  
BFA C6    C5     doub Y N 18  
BFA C6    H6     sing N N 19  
BFA C5    C14    sing Y N 20  
BFA C12   C11    sing Y N 21  
BFA C12   N10    doub Y N 22  
BFA C13   C14    doub Y N 23  
BFA C14   N10    sing Y N 24  
BFA CD1   OD1    doub N N 25  
BFA CD1   ND1    sing N N 26  
BFA ND1   CD2    sing N N 27  
BFA ND1   HN1    sing N N 28  
BFA CD2   CD3    sing N N 29  
BFA CD2   HD21   sing N N 30  
BFA CD2   HD22   sing N N 31  
BFA CD3   ND2    sing N N 32  
BFA CD3   HD31   sing N N 33  
BFA CD3   HD32   sing N N 34  
BFA ND2   CD7    sing N N 35  
BFA ND2   CD8    sing N N 36  
BFA CD7   HD71   sing N N 37  
BFA CD7   HD72   sing N N 38  
BFA CD7   HD73   sing N N 39  
BFA CD8   HD81   sing N N 40  
BFA CD8   HD82   sing N N 41  
BFA CD8   HD83   sing N N 42  
DA  OP3   P      sing N N 43  
DA  OP3   HOP3   sing N N 44  
DA  P     OP1    doub N N 45  
DA  P     OP2    sing N N 46  
DA  P     "O5'"  sing N N 47  
DA  OP2   HOP2   sing N N 48  
DA  "O5'" "C5'"  sing N N 49  
DA  "C5'" "C4'"  sing N N 50  
DA  "C5'" "H5'"  sing N N 51  
DA  "C5'" "H5''" sing N N 52  
DA  "C4'" "O4'"  sing N N 53  
DA  "C4'" "C3'"  sing N N 54  
DA  "C4'" "H4'"  sing N N 55  
DA  "O4'" "C1'"  sing N N 56  
DA  "C3'" "O3'"  sing N N 57  
DA  "C3'" "C2'"  sing N N 58  
DA  "C3'" "H3'"  sing N N 59  
DA  "O3'" "HO3'" sing N N 60  
DA  "C2'" "C1'"  sing N N 61  
DA  "C2'" "H2'"  sing N N 62  
DA  "C2'" "H2''" sing N N 63  
DA  "C1'" N9     sing N N 64  
DA  "C1'" "H1'"  sing N N 65  
DA  N9    C8     sing Y N 66  
DA  N9    C4     sing Y N 67  
DA  C8    N7     doub Y N 68  
DA  C8    H8     sing N N 69  
DA  N7    C5     sing Y N 70  
DA  C5    C6     sing Y N 71  
DA  C5    C4     doub Y N 72  
DA  C6    N6     sing N N 73  
DA  C6    N1     doub Y N 74  
DA  N6    H61    sing N N 75  
DA  N6    H62    sing N N 76  
DA  N1    C2     sing Y N 77  
DA  C2    N3     doub Y N 78  
DA  C2    H2     sing N N 79  
DA  N3    C4     sing Y N 80  
DC  OP3   P      sing N N 81  
DC  OP3   HOP3   sing N N 82  
DC  P     OP1    doub N N 83  
DC  P     OP2    sing N N 84  
DC  P     "O5'"  sing N N 85  
DC  OP2   HOP2   sing N N 86  
DC  "O5'" "C5'"  sing N N 87  
DC  "C5'" "C4'"  sing N N 88  
DC  "C5'" "H5'"  sing N N 89  
DC  "C5'" "H5''" sing N N 90  
DC  "C4'" "O4'"  sing N N 91  
DC  "C4'" "C3'"  sing N N 92  
DC  "C4'" "H4'"  sing N N 93  
DC  "O4'" "C1'"  sing N N 94  
DC  "C3'" "O3'"  sing N N 95  
DC  "C3'" "C2'"  sing N N 96  
DC  "C3'" "H3'"  sing N N 97  
DC  "O3'" "HO3'" sing N N 98  
DC  "C2'" "C1'"  sing N N 99  
DC  "C2'" "H2'"  sing N N 100 
DC  "C2'" "H2''" sing N N 101 
DC  "C1'" N1     sing N N 102 
DC  "C1'" "H1'"  sing N N 103 
DC  N1    C2     sing N N 104 
DC  N1    C6     sing N N 105 
DC  C2    O2     doub N N 106 
DC  C2    N3     sing N N 107 
DC  N3    C4     doub N N 108 
DC  C4    N4     sing N N 109 
DC  C4    C5     sing N N 110 
DC  N4    H41    sing N N 111 
DC  N4    H42    sing N N 112 
DC  C5    C6     doub N N 113 
DC  C5    H5     sing N N 114 
DC  C6    H6     sing N N 115 
DG  OP3   P      sing N N 116 
DG  OP3   HOP3   sing N N 117 
DG  P     OP1    doub N N 118 
DG  P     OP2    sing N N 119 
DG  P     "O5'"  sing N N 120 
DG  OP2   HOP2   sing N N 121 
DG  "O5'" "C5'"  sing N N 122 
DG  "C5'" "C4'"  sing N N 123 
DG  "C5'" "H5'"  sing N N 124 
DG  "C5'" "H5''" sing N N 125 
DG  "C4'" "O4'"  sing N N 126 
DG  "C4'" "C3'"  sing N N 127 
DG  "C4'" "H4'"  sing N N 128 
DG  "O4'" "C1'"  sing N N 129 
DG  "C3'" "O3'"  sing N N 130 
DG  "C3'" "C2'"  sing N N 131 
DG  "C3'" "H3'"  sing N N 132 
DG  "O3'" "HO3'" sing N N 133 
DG  "C2'" "C1'"  sing N N 134 
DG  "C2'" "H2'"  sing N N 135 
DG  "C2'" "H2''" sing N N 136 
DG  "C1'" N9     sing N N 137 
DG  "C1'" "H1'"  sing N N 138 
DG  N9    C8     sing Y N 139 
DG  N9    C4     sing Y N 140 
DG  C8    N7     doub Y N 141 
DG  C8    H8     sing N N 142 
DG  N7    C5     sing Y N 143 
DG  C5    C6     sing N N 144 
DG  C5    C4     doub Y N 145 
DG  C6    O6     doub N N 146 
DG  C6    N1     sing N N 147 
DG  N1    C2     sing N N 148 
DG  N1    H1     sing N N 149 
DG  C2    N2     sing N N 150 
DG  C2    N3     doub N N 151 
DG  N2    H21    sing N N 152 
DG  N2    H22    sing N N 153 
DG  N3    C4     sing N N 154 
DU  OP3   P      sing N N 155 
DU  OP3   HOP3   sing N N 156 
DU  P     OP1    doub N N 157 
DU  P     OP2    sing N N 158 
DU  P     "O5'"  sing N N 159 
DU  OP2   HOP2   sing N N 160 
DU  "O5'" "C5'"  sing N N 161 
DU  "C5'" "C4'"  sing N N 162 
DU  "C5'" "H5'"  sing N N 163 
DU  "C5'" "H5''" sing N N 164 
DU  "C4'" "O4'"  sing N N 165 
DU  "C4'" "C3'"  sing N N 166 
DU  "C4'" "H4'"  sing N N 167 
DU  "O4'" "C1'"  sing N N 168 
DU  "C3'" "O3'"  sing N N 169 
DU  "C3'" "C2'"  sing N N 170 
DU  "C3'" "H3'"  sing N N 171 
DU  "O3'" "HO3'" sing N N 172 
DU  "C2'" "C1'"  sing N N 173 
DU  "C2'" "H2'"  sing N N 174 
DU  "C2'" "H2''" sing N N 175 
DU  "C1'" N1     sing N N 176 
DU  "C1'" "H1'"  sing N N 177 
DU  N1    C2     sing N N 178 
DU  N1    C6     sing N N 179 
DU  C2    O2     doub N N 180 
DU  C2    N3     sing N N 181 
DU  N3    C4     sing N N 182 
DU  N3    H3     sing N N 183 
DU  C4    O4     doub N N 184 
DU  C4    C5     sing N N 185 
DU  C5    C6     doub N N 186 
DU  C5    H5     sing N N 187 
DU  C6    H6     sing N N 188 
HOH O     H1     sing N N 189 
HOH O     H2     sing N N 190 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
1EG6 'double helix'        
1EG6 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 2 1_555 B DC 5 1_555 -0.642 -0.057 -0.246 -8.892 3.297  9.981  1 A_DG2:DC5_B A 2 ? B 5 ? 19 1 
1 A DU 3 1_555 B DA 4 1_555 0.071  -0.035 -0.352 3.861  2.658  -0.991 2 A_DU3:DA4_B A 3 ? B 4 ? 20 1 
1 A DA 4 1_555 B DU 3 1_555 0.047  0.069  0.137  -3.117 -0.497 5.705  3 A_DA4:DU3_B A 4 ? B 3 ? 20 1 
1 A DC 5 1_555 B DG 2 1_555 0.344  -0.161 -0.175 9.797  9.877  -0.488 4 A_DC5:DG2_B A 5 ? B 2 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 2 1_555 B DC 5 1_555 A DU 3 1_555 B DA 4 1_555 -1.174 -0.340 3.025 1.478  5.491 28.797 -1.743 2.606  2.850 10.908 -2.937 
29.341 1 AA_DG2DU3:DA4DC5_BB A 2 ? B 5 ? A 3 ? B 4 ? 
1 A DU 3 1_555 B DA 4 1_555 A DA 4 1_555 B DU 3 1_555 0.198  -0.568 3.364 -5.220 1.549 37.199 -1.088 -1.002 3.282 2.412  8.129  
37.581 2 AA_DU3DA4:DU3DA4_BB A 3 ? B 4 ? A 4 ? B 3 ? 
1 A DA 4 1_555 B DU 3 1_555 A DC 5 1_555 B DG 2 1_555 0.091  -0.259 3.209 3.556  2.971 25.810 -1.356 0.740  3.144 6.583  -7.880 
26.215 3 AA_DA4DC5:DG2DU3_BB A 4 ? B 3 ? A 5 ? B 2 ? 
# 
_atom_sites.entry_id                    1EG6 
_atom_sites.fract_transf_matrix[1][1]   0.033990 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.018713 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.024201 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
BR 
C  
CO 
N  
O  
P  
# 
loop_