data_1ENN # _entry.id 1ENN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ENN pdb_00001enn 10.2210/pdb1enn/pdb NDB BD0037 ? ? RCSB RCSB010748 ? ? WWPDB D_1000010748 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-05-03 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 25 4 'Structure model' '_pdbx_struct_conn_angle.value' 26 4 'Structure model' '_struct_conn.conn_type_id' 27 4 'Structure model' '_struct_conn.id' 28 4 'Structure model' '_struct_conn.pdbx_dist_value' 29 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 30 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 31 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 45 4 'Structure model' '_struct_conn.ptnr2_symmetry' 46 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 47 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 48 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.pdb_id 1ENN _pdbx_database_PDB_obs_spr.replace_pdb_id 475D _pdbx_database_PDB_obs_spr.date 2001-07-20 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ENN _pdbx_database_status.recvd_initial_deposition_date 2000-03-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name NDB _pdbx_database_related.db_id BD0016 _pdbx_database_related.details 'PRELIMINARY REFINEMENT OF THIS STRUCTURE' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Soler-Lopez, M.' 1 'Malinina, L.' 2 'Subirana, J.A.' 3 # _citation.id primary _citation.title 'Solvent organization in an oligonucleotide crystal. The structure of d(GCGAATTCG)2 at atomic resolution.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 275 _citation.page_first 23034 _citation.page_last 23044 _citation.year 2000 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10749874 _citation.pdbx_database_id_DOI 10.1074/jbc.M002119200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Soler-Lopez, M.' 1 ? primary 'Malinina, L.' 2 ? primary 'Subirana, J.A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*G)-3') ; 2755.823 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 7 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'OXYGEN ATOM' 15.999 3 ? ? ? ? 5 water nat water 18.015 151 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GCGAATTCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'CHLORIDE ION' CL 4 'OXYGEN ATOM' O 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DA n 1 6 DT n 1 7 DT n 1 8 DC n 1 9 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 O non-polymer . 'OXYGEN ATOM' ? O 15.999 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DT 6 6 6 DT T A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DG 9 9 9 DG G A . n B 1 1 DG 1 10 10 DG G B . n B 1 2 DC 2 11 11 DC C B . n B 1 3 DG 3 12 12 DG G B . n B 1 4 DA 4 13 13 DA A B . n B 1 5 DA 5 14 14 DA A B . n B 1 6 DT 6 15 15 DT T B . n B 1 7 DT 7 16 16 DT T B . n B 1 8 DC 8 17 17 DC C B . n B 1 9 DG 9 18 18 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 19 19 MG MG A . D 2 MG 1 26 26 MG MG A . E 2 MG 1 31 31 MG MG A . F 2 MG 1 38 38 MG MG A . G 2 MG 1 50 50 MG MG A . H 3 CL 1 51 51 CL CL A . I 4 O 1 180 180 O O A . J 2 MG 1 44 44 MG MG B . K 2 MG 1 49 49 MG MG B . L 4 O 1 179 179 O O B . M 4 O 1 181 181 O O B . N 5 HOH 1 20 20 HOH HOH A . N 5 HOH 2 22 22 HOH HOH A . N 5 HOH 3 24 24 HOH HOH A . N 5 HOH 4 25 25 HOH HOH A . N 5 HOH 5 27 27 HOH HOH A . N 5 HOH 6 28 28 HOH HOH A . N 5 HOH 7 29 29 HOH HOH A . N 5 HOH 8 30 30 HOH HOH A . N 5 HOH 9 34 34 HOH HOH A . N 5 HOH 10 39 39 HOH HOH A . N 5 HOH 11 40 40 HOH HOH A . N 5 HOH 12 41 41 HOH HOH A . N 5 HOH 13 42 42 HOH HOH A . N 5 HOH 14 43 43 HOH HOH A . N 5 HOH 15 45 45 HOH HOH A . N 5 HOH 16 48 48 HOH HOH A . N 5 HOH 17 52 52 HOH HOH A . N 5 HOH 18 55 55 HOH HOH A . N 5 HOH 19 58 58 HOH HOH A . N 5 HOH 20 60 60 HOH HOH A . N 5 HOH 21 61 61 HOH HOH A . N 5 HOH 22 62 62 HOH HOH A . N 5 HOH 23 63 63 HOH HOH A . N 5 HOH 24 64 64 HOH HOH A . N 5 HOH 25 65 65 HOH HOH A . N 5 HOH 26 66 66 HOH HOH A . N 5 HOH 27 67 67 HOH HOH A . N 5 HOH 28 68 68 HOH HOH A . N 5 HOH 29 69 69 HOH HOH A . N 5 HOH 30 70 70 HOH HOH A . N 5 HOH 31 72 72 HOH HOH A . N 5 HOH 32 73 73 HOH HOH A . N 5 HOH 33 74 74 HOH HOH A . N 5 HOH 34 75 75 HOH HOH A . N 5 HOH 35 76 76 HOH HOH A . N 5 HOH 36 77 77 HOH HOH A . N 5 HOH 37 78 78 HOH HOH A . N 5 HOH 38 79 79 HOH HOH A . N 5 HOH 39 81 81 HOH HOH A . N 5 HOH 40 82 82 HOH HOH A . N 5 HOH 41 83 83 HOH HOH A . N 5 HOH 42 84 84 HOH HOH A . N 5 HOH 43 85 85 HOH HOH A . N 5 HOH 44 86 86 HOH HOH A . N 5 HOH 45 87 87 HOH HOH A . N 5 HOH 46 88 88 HOH HOH A . N 5 HOH 47 90 90 HOH HOH A . N 5 HOH 48 112 112 HOH HOH A . N 5 HOH 49 114 114 HOH HOH A . N 5 HOH 50 115 115 HOH HOH A . N 5 HOH 51 116 116 HOH HOH A . N 5 HOH 52 118 118 HOH HOH A . N 5 HOH 53 119 119 HOH HOH A . N 5 HOH 54 120 120 HOH HOH A . N 5 HOH 55 121 121 HOH HOH A . N 5 HOH 56 122 122 HOH HOH A . N 5 HOH 57 123 123 HOH HOH A . N 5 HOH 58 126 126 HOH HOH A . N 5 HOH 59 127 127 HOH HOH A . N 5 HOH 60 130 130 HOH HOH A . N 5 HOH 61 133 133 HOH HOH A . N 5 HOH 62 134 134 HOH HOH A . N 5 HOH 63 139 139 HOH HOH A . N 5 HOH 64 140 140 HOH HOH A . N 5 HOH 65 141 141 HOH HOH A . N 5 HOH 66 142 142 HOH HOH A . N 5 HOH 67 143 143 HOH HOH A . N 5 HOH 68 146 146 HOH HOH A . N 5 HOH 69 148 148 HOH HOH A . N 5 HOH 70 149 149 HOH HOH A . N 5 HOH 71 152 152 HOH HOH A . N 5 HOH 72 156 156 HOH HOH A . N 5 HOH 73 158 158 HOH HOH A . N 5 HOH 74 162 162 HOH HOH A . N 5 HOH 75 163 163 HOH HOH A . N 5 HOH 76 165 165 HOH HOH A . N 5 HOH 77 166 166 HOH HOH A . N 5 HOH 78 169 169 HOH HOH A . N 5 HOH 79 170 170 HOH HOH A . N 5 HOH 80 172 172 HOH HOH A . N 5 HOH 81 173 173 HOH HOH A . N 5 HOH 82 174 174 HOH HOH A . N 5 HOH 83 176 176 HOH HOH A . N 5 HOH 84 177 177 HOH HOH A . N 5 HOH 85 178 178 HOH HOH A . O 5 HOH 1 21 21 HOH HOH B . O 5 HOH 2 23 23 HOH HOH B . O 5 HOH 3 32 32 HOH HOH B . O 5 HOH 4 33 33 HOH HOH B . O 5 HOH 5 35 35 HOH HOH B . O 5 HOH 6 36 36 HOH HOH B . O 5 HOH 7 37 37 HOH HOH B . O 5 HOH 8 46 46 HOH HOH B . O 5 HOH 9 47 47 HOH HOH B . O 5 HOH 10 53 53 HOH HOH B . O 5 HOH 11 54 54 HOH HOH B . O 5 HOH 12 56 56 HOH HOH B . O 5 HOH 13 57 57 HOH HOH B . O 5 HOH 14 59 59 HOH HOH B . O 5 HOH 15 71 71 HOH HOH B . O 5 HOH 16 80 80 HOH HOH B . O 5 HOH 17 89 89 HOH HOH B . O 5 HOH 18 91 91 HOH HOH B . O 5 HOH 19 92 92 HOH HOH B . O 5 HOH 20 93 93 HOH HOH B . O 5 HOH 21 94 94 HOH HOH B . O 5 HOH 22 95 95 HOH HOH B . O 5 HOH 23 96 96 HOH HOH B . O 5 HOH 24 97 97 HOH HOH B . O 5 HOH 25 98 98 HOH HOH B . O 5 HOH 26 99 99 HOH HOH B . O 5 HOH 27 100 100 HOH HOH B . O 5 HOH 28 101 101 HOH HOH B . O 5 HOH 29 102 102 HOH HOH B . O 5 HOH 30 103 103 HOH HOH B . O 5 HOH 31 104 104 HOH HOH B . O 5 HOH 32 105 105 HOH HOH B . O 5 HOH 33 106 106 HOH HOH B . O 5 HOH 34 107 107 HOH HOH B . O 5 HOH 35 108 108 HOH HOH B . O 5 HOH 36 109 109 HOH HOH B . O 5 HOH 37 110 110 HOH HOH B . O 5 HOH 38 111 111 HOH HOH B . O 5 HOH 39 113 113 HOH HOH B . O 5 HOH 40 117 117 HOH HOH B . O 5 HOH 41 124 124 HOH HOH B . O 5 HOH 42 125 125 HOH HOH B . O 5 HOH 43 128 128 HOH HOH B . O 5 HOH 44 129 129 HOH HOH B . O 5 HOH 45 131 131 HOH HOH B . O 5 HOH 46 132 132 HOH HOH B . O 5 HOH 47 135 135 HOH HOH B . O 5 HOH 48 136 136 HOH HOH B . O 5 HOH 49 137 137 HOH HOH B . O 5 HOH 50 138 138 HOH HOH B . O 5 HOH 51 145 145 HOH HOH B . O 5 HOH 52 147 147 HOH HOH B . O 5 HOH 53 150 150 HOH HOH B . O 5 HOH 54 151 151 HOH HOH B . O 5 HOH 55 153 153 HOH HOH B . O 5 HOH 56 154 154 HOH HOH B . O 5 HOH 57 155 155 HOH HOH B . O 5 HOH 58 157 157 HOH HOH B . O 5 HOH 59 159 159 HOH HOH B . O 5 HOH 60 160 160 HOH HOH B . O 5 HOH 61 161 161 HOH HOH B . O 5 HOH 62 164 164 HOH HOH B . O 5 HOH 63 167 167 HOH HOH B . O 5 HOH 64 168 168 HOH HOH B . O 5 HOH 65 171 171 HOH HOH B . O 5 HOH 66 175 175 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' . ? 3 SHELXL-97 refinement . ? 4 X-PLOR phasing . ? 5 # _cell.entry_id 1ENN _cell.length_a 21.938 _cell.length_b 36.540 _cell.length_c 52.728 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ENN _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 1ENN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 33.24 _exptl_crystal.density_Matthews 1.84 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.1 _exptl_crystal_grow.pdbx_details 'ACRIDINE-(ARG)4 ADDUCT, CACODYLATE, MGCL2, MPD, pH 7.1, vapor diffusion at 293K, VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'ACRIDINE-(ARG)4 ADDUCT' ? ? ? 1 2 1 CACODYLATE ? ? ? 1 3 1 MGCL2 ? ? ? 1 4 1 MPD ? ? ? 1 5 2 MGCL2 ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9076 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 _diffrn_source.pdbx_wavelength 0.9076 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1ENN _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 0.89 _reflns.number_obs 32684 _reflns.number_all 320317 _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 0.89 _reflns_shell.d_res_low 0.90 _reflns_shell.percent_possible_all 59 _reflns_shell.Rmerge_I_obs 0.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.43 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ENN _refine.ls_number_reflns_obs 29278 _refine.ls_number_reflns_all 32479 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 0.89 _refine.ls_percent_reflns_obs 97.6 _refine.ls_R_factor_obs 0.135 _refine.ls_R_factor_all 0.14 _refine.ls_R_factor_R_work 0.135 _refine.ls_R_factor_R_free 0.161 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 3201 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;'OXYGEN ATOMS' 179, 180, 181 REPRESENT ADDITIONAL PEAKS OF ELECTRON DENSITY FOUND AT DISTANCES 0.9-1.4 A FROM EITHER ATOM OF THE PHOSPHATE GROUPS 9, 12, 14. MOST LIKELY, THESE THREE 'OXYGENS' ARE A SIGN OF DISORDER OF THESE PHOSPHATES AND WERE REFINED AS OXYGEN ATOMS. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 391 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 169 _refine_hist.number_atoms_total 568 _refine_hist.d_res_high 0.89 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 2.6 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist ? ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes ? ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol ? ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt ? ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1ENN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1ENN _struct.title 'SOLVENT ORGANIZATION IN AN OLIGONUCLEOTIDE CRYSTAL: THE STRUCTURE OF D(GCGAATTCG)2 AT ATOMIC RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ENN _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, ATOMIC RESOLUTION, IONS, HYDRATION, BASE TRIPLET, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 2 ? K N N 2 ? L N N 4 ? M N N 4 ? N N N 5 ? O N N 5 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1ENN _struct_ref.pdbx_db_accession 1ENN _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ENN A 1 ? 9 ? 1ENN 1 ? 9 ? 1 9 2 1 1ENN B 1 ? 9 ? 1ENN 10 ? 18 ? 10 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DG 9 OP1 ? ? ? 1_555 I O . O ? ? A DG 9 A O 180 1_555 ? ? ? ? ? ? ? 1.385 ? ? covale2 covale both ? A DG 9 P ? ? ? 1_555 I O . O ? ? A DG 9 A O 180 1_555 ? ? ? ? ? ? ? 1.495 ? ? covale3 covale both ? B DG 3 P ? ? ? 1_555 M O . O ? ? B DG 12 B O 181 1_555 ? ? ? ? ? ? ? 1.374 ? ? covale4 covale one ? B DG 3 OP2 ? ? ? 1_555 M O . O ? ? B DG 12 B O 181 1_555 ? ? ? ? ? ? ? 0.959 ? ? covale5 covale one ? B DA 5 OP1 ? ? ? 1_555 L O . O ? ? B DA 14 B O 179 1_555 ? ? ? ? ? ? ? 1.102 ? ? covale6 covale both ? B DA 5 P ? ? ? 1_555 L O . O ? ? B DA 14 B O 179 1_555 ? ? ? ? ? ? ? 1.685 ? ? metalc1 metalc ? ? A DG 1 N7 ? ? ? 1_555 D MG . MG ? ? A DG 1 A MG 26 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc2 metalc ? ? A DA 4 OP2 ? ? ? 1_555 F MG . MG ? ? A DA 4 A MG 38 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 19 A HOH 20 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 19 A HOH 22 1_555 ? ? ? ? ? ? ? 2.078 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 19 A HOH 24 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 19 A HOH 25 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 19 B HOH 21 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 19 B HOH 23 1_555 ? ? ? ? ? ? ? 2.057 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 26 A HOH 27 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 26 A HOH 28 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 26 A HOH 29 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 26 A HOH 30 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc13 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 26 A HOH 143 1_455 ? ? ? ? ? ? ? 2.278 ? ? metalc14 metalc ? ? D MG . MG ? ? ? 1_555 B DG 3 OP1 ? ? A MG 26 B DG 12 4_455 ? ? ? ? ? ? ? 1.997 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 31 A HOH 34 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 31 B HOH 32 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 31 B HOH 33 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 31 B HOH 35 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc19 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O A ? A MG 31 B HOH 36 1_555 ? ? ? ? ? ? ? 2.141 ? ? metalc20 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O B ? A MG 31 B HOH 36 1_555 ? ? ? ? ? ? ? 1.933 ? ? metalc21 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O A ? A MG 31 B HOH 37 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc22 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O B ? A MG 31 B HOH 37 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc23 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 38 A HOH 39 1_555 ? ? ? ? ? ? ? 1.983 ? ? metalc24 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 38 A HOH 40 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc25 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 38 A HOH 41 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc26 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 38 A HOH 42 1_555 ? ? ? ? ? ? ? 2.025 ? ? metalc27 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O A ? A MG 38 A HOH 43 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc28 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O B ? A MG 38 A HOH 43 1_555 ? ? ? ? ? ? ? 1.955 ? ? metalc29 metalc ? ? N HOH . O ? ? ? 1_555 J MG . MG ? ? A HOH 45 B MG 44 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc30 metalc ? ? N HOH . O ? ? ? 1_555 J MG . MG ? ? A HOH 48 B MG 44 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc31 metalc ? ? G MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 50 A HOH 90 1_555 ? ? ? ? ? ? ? 2.056 ? ? metalc32 metalc ? ? G MG . MG ? ? ? 1_555 N HOH . O A ? A MG 50 A HOH 158 1_555 ? ? ? ? ? ? ? 2.014 ? ? metalc33 metalc ? ? G MG . MG ? ? ? 1_555 N HOH . O B ? A MG 50 A HOH 158 1_555 ? ? ? ? ? ? ? 1.873 ? ? metalc34 metalc ? ? G MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 50 A HOH 177 1_555 ? ? ? ? ? ? ? 1.791 ? ? metalc35 metalc ? ? G MG . MG ? ? ? 1_555 O HOH . O C ? A MG 50 B HOH 160 1_555 ? ? ? ? ? ? ? 1.808 ? ? metalc36 metalc ? ? G MG . MG ? ? ? 1_555 O HOH . O B ? A MG 50 B HOH 160 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc37 metalc ? ? N HOH . O ? ? ? 1_555 K MG . MG ? ? A HOH 52 B MG 49 1_555 ? ? ? ? ? ? ? 1.882 ? ? metalc38 metalc ? ? N HOH . O ? ? ? 1_555 K MG . MG ? ? A HOH 58 B MG 49 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc39 metalc ? ? N HOH . O ? ? ? 1_555 J MG . MG ? ? A HOH 176 B MG 44 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc40 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 44 B HOH 46 1_555 ? ? ? ? ? ? ? 1.949 ? ? metalc41 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 44 B HOH 47 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc42 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 44 B HOH 171 2_664 ? ? ? ? ? ? ? 2.015 ? ? metalc43 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 49 B HOH 53 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc44 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 49 B HOH 54 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc45 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 49 B HOH 56 1_555 ? ? ? ? ? ? ? 1.942 ? ? metalc46 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 49 B HOH 57 1_555 ? ? ? ? ? ? ? 2.721 ? ? hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 4 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 4 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 5 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 5 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 6 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 6 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 7 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 7 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 1 ? A DG 1 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 27 ? 1_555 172.4 ? 2 N7 ? A DG 1 ? A DG 1 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 28 ? 1_555 90.0 ? 3 O ? N HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 28 ? 1_555 93.7 ? 4 N7 ? A DG 1 ? A DG 1 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 87.9 ? 5 O ? N HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 88.3 ? 6 O ? N HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 29 ? 1_555 177.7 ? 7 N7 ? A DG 1 ? A DG 1 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 30 ? 1_555 84.2 ? 8 O ? N HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 30 ? 1_555 89.2 ? 9 O ? N HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 30 ? 1_555 88.7 ? 10 O ? N HOH . ? A HOH 29 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 30 ? 1_555 90.1 ? 11 N7 ? A DG 1 ? A DG 1 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 143 ? 1_455 132.2 ? 12 O ? N HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 143 ? 1_455 42.1 ? 13 O ? N HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 143 ? 1_455 81.8 ? 14 O ? N HOH . ? A HOH 29 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 143 ? 1_455 98.9 ? 15 O ? N HOH . ? A HOH 30 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 O ? N HOH . ? A HOH 143 ? 1_455 48.9 ? 16 N7 ? A DG 1 ? A DG 1 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 OP1 ? B DG 3 ? B DG 12 ? 4_455 95.0 ? 17 O ? N HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 OP1 ? B DG 3 ? B DG 12 ? 4_455 91.4 ? 18 O ? N HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 OP1 ? B DG 3 ? B DG 12 ? 4_455 93.9 ? 19 O ? N HOH . ? A HOH 29 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 OP1 ? B DG 3 ? B DG 12 ? 4_455 87.3 ? 20 O ? N HOH . ? A HOH 30 ? 1_555 MG ? D MG . ? A MG 26 ? 1_555 OP1 ? B DG 3 ? B DG 12 ? 4_455 177.3 ? 21 O ? N HOH . ? A HOH 143 ? 1_455 MG ? D MG . ? A MG 26 ? 1_555 OP1 ? B DG 3 ? B DG 12 ? 4_455 132.2 ? 22 OP2 ? A DA 4 ? A DA 4 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 39 ? 1_555 90.3 ? 23 OP2 ? A DA 4 ? A DA 4 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 40 ? 1_555 96.5 ? 24 O ? N HOH . ? A HOH 39 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 40 ? 1_555 172.0 ? 25 OP2 ? A DA 4 ? A DA 4 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 41 ? 1_555 177.3 ? 26 O ? N HOH . ? A HOH 39 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 41 ? 1_555 91.5 ? 27 O ? N HOH . ? A HOH 40 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 41 ? 1_555 81.6 ? 28 OP2 ? A DA 4 ? A DA 4 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 42 ? 1_555 94.3 ? 29 O ? N HOH . ? A HOH 39 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 42 ? 1_555 83.3 ? 30 O ? N HOH . ? A HOH 40 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 42 ? 1_555 100.4 ? 31 O ? N HOH . ? A HOH 41 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O ? N HOH . ? A HOH 42 ? 1_555 87.8 ? 32 OP2 ? A DA 4 ? A DA 4 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O A N HOH . ? A HOH 43 ? 1_555 91.8 ? 33 O ? N HOH . ? A HOH 39 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O A N HOH . ? A HOH 43 ? 1_555 88.1 ? 34 O ? N HOH . ? A HOH 40 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O A N HOH . ? A HOH 43 ? 1_555 87.5 ? 35 O ? N HOH . ? A HOH 41 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O A N HOH . ? A HOH 43 ? 1_555 86.3 ? 36 O ? N HOH . ? A HOH 42 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O A N HOH . ? A HOH 43 ? 1_555 169.4 ? 37 OP2 ? A DA 4 ? A DA 4 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O B N HOH . ? A HOH 43 ? 1_555 93.5 ? 38 O ? N HOH . ? A HOH 39 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O B N HOH . ? A HOH 43 ? 1_555 69.7 ? 39 O ? N HOH . ? A HOH 40 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O B N HOH . ? A HOH 43 ? 1_555 105.6 ? 40 O ? N HOH . ? A HOH 41 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O B N HOH . ? A HOH 43 ? 1_555 85.3 ? 41 O ? N HOH . ? A HOH 42 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O B N HOH . ? A HOH 43 ? 1_555 151.8 ? 42 O A N HOH . ? A HOH 43 ? 1_555 MG ? F MG . ? A MG 38 ? 1_555 O B N HOH . ? A HOH 43 ? 1_555 18.5 ? 43 O ? N HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? N HOH . ? A HOH 22 ? 1_555 86.2 ? 44 O ? N HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? N HOH . ? A HOH 24 ? 1_555 92.1 ? 45 O ? N HOH . ? A HOH 22 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? N HOH . ? A HOH 24 ? 1_555 89.5 ? 46 O ? N HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? N HOH . ? A HOH 25 ? 1_555 92.1 ? 47 O ? N HOH . ? A HOH 22 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? N HOH . ? A HOH 25 ? 1_555 177.1 ? 48 O ? N HOH . ? A HOH 24 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? N HOH . ? A HOH 25 ? 1_555 88.3 ? 49 O ? N HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 21 ? 1_555 86.3 ? 50 O ? N HOH . ? A HOH 22 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 21 ? 1_555 94.6 ? 51 O ? N HOH . ? A HOH 24 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 21 ? 1_555 175.5 ? 52 O ? N HOH . ? A HOH 25 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 21 ? 1_555 87.6 ? 53 O ? N HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 174.9 ? 54 O ? N HOH . ? A HOH 22 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 89.8 ? 55 O ? N HOH . ? A HOH 24 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 91.0 ? 56 O ? N HOH . ? A HOH 25 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 92.1 ? 57 O ? O HOH . ? B HOH 21 ? 1_555 MG ? C MG . ? A MG 19 ? 1_555 O ? O HOH . ? B HOH 23 ? 1_555 90.9 ? 58 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O ? O HOH . ? B HOH 32 ? 1_555 88.6 ? 59 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O ? O HOH . ? B HOH 33 ? 1_555 83.6 ? 60 O ? O HOH . ? B HOH 32 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O ? O HOH . ? B HOH 33 ? 1_555 90.4 ? 61 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O ? O HOH . ? B HOH 35 ? 1_555 175.3 ? 62 O ? O HOH . ? B HOH 32 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O ? O HOH . ? B HOH 35 ? 1_555 86.7 ? 63 O ? O HOH . ? B HOH 33 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O ? O HOH . ? B HOH 35 ? 1_555 95.8 ? 64 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 36 ? 1_555 95.0 ? 65 O ? O HOH . ? B HOH 32 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 36 ? 1_555 169.5 ? 66 O ? O HOH . ? B HOH 33 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 36 ? 1_555 80.3 ? 67 O ? O HOH . ? B HOH 35 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 36 ? 1_555 89.5 ? 68 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 36 ? 1_555 90.5 ? 69 O ? O HOH . ? B HOH 32 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 36 ? 1_555 156.4 ? 70 O ? O HOH . ? B HOH 33 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 36 ? 1_555 113.0 ? 71 O ? O HOH . ? B HOH 35 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 36 ? 1_555 94.0 ? 72 O A O HOH . ? B HOH 36 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 36 ? 1_555 33.7 ? 73 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 37 ? 1_555 90.7 ? 74 O ? O HOH . ? B HOH 32 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 37 ? 1_555 95.5 ? 75 O ? O HOH . ? B HOH 33 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 37 ? 1_555 171.7 ? 76 O ? O HOH . ? B HOH 35 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 37 ? 1_555 90.3 ? 77 O A O HOH . ? B HOH 36 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 37 ? 1_555 94.3 ? 78 O B O HOH . ? B HOH 36 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O A O HOH . ? B HOH 37 ? 1_555 60.8 ? 79 O ? N HOH . ? A HOH 34 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 82.1 ? 80 O ? O HOH . ? B HOH 32 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 64.7 ? 81 O ? O HOH . ? B HOH 33 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 151.5 ? 82 O ? O HOH . ? B HOH 35 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 96.4 ? 83 O A O HOH . ? B HOH 36 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 125.5 ? 84 O B O HOH . ? B HOH 36 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 91.8 ? 85 O A O HOH . ? B HOH 37 ? 1_555 MG ? E MG . ? A MG 31 ? 1_555 O B O HOH . ? B HOH 37 ? 1_555 31.9 ? 86 O ? N HOH . ? A HOH 45 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? N HOH . ? A HOH 48 ? 1_555 85.4 ? 87 O ? N HOH . ? A HOH 45 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? N HOH . ? A HOH 176 ? 1_555 87.5 ? 88 O ? N HOH . ? A HOH 48 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? N HOH . ? A HOH 176 ? 1_555 81.2 ? 89 O ? N HOH . ? A HOH 45 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 46 ? 1_555 90.6 ? 90 O ? N HOH . ? A HOH 48 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 46 ? 1_555 97.8 ? 91 O ? N HOH . ? A HOH 176 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 46 ? 1_555 177.9 ? 92 O ? N HOH . ? A HOH 45 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 47 ? 1_555 157.3 ? 93 O ? N HOH . ? A HOH 48 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 47 ? 1_555 72.3 ? 94 O ? N HOH . ? A HOH 176 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 47 ? 1_555 93.5 ? 95 O ? O HOH . ? B HOH 46 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 47 ? 1_555 88.0 ? 96 O ? N HOH . ? A HOH 45 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 171 ? 2_664 92.5 ? 97 O ? N HOH . ? A HOH 48 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 171 ? 2_664 177.6 ? 98 O ? N HOH . ? A HOH 176 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 171 ? 2_664 97.5 ? 99 O ? O HOH . ? B HOH 46 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 171 ? 2_664 83.4 ? 100 O ? O HOH . ? B HOH 47 ? 1_555 MG ? J MG . ? B MG 44 ? 1_555 O ? O HOH . ? B HOH 171 ? 2_664 109.9 ? 101 O ? N HOH . ? A HOH 90 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O A N HOH . ? A HOH 158 ? 1_555 82.5 ? 102 O ? N HOH . ? A HOH 90 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B N HOH . ? A HOH 158 ? 1_555 84.2 ? 103 O A N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B N HOH . ? A HOH 158 ? 1_555 37.2 ? 104 O ? N HOH . ? A HOH 90 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O ? N HOH . ? A HOH 177 ? 1_555 81.2 ? 105 O A N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O ? N HOH . ? A HOH 177 ? 1_555 86.1 ? 106 O B N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O ? N HOH . ? A HOH 177 ? 1_555 49.4 ? 107 O ? N HOH . ? A HOH 90 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O C O HOH . ? B HOH 160 ? 1_555 169.2 ? 108 O A N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O C O HOH . ? B HOH 160 ? 1_555 104.4 ? 109 O B N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O C O HOH . ? B HOH 160 ? 1_555 96.3 ? 110 O ? N HOH . ? A HOH 177 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O C O HOH . ? B HOH 160 ? 1_555 90.9 ? 111 O ? N HOH . ? A HOH 90 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B O HOH . ? B HOH 160 ? 1_555 141.3 ? 112 O A N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B O HOH . ? B HOH 160 ? 1_555 100.7 ? 113 O B N HOH . ? A HOH 158 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B O HOH . ? B HOH 160 ? 1_555 121.4 ? 114 O ? N HOH . ? A HOH 177 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B O HOH . ? B HOH 160 ? 1_555 137.3 ? 115 O C O HOH . ? B HOH 160 ? 1_555 MG ? G MG . ? A MG 50 ? 1_555 O B O HOH . ? B HOH 160 ? 1_555 46.5 ? 116 O ? N HOH . ? A HOH 52 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? N HOH . ? A HOH 58 ? 1_555 87.7 ? 117 O ? N HOH . ? A HOH 52 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 53 ? 1_555 94.5 ? 118 O ? N HOH . ? A HOH 58 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 53 ? 1_555 169.4 ? 119 O ? N HOH . ? A HOH 52 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 54 ? 1_555 83.4 ? 120 O ? N HOH . ? A HOH 58 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 54 ? 1_555 87.9 ? 121 O ? O HOH . ? B HOH 53 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 54 ? 1_555 82.0 ? 122 O ? N HOH . ? A HOH 52 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 56 ? 1_555 117.8 ? 123 O ? N HOH . ? A HOH 58 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 56 ? 1_555 96.7 ? 124 O ? O HOH . ? B HOH 53 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 56 ? 1_555 91.5 ? 125 O ? O HOH . ? B HOH 54 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 56 ? 1_555 158.4 ? 126 O ? N HOH . ? A HOH 52 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 57 ? 1_555 69.6 ? 127 O ? N HOH . ? A HOH 58 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 57 ? 1_555 127.2 ? 128 O ? O HOH . ? B HOH 53 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 57 ? 1_555 63.1 ? 129 O ? O HOH . ? B HOH 54 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 57 ? 1_555 132.7 ? 130 O ? O HOH . ? B HOH 56 ? 1_555 MG ? K MG . ? B MG 49 ? 1_555 O ? O HOH . ? B HOH 57 ? 1_555 58.8 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 19 ? 6 'BINDING SITE FOR RESIDUE MG A 19' AC2 Software A MG 26 ? 7 'BINDING SITE FOR RESIDUE MG A 26' AC3 Software A MG 31 ? 6 'BINDING SITE FOR RESIDUE MG A 31' AC4 Software A MG 38 ? 6 'BINDING SITE FOR RESIDUE MG A 38' AC5 Software B MG 44 ? 8 'BINDING SITE FOR RESIDUE MG B 44' AC6 Software B MG 49 ? 6 'BINDING SITE FOR RESIDUE MG B 49' AC7 Software A MG 50 ? 4 'BINDING SITE FOR RESIDUE MG A 50' AC8 Software A CL 51 ? 5 'BINDING SITE FOR RESIDUE CL A 51' AC9 Software B O 179 ? 4 'BINDING SITE FOR RESIDUE O B 179' BC1 Software A O 180 ? 3 'BINDING SITE FOR RESIDUE O A 180' BC2 Software B O 181 ? 3 'BINDING SITE FOR RESIDUE O B 181' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH N . ? HOH A 20 . ? 1_555 ? 2 AC1 6 HOH N . ? HOH A 22 . ? 1_555 ? 3 AC1 6 HOH N . ? HOH A 24 . ? 1_555 ? 4 AC1 6 HOH N . ? HOH A 25 . ? 1_555 ? 5 AC1 6 HOH O . ? HOH B 21 . ? 1_555 ? 6 AC1 6 HOH O . ? HOH B 23 . ? 1_555 ? 7 AC2 7 DG A 1 ? DG A 1 . ? 1_555 ? 8 AC2 7 HOH N . ? HOH A 27 . ? 1_555 ? 9 AC2 7 HOH N . ? HOH A 28 . ? 1_555 ? 10 AC2 7 HOH N . ? HOH A 29 . ? 1_555 ? 11 AC2 7 HOH N . ? HOH A 30 . ? 1_555 ? 12 AC2 7 HOH N . ? HOH A 143 . ? 1_455 ? 13 AC2 7 DG B 3 ? DG B 12 . ? 4_455 ? 14 AC3 6 HOH N . ? HOH A 34 . ? 1_555 ? 15 AC3 6 HOH O . ? HOH B 32 . ? 1_555 ? 16 AC3 6 HOH O . ? HOH B 33 . ? 1_555 ? 17 AC3 6 HOH O . ? HOH B 35 . ? 1_555 ? 18 AC3 6 HOH O . ? HOH B 36 . ? 1_555 ? 19 AC3 6 HOH O . ? HOH B 37 . ? 1_555 ? 20 AC4 6 DA A 4 ? DA A 4 . ? 1_555 ? 21 AC4 6 HOH N . ? HOH A 39 . ? 1_555 ? 22 AC4 6 HOH N . ? HOH A 40 . ? 1_555 ? 23 AC4 6 HOH N . ? HOH A 41 . ? 1_555 ? 24 AC4 6 HOH N . ? HOH A 42 . ? 1_555 ? 25 AC4 6 HOH N . ? HOH A 43 . ? 1_555 ? 26 AC5 8 HOH N . ? HOH A 45 . ? 1_555 ? 27 AC5 8 HOH N . ? HOH A 48 . ? 1_555 ? 28 AC5 8 HOH N . ? HOH A 176 . ? 1_555 ? 29 AC5 8 DC B 2 ? DC B 11 . ? 2_664 ? 30 AC5 8 HOH O . ? HOH B 46 . ? 1_555 ? 31 AC5 8 HOH O . ? HOH B 47 . ? 1_555 ? 32 AC5 8 HOH O . ? HOH B 168 . ? 2_664 ? 33 AC5 8 HOH O . ? HOH B 171 . ? 2_664 ? 34 AC6 6 HOH N . ? HOH A 52 . ? 1_555 ? 35 AC6 6 HOH N . ? HOH A 58 . ? 1_555 ? 36 AC6 6 HOH O . ? HOH B 53 . ? 1_555 ? 37 AC6 6 HOH O . ? HOH B 54 . ? 1_555 ? 38 AC6 6 HOH O . ? HOH B 56 . ? 1_555 ? 39 AC6 6 HOH O . ? HOH B 57 . ? 1_555 ? 40 AC7 4 HOH N . ? HOH A 90 . ? 1_555 ? 41 AC7 4 HOH N . ? HOH A 158 . ? 1_555 ? 42 AC7 4 HOH N . ? HOH A 177 . ? 1_555 ? 43 AC7 4 HOH O . ? HOH B 160 . ? 1_555 ? 44 AC8 5 DG A 1 ? DG A 1 . ? 1_555 ? 45 AC8 5 DC A 2 ? DC A 2 . ? 1_555 ? 46 AC8 5 HOH N . ? HOH A 20 . ? 1_555 ? 47 AC8 5 HOH N . ? HOH A 114 . ? 1_555 ? 48 AC8 5 DG B 1 ? DG B 10 . ? 2_564 ? 49 AC9 4 DG A 3 ? DG A 3 . ? 4_455 ? 50 AC9 4 DA B 4 ? DA B 13 . ? 1_555 ? 51 AC9 4 DA B 5 ? DA B 14 . ? 1_555 ? 52 AC9 4 HOH O . ? HOH B 59 . ? 1_555 ? 53 BC1 3 DC A 8 ? DC A 8 . ? 1_555 ? 54 BC1 3 DG A 9 ? DG A 9 . ? 1_555 ? 55 BC1 3 HOH N . ? HOH A 87 . ? 1_555 ? 56 BC2 3 HOH N . ? HOH A 121 . ? 4_555 ? 57 BC2 3 DC B 2 ? DC B 11 . ? 1_555 ? 58 BC2 3 DG B 3 ? DG B 12 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "O3'" B DA 13 ? ? O B O 179 ? ? 1.81 2 1 "O5'" A DG 9 ? ? O A O 180 ? ? 1.87 3 1 "O3'" A DC 8 ? ? O A O 180 ? ? 1.87 4 1 O B O 179 ? ? O B HOH 59 ? ? 1.87 5 1 O A HOH 148 ? ? O A HOH 149 ? ? 1.94 6 1 "C5'" A DG 9 ? ? O A O 180 ? ? 1.97 7 1 "O5'" B DG 12 ? ? O B O 181 ? ? 1.97 8 1 "O3'" B DC 11 ? ? O B O 181 ? ? 2.11 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 27 ? ? 1_555 O A HOH 143 ? ? 1_455 1.58 2 1 O A HOH 30 ? ? 1_555 O A HOH 143 ? ? 1_455 1.80 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DG 1 ? ? "C4'" A DG 1 ? ? 1.571 1.512 0.059 0.007 N 2 1 "O3'" A DG 1 ? ? P A DC 2 ? A 1.527 1.607 -0.080 0.012 Y 3 1 P A DC 2 ? A "O5'" A DC 2 ? ? 1.660 1.593 0.067 0.010 N 4 1 P B DC 11 ? B "O5'" B DC 11 ? B 1.700 1.593 0.107 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A DG 1 ? B "C5'" A DG 1 ? ? "C4'" A DG 1 ? ? 103.40 109.40 -6.00 0.80 N 2 1 "C3'" A DG 1 ? ? "O3'" A DG 1 ? ? P A DC 2 ? B 129.97 119.70 10.27 1.20 Y 3 1 "O5'" A DC 2 ? ? P A DC 2 ? A OP1 A DC 2 ? A 99.94 105.70 -5.76 0.90 N 4 1 "O5'" A DC 2 ? ? P A DC 2 ? B OP1 A DC 2 ? B 123.56 110.70 12.86 1.20 N 5 1 P A DC 2 ? A "O5'" A DC 2 ? ? "C5'" A DC 2 ? ? 138.24 120.90 17.34 1.60 N 6 1 P A DC 2 ? B "O5'" A DC 2 ? ? "C5'" A DC 2 ? ? 109.00 120.90 -11.90 1.60 N 7 1 "C3'" A DT 6 ? B "O3'" A DT 6 ? B P A DT 7 ? B 142.43 119.70 22.73 1.20 Y 8 1 P A DT 7 ? B "O5'" A DT 7 ? B "C5'" A DT 7 ? B 111.00 120.90 -9.90 1.60 N 9 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 110.56 108.30 2.26 0.30 N 10 1 "C3'" B DG 10 ? ? "O3'" B DG 10 ? ? P B DC 11 ? A 127.32 119.70 7.62 1.20 Y 11 1 "O3'" B DG 10 ? ? P B DC 11 ? B "O5'" B DC 11 ? B 91.00 104.00 -13.00 1.90 Y 12 1 "O3'" B DG 10 ? ? P B DC 11 ? B OP2 B DC 11 ? B 117.79 110.50 7.29 1.10 Y 13 1 "O5'" B DC 11 ? A "C5'" B DC 11 ? A "C4'" B DC 11 ? ? 102.43 109.40 -6.97 0.80 N 14 1 P B DC 11 ? B "O5'" B DC 11 ? B "C5'" B DC 11 ? B 137.39 120.90 16.49 1.60 N 15 1 "O4'" B DC 11 ? A "C1'" B DC 11 ? ? "C2'" B DC 11 ? ? 98.36 105.90 -7.54 0.80 N 16 1 "O4'" B DC 11 ? A "C1'" B DC 11 ? ? N1 B DC 11 ? ? 100.32 108.00 -7.68 0.70 N 17 1 P B DG 18 ? B "O5'" B DG 18 ? ? "C5'" B DG 18 ? ? 134.25 120.90 13.35 1.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 2 ? A 0.074 'SIDE CHAIN' 2 1 DT A 7 ? A 0.063 'SIDE CHAIN' 3 1 DT B 16 ? ? 0.066 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CL CL CL N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 MG MG MG N N 148 O O O N N 149 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 1ENN _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 9 1_555 0.182 -0.118 0.059 0.280 -10.943 -1.180 1 A_DC2:DG18_B A 2 ? B 18 ? 19 1 1 A DG 3 1_555 B DC 8 1_555 -0.339 -0.169 -0.040 3.955 -0.072 -2.002 2 A_DG3:DC17_B A 3 ? B 17 ? 19 1 1 A DA 4 1_555 B DT 7 1_555 0.021 -0.118 0.042 10.986 -13.798 0.243 3 A_DA4:DT16_B A 4 ? B 16 ? 20 1 1 A DA 5 1_555 B DT 6 1_555 0.018 -0.102 0.072 3.353 -15.805 2.816 4 A_DA5:DT15_B A 5 ? B 15 ? 20 1 1 A DT 6 1_555 B DA 5 1_555 -0.036 -0.098 0.108 -1.892 -15.774 5.211 5 A_DT6:DA14_B A 6 ? B 14 ? 20 1 1 A DT 7 1_555 B DA 4 1_555 -0.121 -0.143 -0.099 -8.026 -17.922 1.258 6 A_DT7:DA13_B A 7 ? B 13 ? 20 1 1 A DC 8 1_555 B DG 3 1_555 0.267 -0.138 -0.179 -2.536 -4.310 0.957 7 A_DC8:DG12_B A 8 ? B 12 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 -0.260 -0.118 0.153 2.958 -4.551 -0.253 8 A_DG9:DC11_B A 9 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 0.842 0.980 3.223 2.427 5.561 29.293 0.719 -1.117 3.404 10.849 -4.736 29.902 1 AA_DC2DG3:DC17DG18_BB A 2 ? B 18 ? A 3 ? B 17 ? 1 A DG 3 1_555 B DC 8 1_555 A DA 4 1_555 B DT 7 1_555 -0.819 1.358 3.242 -0.931 4.216 37.837 1.538 1.135 3.387 6.476 1.430 38.073 2 AA_DG3DA4:DT16DC17_BB A 3 ? B 17 ? A 4 ? B 16 ? 1 A DA 4 1_555 B DT 7 1_555 A DA 5 1_555 B DT 6 1_555 0.374 -0.406 3.362 -0.977 1.905 38.755 -0.848 -0.684 3.329 2.869 1.471 38.812 3 AA_DA4DA5:DT15DT16_BB A 4 ? B 16 ? A 5 ? B 15 ? 1 A DA 5 1_555 B DT 6 1_555 A DT 6 1_555 B DA 5 1_555 0.167 -0.631 3.315 0.326 0.112 30.916 -1.206 -0.249 3.315 0.210 -0.612 30.918 4 AA_DA5DT6:DA14DT15_BB A 5 ? B 15 ? A 6 ? B 14 ? 1 A DT 6 1_555 B DA 5 1_555 A DT 7 1_555 B DA 4 1_555 -0.450 -0.205 3.297 2.973 2.561 37.884 -0.640 1.068 3.234 3.931 -4.565 38.079 5 AA_DT6DT7:DA13DA14_BB A 6 ? B 14 ? A 7 ? B 13 ? 1 A DT 7 1_555 B DA 4 1_555 A DC 8 1_555 B DG 3 1_555 1.057 1.308 3.250 0.843 -0.842 39.565 2.030 -1.463 3.243 -1.243 -1.245 39.583 6 AA_DT7DC8:DG12DA13_BB A 7 ? B 13 ? A 8 ? B 12 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 -1.565 0.910 3.233 -5.047 5.665 30.298 0.557 1.898 3.549 10.630 9.471 31.212 7 AA_DC8DG9:DC11DG12_BB A 8 ? B 12 ? A 9 ? B 11 ? # _atom_sites.entry_id 1ENN _atom_sites.fract_transf_matrix[1][1] 0.045583 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027367 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018965 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL MG N O P # loop_