HEADER HYDROLASE/DNA 16-MAY-00 1F0O TITLE PVUII ENDONUCLEASE/COGNATE DNA COMPLEX (GLUTARALDEHYDE-CROSSLINKED TITLE 2 CRYSTAL) AT PH 7.5 WITH TWO CALCIUM IONS AT EACH ACTIVE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: (5'-D(*TP*GP*AP*CP*CP*AP*GP*CP*TP*GP*GP*TP*C-3'); COMPND 3 CHAIN: C, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SELF-ANNEALING OLIGONUCLEOTIDE CONTAINING COGNATE SIX COMPND 6 BASE PAIR SEQUENCE; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TYPE II RESTRICTION ENZYME PVUII; COMPND 9 CHAIN: A, B; COMPND 10 SYNONYM: PVUII ENDONUCLEASE, R.PVUII; COMPND 11 EC: 3.1.21.4; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: PROTEUS VULGARIS; SOURCE 5 ORGANISM_TAXID: 585; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPR594 KEYWDS PROTEIN-DNA COMPLEX, ENDONUCLEASE TYPE II, RESTRICTION ENZYME, KEYWDS 2 CATALYTIC METAL VISUALIZATION, HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,X.CHENG REVDAT 4 07-FEB-24 1F0O 1 REMARK LINK REVDAT 3 04-OCT-17 1F0O 1 REMARK REVDAT 2 24-FEB-09 1F0O 1 VERSN REVDAT 1 06-NOV-00 1F0O 0 JRNL AUTH J.R.HORTON,X.CHENG JRNL TITL PVUII ENDONUCLEASE CONTAINS TWO CALCIUM IONS IN ACTIVE JRNL TITL 2 SITES. JRNL REF J.MOL.BIOL. V. 300 1049 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10903853 JRNL DOI 10.1006/JMBI.2000.3938 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.R.HORTON,H.G.NASTRI,P.D.RIGGS,X.CHENG REMARK 1 TITL ASP34 OF PVUII ENDONUCLEASE IS DIRECTLY INVOLVED IN DNA REMARK 1 TITL 2 MINOR GROOVE RECOGNITION AND INDIRECTLY INVOLVED IN REMARK 1 TITL 3 CATALYSIS REMARK 1 REF J.MOL.BIOL. V. 284 1491 1998 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1998.2269 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.R.HORTON,J.BONVENTRE,X.CHENG REMARK 1 TITL HOW IS MODIFICATION OF THE DNA SUBSTRATE RECOGNIZED BY THE REMARK 1 TITL 2 PVUII RESTRICTION ENDONUCLEASE? REMARK 1 REF BIOL.CHEM. V. 379 451 1998 REMARK 1 REFN ISSN 1431-6730 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 12739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1241 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2449 REMARK 3 NUCLEIC ACID ATOMS : 511 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1F0O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-00. REMARK 100 THE DEPOSITION ID IS D_1000011100. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13150 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.33200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE, CACL2, PH REMARK 280 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.02150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.99650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.35100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 22.99650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.02150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.35100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER CONSISTING OF REMARK 300 PROTEIN CHAIN A AND CHAIN B AND DOUBLE STRAINED DNA CONSISTING REMARK 300 OF CHAINS C AND D WITH TWO CA+2 AT EACH MONOMERIC ACTIVE SITE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 53 REMARK 465 ARG A 54 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 HIS B 3 REMARK 465 GLY B 53 REMARK 465 ARG B 54 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC D 14 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DC D 14 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC D 14 C6 REMARK 470 HIS A 3 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 PRO A 52 O REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 GLN A 96 CG CD OE1 NE2 REMARK 470 ARG A 105 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 118 CG CD CE NZ REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 TYR A 132 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 PRO B 52 O REMARK 470 GLU B 55 CG CD OE1 OE2 REMARK 470 ASN B 62 CG OD1 ND2 REMARK 470 LYS B 78 CG CD CE NZ REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 137 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 984 O HOH B 985 2.05 REMARK 500 O HOH A 803 O HOH B 975 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC D 5 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 82 -74.85 -124.93 REMARK 500 TRP A 131 -70.41 -55.09 REMARK 500 ASP A 134 5.87 -59.82 REMARK 500 ASN A 141 70.97 49.90 REMARK 500 ASP B 34 29.57 48.83 REMARK 500 ILE B 74 2.19 -67.85 REMARK 500 THR B 82 -66.71 -120.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG C 8 0.07 SIDE CHAIN REMARK 500 DT D 2 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 725 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 9 OP1 REMARK 620 2 HOH C1028 O 96.5 REMARK 620 3 GLU B 55 O 99.2 82.0 REMARK 620 4 GLY B 56 O 147.1 98.3 54.3 REMARK 620 5 ASP B 58 OD2 81.6 156.5 121.5 95.7 REMARK 620 6 ASP B 58 OD1 82.6 161.6 80.0 74.3 41.8 REMARK 620 7 GLU B 68 OE2 80.3 93.3 175.2 127.8 63.3 104.6 REMARK 620 8 GLU B 68 OE1 124.4 100.6 135.3 81.4 62.9 95.0 46.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 761 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC C 9 OP1 REMARK 620 2 HOH C 898 O 77.1 REMARK 620 3 ASP B 58 OD2 93.2 164.6 REMARK 620 4 GLU B 68 OE2 85.1 108.6 82.1 REMARK 620 5 LEU B 69 O 163.4 92.8 93.7 110.8 REMARK 620 6 HOH B 762 O 91.2 83.5 84.8 166.1 74.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 701 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC D 9 OP1 REMARK 620 2 ASP A 58 OD2 76.6 REMARK 620 3 GLU A 68 OE2 82.3 65.3 REMARK 620 4 LEU A 69 O 148.7 76.6 101.0 REMARK 620 5 HOH A 847 O 85.7 77.9 143.0 72.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 784 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC D 9 OP1 REMARK 620 2 HOH D 981 O 85.3 REMARK 620 3 GLY A 56 O 142.0 125.3 REMARK 620 4 ASP A 58 OD1 71.1 155.9 75.2 REMARK 620 5 GLU A 68 OE1 111.3 99.9 87.1 93.1 REMARK 620 6 GLU A 68 OE2 72.6 82.3 127.7 94.5 41.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 725 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 761 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 784 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EYU RELATED DB: PDB REMARK 900 RELATED ID: 3PYI RELATED DB: PDB REMARK 900 RELATED ID: 2PYI RELATED DB: PDB REMARK 900 RELATED ID: 1PVI RELATED DB: PDB DBREF 1F0O A 1 157 UNP P23657 T2P2_PROVU 1 157 DBREF 1F0O B 1 157 UNP P23657 T2P2_PROVU 1 157 DBREF 1F0O C 2 14 PDB 1F0O 1F0O 2 14 DBREF 1F0O D 2 14 PDB 1F0O 1F0O 2 14 SEQRES 1 C 13 DT DG DA DC DC DA DG DC DT DG DG DT DC SEQRES 1 D 13 DT DG DA DC DC DA DG DC DT DG DG DT DC SEQRES 1 A 157 MET SER HIS PRO ASP LEU ASN LYS LEU LEU GLU LEU TRP SEQRES 2 A 157 PRO HIS ILE GLN GLU TYR GLN ASP LEU ALA LEU LYS HIS SEQRES 3 A 157 GLY ILE ASN ASP ILE PHE GLN ASP ASN GLY GLY LYS LEU SEQRES 4 A 157 LEU GLN VAL LEU LEU ILE THR GLY LEU THR VAL LEU PRO SEQRES 5 A 157 GLY ARG GLU GLY ASN ASP ALA VAL ASP ASN ALA GLY GLN SEQRES 6 A 157 GLU TYR GLU LEU LYS SER ILE ASN ILE ASP LEU THR LYS SEQRES 7 A 157 GLY PHE SER THR HIS HIS HIS MET ASN PRO VAL ILE ILE SEQRES 8 A 157 ALA LYS TYR ARG GLN VAL PRO TRP ILE PHE ALA ILE TYR SEQRES 9 A 157 ARG GLY ILE ALA ILE GLU ALA ILE TYR ARG LEU GLU PRO SEQRES 10 A 157 LYS ASP LEU GLU PHE TYR TYR ASP LYS TRP GLU ARG LYS SEQRES 11 A 157 TRP TYR SER ASP GLY HIS LYS ASP ILE ASN ASN PRO LYS SEQRES 12 A 157 ILE PRO VAL LYS TYR VAL MET GLU HIS GLY THR LYS ILE SEQRES 13 A 157 TYR SEQRES 1 B 157 MET SER HIS PRO ASP LEU ASN LYS LEU LEU GLU LEU TRP SEQRES 2 B 157 PRO HIS ILE GLN GLU TYR GLN ASP LEU ALA LEU LYS HIS SEQRES 3 B 157 GLY ILE ASN ASP ILE PHE GLN ASP ASN GLY GLY LYS LEU SEQRES 4 B 157 LEU GLN VAL LEU LEU ILE THR GLY LEU THR VAL LEU PRO SEQRES 5 B 157 GLY ARG GLU GLY ASN ASP ALA VAL ASP ASN ALA GLY GLN SEQRES 6 B 157 GLU TYR GLU LEU LYS SER ILE ASN ILE ASP LEU THR LYS SEQRES 7 B 157 GLY PHE SER THR HIS HIS HIS MET ASN PRO VAL ILE ILE SEQRES 8 B 157 ALA LYS TYR ARG GLN VAL PRO TRP ILE PHE ALA ILE TYR SEQRES 9 B 157 ARG GLY ILE ALA ILE GLU ALA ILE TYR ARG LEU GLU PRO SEQRES 10 B 157 LYS ASP LEU GLU PHE TYR TYR ASP LYS TRP GLU ARG LYS SEQRES 11 B 157 TRP TYR SER ASP GLY HIS LYS ASP ILE ASN ASN PRO LYS SEQRES 12 B 157 ILE PRO VAL LYS TYR VAL MET GLU HIS GLY THR LYS ILE SEQRES 13 B 157 TYR HET CA A 701 1 HET CA A 784 1 HET CA B 725 1 HET CA B 761 1 HETNAM CA CALCIUM ION FORMUL 5 CA 4(CA 2+) FORMUL 9 HOH *190(H2 O) HELIX 1 1 ASP A 5 LYS A 25 1 21 HELIX 2 2 ASN A 35 GLY A 47 1 13 HELIX 3 3 ASN A 87 GLN A 96 1 10 HELIX 4 4 GLU A 116 ASP A 134 1 19 HELIX 5 5 VAL A 146 GLY A 153 1 8 HELIX 6 6 PRO B 4 HIS B 26 1 23 HELIX 7 7 ASN B 35 GLY B 47 1 13 HELIX 8 8 ASN B 87 ARG B 95 1 9 HELIX 9 9 GLU B 116 ASP B 134 1 19 HELIX 10 10 VAL B 146 GLY B 153 1 8 SHEET 1 A 6 THR A 49 VAL A 50 0 SHEET 2 A 6 ALA A 59 VAL A 60 -1 O VAL A 60 N THR A 49 SHEET 3 A 6 GLU A 66 ASN A 73 -1 N TYR A 67 O ALA A 59 SHEET 4 A 6 TRP A 99 ARG A 105 1 O ILE A 100 N LYS A 70 SHEET 5 A 6 ALA A 108 LEU A 115 -1 O ALA A 108 N ARG A 105 SHEET 6 A 6 THR A 154 LYS A 155 -1 N THR A 154 O ARG A 114 SHEET 1 B 2 GLY A 79 PHE A 80 0 SHEET 2 B 2 ILE A 144 PRO A 145 -1 O ILE A 144 N PHE A 80 SHEET 1 C 5 THR B 49 VAL B 50 0 SHEET 2 C 5 ALA B 59 VAL B 60 -1 O VAL B 60 N THR B 49 SHEET 3 C 5 GLU B 66 ASN B 73 -1 N TYR B 67 O ALA B 59 SHEET 4 C 5 TRP B 99 ARG B 105 1 O ILE B 100 N LYS B 70 SHEET 5 C 5 ALA B 108 LEU B 115 -1 N ALA B 108 O ARG B 105 SHEET 1 D 2 GLY B 79 PHE B 80 0 SHEET 2 D 2 ILE B 144 PRO B 145 -1 O ILE B 144 N PHE B 80 LINK OP1 DC C 9 CA CA B 725 1555 1555 2.32 LINK OP1 DC C 9 CA CA B 761 1555 1555 2.59 LINK O HOH C 898 CA CA B 761 1555 1555 2.79 LINK O HOH C1028 CA CA B 725 1555 1555 2.49 LINK OP1 DC D 9 CA CA A 701 1555 1555 2.56 LINK OP1 DC D 9 CA CA A 784 1555 1555 2.56 LINK O HOH D 981 CA CA A 784 1555 1555 2.66 LINK O GLY A 56 CA CA A 784 1555 1555 2.64 LINK OD2 ASP A 58 CA CA A 701 1555 1555 3.09 LINK OD1 ASP A 58 CA CA A 784 1555 1555 3.06 LINK OE2 GLU A 68 CA CA A 701 1555 1555 2.70 LINK OE1 GLU A 68 CA CA A 784 1555 1555 2.97 LINK OE2 GLU A 68 CA CA A 784 1555 1555 3.22 LINK O LEU A 69 CA CA A 701 1555 1555 2.39 LINK CA CA A 701 O HOH A 847 1555 1555 2.80 LINK O GLU B 55 CA CA B 725 1555 1555 3.35 LINK O GLY B 56 CA CA B 725 1555 1555 2.35 LINK OD2 ASP B 58 CA CA B 725 1555 1555 3.31 LINK OD1 ASP B 58 CA CA B 725 1555 1555 2.79 LINK OD2 ASP B 58 CA CA B 761 1555 1555 2.58 LINK OE2 GLU B 68 CA CA B 725 1555 1555 2.87 LINK OE1 GLU B 68 CA CA B 725 1555 1555 2.72 LINK OE2 GLU B 68 CA CA B 761 1555 1555 2.39 LINK O LEU B 69 CA CA B 761 1555 1555 2.28 LINK CA CA B 761 O HOH B 762 1555 1555 2.45 SITE 1 AC1 6 ASP A 58 GLU A 68 LEU A 69 LYS A 70 SITE 2 AC1 6 HOH A 847 DC D 9 SITE 1 AC2 7 GLU B 55 GLY B 56 ASP B 58 GLU B 68 SITE 2 AC2 7 CA B 761 DC C 9 HOH C1028 SITE 1 AC3 7 ASP B 58 GLU B 68 LEU B 69 CA B 725 SITE 2 AC3 7 HOH B 762 DC C 9 HOH C 898 SITE 1 AC4 6 GLY A 56 ASP A 58 GLU A 68 DG D 8 SITE 2 AC4 6 DC D 9 HOH D 981 CRYST1 94.043 84.702 45.993 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010633 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021742 0.00000