data_1ENE # _entry.id 1ENE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ENE pdb_00001ene 10.2210/pdb1ene/pdb NDB BD0036 ? ? RCSB RCSB010745 ? ? WWPDB D_1000010745 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-09-25 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_alt_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 25 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr1_symmetry' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_conn.ptnr2_symmetry' 40 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 1ENE _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2000-03-21 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type NDB BD0033 . unspecified NDB BD0034 . unspecified NDB BD0035 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chiu, T.K.' 1 'Dickerson, R.E.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary '1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium.' J.Mol.Biol. 301 915 945 2000 JMOBAK UK 0022-2836 0070 ? 10966796 10.1006/jmbi.2000.4012 1 'Absence of minor groove monovalent cations in the crosslinked dodecamer CGCGAATTCGCG' J.Mol.Biol. 292 589 608 1999 JMOBAK UK 0022-2836 0070 ? ? 10.1006/jmbi.1999.3075 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chiu, T.K.' 1 ? primary 'Dickerson, R.E.' 2 ? 1 'Chiu, T.K.' 3 ? 1 'Kaczor-Grzeskowiak, M.' 4 ? 1 'Dickerson, R.E.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3') ; 3045.992 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 5 ? ? ? ? 3 non-polymer syn ETHANOL 46.068 3 ? ? ? ? 4 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DA)(DG)(DC)(DG)(DC)(DT)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCAGCGCTGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 ETHANOL EOH 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DG n 1 5 DC n 1 6 DG n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 111 111 CA 543 A . C 2 CA 1 112 112 CA OC7 A . D 2 CA 1 113 113 CA OC5 A . E 2 CA 1 1113 1113 CA OC6 A . F 2 CA 1 114 114 CA OC3 A . G 3 EOH 1 1114 111 EOH 543 A . H 3 EOH 1 227 227 EOH EOH A . I 3 EOH 1 244 244 EOH EOH A . J 4 HOH 1 201 201 HOH HOH A . J 4 HOH 2 202 202 HOH HOH A . J 4 HOH 3 203 203 HOH HOH A . J 4 HOH 4 204 204 HOH HOH A . J 4 HOH 5 205 205 HOH HOH A . J 4 HOH 6 206 206 HOH HOH A . J 4 HOH 7 207 207 HOH HOH A . J 4 HOH 8 208 208 HOH HOH A . J 4 HOH 9 209 209 HOH HOH A . J 4 HOH 10 210 210 HOH HOH A . J 4 HOH 11 211 211 HOH HOH A . J 4 HOH 12 212 212 HOH HOH A . J 4 HOH 13 214 214 HOH HOH A . J 4 HOH 14 215 215 HOH HOH A . J 4 HOH 15 216 216 HOH HOH A . J 4 HOH 16 217 217 HOH HOH A . J 4 HOH 17 218 218 HOH HOH A . J 4 HOH 18 219 219 HOH HOH A . J 4 HOH 19 221 221 HOH HOH A . J 4 HOH 20 222 222 HOH HOH A . J 4 HOH 21 224 224 HOH HOH A . J 4 HOH 22 225 225 HOH HOH A . J 4 HOH 23 226 226 HOH HOH A . J 4 HOH 24 228 228 HOH HOH A . J 4 HOH 25 229 229 HOH HOH A . J 4 HOH 26 230 230 HOH HOH A . J 4 HOH 27 231 231 HOH HOH A . J 4 HOH 28 233 233 HOH HOH A . J 4 HOH 29 234 234 HOH HOH A . J 4 HOH 30 235 235 HOH HOH A . J 4 HOH 31 236 236 HOH HOH A . J 4 HOH 32 237 237 HOH HOH A . J 4 HOH 33 238 238 HOH HOH A . J 4 HOH 34 240 240 HOH HOH A . J 4 HOH 35 241 241 HOH HOH A . J 4 HOH 36 243 243 HOH HOH A . J 4 HOH 37 248 248 HOH HOH A . J 4 HOH 38 249 249 HOH HOH A . J 4 HOH 39 250 250 HOH HOH A . J 4 HOH 40 252 252 HOH HOH A . J 4 HOH 41 253 253 HOH HOH A . J 4 HOH 42 256 256 HOH HOH A . J 4 HOH 43 259 259 HOH HOH A . J 4 HOH 44 260 260 HOH HOH A . J 4 HOH 45 262 262 HOH HOH A . J 4 HOH 46 265 265 HOH HOH A . J 4 HOH 47 267 267 HOH HOH A . J 4 HOH 48 287 287 HOH HOH A . J 4 HOH 49 1229 1229 HOH HOH A . J 4 HOH 50 1244 1244 HOH HOH A . J 4 HOH 51 1249 1249 HOH HOH A . J 4 HOH 52 1251 1251 HOH HOH A . J 4 HOH 53 1258 1258 HOH HOH A . J 4 HOH 54 1276 1276 HOH HOH A . J 4 HOH 55 1280 1280 HOH HOH A . J 4 HOH 56 1283 1283 HOH HOH A . J 4 HOH 57 1301 1301 HOH HOH A . J 4 HOH 58 1320 1320 HOH HOH A . J 4 HOH 59 1342 1342 HOH HOH A . J 4 HOH 60 1343 1343 HOH HOH A . J 4 HOH 61 1356 1356 HOH HOH A . J 4 HOH 62 1358 1358 HOH HOH A . J 4 HOH 63 1359 111 HOH 543 A . J 4 HOH 64 1360 111 HOH 543 A . J 4 HOH 65 1361 111 HOH 543 A . J 4 HOH 66 1362 111 HOH 543 A . J 4 HOH 67 1363 111 HOH 543 A . J 4 HOH 68 1364 111 HOH 543 A . J 4 HOH 69 1365 112 HOH OC7 A . J 4 HOH 70 1366 112 HOH OC7 A . J 4 HOH 71 1367 112 HOH OC7 A . J 4 HOH 72 1368 112 HOH OC7 A . J 4 HOH 73 1369 112 HOH OC7 A . J 4 HOH 74 1370 112 HOH OC7 A . J 4 HOH 75 1371 112 HOH OC7 A . J 4 HOH 76 1372 113 HOH OC5 A . J 4 HOH 77 1373 113 HOH OC5 A . J 4 HOH 78 1374 113 HOH OC5 A . J 4 HOH 79 1375 113 HOH OC5 A . J 4 HOH 80 1376 113 HOH OC5 A . J 4 HOH 81 1377 1113 HOH OC6 A . J 4 HOH 82 1378 1113 HOH OC6 A . J 4 HOH 83 1379 1113 HOH OC6 A . J 4 HOH 84 1380 1113 HOH OC6 A . J 4 HOH 85 1381 1113 HOH OC6 A . J 4 HOH 86 1382 1113 HOH OC6 A . J 4 HOH 87 1383 114 HOH OC3 A . J 4 HOH 88 1384 114 HOH OC3 A . J 4 HOH 89 1385 114 HOH OC3 A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1ENE _cell.length_a 31.750 _cell.length_b 25.725 _cell.length_c 34.088 _cell.angle_alpha 90.00 _cell.angle_beta 116.88 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ENE _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 # _exptl.entry_id 1ENE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 36.80 _exptl_crystal.density_Matthews 2.06 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 275.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;initial concentrations in droplet: 0.17 mM dna, 61.20 mM calcium acetate, 10-15% MPD, 30% final MPD concentration in reservoir. Solutions were unbuffered, VAPOR DIFFUSION, SITTING DROP, temperature 275.0K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'calcium acetate' ? ? ? 1 2 1 streptonigrin ? ? ? 1 3 1 MPD ? ? ? 1 4 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-11-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9500 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X8C' _diffrn_source.pdbx_wavelength 0.9500 _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X8C _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ENE _reflns.observed_criterion_sigma_I -1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8.0 _reflns.d_resolution_high 0.985 _reflns.number_obs 13423 _reflns.number_all 13423 _reflns.percent_possible_obs 95.5 _reflns.pdbx_Rmerge_I_obs 0.0320000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.7 _reflns.B_iso_Wilson_estimate 4.41 _reflns.pdbx_redundancy 4.65 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 0.985 _reflns_shell.d_res_low 1.016 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 91.5 _reflns_shell.Rmerge_I_obs 0.0900000 _reflns_shell.meanI_over_sigI_obs 9.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all 1279 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ENE _refine.ls_number_reflns_obs 13423 _refine.ls_number_reflns_all 13423 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 0.985 _refine.ls_percent_reflns_obs 95.5 _refine.ls_R_factor_obs 0.1214000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1214000 _refine.ls_R_factor_R_free 0.1477000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 665 _refine.ls_number_parameters 16552 _refine.ls_number_restraints 4814 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'SHELX swat option' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;REFINEMENT STARTED IN X-PLOR 3.843 WITH IDEAL B-DNA FITTED ONTO BDJ019. AFTER ALL DATA HAS BEEN ADDED AND REFINED BY SIMULATED ANNEALING IN X-PLOR 3.843, REFINEMENT CONTINUED BY CONJUGATE GRADIENT LEAST-SQUARES IN SHELXL-97. THE TOP 50 MOST DISAGREEABLE REFLECTIONS WERE REJECTED TOWARDS THE LATTER STAGES OF REFINEMENT BUT THESE ARE STILL INCLUDED IN THE RELEASED DATA. ; _refine.pdbx_starting_model BDJ019 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Parkinson et al.' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ENE _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 13 _refine_analyze.occupancy_sum_hydrogen 113 _refine_analyze.occupancy_sum_non_hydrogen 276.5 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 351 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 76 _refine_hist.number_atoms_total 477 _refine_hist.d_res_high 0.985 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.018 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.048 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.286 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.026 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.035 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1ENE _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1200000 _pdbx_refine.free_R_factor_4sig_cutoff 0.1470000 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 654 _pdbx_refine.number_reflns_obs_4sig_cutoff 13004 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1ENE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1ENE _struct.title '1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ENE _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'divalent cations, DNA sequence-specific binding, shelxdna, B-DNA, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1ENE _struct_ref.pdbx_db_accession 1ENE _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1ENE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1ENE _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 16.3380180286 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.4049758380 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 9 N7 ? ? ? 2_656 D CA . CA C ? A DG 9 A CA 113 1_555 ? ? ? ? ? ? ? 2.712 ? ? metalc2 metalc ? ? A DG 10 O6 ? ? ? 2_656 D CA . CA C ? A DG 10 A CA 113 1_555 ? ? ? ? ? ? ? 2.638 ? ? metalc3 metalc ? ? B CA . CA C ? ? 1_555 G EOH . O C ? A CA 111 A EOH 1114 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc4 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1359 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc5 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1360 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc6 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1360 2_655 ? ? ? ? ? ? ? 3.387 ? ? metalc7 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1361 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc8 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1362 1_555 ? ? ? ? ? ? ? 2.434 ? ? metalc9 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1363 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc10 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1363 2_655 ? ? ? ? ? ? ? 2.312 ? ? metalc11 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1364 1_555 ? ? ? ? ? ? ? 2.397 ? ? metalc12 metalc ? ? B CA . CA C ? ? 1_555 J HOH . O C ? A CA 111 A HOH 1364 2_655 ? ? ? ? ? ? ? 2.853 ? ? metalc13 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1365 1_555 ? ? ? ? ? ? ? 2.458 ? ? metalc14 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1365 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc15 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1366 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc16 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1366 1_555 ? ? ? ? ? ? ? 2.417 ? ? metalc17 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1367 1_555 ? ? ? ? ? ? ? 2.444 ? ? metalc18 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1367 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc19 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1368 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc20 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1368 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc21 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1369 1_555 ? ? ? ? ? ? ? 2.440 ? ? metalc22 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1369 1_555 ? ? ? ? ? ? ? 2.417 ? ? metalc23 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1370 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc24 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1370 1_555 ? ? ? ? ? ? ? 2.410 ? ? metalc25 metalc ? ? C CA . CA C ? ? 1_555 J HOH . O C ? A CA 112 A HOH 1371 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc26 metalc ? ? C CA . CA D ? ? 1_555 J HOH . O D ? A CA 112 A HOH 1371 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc27 metalc ? ? D CA . CA C ? ? 1_555 J HOH . O C ? A CA 113 A HOH 1372 1_555 ? ? ? ? ? ? ? 2.464 ? ? metalc28 metalc ? ? D CA . CA C ? ? 1_555 J HOH . O C ? A CA 113 A HOH 1373 1_555 ? ? ? ? ? ? ? 2.415 ? ? metalc29 metalc ? ? D CA . CA C ? ? 1_555 J HOH . O C ? A CA 113 A HOH 1373 2_655 ? ? ? ? ? ? ? 3.197 ? ? metalc30 metalc ? ? D CA . CA C ? ? 1_555 J HOH . O C ? A CA 113 A HOH 1374 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc31 metalc ? ? D CA . CA C ? ? 1_555 J HOH . O C ? A CA 113 A HOH 1375 1_555 ? ? ? ? ? ? ? 2.464 ? ? metalc32 metalc ? ? D CA . CA C ? ? 1_555 J HOH . O C ? A CA 113 A HOH 1376 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc33 metalc ? ? F CA . CA B ? ? 1_555 J HOH . O B ? A CA 114 A HOH 1383 1_555 ? ? ? ? ? ? ? 2.406 ? ? metalc34 metalc ? ? F CA . CA B ? ? 1_555 J HOH . O B ? A CA 114 A HOH 1384 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc35 metalc ? ? F CA . CA B ? ? 1_555 J HOH . O B ? A CA 114 A HOH 1385 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc36 metalc ? ? E CA . CA D ? ? 1_555 J HOH . O D ? A CA 1113 A HOH 1377 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc37 metalc ? ? E CA . CA E ? ? 1_555 J HOH . O E ? A CA 1113 A HOH 1377 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc38 metalc ? ? E CA . CA D ? ? 1_555 J HOH . O D ? A CA 1113 A HOH 1378 1_555 ? ? ? ? ? ? ? 2.462 ? ? metalc39 metalc ? ? E CA . CA E ? ? 1_555 J HOH . O E ? A CA 1113 A HOH 1378 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc40 metalc ? ? E CA . CA D ? ? 1_555 J HOH . O D ? A CA 1113 A HOH 1379 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc41 metalc ? ? E CA . CA E ? ? 1_555 J HOH . O E ? A CA 1113 A HOH 1379 1_555 ? ? ? ? ? ? ? 2.448 ? ? metalc42 metalc ? ? E CA . CA D ? ? 1_555 J HOH . O D ? A CA 1113 A HOH 1380 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc43 metalc ? ? E CA . CA E ? ? 1_555 J HOH . O E ? A CA 1113 A HOH 1380 1_555 ? ? ? ? ? ? ? 2.444 ? ? metalc44 metalc ? ? E CA . CA D ? ? 1_555 J HOH . O D ? A CA 1113 A HOH 1381 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc45 metalc ? ? E CA . CA E ? ? 1_555 J HOH . O E ? A CA 1113 A HOH 1381 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc46 metalc ? ? E CA . CA D ? ? 1_555 J HOH . O D ? A CA 1113 A HOH 1382 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc47 metalc ? ? E CA . CA E ? ? 1_555 J HOH . O E ? A CA 1113 A HOH 1382 1_555 ? ? ? ? ? ? ? 2.440 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 10 N1 ? ? A DC 1 A DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 1 A DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 10 N2 ? ? A DC 1 A DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 3 A DT 8 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 3 A DT 8 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 5 A DG 6 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 5 A DG 6 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 5 A DG 6 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 6 A DC 5 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 6 A DC 5 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 6 A DC 5 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 3 N1 ? ? A DT 8 A DA 3 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 3 N6 ? ? A DT 8 A DA 3 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 10 A DC 1 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 10 A DC 1 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 10 A DC 1 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 2_656 78.0 ? 2 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1372 ? 1_555 81.2 ? 3 O6 ? A DG 10 ? A DG 10 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1372 ? 1_555 90.7 ? 4 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 1_555 140.0 ? 5 O6 ? A DG 10 ? A DG 10 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 1_555 62.1 ? 6 O C J HOH . ? A HOH 1372 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 1_555 95.4 ? 7 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 2_655 122.5 ? 8 O6 ? A DG 10 ? A DG 10 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 2_655 58.0 ? 9 O C J HOH . ? A HOH 1372 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 2_655 129.4 ? 10 O C J HOH . ? A HOH 1373 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1373 ? 2_655 36.5 ? 11 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1374 ? 1_555 143.9 ? 12 O6 ? A DG 10 ? A DG 10 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1374 ? 1_555 134.3 ? 13 O C J HOH . ? A HOH 1372 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1374 ? 1_555 82.6 ? 14 O C J HOH . ? A HOH 1373 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1374 ? 1_555 73.6 ? 15 O C J HOH . ? A HOH 1373 ? 2_655 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1374 ? 1_555 92.6 ? 16 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1375 ? 1_555 90.6 ? 17 O6 ? A DG 10 ? A DG 10 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1375 ? 1_555 82.8 ? 18 O C J HOH . ? A HOH 1372 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1375 ? 1_555 170.5 ? 19 O C J HOH . ? A HOH 1373 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1375 ? 1_555 87.8 ? 20 O C J HOH . ? A HOH 1373 ? 2_655 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1375 ? 1_555 51.9 ? 21 O C J HOH . ? A HOH 1374 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1375 ? 1_555 106.9 ? 22 N7 ? A DG 9 ? A DG 9 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 73.9 ? 23 O6 ? A DG 10 ? A DG 10 ? 2_656 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 149.7 ? 24 O C J HOH . ? A HOH 1372 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 96.2 ? 25 O C J HOH . ? A HOH 1373 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 145.7 ? 26 O C J HOH . ? A HOH 1373 ? 2_655 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 131.5 ? 27 O C J HOH . ? A HOH 1374 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 76.0 ? 28 O C J HOH . ? A HOH 1375 ? 1_555 CA C D CA . ? A CA 113 ? 1_555 O C J HOH . ? A HOH 1376 ? 1_555 86.1 ? 29 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1359 ? 1_555 113.9 ? 30 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1360 ? 1_555 93.3 ? 31 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1360 ? 1_555 130.2 ? 32 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1360 ? 2_655 82.9 ? 33 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1360 ? 2_655 51.5 ? 34 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1360 ? 2_655 95.3 ? 35 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1361 ? 1_555 82.0 ? 36 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1361 ? 1_555 145.9 ? 37 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1361 ? 1_555 75.0 ? 38 O C J HOH . ? A HOH 1360 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1361 ? 1_555 161.5 ? 39 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1362 ? 1_555 77.7 ? 40 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1362 ? 1_555 77.2 ? 41 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1362 ? 1_555 151.8 ? 42 O C J HOH . ? A HOH 1360 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1362 ? 1_555 109.7 ? 43 O C J HOH . ? A HOH 1361 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1362 ? 1_555 77.3 ? 44 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 1_555 72.9 ? 45 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 1_555 74.2 ? 46 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 1_555 75.4 ? 47 O C J HOH . ? A HOH 1360 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 1_555 23.1 ? 48 O C J HOH . ? A HOH 1361 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 1_555 139.7 ? 49 O C J HOH . ? A HOH 1362 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 1_555 125.3 ? 50 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 94.5 ? 51 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 97.7 ? 52 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 36.5 ? 53 O C J HOH . ? A HOH 1360 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 59.4 ? 54 O C J HOH . ? A HOH 1361 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 111.4 ? 55 O C J HOH . ? A HOH 1362 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 167.7 ? 56 O C J HOH . ? A HOH 1363 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1363 ? 2_655 42.6 ? 57 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 151.2 ? 58 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 79.4 ? 59 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 96.6 ? 60 O C J HOH . ? A HOH 1360 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 122.8 ? 61 O C J HOH . ? A HOH 1361 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 74.6 ? 62 O C J HOH . ? A HOH 1362 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 80.9 ? 63 O C J HOH . ? A HOH 1363 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 135.9 ? 64 O C J HOH . ? A HOH 1363 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 1_555 109.4 ? 65 O C G EOH . ? A EOH 1114 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 105.0 ? 66 O C J HOH . ? A HOH 1359 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 24.3 ? 67 O C J HOH . ? A HOH 1360 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 153.9 ? 68 O C J HOH . ? A HOH 1360 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 69.2 ? 69 O C J HOH . ? A HOH 1361 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 125.3 ? 70 O C J HOH . ? A HOH 1362 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 52.9 ? 71 O C J HOH . ? A HOH 1363 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 92.0 ? 72 O C J HOH . ? A HOH 1363 ? 2_655 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 121.7 ? 73 O C J HOH . ? A HOH 1364 ? 1_555 CA C B CA . ? A CA 111 ? 1_555 O C J HOH . ? A HOH 1364 ? 2_655 76.3 ? 74 O C J HOH . ? A HOH 1365 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1366 ? 1_555 129.5 ? 75 O C J HOH . ? A HOH 1365 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1367 ? 1_555 149.9 ? 76 O C J HOH . ? A HOH 1366 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1367 ? 1_555 78.9 ? 77 O C J HOH . ? A HOH 1365 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1368 ? 1_555 72.7 ? 78 O C J HOH . ? A HOH 1366 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1368 ? 1_555 74.0 ? 79 O C J HOH . ? A HOH 1367 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1368 ? 1_555 132.5 ? 80 O C J HOH . ? A HOH 1365 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1369 ? 1_555 85.1 ? 81 O C J HOH . ? A HOH 1366 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1369 ? 1_555 83.3 ? 82 O C J HOH . ? A HOH 1367 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1369 ? 1_555 89.6 ? 83 O C J HOH . ? A HOH 1368 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1369 ? 1_555 124.1 ? 84 O C J HOH . ? A HOH 1365 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1370 ? 1_555 71.6 ? 85 O C J HOH . ? A HOH 1366 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1370 ? 1_555 152.7 ? 86 O C J HOH . ? A HOH 1367 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1370 ? 1_555 78.4 ? 87 O C J HOH . ? A HOH 1368 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1370 ? 1_555 133.2 ? 88 O C J HOH . ? A HOH 1369 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1370 ? 1_555 81.6 ? 89 O C J HOH . ? A HOH 1365 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1371 ? 1_555 103.0 ? 90 O C J HOH . ? A HOH 1366 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1371 ? 1_555 101.6 ? 91 O C J HOH . ? A HOH 1367 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1371 ? 1_555 76.1 ? 92 O C J HOH . ? A HOH 1368 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1371 ? 1_555 72.3 ? 93 O C J HOH . ? A HOH 1369 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1371 ? 1_555 163.5 ? 94 O C J HOH . ? A HOH 1370 ? 1_555 CA C C CA . ? A CA 112 ? 1_555 O C J HOH . ? A HOH 1371 ? 1_555 87.4 ? 95 O D J HOH . ? A HOH 1365 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1366 ? 1_555 100.8 ? 96 O D J HOH . ? A HOH 1365 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1367 ? 1_555 75.9 ? 97 O D J HOH . ? A HOH 1366 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1367 ? 1_555 77.7 ? 98 O D J HOH . ? A HOH 1365 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1368 ? 1_555 74.6 ? 99 O D J HOH . ? A HOH 1366 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1368 ? 1_555 155.4 ? 100 O D J HOH . ? A HOH 1367 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1368 ? 1_555 77.8 ? 101 O D J HOH . ? A HOH 1365 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1369 ? 1_555 154.6 ? 102 O D J HOH . ? A HOH 1366 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1369 ? 1_555 84.6 ? 103 O D J HOH . ? A HOH 1367 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1369 ? 1_555 81.2 ? 104 O D J HOH . ? A HOH 1368 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1369 ? 1_555 90.2 ? 105 O D J HOH . ? A HOH 1365 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1370 ? 1_555 115.0 ? 106 O D J HOH . ? A HOH 1366 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1370 ? 1_555 129.2 ? 107 O D J HOH . ? A HOH 1367 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1370 ? 1_555 143.4 ? 108 O D J HOH . ? A HOH 1368 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1370 ? 1_555 72.6 ? 109 O D J HOH . ? A HOH 1369 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1370 ? 1_555 78.1 ? 110 O D J HOH . ? A HOH 1365 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1371 ? 1_555 80.6 ? 111 O D J HOH . ? A HOH 1366 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1371 ? 1_555 80.7 ? 112 O D J HOH . ? A HOH 1367 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1371 ? 1_555 144.2 ? 113 O D J HOH . ? A HOH 1368 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1371 ? 1_555 121.3 ? 114 O D J HOH . ? A HOH 1369 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1371 ? 1_555 124.8 ? 115 O D J HOH . ? A HOH 1370 ? 1_555 CA D C CA . ? A CA 112 ? 1_555 O D J HOH . ? A HOH 1371 ? 1_555 71.5 ? 116 O B J HOH . ? A HOH 1383 ? 1_555 CA B F CA . ? A CA 114 ? 1_555 O B J HOH . ? A HOH 1384 ? 1_555 138.3 ? 117 O B J HOH . ? A HOH 1383 ? 1_555 CA B F CA . ? A CA 114 ? 1_555 O B J HOH . ? A HOH 1385 ? 1_555 88.0 ? 118 O B J HOH . ? A HOH 1384 ? 1_555 CA B F CA . ? A CA 114 ? 1_555 O B J HOH . ? A HOH 1385 ? 1_555 97.5 ? 119 O D J HOH . ? A HOH 1377 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1378 ? 1_555 80.8 ? 120 O D J HOH . ? A HOH 1377 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1379 ? 1_555 96.9 ? 121 O D J HOH . ? A HOH 1378 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1379 ? 1_555 82.5 ? 122 O D J HOH . ? A HOH 1377 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1380 ? 1_555 82.3 ? 123 O D J HOH . ? A HOH 1378 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1380 ? 1_555 154.6 ? 124 O D J HOH . ? A HOH 1379 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1380 ? 1_555 80.8 ? 125 O D J HOH . ? A HOH 1377 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1381 ? 1_555 148.2 ? 126 O D J HOH . ? A HOH 1378 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1381 ? 1_555 100.2 ? 127 O D J HOH . ? A HOH 1379 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1381 ? 1_555 52.4 ? 128 O D J HOH . ? A HOH 1380 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1381 ? 1_555 84.4 ? 129 O D J HOH . ? A HOH 1377 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1382 ? 1_555 67.0 ? 130 O D J HOH . ? A HOH 1378 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1382 ? 1_555 140.7 ? 131 O D J HOH . ? A HOH 1379 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1382 ? 1_555 122.1 ? 132 O D J HOH . ? A HOH 1380 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1382 ? 1_555 43.4 ? 133 O D J HOH . ? A HOH 1381 ? 1_555 CA D E CA . ? A CA 1113 ? 1_555 O D J HOH . ? A HOH 1382 ? 1_555 119.0 ? 134 O E J HOH . ? A HOH 1377 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1378 ? 1_555 120.5 ? 135 O E J HOH . ? A HOH 1377 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1379 ? 1_555 69.6 ? 136 O E J HOH . ? A HOH 1378 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1379 ? 1_555 145.0 ? 137 O E J HOH . ? A HOH 1377 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1380 ? 1_555 74.2 ? 138 O E J HOH . ? A HOH 1378 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1380 ? 1_555 73.3 ? 139 O E J HOH . ? A HOH 1379 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1380 ? 1_555 137.9 ? 140 O E J HOH . ? A HOH 1377 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1381 ? 1_555 79.1 ? 141 O E J HOH . ? A HOH 1378 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1381 ? 1_555 148.0 ? 142 O E J HOH . ? A HOH 1379 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1381 ? 1_555 62.6 ? 143 O E J HOH . ? A HOH 1380 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1381 ? 1_555 90.4 ? 144 O E J HOH . ? A HOH 1377 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1382 ? 1_555 158.5 ? 145 O E J HOH . ? A HOH 1378 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1382 ? 1_555 73.4 ? 146 O E J HOH . ? A HOH 1379 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1382 ? 1_555 109.4 ? 147 O E J HOH . ? A HOH 1380 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1382 ? 1_555 96.6 ? 148 O E J HOH . ? A HOH 1381 ? 1_555 CA E E CA . ? A CA 1113 ? 1_555 O E J HOH . ? A HOH 1382 ? 1_555 81.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 111 ? 13 'BINDING SITE FOR RESIDUE CA A 111' AC2 Software A CA 112 ? 8 'BINDING SITE FOR RESIDUE CA A 112' AC3 Software A CA 113 ? 11 'BINDING SITE FOR RESIDUE CA A 113' AC4 Software A CA 1113 ? 14 'BINDING SITE FOR RESIDUE CA A 1113' AC5 Software A CA 114 ? 4 'BINDING SITE FOR RESIDUE CA A 114' AC6 Software A EOH 1114 ? 12 'BINDING SITE FOR RESIDUE EOH A 1114' AC7 Software A EOH 227 ? 7 'BINDING SITE FOR RESIDUE EOH A 227' AC8 Software A EOH 244 ? 6 'BINDING SITE FOR RESIDUE EOH A 244' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 EOH G . ? EOH A 1114 . ? 1_555 ? 2 AC1 13 HOH J . ? HOH A 1301 . ? 1_555 ? 3 AC1 13 HOH J . ? HOH A 1301 . ? 2_655 ? 4 AC1 13 HOH J . ? HOH A 1356 . ? 1_555 ? 5 AC1 13 HOH J . ? HOH A 1359 . ? 1_555 ? 6 AC1 13 HOH J . ? HOH A 1359 . ? 2_655 ? 7 AC1 13 HOH J . ? HOH A 1360 . ? 1_555 ? 8 AC1 13 HOH J . ? HOH A 1361 . ? 1_555 ? 9 AC1 13 HOH J . ? HOH A 1362 . ? 1_555 ? 10 AC1 13 HOH J . ? HOH A 1363 . ? 2_655 ? 11 AC1 13 HOH J . ? HOH A 1363 . ? 1_555 ? 12 AC1 13 HOH J . ? HOH A 1364 . ? 2_655 ? 13 AC1 13 HOH J . ? HOH A 1364 . ? 1_555 ? 14 AC2 8 HOH J . ? HOH A 222 . ? 1_555 ? 15 AC2 8 HOH J . ? HOH A 1365 . ? 1_555 ? 16 AC2 8 HOH J . ? HOH A 1366 . ? 1_555 ? 17 AC2 8 HOH J . ? HOH A 1367 . ? 1_555 ? 18 AC2 8 HOH J . ? HOH A 1368 . ? 1_555 ? 19 AC2 8 HOH J . ? HOH A 1369 . ? 1_555 ? 20 AC2 8 HOH J . ? HOH A 1370 . ? 1_555 ? 21 AC2 8 HOH J . ? HOH A 1371 . ? 1_555 ? 22 AC3 11 DG A 9 ? DG A 9 . ? 2_656 ? 23 AC3 11 DG A 10 ? DG A 10 . ? 2_656 ? 24 AC3 11 HOH J . ? HOH A 259 . ? 1_555 ? 25 AC3 11 CA E . ? CA A 1113 . ? 1_555 ? 26 AC3 11 HOH J . ? HOH A 1372 . ? 1_555 ? 27 AC3 11 HOH J . ? HOH A 1373 . ? 1_555 ? 28 AC3 11 HOH J . ? HOH A 1374 . ? 1_555 ? 29 AC3 11 HOH J . ? HOH A 1375 . ? 1_555 ? 30 AC3 11 HOH J . ? HOH A 1376 . ? 1_555 ? 31 AC3 11 HOH J . ? HOH A 1379 . ? 1_555 ? 32 AC3 11 HOH J . ? HOH A 1381 . ? 1_555 ? 33 AC4 14 CA D . ? CA A 113 . ? 1_555 ? 34 AC4 14 HOH J . ? HOH A 215 . ? 1_555 ? 35 AC4 14 HOH J . ? HOH A 252 . ? 1_555 ? 36 AC4 14 HOH J . ? HOH A 259 . ? 1_555 ? 37 AC4 14 HOH J . ? HOH A 1372 . ? 1_555 ? 38 AC4 14 HOH J . ? HOH A 1374 . ? 1_555 ? 39 AC4 14 HOH J . ? HOH A 1375 . ? 1_555 ? 40 AC4 14 HOH J . ? HOH A 1376 . ? 1_555 ? 41 AC4 14 HOH J . ? HOH A 1377 . ? 1_555 ? 42 AC4 14 HOH J . ? HOH A 1378 . ? 1_555 ? 43 AC4 14 HOH J . ? HOH A 1379 . ? 1_555 ? 44 AC4 14 HOH J . ? HOH A 1380 . ? 1_555 ? 45 AC4 14 HOH J . ? HOH A 1381 . ? 1_555 ? 46 AC4 14 HOH J . ? HOH A 1382 . ? 1_555 ? 47 AC5 4 HOH J . ? HOH A 260 . ? 1_555 ? 48 AC5 4 HOH J . ? HOH A 1383 . ? 1_555 ? 49 AC5 4 HOH J . ? HOH A 1384 . ? 1_555 ? 50 AC5 4 HOH J . ? HOH A 1385 . ? 1_555 ? 51 AC6 12 DC A 1 ? DC A 1 . ? 2_655 ? 52 AC6 12 DC A 2 ? DC A 2 . ? 2_655 ? 53 AC6 12 DG A 10 ? DG A 10 . ? 2_656 ? 54 AC6 12 CA B . ? CA A 111 . ? 1_555 ? 55 AC6 12 HOH J . ? HOH A 202 . ? 1_555 ? 56 AC6 12 HOH J . ? HOH A 228 . ? 1_555 ? 57 AC6 12 HOH J . ? HOH A 229 . ? 1_555 ? 58 AC6 12 HOH J . ? HOH A 1301 . ? 2_655 ? 59 AC6 12 HOH J . ? HOH A 1356 . ? 1_555 ? 60 AC6 12 HOH J . ? HOH A 1360 . ? 1_555 ? 61 AC6 12 HOH J . ? HOH A 1362 . ? 1_555 ? 62 AC6 12 HOH J . ? HOH A 1363 . ? 1_555 ? 63 AC7 7 DC A 5 ? DC A 5 . ? 3_545 ? 64 AC7 7 DT A 8 ? DT A 8 . ? 2_656 ? 65 AC7 7 HOH J . ? HOH A 204 . ? 1_555 ? 66 AC7 7 HOH J . ? HOH A 207 . ? 1_555 ? 67 AC7 7 HOH J . ? HOH A 241 . ? 1_555 ? 68 AC7 7 EOH I . ? EOH A 244 . ? 1_555 ? 69 AC7 7 HOH J . ? HOH A 1358 . ? 1_555 ? 70 AC8 6 DG A 6 ? DG A 6 . ? 2_656 ? 71 AC8 6 DC A 7 ? DC A 7 . ? 2_656 ? 72 AC8 6 EOH H . ? EOH A 227 . ? 1_555 ? 73 AC8 6 HOH J . ? HOH A 241 . ? 1_555 ? 74 AC8 6 HOH J . ? HOH A 250 . ? 3_545 ? 75 AC8 6 HOH J . ? HOH A 1342 . ? 4_646 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 A _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 A _pdbx_validate_rmsd_bond.bond_value 1.530 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.077 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" A DC 1 ? ? "C3'" A DC 1 ? A "O3'" A DC 1 ? A 93.31 109.70 -16.39 2.50 N 2 1 C8 A DA 3 ? ? N9 A DA 3 ? ? C4 A DA 3 ? ? 108.27 105.80 2.47 0.40 N 3 1 "C1'" A DG 4 ? ? "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? 103.90 110.10 -6.20 1.00 N 4 1 "C3'" A DC 5 ? A "O3'" A DC 5 ? A P A DG 6 ? A 137.52 119.70 17.82 1.20 Y 5 1 "C5'" A DG 6 ? A "C4'" A DG 6 ? A "O4'" A DG 6 ? ? 121.47 109.80 11.67 1.10 N 6 1 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 131.77 128.60 3.17 0.50 N 7 1 C4 A DG 6 ? ? C5 A DG 6 ? ? C6 A DG 6 ? ? 115.00 118.80 -3.80 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.069 'SIDE CHAIN' 2 1 DG A 6 ? A 0.085 'SIDE CHAIN' 3 1 DC A 7 ? A 0.078 'SIDE CHAIN' 4 1 DG A 9 ? ? 0.070 'SIDE CHAIN' # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 218 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id J _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 EOH C1 C N N 145 EOH C2 C N N 146 EOH O O N N 147 EOH H11 H N N 148 EOH H12 H N N 149 EOH H21 H N N 150 EOH H22 H N N 151 EOH H23 H N N 152 EOH HO H N N 153 HOH O O N N 154 HOH H1 H N N 155 HOH H2 H N N 156 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 EOH C1 C2 sing N N 150 EOH C1 O sing N N 151 EOH C1 H11 sing N N 152 EOH C1 H12 sing N N 153 EOH C2 H21 sing N N 154 EOH C2 H22 sing N N 155 EOH C2 H23 sing N N 156 EOH O HO sing N N 157 HOH O H1 sing N N 158 HOH O H2 sing N N 159 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1ENE 'double helix' 1ENE 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 10 2_656 0.105 -0.141 0.056 -6.207 -14.176 -0.157 1 A_DC1:DG10_A A 1 ? A 10 ? 19 1 1 A DC 2 1_555 A DG 9 2_656 0.312 -0.162 0.085 -0.504 -11.690 -0.933 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1 1 A DA 3 1_555 A DT 8 2_656 0.034 -0.125 0.076 -1.186 -4.100 0.541 3 A_DA3:DT8_A A 3 ? A 8 ? 20 1 1 A DG 4 1_555 A DC 7 2_656 -0.141 -0.074 0.249 10.655 -6.195 0.764 4 A_DG4:DC7_A A 4 ? A 7 ? 19 1 1 A DC 5 1_555 A DG 6 2_656 0.247 -0.123 -0.084 14.547 -14.635 -0.019 5 A_DC5:DG6_A A 5 ? A 6 ? 19 1 1 A DG 6 1_555 A DC 5 2_656 -0.247 -0.123 -0.084 -14.547 -14.635 -0.019 6 A_DG6:DC5_A A 6 ? A 5 ? 19 1 1 A DC 7 1_555 A DG 4 2_656 0.141 -0.074 0.249 -10.655 -6.195 0.764 7 A_DC7:DG4_A A 7 ? A 4 ? 19 1 1 A DT 8 1_555 A DA 3 2_656 -0.034 -0.125 0.076 1.186 -4.100 0.541 8 A_DT8:DA3_A A 8 ? A 3 ? 20 1 1 A DG 9 1_555 A DC 2 2_656 -0.312 -0.162 0.085 0.504 -11.690 -0.933 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1 1 A DG 10 1_555 A DC 1 2_656 -0.105 -0.141 0.056 6.206 -14.176 -0.157 10 A_DG10:DC1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 10 2_656 A DC 2 1_555 A DG 9 2_656 -0.545 0.732 3.268 3.398 8.478 28.778 -0.360 1.754 3.263 16.539 -6.630 30.164 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DC 2 1_555 A DG 9 2_656 A DA 3 1_555 A DT 8 2_656 0.137 2.854 3.253 -1.177 -7.359 50.583 3.787 -0.236 2.835 -8.559 1.369 51.094 2 AA_DC2DA3:DT8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DA 3 1_555 A DT 8 2_656 A DG 4 1_555 A DC 7 2_656 0.715 0.800 3.083 -3.012 9.182 20.435 -1.247 -2.905 3.021 24.210 7.941 22.583 3 AA_DA3DG4:DC7DT8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DG 4 1_555 A DC 7 2_656 A DC 5 1_555 A DG 6 2_656 -0.501 0.598 3.249 2.333 -3.564 38.572 1.326 1.034 3.149 -5.375 -3.519 38.798 4 AA_DG4DC5:DG6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DC 5 1_555 A DG 6 2_656 A DG 6 1_555 A DC 5 2_656 0.000 -0.305 3.769 0.000 10.227 44.020 -1.445 0.000 3.615 13.430 0.000 45.135 5 AA_DC5DG6:DC5DG6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DG 6 1_555 A DC 5 2_656 A DC 7 1_555 A DG 4 2_656 0.501 0.598 3.249 -2.333 -3.564 38.572 1.326 -1.034 3.149 -5.375 3.519 38.798 6 AA_DG6DC7:DG4DC5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DC 7 1_555 A DG 4 2_656 A DT 8 1_555 A DA 3 2_656 -0.715 0.800 3.083 3.012 9.182 20.435 -1.247 2.905 3.021 24.210 -7.941 22.583 7 AA_DC7DT8:DA3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DT 8 1_555 A DA 3 2_656 A DG 9 1_555 A DC 2 2_656 -0.137 2.854 3.253 1.177 -7.359 50.583 3.787 0.236 2.835 -8.559 -1.369 51.094 8 AA_DT8DG9:DC2DA3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DG 9 1_555 A DC 2 2_656 A DG 10 1_555 A DC 1 2_656 0.545 0.732 3.268 -3.398 8.478 28.778 -0.360 -1.754 3.263 16.539 6.630 30.164 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _pdbx_initial_refinement_model.accession_code 5DNB _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details BDJ019 # _atom_sites.entry_id 1ENE _atom_sites.fract_transf_matrix[1][1] 0.031496 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.015965 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.038873 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032889 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA H N O P # loop_