data_1EU2 # _entry.id 1EU2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1EU2 pdb_00001eu2 10.2210/pdb1eu2/pdb RCSB RCSB010889 ? ? WWPDB D_1000010889 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1EU6 'dimeric structure of cyclic d(CATTCATT)' unspecified BMRB 4694 '1H assigments of the dimeric form of cyclic d(CATTCATT)' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1EU2 _pdbx_database_status.recvd_initial_deposition_date 2000-04-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Escaja, N.' 1 'Pedroso, E.' 2 'Rico, M.' 3 'Gonzalez, C.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Dimeric Solution Structure of Two Cyclic Octamers: Four-Stranded DNA Structures Stabilized by A:T:A:T and G:C:G:C' J.Am.Chem.Soc. 122 12732 12742 2000 JACSAT US 0002-7863 0004 ? -1 10.1021/ja002778q 1 'NMR Structure of Two Cyclic Oligonucleotides. A Monomer Dimer Equilibrium between DumbellL and Quadruplex Structures' J.Am.Chem.Soc. 120 2176 2177 1998 JACSAT US 0002-7863 0004 ? ? 10.1021/ja973691g # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Escaja, N.' 1 ? primary 'Pedroso, E.' 2 ? primary 'Rico, M.' 3 ? primary 'Gonzalez, C.' 4 ? 1 'Gonzalez, C.' 5 ? 1 'Escaja, N.' 6 ? 1 'Rico, M.' 7 ? 1 'Pedroso, E.' 8 ? # _cell.entry_id 1EU2 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EU2 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'CYCLIC OLIGONUCLEOTIDE D(TGCTCGCT)' _entity.formula_weight 2393.578 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DG)(DC)(DT)(DC)(DG)(DC)(DT)' _entity_poly.pdbx_seq_one_letter_code_can TGCTCGCT _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DC n 1 4 DT n 1 5 DC n 1 6 DG n 1 7 DC n 1 8 DT n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1EU2 _struct_ref.pdbx_db_accession 1EU2 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1EU2 A 1 ? 8 ? 1EU2 1 ? 8 ? 1 8 2 1 1EU2 B 1 ? 8 ? 1EU2 1 ? 8 ? 1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 DQF-COSY 3 1 1 ROESY 4 1 1 TOCSY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.01 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2.4 mM oligonucleotide concentration, 25mM phosphate buffer;' _pdbx_nmr_sample_details.solvent_system 'either 100% D2O or 90% H2O, 10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AMX _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1EU2 _pdbx_nmr_refine.method 'relaxation matrix, restrained molecular dynamics' _pdbx_nmr_refine.details 'see references' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1EU2 _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 1.3 collection Bruker 1 XEASY 1.0 'data analysis' 'Bartels et al.' 2 DYANA 1.5 'structure solution' 'P. Guntert et al.' 3 MARDIGRAS 4.0 'structure solution' 'T.L. James' 4 DYANA 1.5 refinement 'P. Guntert et al.' 5 Amber 4.1 refinement 'D. Pearlman' 6 # _exptl.entry_id 1EU2 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1EU2 _struct.title 'DIMERIC SOLUTION STRUCTURE OF THE CYCLIC OCTAMER CD(TGCTCGCT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1EU2 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'QUADRUPLEX, FOUR-STRANDED DNA, UNUSUAL DNA, BI-LOOP, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DT 1 P ? ? ? 1_555 A DT 8 "O3'" ? ? A DT 1 A DT 8 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale2 covale both ? B DT 1 P ? ? ? 1_555 B DT 8 "O3'" ? ? B DT 1 B DT 8 1_555 ? ? ? ? ? ? ? 1.587 ? ? hydrog1 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 2 A DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 2 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 2 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 2 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 3 A DG 6 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 3 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 3 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 3 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 7 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 7 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 7 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DC 7 O2 ? ? B DG 2 B DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog16 hydrog ? ? B DC 3 O2 ? ? ? 1_555 B DG 6 N2 ? ? B DC 3 B DG 6 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1EU2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1EU2 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DT 8 8 8 DT T A . n B 1 1 DT 1 1 1 DT T B . n B 1 2 DG 2 2 2 DG G B . n B 1 3 DC 3 3 3 DC C B . n B 1 4 DT 4 4 4 DT T B . n B 1 5 DC 5 5 5 DC C B . n B 1 6 DG 6 6 6 DG G B . n B 1 7 DC 7 7 7 DC C B . n B 1 8 DT 8 8 8 DT T B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-01-24 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 8 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 10 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.30 108.30 3.00 0.30 N 2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.57 122.90 -4.33 0.60 N 3 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.39 108.30 2.09 0.30 N 4 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.13 108.30 1.83 0.30 N 5 1 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 110.21 108.30 1.91 0.30 N 6 1 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.68 122.90 -4.22 0.60 N 7 1 "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? "C3'" B DG 2 ? ? 109.74 106.00 3.74 0.60 N 8 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 112.35 108.30 4.05 0.30 N 9 1 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.30 122.90 -3.60 0.60 N 10 1 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 111.42 108.30 3.12 0.30 N 11 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 110.16 108.30 1.86 0.30 N 12 2 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.72 108.30 2.42 0.30 N 13 2 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.45 122.90 -4.45 0.60 N 14 2 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 109.92 106.00 3.92 0.60 N 15 2 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.31 108.30 3.01 0.30 N 16 2 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 109.80 106.00 3.80 0.60 N 17 2 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.10 108.30 2.80 0.30 N 18 2 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 110.61 108.30 2.31 0.30 N 19 2 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.97 122.90 -3.93 0.60 N 20 2 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.29 122.90 -3.61 0.60 N 21 2 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.75 108.30 2.45 0.30 N 22 3 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.20 122.90 -3.70 0.60 N 23 3 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.08 108.30 2.78 0.30 N 24 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.48 108.30 2.18 0.30 N 25 3 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 110.15 108.30 1.85 0.30 N 26 3 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 119.01 122.90 -3.89 0.60 N 27 3 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.52 108.30 2.22 0.30 N 28 3 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.36 108.30 2.06 0.30 N 29 4 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.20 108.30 1.90 0.30 N 30 4 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.01 122.90 -3.89 0.60 N 31 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.52 108.30 2.22 0.30 N 32 4 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.13 122.90 -3.77 0.60 N 33 4 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.94 108.30 2.64 0.30 N 34 4 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.03 106.00 4.03 0.60 N 35 4 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.21 122.90 -3.69 0.60 N 36 4 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.71 122.90 -4.19 0.60 N 37 4 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.54 108.30 2.24 0.30 N 38 4 "O5'" B DC 5 ? ? P B DC 5 ? ? OP1 B DC 5 ? ? 100.11 105.70 -5.59 0.90 N 39 4 "O5'" B DC 5 ? ? "C5'" B DC 5 ? ? "C4'" B DC 5 ? ? 102.20 109.40 -7.20 0.80 N 40 4 "O4'" B DG 6 ? ? "C4'" B DG 6 ? ? "C3'" B DG 6 ? ? 109.71 106.00 3.71 0.60 N 41 4 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.16 108.30 1.86 0.30 N 42 5 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.53 122.90 -4.37 0.60 N 43 5 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.63 106.00 4.63 0.60 N 44 5 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.02 108.30 2.72 0.30 N 45 5 "O4'" B DT 1 ? ? "C4'" B DT 1 ? ? "C3'" B DT 1 ? ? 110.42 106.00 4.42 0.60 N 46 5 "C5'" B DT 1 ? ? "C4'" B DT 1 ? ? "C3'" B DT 1 ? ? 124.85 115.70 9.15 1.20 N 47 5 "C5'" B DT 1 ? ? "C4'" B DT 1 ? ? "O4'" B DT 1 ? ? 117.40 109.80 7.60 1.10 N 48 5 "C4'" B DT 1 ? ? "C3'" B DT 1 ? ? "C2'" B DT 1 ? ? 95.76 102.20 -6.44 0.70 N 49 5 N3 B DT 1 ? ? C2 B DT 1 ? ? O2 B DT 1 ? ? 118.67 122.30 -3.63 0.60 N 50 5 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.72 122.90 -4.18 0.60 N 51 5 "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? "C3'" B DG 2 ? ? 109.68 106.00 3.68 0.60 N 52 5 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.51 108.30 3.21 0.30 N 53 5 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.13 108.30 1.83 0.30 N 54 5 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 110.71 108.30 2.41 0.30 N 55 6 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.80 122.90 -4.10 0.60 N 56 6 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 109.79 106.00 3.79 0.60 N 57 6 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 109.78 106.00 3.78 0.60 N 58 6 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.13 106.00 4.13 0.60 N 59 6 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.80 108.30 2.50 0.30 N 60 6 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 110.86 108.30 2.56 0.30 N 61 6 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.81 122.90 -4.09 0.60 N 62 6 "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? "C3'" B DG 2 ? ? 109.80 106.00 3.80 0.60 N 63 6 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 110.58 108.30 2.28 0.30 N 64 6 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.11 122.90 -3.79 0.60 N 65 6 "O4'" B DG 6 ? ? "C4'" B DG 6 ? ? "C3'" B DG 6 ? ? 109.80 106.00 3.80 0.60 N 66 7 "C5'" A DT 1 ? ? "C4'" A DT 1 ? ? "C3'" A DT 1 ? ? 123.31 115.70 7.61 1.20 N 67 7 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.97 122.90 -3.93 0.60 N 68 7 "O4'" A DT 4 ? ? "C4'" A DT 4 ? ? "C3'" A DT 4 ? ? 109.98 106.00 3.98 0.60 N 69 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.98 122.90 -3.92 0.60 N 70 7 "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? "C3'" A DC 5 ? ? 100.61 104.50 -3.89 0.40 N 71 7 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.04 106.00 4.04 0.60 N 72 7 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 111.16 108.30 2.86 0.30 N 73 7 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.72 122.90 -4.18 0.60 N 74 7 "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? "C3'" B DG 2 ? ? 109.81 106.00 3.81 0.60 N 75 7 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.43 108.30 3.13 0.30 N 76 7 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.10 108.30 1.80 0.30 N 77 7 "O4'" B DC 5 ? ? "C4'" B DC 5 ? ? "C3'" B DC 5 ? ? 101.86 104.50 -2.64 0.40 N 78 7 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.60 108.30 2.30 0.30 N 79 7 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 110.80 108.30 2.50 0.30 N 80 8 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.92 122.90 -3.98 0.60 N 81 8 "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? "C3'" A DG 2 ? ? 109.88 106.00 3.88 0.60 N 82 8 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.55 108.30 2.25 0.30 N 83 8 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.10 106.00 4.10 0.60 N 84 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.68 108.30 2.38 0.30 N 85 8 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.71 108.30 3.41 0.30 N 86 8 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 110.33 108.30 2.03 0.30 N 87 8 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 118.62 122.90 -4.28 0.60 N 88 8 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.32 108.30 2.02 0.30 N 89 8 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.11 108.30 2.81 0.30 N 90 9 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.66 108.30 2.36 0.30 N 91 9 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.99 122.90 -3.91 0.60 N 92 9 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DC 5 ? ? 126.90 119.70 7.20 1.20 Y 93 9 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.87 108.30 2.57 0.30 N 94 9 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 109.74 106.00 3.74 0.60 N 95 9 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.96 108.30 2.66 0.30 N 96 9 "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? "C3'" B DG 2 ? ? 109.94 106.00 3.94 0.60 N 97 9 "O4'" B DC 5 ? ? "C4'" B DC 5 ? ? "C3'" B DC 5 ? ? 101.91 104.50 -2.59 0.40 N 98 9 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.60 108.30 2.30 0.30 N 99 9 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 111.48 108.30 3.18 0.30 N 100 9 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.57 108.30 3.27 0.30 N 101 10 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.49 108.30 2.19 0.30 N 102 10 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.63 122.90 -4.27 0.60 N 103 10 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 110.89 108.30 2.59 0.30 N 104 10 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.69 108.30 2.39 0.30 N 105 10 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 112.68 108.30 4.38 0.30 N 106 10 C6 B DT 1 ? ? C5 B DT 1 ? ? C7 B DT 1 ? ? 119.12 122.90 -3.78 0.60 N 107 10 "O4'" B DG 2 ? ? "C4'" B DG 2 ? ? "C3'" B DG 2 ? ? 109.78 106.00 3.78 0.60 N 108 10 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.18 108.30 1.88 0.30 N 109 10 C6 B DT 4 ? ? C5 B DT 4 ? ? C7 B DT 4 ? ? 119.29 122.90 -3.61 0.60 N 110 10 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 110.16 108.30 1.86 0.30 N 111 10 "O4'" B DG 6 ? ? "C4'" B DG 6 ? ? "C3'" B DG 6 ? ? 109.69 106.00 3.69 0.60 N 112 10 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 110.23 108.30 1.93 0.30 N 113 10 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.82 108.30 2.52 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 3 DG B 2 ? ? 0.056 'SIDE CHAIN' 2 3 DG B 6 ? ? 0.081 'SIDE CHAIN' 3 4 DG A 6 ? ? 0.066 'SIDE CHAIN' 4 10 DG A 6 ? ? 0.085 'SIDE CHAIN' # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 2 "C4'" ? B DC 5 ? 'WRONG HAND' . 2 2 "C3'" ? B DC 5 ? 'WRONG HAND' . 3 3 "C4'" ? A DT 1 ? 'WRONG HAND' . 4 3 "C3'" ? A DT 1 ? 'WRONG HAND' . 5 4 "C4'" ? B DC 5 ? 'WRONG HAND' . 6 4 "C3'" ? B DC 5 ? 'WRONG HAND' . 7 5 "C4'" ? A DC 5 ? 'WRONG HAND' . 8 5 "C3'" ? A DC 5 ? 'WRONG HAND' . 9 5 "C4'" ? B DT 1 ? 'WRONG HAND' . 10 5 "C1'" ? B DT 1 ? 'WRONG HAND' . 11 6 "C4'" ? A DC 5 ? 'WRONG HAND' . 12 6 "C3'" ? A DC 5 ? 'WRONG HAND' . 13 6 "C4'" ? B DC 5 ? 'WRONG HAND' . 14 6 "C3'" ? B DC 5 ? 'WRONG HAND' . 15 7 "C4'" ? A DT 1 ? 'WRONG HAND' . 16 7 "C3'" ? A DT 1 ? 'WRONG HAND' . 17 7 "C4'" ? A DC 5 ? 'WRONG HAND' . 18 7 "C3'" ? A DC 5 ? 'WRONG HAND' . 19 7 "C1'" ? B DC 5 ? 'WRONG HAND' . 20 8 "C1'" ? B DC 5 ? 'WRONG HAND' . 21 9 "C1'" ? A DC 5 ? 'WRONG HAND' . 22 9 "C1'" ? B DC 5 ? 'WRONG HAND' . 23 10 "C1'" ? B DC 5 ? 'WRONG HAND' . # _ndb_struct_conf_na.entry_id 1EU2 _ndb_struct_conf_na.feature 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 3 1_555 -0.360 -0.215 -0.395 -6.895 -2.294 0.770 1 A_DG2:DC3_B A 2 ? B 3 ? 19 1 1 A DC 3 1_555 B DG 2 1_555 0.336 -0.164 -0.325 12.575 -5.999 1.107 2 A_DC3:DG2_B A 3 ? B 2 ? 19 1 1 A DG 6 1_555 B DC 7 1_555 -0.266 -0.161 -0.209 -8.358 -8.286 0.947 3 A_DG6:DC7_B A 6 ? B 7 ? 19 1 1 A DC 7 1_555 B DG 6 1_555 0.303 -0.171 -0.192 8.926 -8.563 1.258 4 A_DC7:DG6_B A 7 ? B 6 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 3 1_555 A DC 3 1_555 B DG 2 1_555 -0.136 -0.183 2.816 -1.533 -3.707 28.347 0.357 -0.025 2.820 -7.522 3.110 28.624 1 AA_DG2DC3:DG2DC3_BB A 2 ? B 3 ? A 3 ? B 2 ? 1 A DG 6 1_555 B DC 7 1_555 A DC 7 1_555 B DG 6 1_555 0.053 0.099 2.840 -0.368 -4.594 26.979 1.195 -0.192 2.784 -9.756 0.781 27.363 2 AA_DG6DC7:DG6DC7_BB A 6 ? B 7 ? A 7 ? B 6 ? #